Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0449860 | XP_024633807.1 | 82.787 | 244 | 8 | 3 | 7 | 217 | 13 | 255 | 1.32e-137 | 395 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0449860 | sp|Q9BUU2|MET22_HUMAN | 32.520 | 123 | 79 | 2 | 31 | 152 | 153 | 272 | 8.41e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0449860 | A0A2Z6M6Y1 | 75.099 | 253 | 27 | 3 | 1 | 217 | 1 | 253 | 9.82e-125 | 362 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0208090 | Msa0449860 | 0.800197 | 1.613443e-48 | -8.615850e-47 |
| Msa0449860 | Msa0608620 | 0.800293 | 1.542596e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0449860 | MtrunA17_Chr3g0093921 | 89.418 | 189 | 17 | 2 | 7 | 195 | 13 | 198 | 4.43e-122 | 344 |
| Msa0449860 | MtrunA17_Chr3g0093941 | 66.667 | 66 | 22 | 0 | 152 | 217 | 40 | 105 | 6.13e-22 | 86.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0449860 | AT2G26810.2 | 54.978 | 231 | 69 | 4 | 20 | 217 | 20 | 248 | 8.70e-83 | 247 |
| Msa0449860 | AT2G26810.1 | 54.978 | 231 | 69 | 4 | 20 | 217 | 20 | 248 | 8.70e-83 | 247 |
| Msa0449860 | AT2G26810.3 | 64.242 | 165 | 57 | 2 | 20 | 184 | 20 | 182 | 3.99e-75 | 226 |
| Msa0449860 | AT2G26810.7 | 64.242 | 165 | 57 | 2 | 20 | 184 | 20 | 182 | 3.99e-75 | 226 |
| Msa0449860 | AT2G26810.4 | 64.242 | 165 | 57 | 2 | 20 | 184 | 20 | 182 | 3.99e-75 | 226 |
| Msa0449860 | AT2G26810.6 | 61.783 | 157 | 59 | 1 | 28 | 184 | 35 | 190 | 4.02e-68 | 208 |
| Msa0449860 | AT2G26810.5 | 61.783 | 157 | 59 | 1 | 28 | 184 | 35 | 190 | 4.02e-68 | 208 |
Find 66 sgRNAs with CRISPR-Local
Find 563 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGAGACCAATTTGAGAATT+TGG | 0.168755 | 3_3:+34798940 | None:intergenic |
| CCAACAATACACTTTGTTTC+AGG | 0.207273 | 3_3:+34791533 | None:intergenic |
| TCTTGAAAATCGTAAGTAAT+TGG | 0.217096 | 3_3:+34791203 | None:intergenic |
| GGAGGTTTCGACTTCGTTCT+TGG | 0.242993 | 3_3:-34793249 | Msa0449860:CDS |
| GGTTGCACTGCTATTGAATT+AGG | 0.248895 | 3_3:-34796962 | Msa0449860:CDS |
| TTCTATGCCATGTTTGCTTC+TGG | 0.250855 | 3_3:+34791442 | None:intergenic |
| CCTTAAGCACTTCTTCATTA+TGG | 0.260054 | 3_3:+34793549 | None:intergenic |
| GGATTATTAAATACATAATA+AGG | 0.291772 | 3_3:+34793211 | None:intergenic |
| TTTGTACCAAATTCTCAAAT+TGG | 0.315744 | 3_3:-34798946 | Msa0449860:five_prime_UTR |
| TTGAGCATTGGCTAGTGTTT+TGG | 0.319306 | 3_3:-34791400 | Msa0449860:three_prime_UTR |
| GTTTGAGTAAATCATCAAAT+TGG | 0.320593 | 3_3:+34798820 | None:intergenic |
| AAAACATGTTGAGATGTTTC+AGG | 0.320727 | 3_3:-34796984 | Msa0449860:CDS |
| CTTTGAATCACAGGTATTAC+CGG | 0.354880 | 3_3:-34793614 | Msa0449860:intron |
| AGAAATCCATGGGTTTGATA+TGG | 0.355533 | 3_3:-34791308 | Msa0449860:three_prime_UTR |
| ATTGTGTTTCTACCTCAAAT+TGG | 0.371107 | 3_3:+34798845 | None:intergenic |
| CAGCTTACGGAATTCACATT+TGG | 0.383218 | 3_3:-34798522 | Msa0449860:CDS |
| AATATTAGTCCTACTTCTAA+TGG | 0.385228 | 3_3:-34793413 | Msa0449860:intron |
| CATTAAATTAATATAGTTTG+AGG | 0.390009 | 3_3:-34791468 | Msa0449860:three_prime_UTR |
| GAATCTGTGGCAAAGTATTC+CGG | 0.397864 | 3_3:+34793595 | None:intergenic |
| AAAGACAGGGACTAATTTGA+TGG | 0.408105 | 3_3:+34798966 | None:intergenic |
| ATTTGACAGGGCAGCTGGTA+TGG | 0.413020 | 3_3:-34797039 | Msa0449860:CDS |
| TTTCTCTTTCTACGACGCTT+TGG | 0.413908 | 3_3:+34798709 | None:intergenic |
| TGAGAATTTGGTACAAAGAC+AGG | 0.425460 | 3_3:+34798952 | None:intergenic |
| TCAGCTGACTTTGATTTGAC+AGG | 0.429318 | 3_3:-34797052 | Msa0449860:intron |
| CTTTGATTTGACAGGGCAGC+TGG | 0.433935 | 3_3:-34797044 | Msa0449860:CDS |
| AGTTATTAGCAGAGTCGGTC+AGG | 0.434450 | 3_3:-34798869 | Msa0449860:five_prime_UTR |
| ACAGGGCAGCTGGTATGGCC+TGG | 0.443321 | 3_3:-34797034 | Msa0449860:CDS |
| AAAGAGACTATGAAAGAAAG+AGG | 0.457957 | 3_3:+34798779 | None:intergenic |
| AATTTGAAGTTACCAGCTTA+CGG | 0.460727 | 3_3:-34798535 | Msa0449860:intron |
| GACAAATTGATATGAATGAT+TGG | 0.474141 | 3_3:-34791182 | Msa0449860:three_prime_UTR |
| AAACATGTTGAGATGTTTCA+GGG | 0.475930 | 3_3:-34796983 | Msa0449860:CDS |
| CCTGAAACAAAGTGTATTGT+TGG | 0.477583 | 3_3:-34791533 | Msa0449860:CDS |
| ACTGCTATTGAATTAGGTTC+TGG | 0.483380 | 3_3:-34796956 | Msa0449860:CDS |
| AGTAGCAGAGAAACTAGAAT+GGG | 0.487344 | 3_3:-34793313 | Msa0449860:CDS |
| CCATAATGAAGAAGTGCTTA+AGG | 0.488107 | 3_3:-34793549 | Msa0449860:intron |
| AGAAAACAAAGGATTGCAAA+AGG | 0.496450 | 3_3:-34798691 | Msa0449860:CDS |
| GAAGTAGGACTAATATTCTC+AGG | 0.508688 | 3_3:+34793419 | None:intergenic |
| TAAGTTTCAGATGCAGATGA+AGG | 0.509468 | 3_3:-34791561 | Msa0449860:CDS |
| TCATTCAGCAACATGGCTCC+AGG | 0.509855 | 3_3:+34797016 | None:intergenic |
| ATTGAATTAGGTTCTGGTGT+TGG | 0.509964 | 3_3:-34796950 | Msa0449860:intron |
| ATTTCTAACTTCTGTAAACA+AGG | 0.515003 | 3_3:+34798741 | None:intergenic |
| CTGCAATGATTGACAAGGGT+AGG | 0.523374 | 3_3:+34791353 | None:intergenic |
| CAGCTGACTTTGATTTGACA+GGG | 0.526873 | 3_3:-34797051 | Msa0449860:CDS |
| ATTTACTCACCATTAGAAGT+AGG | 0.527615 | 3_3:+34793404 | None:intergenic |
| AGAACGAAGTCGAAACCTCC+AGG | 0.535558 | 3_3:+34793252 | None:intergenic |
| AGTCGGTCAGGACCAATTTG+AGG | 0.538782 | 3_3:-34798857 | Msa0449860:five_prime_UTR |
| CAAATTTATTGCAGAATCTG+TGG | 0.541814 | 3_3:+34793582 | None:intergenic |
| AACTGATCTGACTTGAGCAT+TGG | 0.542410 | 3_3:-34791412 | Msa0449860:three_prime_UTR |
| AAGAGACTATGAAAGAAAGA+GGG | 0.547892 | 3_3:+34798780 | None:intergenic |
| CAAATGTGAATTCCGTAAGC+TGG | 0.548815 | 3_3:+34798523 | None:intergenic |
| GAGGTTTCCAGAAGCAAACA+TGG | 0.549638 | 3_3:-34791449 | Msa0449860:three_prime_UTR |
| AGGATTGCAAAAGGAAGAAG+AGG | 0.555089 | 3_3:-34798682 | Msa0449860:CDS |
| TAGTAGCAGAGAAACTAGAA+TGG | 0.557861 | 3_3:-34793314 | Msa0449860:CDS |
| CTGAAACAAAGTGTATTGTT+GGG | 0.571235 | 3_3:-34791532 | Msa0449860:CDS |
| GAGAATTTGGTACAAAGACA+GGG | 0.608933 | 3_3:+34798953 | None:intergenic |
| CAGATGACTCGAGAAATCCA+TGG | 0.610988 | 3_3:-34791319 | Msa0449860:three_prime_UTR |
| TGTATTGTTGGGAATCATGA+AGG | 0.613190 | 3_3:-34791521 | Msa0449860:CDS |
| TTTCTAACTTCTGTAAACAA+GGG | 0.615345 | 3_3:+34798742 | None:intergenic |
| TGCAATGATTGACAAGGGTA+GGG | 0.621777 | 3_3:+34791354 | None:intergenic |
| TAGATAATCATTCAGCAACA+TGG | 0.625311 | 3_3:+34797009 | None:intergenic |
| AGATGACTCGAGAAATCCAT+GGG | 0.643573 | 3_3:-34791318 | Msa0449860:three_prime_UTR |
| AATGAAACGACGTGACATGA+AGG | 0.665055 | 3_3:-34799012 | Msa0449860:five_prime_UTR |
| GTTGTCTGCAATGATTGACA+AGG | 0.677902 | 3_3:+34791348 | None:intergenic |
| GTCGTAGAAAGAGAAAACAA+AGG | 0.692171 | 3_3:-34798702 | Msa0449860:CDS |
| GTAGCAGAGAAACTAGAATG+GGG | 0.707858 | 3_3:-34793312 | Msa0449860:CDS |
| TTGTCTGCAATGATTGACAA+GGG | 0.756598 | 3_3:+34791349 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATA+GGG | + | chr3_3:34794882-34794901 | None:intergenic | 0.0% |
| !! | ATATATATATATATATATAT+AGG | + | chr3_3:34794883-34794902 | None:intergenic | 0.0% |
| !!! | GATAGTATTTTATTTTTATT+TGG | + | chr3_3:34791930-34791949 | None:intergenic | 10.0% |
| !!! | TTCTTTTGAATTAAATTATT+GGG | + | chr3_3:34793433-34793452 | None:intergenic | 10.0% |
| !!! | ATTCTTTTGAATTAAATTAT+TGG | + | chr3_3:34793434-34793453 | None:intergenic | 10.0% |
| !! | TTCTACTAAAAAAAAAAAAA+AGG | - | chr3_3:34793852-34793871 | Msa0449860:intron | 10.0% |
| !!! | TTTTTTATTTAGAACTTTAA+TGG | - | chr3_3:34794253-34794272 | Msa0449860:intron | 10.0% |
| !!! | TTGTTGATATTAATTTTATT+TGG | + | chr3_3:34797691-34797710 | None:intergenic | 10.0% |
| !! | AACATTATTTGCTTTATATT+GGG | - | chr3_3:34792486-34792505 | Msa0449860:intron | 15.0% |
| !!! | CTAGTTTTCATTTAAAAAAT+AGG | - | chr3_3:34794120-34794139 | Msa0449860:intron | 15.0% |
| !!! | ACTTTTTTTTTTATTGATCA+GGG | + | chr3_3:34794460-34794479 | None:intergenic | 15.0% |
| !!! | ATTTTTTATTTTAGAAGTTG+TGG | + | chr3_3:34795152-34795171 | None:intergenic | 15.0% |
| !! | TAAATCTATTATTTGAGAAA+TGG | + | chr3_3:34795809-34795828 | None:intergenic | 15.0% |
| !!! | AATTTTGTTATTTACTTCTA+CGG | + | chr3_3:34795848-34795867 | None:intergenic | 15.0% |
| !!! | AAATAAATTGAAGATTTTCA+AGG | + | chr3_3:34796053-34796072 | None:intergenic | 15.0% |
| !! | TATTTAAATCAAAATTCAGA+GGG | + | chr3_3:34796789-34796808 | None:intergenic | 15.0% |
| !! | ATATTTAAATCAAAATTCAG+AGG | + | chr3_3:34796790-34796809 | None:intergenic | 15.0% |
| !!! | TTTGATTTAAATATATATGC+AGG | - | chr3_3:34796796-34796815 | Msa0449860:intron | 15.0% |
| !! | GGATTATTAAATACATAATA+AGG | + | chr3_3:34796927-34796946 | None:intergenic | 15.0% |
| !! | TTGAAATATTGATATATTGA+GGG | + | chr3_3:34797108-34797127 | None:intergenic | 15.0% |
| !!! | TTTGAAATATTGATATATTG+AGG | + | chr3_3:34797109-34797128 | None:intergenic | 15.0% |
| !! | ACAATAAATAAGTACTTATA+AGG | + | chr3_3:34797241-34797260 | None:intergenic | 15.0% |
| !! | CATTAAATTAATATAGTTTG+AGG | - | chr3_3:34798667-34798686 | Msa0449860:CDS | 15.0% |
| !! | GAAATGTAAAAAAAACTTAC+TGG | + | chr3_3:34791677-34791696 | None:intergenic | 20.0% |
| !!! | GACAAAAAATGACTATTTTA+GGG | + | chr3_3:34792216-34792235 | None:intergenic | 20.0% |
| !!! | AGACAAAAAATGACTATTTT+AGG | + | chr3_3:34792217-34792236 | None:intergenic | 20.0% |
| !! | TTAAGAAGAATTAACAAGAT+AGG | + | chr3_3:34792322-34792341 | None:intergenic | 20.0% |
| !! | ATCTTGTTAATTCTTCTTAA+TGG | - | chr3_3:34792322-34792341 | Msa0449860:intron | 20.0% |
| !! | CAATATAAAGCAAATAATGT+TGG | + | chr3_3:34792487-34792506 | None:intergenic | 20.0% |
| !! | CAACATTATTTGCTTTATAT+TGG | - | chr3_3:34792485-34792504 | Msa0449860:intron | 20.0% |
| !!! | TTTTTGCTTTTTTATGTGTA+TGG | - | chr3_3:34792581-34792600 | Msa0449860:intron | 20.0% |
| !!! | TTTTGCTTTTTTATGTGTAT+GGG | - | chr3_3:34792582-34792601 | Msa0449860:intron | 20.0% |
| !! | ATATAATAACATACAAGACA+GGG | - | chr3_3:34792782-34792801 | Msa0449860:intron | 20.0% |
| !!! | CTGTATCTTATAGTTTTTTT+TGG | - | chr3_3:34793035-34793054 | Msa0449860:intron | 20.0% |
| !!! | GTTTATACTTTTTATGTTTG+TGG | - | chr3_3:34793244-34793263 | Msa0449860:CDS | 20.0% |
| !!! | TCCTAATTTTACAGATAAAA+AGG | - | chr3_3:34793292-34793311 | Msa0449860:CDS | 20.0% |
| !!! | TCCTTTTTATCTGTAAAATT+AGG | + | chr3_3:34793296-34793315 | None:intergenic | 20.0% |
| !!! | TAATTTTACAGATAAAAAGG+AGG | - | chr3_3:34793295-34793314 | Msa0449860:CDS | 20.0% |
| !!! | AATTTTACAGATAAAAAGGA+GGG | - | chr3_3:34793296-34793315 | Msa0449860:CDS | 20.0% |
| !! | GTAACTAAATTCCTAAAATA+AGG | + | chr3_3:34793356-34793375 | None:intergenic | 20.0% |
| !! | ACATATTATGATTACATGAT+AGG | + | chr3_3:34793404-34793423 | None:intergenic | 20.0% |
| !! | TCATGTAATCATAATATGTT+AGG | - | chr3_3:34793405-34793424 | Msa0449860:intron | 20.0% |
| !! | TTGAGAAAATAAGAAAGAAT+AGG | - | chr3_3:34793473-34793492 | Msa0449860:intron | 20.0% |
| !! | TGAGAAAATAAGAAAGAATA+GGG | - | chr3_3:34793474-34793493 | Msa0449860:intron | 20.0% |
| !!! | AAATGGATTTTGTTTAGAAA+TGG | - | chr3_3:34793940-34793959 | Msa0449860:intron | 20.0% |
| !!! | AACCAATTTTTTATGTAATC+TGG | - | chr3_3:34793968-34793987 | Msa0449860:intron | 20.0% |
| !! | AACCAGATTACATAAAAAAT+TGG | + | chr3_3:34793973-34793992 | None:intergenic | 20.0% |
| !! | AAAAAACTGATATTGAAAAC+CGG | + | chr3_3:34794020-34794039 | None:intergenic | 20.0% |
| !! | CTATTAACCAGTTTAATTAA+CGG | - | chr3_3:34794044-34794063 | Msa0449860:intron | 20.0% |
| !! | CTAAAAACTAATATTACATG+TGG | - | chr3_3:34794304-34794323 | Msa0449860:intron | 20.0% |
| !!! | CACTTTTTTTTTTATTGATC+AGG | + | chr3_3:34794461-34794480 | None:intergenic | 20.0% |
| !!! | TTACTGATTTGTATACATTT+CGG | + | chr3_3:34794495-34794514 | None:intergenic | 20.0% |
| !! | AAATGTATACAAATCAGTAA+GGG | - | chr3_3:34794495-34794514 | Msa0449860:intron | 20.0% |
| !! | TATGTTAAATAGAGTCTAAT+TGG | - | chr3_3:34794647-34794666 | Msa0449860:intron | 20.0% |
| !! | ATGTCATGAACAAAATATAT+TGG | - | chr3_3:34794686-34794705 | Msa0449860:intron | 20.0% |
| !! | TGTCATGAACAAAATATATT+GGG | - | chr3_3:34794687-34794706 | Msa0449860:intron | 20.0% |
| !!! | TTTTTTTTTGGAATAATGTG+TGG | + | chr3_3:34795036-34795055 | None:intergenic | 20.0% |
| !!! | TGCGTGATTTTTTTTTTTTT+TGG | + | chr3_3:34795048-34795067 | None:intergenic | 20.0% |
| !! | TAAATCGTGGATAAAAAAAT+TGG | - | chr3_3:34795229-34795248 | Msa0449860:intron | 20.0% |
| !! | ATAAAAATGGTCAAAGAAAA+TGG | - | chr3_3:34795417-34795436 | Msa0449860:intron | 20.0% |
| !! | TAAAAATGGTCAAAGAAAAT+GGG | - | chr3_3:34795418-34795437 | Msa0449860:intron | 20.0% |
| !!! | TGTGTTTTTTTGTTTTTGTT+TGG | - | chr3_3:34795562-34795581 | Msa0449860:intron | 20.0% |
| !! | TAAGGAAAACCTATATATAT+GGG | + | chr3_3:34795719-34795738 | None:intergenic | 20.0% |
| !!! | TACAAAACAATTAGTTCTTT+TGG | + | chr3_3:34796187-34796206 | None:intergenic | 20.0% |
| !!! | GTGGTATAATATTGTATTTT+TGG | - | chr3_3:34796356-34796375 | Msa0449860:intron | 20.0% |
| !!! | GATGTTTTTGTAAAATTTCA+TGG | + | chr3_3:34796864-34796883 | None:intergenic | 20.0% |
| !! | TTGTAATGTTAGATATCAAT+GGG | + | chr3_3:34796948-34796967 | None:intergenic | 20.0% |
| !!! | TAACGAAATATTTTAATGTC+AGG | + | chr3_3:34797170-34797189 | None:intergenic | 20.0% |
| !! | ACAATAAGTAAGTATATTGA+AGG | + | chr3_3:34797209-34797228 | None:intergenic | 20.0% |
| !!! | TTGTAATTTTGATACATTGA+AGG | - | chr3_3:34797361-34797380 | Msa0449860:intron | 20.0% |
| !!! | AGTTCATTTTAGCAAATAAT+TGG | + | chr3_3:34797540-34797559 | None:intergenic | 20.0% |
| !!! | AATTTTTGTTTATCTCTTCT+TGG | - | chr3_3:34797867-34797886 | Msa0449860:intron | 20.0% |
| !!! | CTGTAGTTCATTATATTTTT+GGG | - | chr3_3:34798121-34798140 | Msa0449860:intron | 20.0% |
| !! | AACGAAAAATGATTCATATA+TGG | - | chr3_3:34798186-34798205 | Msa0449860:intron | 20.0% |
| !!! | AATGTATTTTTCATTGTGTA+AGG | - | chr3_3:34798900-34798919 | Msa0449860:five_prime_UTR | 20.0% |
| ! | TTTGTACCAAATTCTCAAAT+TGG | - | chr3_3:34791189-34791208 | Msa0449860:three_prime_UTR | 25.0% |
| ! | GTTTGAGTAAATCATCAAAT+TGG | + | chr3_3:34791318-34791337 | None:intergenic | 25.0% |
| ! | TTTCTAACTTCTGTAAACAA+GGG | + | chr3_3:34791396-34791415 | None:intergenic | 25.0% |
| ! | ATTTCTAACTTCTGTAAACA+AGG | + | chr3_3:34791397-34791416 | None:intergenic | 25.0% |
| ! | ATAGCTTAAGAAAAGTAACT+GGG | + | chr3_3:34791952-34791971 | None:intergenic | 25.0% |
| ! | AATAGCTTAAGAAAAGTAAC+TGG | + | chr3_3:34791953-34791972 | None:intergenic | 25.0% |
| ! | TGAACATTTACCCTAAATTT+CGG | - | chr3_3:34792274-34792293 | Msa0449860:intron | 25.0% |
| !!! | CCAAGTAAATTTTATTTCCT+TGG | + | chr3_3:34792737-34792756 | None:intergenic | 25.0% |
| ! | CCAAGGAAATAAAATTTACT+TGG | - | chr3_3:34792734-34792753 | Msa0449860:intron | 25.0% |
| ! | GTCTTGTATGTTATTATATC+AGG | + | chr3_3:34792781-34792800 | None:intergenic | 25.0% |
| ! | GATATAATAACATACAAGAC+AGG | - | chr3_3:34792781-34792800 | Msa0449860:intron | 25.0% |
| ! | TTCATAACTGCAAATCAATT+GGG | + | chr3_3:34792816-34792835 | None:intergenic | 25.0% |
| ! | ATTCATAACTGCAAATCAAT+TGG | + | chr3_3:34792817-34792836 | None:intergenic | 25.0% |
| ! | AAGTTTATATAAAAGCTTCC+AGG | + | chr3_3:34792962-34792981 | None:intergenic | 25.0% |
| !! | ATTTTCTGTGTCTTTATAAC+TGG | - | chr3_3:34792993-34793012 | Msa0449860:intron | 25.0% |
| ! | ATACAGAAAGCAAAAAATCA+AGG | + | chr3_3:34793021-34793040 | None:intergenic | 25.0% |
| !!! | GTAAAATTAGGAGCATTTTA+AGG | + | chr3_3:34793284-34793303 | None:intergenic | 25.0% |
| !!! | GCACAATATTACCTTATTTT+AGG | - | chr3_3:34793342-34793361 | Msa0449860:intron | 25.0% |
| ! | TAATGACTCTATTGAAAAAG+GGG | + | chr3_3:34793525-34793544 | None:intergenic | 25.0% |
| ! | GTAATGACTCTATTGAAAAA+GGG | + | chr3_3:34793526-34793545 | None:intergenic | 25.0% |
| ! | AGTAATGACTCTATTGAAAA+AGG | + | chr3_3:34793527-34793546 | None:intergenic | 25.0% |
| ! | TATAGGATTAGGAGTTAATT+GGG | + | chr3_3:34793637-34793656 | None:intergenic | 25.0% |
| ! | ATATAGGATTAGGAGTTAAT+TGG | + | chr3_3:34793638-34793657 | None:intergenic | 25.0% |
| ! | TTGTTAGGATTTGAATTGTT+TGG | + | chr3_3:34793687-34793706 | None:intergenic | 25.0% |
| !!! | TAAACAGGTTTGTTTCATTT+TGG | + | chr3_3:34793823-34793842 | None:intergenic | 25.0% |
| ! | AAATGAAACAAACCTGTTTA+TGG | - | chr3_3:34793823-34793842 | Msa0449860:intron | 25.0% |
| !!! | TGTAATCTGGTTTTCAAAAA+TGG | - | chr3_3:34793981-34794000 | Msa0449860:intron | 25.0% |
| ! | TTGAAACTGGTTATTTAAAC+TGG | + | chr3_3:34794083-34794102 | None:intergenic | 25.0% |
| !! | CATAAAAGTAGTATTGAAAC+TGG | + | chr3_3:34794096-34794115 | None:intergenic | 25.0% |
| !!! | TTTCTAAACCAGTTTTAAAC+TGG | - | chr3_3:34794148-34794167 | Msa0449860:intron | 25.0% |
| ! | ATCATTTGTACAAAACAGAA+GGG | + | chr3_3:34794213-34794232 | None:intergenic | 25.0% |
| ! | AATCATTTGTACAAAACAGA+AGG | + | chr3_3:34794214-34794233 | None:intergenic | 25.0% |
| !!! | TAGCACATATTGCTTTTATA+AGG | - | chr3_3:34794362-34794381 | Msa0449860:intron | 25.0% |
| !!! | TACTGATTTGTATACATTTC+GGG | + | chr3_3:34794494-34794513 | None:intergenic | 25.0% |
| ! | GAAATGTATACAAATCAGTA+AGG | - | chr3_3:34794494-34794513 | Msa0449860:intron | 25.0% |
| ! | ATTTGTGATTTATGGTAACA+AGG | + | chr3_3:34794550-34794569 | None:intergenic | 25.0% |
| !!! | AGTTTTCGATTTGTGATTTA+TGG | + | chr3_3:34794558-34794577 | None:intergenic | 25.0% |
| ! | GTCATGAACAAAATATATTG+GGG | - | chr3_3:34794688-34794707 | Msa0449860:intron | 25.0% |
| ! | AAAAAAAAAATCACGCAAAC+TGG | - | chr3_3:34795051-34795070 | Msa0449860:intron | 25.0% |
| !!! | GTTTTAGATTATGATGCAAA+CGG | - | chr3_3:34795255-34795274 | Msa0449860:intron | 25.0% |
| ! | TTGGATAAAAATACACAGAT+CGG | + | chr3_3:34795637-34795656 | None:intergenic | 25.0% |
| !!! | ATCTGTGTATTTTTATCCAA+TGG | - | chr3_3:34795637-34795656 | Msa0449860:intron | 25.0% |
| ! | GTAAGGAAAACCTATATATA+TGG | + | chr3_3:34795720-34795739 | None:intergenic | 25.0% |
| ! | TACAAAACATGAAATCTTGT+AGG | - | chr3_3:34795941-34795960 | Msa0449860:intron | 25.0% |
| !! | TTTTGGTCTCTAAGTTATAT+TGG | + | chr3_3:34796170-34796189 | None:intergenic | 25.0% |
| !!! | AAGAACTAATTGTTTTGTAC+TGG | - | chr3_3:34796188-34796207 | Msa0449860:intron | 25.0% |
| ! | AATATTAGTCCTACTTCTAA+TGG | - | chr3_3:34796722-34796741 | Msa0449860:intron | 25.0% |
| !! | GAAATTTTACAAAAACATCC+TGG | - | chr3_3:34796865-34796884 | Msa0449860:intron | 25.0% |
| ! | GTTGTAATGTTAGATATCAA+TGG | + | chr3_3:34796949-34796968 | None:intergenic | 25.0% |
| !! | TTAAATGCCTAAAAGTATGA+TGG | - | chr3_3:34796974-34796993 | Msa0449860:CDS | 25.0% |
| !! | ACAATAACCCTTTTCATATA+GGG | + | chr3_3:34797273-34797292 | None:intergenic | 25.0% |
| !! | TATTTGCTAAAATGAACTAG+AGG | - | chr3_3:34797542-34797561 | Msa0449860:intron | 25.0% |
| !!! | GATTTATAAAACTTGTTGCA+AGG | + | chr3_3:34798037-34798056 | None:intergenic | 25.0% |
| !! | TGCAATGAAGAACTTAATTT+TGG | + | chr3_3:34798100-34798119 | None:intergenic | 25.0% |
| !! | GCTGTAGTTCATTATATTTT+TGG | - | chr3_3:34798120-34798139 | Msa0449860:intron | 25.0% |
| !!! | TTCATTATATTTTTGGGACT+TGG | - | chr3_3:34798127-34798146 | Msa0449860:intron | 25.0% |
| !!! | CACTTATTTTTTCATGAGAT+TGG | - | chr3_3:34798333-34798352 | Msa0449860:intron | 25.0% |
| !! | TTAAAAAGTGTGAGCTTATT+CGG | - | chr3_3:34798360-34798379 | Msa0449860:intron | 25.0% |
| ! | TCTTGAAAATCGTAAGTAAT+TGG | + | chr3_3:34798935-34798954 | None:intergenic | 25.0% |
| ! | GACAAATTGATATGAATGAT+TGG | - | chr3_3:34798953-34798972 | Msa0449860:five_prime_UTR | 25.0% |
| !!! | TTTTGAGTTATTAGCAGAGT+CGG | - | chr3_3:34791261-34791280 | Msa0449860:three_prime_UTR | 30.0% |
| ! | ATTGTGTTTCTACCTCAAAT+TGG | + | chr3_3:34791293-34791312 | None:intergenic | 30.0% |
| AAGAGACTATGAAAGAAAGA+GGG | + | chr3_3:34791358-34791377 | None:intergenic | 30.0% | |
| AAAGAGACTATGAAAGAAAG+AGG | + | chr3_3:34791359-34791378 | None:intergenic | 30.0% | |
| AGAAAACAAAGGATTGCAAA+AGG | - | chr3_3:34791444-34791463 | Msa0449860:three_prime_UTR | 30.0% | |
| ! | CTGTAATGATTGATCTTTTC+TGG | - | chr3_3:34791572-34791591 | Msa0449860:CDS | 30.0% |
| ! | AATTTGAAGTTACCAGCTTA+CGG | - | chr3_3:34791600-34791619 | Msa0449860:intron | 30.0% |
| ! | CTTTTCGTATATCGAAACTT+AGG | + | chr3_3:34791729-34791748 | None:intergenic | 30.0% |
| GTAGAAGAACAATTATTGGT+CGG | - | chr3_3:34791856-34791875 | Msa0449860:intron | 30.0% | |
| TGTATATCCAATCACTTCAA+AGG | + | chr3_3:34791976-34791995 | None:intergenic | 30.0% | |
| ! | TTGTAATAGTGTCACTATGA+CGG | + | chr3_3:34792161-34792180 | None:intergenic | 30.0% |
| TGTTGTCATTCCGAAATTTA+GGG | + | chr3_3:34792287-34792306 | None:intergenic | 30.0% | |
| TTGTTGTCATTCCGAAATTT+AGG | + | chr3_3:34792288-34792307 | None:intergenic | 30.0% | |
| AAGAATTAACAAGATAGGAG+GGG | + | chr3_3:34792317-34792336 | None:intergenic | 30.0% | |
| GAAGAATTAACAAGATAGGA+GGG | + | chr3_3:34792318-34792337 | None:intergenic | 30.0% | |
| AGAAGAATTAACAAGATAGG+AGG | + | chr3_3:34792319-34792338 | None:intergenic | 30.0% | |
| AAATATATGTGATTCCTCCA+AGG | + | chr3_3:34792418-34792437 | None:intergenic | 30.0% | |
| !!! | GATAAGCTATTTTGAAACCT+TGG | - | chr3_3:34792452-34792471 | Msa0449860:intron | 30.0% |
| !!! | CTTTTTTATGTGTATGGGTA+TGG | - | chr3_3:34792587-34792606 | Msa0449860:intron | 30.0% |
| TTGCTTAGACATTACTATTG+CGG | + | chr3_3:34792673-34792692 | None:intergenic | 30.0% | |
| TAGTAATGTCTAAGCAAATG+AGG | - | chr3_3:34792676-34792695 | Msa0449860:intron | 30.0% | |
| AGTAATGTCTAAGCAAATGA+GGG | - | chr3_3:34792677-34792696 | Msa0449860:intron | 30.0% | |
| !!! | CATAGTGAACAGTTTTAGTT+TGG | + | chr3_3:34792709-34792728 | None:intergenic | 30.0% |
| TAGATAATCATTCAGCAACA+TGG | + | chr3_3:34793129-34793148 | None:intergenic | 30.0% | |
| AAAACATGTTGAGATGTTTC+AGG | - | chr3_3:34793151-34793170 | Msa0449860:intron | 30.0% | |
| AAACATGTTGAGATGTTTCA+GGG | - | chr3_3:34793152-34793171 | Msa0449860:intron | 30.0% | |
| ! | CTTATCTTCCAAAGTATTAC+TGG | - | chr3_3:34793375-34793394 | Msa0449860:intron | 30.0% |
| ATAGGTTTCCAGTAATACTT+TGG | + | chr3_3:34793386-34793405 | None:intergenic | 30.0% | |
| AATGACTCTATTGAAAAAGG+GGG | + | chr3_3:34793524-34793543 | None:intergenic | 30.0% | |
| ATAGGATTAGGAGTTAATTG+GGG | + | chr3_3:34793636-34793655 | None:intergenic | 30.0% | |
| GATGGTAACAATATAGGATT+AGG | + | chr3_3:34793648-34793667 | None:intergenic | 30.0% | |
| AGAAGAGATGGTAACAATAT+AGG | + | chr3_3:34793654-34793673 | None:intergenic | 30.0% | |
| GGATTTGAATTGTTTGGATT+TGG | + | chr3_3:34793681-34793700 | None:intergenic | 30.0% | |
| TGTGTGATTATGTTAGGATA+AGG | + | chr3_3:34793716-34793735 | None:intergenic | 30.0% | |
| ! | GTTTAAAACGAGTCTGAAAA+TGG | - | chr3_3:34793923-34793942 | Msa0449860:intron | 30.0% |
| AAATGGTTTATGCTTCAATC+CGG | - | chr3_3:34793998-34794017 | Msa0449860:intron | 30.0% | |
| TCATTTGTACAAAACAGAAG+GGG | + | chr3_3:34794212-34794231 | None:intergenic | 30.0% | |
| TAATATTACATGTGGCATGT+TGG | - | chr3_3:34794312-34794331 | Msa0449860:intron | 30.0% | |
| !! | GGTTGTTATTTCTGAAAATG+TGG | + | chr3_3:34794389-34794408 | None:intergenic | 30.0% |
| ! | AAACTGCCTTAATTTTTCTG+AGG | - | chr3_3:34794573-34794592 | Msa0449860:intron | 30.0% |
| TTAGCTCCTCAGAAAAATTA+AGG | + | chr3_3:34794582-34794601 | None:intergenic | 30.0% | |
| GACATATCAATATCAACCAT+CGG | - | chr3_3:34794956-34794975 | Msa0449860:intron | 30.0% | |
| AACCATCGGATATAAATACA+CGG | - | chr3_3:34794970-34794989 | Msa0449860:intron | 30.0% | |
| TTAGAAGTTGTGGTTTCAAA+CGG | + | chr3_3:34795142-34795161 | None:intergenic | 30.0% | |
| ! | TCAATTCGTAGGTTGAAAAT+TGG | - | chr3_3:34795205-34795224 | Msa0449860:intron | 30.0% |
| ! | CAATTCGTAGGTTGAAAATT+GGG | - | chr3_3:34795206-34795225 | Msa0449860:intron | 30.0% |
| AAGAGAAACCAATACAAAAG+AGG | - | chr3_3:34795442-34795461 | Msa0449860:intron | 30.0% | |
| ! | TTTGTTTGGAATAATGTGTG+TGG | - | chr3_3:34795576-34795595 | Msa0449860:intron | 30.0% |
| GTGTCTGAATTCAAAGAAAT+TGG | - | chr3_3:34795988-34796007 | Msa0449860:intron | 30.0% | |
| TTCAAAGAAATTGGACAGTT+TGG | - | chr3_3:34795997-34796016 | Msa0449860:intron | 30.0% | |
| TCTATGCATTTGATAAGGAA+GGG | + | chr3_3:34796130-34796149 | None:intergenic | 30.0% | |
| !! | ACTAATTGTTTTGTACTGGT+TGG | - | chr3_3:34796192-34796211 | Msa0449860:intron | 30.0% |
| TACTGTTCTATACACTTGAT+CGG | - | chr3_3:34796222-34796241 | Msa0449860:intron | 30.0% | |
| GCAAACTATAAACAGAAAAC+TGG | + | chr3_3:34796309-34796328 | None:intergenic | 30.0% | |
| ATTGAGATCTTACCTAAGAT+AGG | + | chr3_3:34796435-34796454 | None:intergenic | 30.0% | |
| GTCTAATGTCATACAGAATA+AGG | + | chr3_3:34796478-34796497 | None:intergenic | 30.0% | |
| ! | TATTTCTTGCTTTGAATCAC+AGG | - | chr3_3:34796512-34796531 | Msa0449860:intron | 30.0% |
| CAAATTTATTGCAGAATCTG+TGG | + | chr3_3:34796556-34796575 | None:intergenic | 30.0% | |
| TTAGACCACATAGAATAATC+AGG | + | chr3_3:34796644-34796663 | None:intergenic | 30.0% | |
| ! | TTTCTTTATGATCTGAGATG+AGG | + | chr3_3:34796675-34796694 | None:intergenic | 30.0% |
| ATTTACTCACCATTAGAAGT+AGG | + | chr3_3:34796734-34796753 | None:intergenic | 30.0% | |
| ! | ATTTTACAAAAACATCCTGG+AGG | - | chr3_3:34796868-34796887 | Msa0449860:intron | 30.0% |
| TACATAGATACTGATAAAGC+TGG | - | chr3_3:34797014-34797033 | Msa0449860:CDS | 30.0% | |
| TGGTTCTTCATATAGATCTT+TGG | - | chr3_3:34797034-34797053 | Msa0449860:CDS | 30.0% | |
| GGTTCTTCATATAGATCTTT+GGG | - | chr3_3:34797035-34797054 | Msa0449860:CDS | 30.0% | |
| GTTCTTCATATAGATCTTTG+GGG | - | chr3_3:34797036-34797055 | Msa0449860:CDS | 30.0% | |
| ATTTCAGTCCCTATATGAAA+AGG | - | chr3_3:34797262-34797281 | Msa0449860:intron | 30.0% | |
| TTTCAGTCCCTATATGAAAA+GGG | - | chr3_3:34797263-34797282 | Msa0449860:intron | 30.0% | |
| ! | CACAATAACCCTTTTCATAT+AGG | + | chr3_3:34797274-34797293 | None:intergenic | 30.0% |
| ! | ATAACCTTCTAAAGATCTAC+GGG | + | chr3_3:34797435-34797454 | None:intergenic | 30.0% |
| ! | GATAACCTTCTAAAGATCTA+CGG | + | chr3_3:34797436-34797455 | None:intergenic | 30.0% |
| !! | ACTAGCAAAGGCTTTAAAAT+AGG | + | chr3_3:34797492-34797511 | None:intergenic | 30.0% |
| CATTATCATCTCATAGTTGA+TGG | - | chr3_3:34797926-34797945 | Msa0449860:intron | 30.0% | |
| AGATAGCAATAGATAGTAGT+GGG | - | chr3_3:34797973-34797992 | Msa0449860:intron | 30.0% | |
| !! | GTTTCCAAATCATTTTAGTG+TGG | - | chr3_3:34798073-34798092 | Msa0449860:intron | 30.0% |
| CTGATTAAATAATACTCCTC+TGG | - | chr3_3:34798152-34798171 | Msa0449860:intron | 30.0% | |
| !! | ATTTTTGAAAGTGCACTTCA+TGG | + | chr3_3:34798312-34798331 | None:intergenic | 30.0% |
| AGTTGTAGGATTGAGTAATT+TGG | + | chr3_3:34798438-34798457 | None:intergenic | 30.0% | |
| TTACTCAATCCTACAACTTT+AGG | - | chr3_3:34798440-34798459 | Msa0449860:intron | 30.0% | |
| CTGAAACAAAGTGTATTGTT+GGG | - | chr3_3:34798603-34798622 | Msa0449860:intron | 30.0% | |
| ! | ACATTTTGCACACTACAAAT+AGG | + | chr3_3:34798885-34798904 | None:intergenic | 30.0% |
| ! | GTCTATATTCCAACTGTTTT+TGG | - | chr3_3:34798977-34798996 | Msa0449860:five_prime_UTR | 30.0% |
| TCAATCAATCCAAAAACAGT+TGG | + | chr3_3:34798989-34799008 | None:intergenic | 30.0% | |
| AAAGACAGGGACTAATTTGA+TGG | + | chr3_3:34791172-34791191 | None:intergenic | 35.0% | |
| GAGAATTTGGTACAAAGACA+GGG | + | chr3_3:34791185-34791204 | None:intergenic | 35.0% | |
| TGAGAATTTGGTACAAAGAC+AGG | + | chr3_3:34791186-34791205 | None:intergenic | 35.0% | |
| CAGAGACCAATTTGAGAATT+TGG | + | chr3_3:34791198-34791217 | None:intergenic | 35.0% | |
| GTCGTAGAAAGAGAAAACAA+AGG | - | chr3_3:34791433-34791452 | Msa0449860:three_prime_UTR | 35.0% | |
| ! | AAAAAGGTATAGAGAGAGAG+GGG | + | chr3_3:34791530-34791549 | None:intergenic | 35.0% |
| ! | GAAAAAGGTATAGAGAGAGA+GGG | + | chr3_3:34791531-34791550 | None:intergenic | 35.0% |
| ! | AGAAAAAGGTATAGAGAGAG+AGG | + | chr3_3:34791532-34791551 | None:intergenic | 35.0% |
| CAGTGACAGTGAAAAGAAAA+AGG | + | chr3_3:34791546-34791565 | None:intergenic | 35.0% | |
| TCCTAGCTAAGCAAATTGTT+TGG | - | chr3_3:34791764-34791783 | Msa0449860:intron | 35.0% | |
| ! | TCCAAACAATTTGCTTAGCT+AGG | + | chr3_3:34791768-34791787 | None:intergenic | 35.0% |
| GGAATTAAACTCAAGTTCTC+CGG | + | chr3_3:34791833-34791852 | None:intergenic | 35.0% | |
| GAGAACTTGAGTTTAATTCC+CGG | - | chr3_3:34791833-34791852 | Msa0449860:intron | 35.0% | |
| AGAACTTGAGTTTAATTCCC+GGG | - | chr3_3:34791834-34791853 | Msa0449860:intron | 35.0% | |
| CAATAATTGTTCTTCTACCC+GGG | + | chr3_3:34791854-34791873 | None:intergenic | 35.0% | |
| CCAATAATTGTTCTTCTACC+CGG | + | chr3_3:34791855-34791874 | None:intergenic | 35.0% | |
| ! | TTTATTTGGTGATAACCCTC+TGG | + | chr3_3:34791916-34791935 | None:intergenic | 35.0% |
| !! | AGCTATTCCTTTGAAGTGAT+TGG | - | chr3_3:34791966-34791985 | Msa0449860:intron | 35.0% |
| ATCTTAGCTAAGCAAGTGAT+TGG | - | chr3_3:34792015-34792034 | Msa0449860:intron | 35.0% | |
| AAGTGATTGGACGAATCATT+CGG | - | chr3_3:34792028-34792047 | Msa0449860:intron | 35.0% | |
| TGTTAACCCTATAGTTCCTA+GGG | + | chr3_3:34792080-34792099 | None:intergenic | 35.0% | |
| TATAGGGTTAACACGAATTG+CGG | - | chr3_3:34792087-34792106 | Msa0449860:intron | 35.0% | |
| TGTCTTCAACTTATTGCTAC+TGG | - | chr3_3:34792232-34792251 | Msa0449860:intron | 35.0% | |
| !!! | CTATTTTGAAACCTTGGAGT+TGG | - | chr3_3:34792458-34792477 | Msa0449860:intron | 35.0% |
| ! | CTGTTCACTATGTTTTACCA+AGG | - | chr3_3:34792717-34792736 | Msa0449860:intron | 35.0% |
| ATCAGGAAAACCTTTCAAAG+AGG | + | chr3_3:34792764-34792783 | None:intergenic | 35.0% | |
| TAATAACATACAAGACAGGG+TGG | - | chr3_3:34792785-34792804 | Msa0449860:intron | 35.0% | |
| AACTGCAAATCAATTGGGAT+TGG | + | chr3_3:34792811-34792830 | None:intergenic | 35.0% | |
| CCTAAGAATGACAGTGTAAA+GGG | + | chr3_3:34792895-34792914 | None:intergenic | 35.0% | |
| CCTTTACACTGTCATTCTTA+GGG | - | chr3_3:34792893-34792912 | Msa0449860:intron | 35.0% | |
| CTTTACACTGTCATTCTTAG+GGG | - | chr3_3:34792894-34792913 | Msa0449860:intron | 35.0% | |
| GTCATTCTTAGGGGATAAAT+TGG | - | chr3_3:34792903-34792922 | Msa0449860:intron | 35.0% | |
| GAAATGCATAATTGAGAACC+TGG | - | chr3_3:34792941-34792960 | Msa0449860:intron | 35.0% | |
| ACTGCTATTGAATTAGGTTC+TGG | - | chr3_3:34793179-34793198 | Msa0449860:intron | 35.0% | |
| ! | ATTGAATTAGGTTCTGGTGT+TGG | - | chr3_3:34793185-34793204 | Msa0449860:intron | 35.0% |
| ! | ATAGAAGAACGCATTGATAG+AGG | + | chr3_3:34793586-34793605 | None:intergenic | 35.0% |
| GTGATTATGTTAGGATAAGG+AGG | + | chr3_3:34793713-34793732 | None:intergenic | 35.0% | |
| ACTGAGTGTGTGATTATGTT+AGG | + | chr3_3:34793722-34793741 | None:intergenic | 35.0% | |
| ATAATCACACACTCAGTCAT+AGG | - | chr3_3:34793725-34793744 | Msa0449860:intron | 35.0% | |
| GTAGAAACTGAACCATAAAC+AGG | + | chr3_3:34793838-34793857 | None:intergenic | 35.0% | |
| GGTTTGGCAAAAAATAGGTT+TGG | + | chr3_3:34793883-34793902 | None:intergenic | 35.0% | |
| ! | AAAGCGGTTTGGCAAAAAAT+AGG | + | chr3_3:34793888-34793907 | None:intergenic | 35.0% |
| !!! | ATTTTTTGCCAAACCGCTTT+TGG | - | chr3_3:34793888-34793907 | Msa0449860:intron | 35.0% |
| GCAAAAGCCGTTAATTAAAC+TGG | + | chr3_3:34794054-34794073 | None:intergenic | 35.0% | |
| GTGATTTATGGTAACAAGGA+TGG | + | chr3_3:34794546-34794565 | None:intergenic | 35.0% | |
| TCATGACATGAGCTATCAAA+GGG | + | chr3_3:34794675-34794694 | None:intergenic | 35.0% | |
| TTCATGACATGAGCTATCAA+AGG | + | chr3_3:34794676-34794695 | None:intergenic | 35.0% | |
| CTAATAAGAACACTTCATGC+AGG | + | chr3_3:34794852-34794871 | None:intergenic | 35.0% | |
| AGTGACATATCTAGTGAGAA+AGG | - | chr3_3:34794907-34794926 | Msa0449860:intron | 35.0% | |
| GTGACATATCTAGTGAGAAA+GGG | - | chr3_3:34794908-34794927 | Msa0449860:intron | 35.0% | |
| ATCCGTGTATTTATATCCGA+TGG | + | chr3_3:34794975-34794994 | None:intergenic | 35.0% | |
| AATGTGTGGTAGTTGAAAAG+TGG | + | chr3_3:34795022-34795041 | None:intergenic | 35.0% | |
| AAGGTGATATCACAATGGAT+CGG | + | chr3_3:34795095-34795114 | None:intergenic | 35.0% | |
| TTGAGAAGAAGTCAATTCGT+AGG | - | chr3_3:34795194-34795213 | Msa0449860:intron | 35.0% | |
| GTTGAAAATTGGGTAAATCG+TGG | - | chr3_3:34795216-34795235 | Msa0449860:intron | 35.0% | |
| ! | AATCTGTACTCATGACTTGT+CGG | - | chr3_3:34795281-34795300 | Msa0449860:intron | 35.0% |
| ! | CCTTTAGTCCTCTTTTGTAT+TGG | + | chr3_3:34795453-34795472 | None:intergenic | 35.0% |
| CCAATACAAAAGAGGACTAA+AGG | - | chr3_3:34795450-34795469 | Msa0449860:intron | 35.0% | |
| ATACAAAAGAGGACTAAAGG+AGG | - | chr3_3:34795453-34795472 | Msa0449860:intron | 35.0% | |
| TGATCTAGATGTGAAGAACA+AGG | - | chr3_3:34795492-34795511 | Msa0449860:intron | 35.0% | |
| TATCCTTATGTGAGAACAAG+AGG | + | chr3_3:34795675-34795694 | None:intergenic | 35.0% | |
| AGACATGCTCCCATATATAT+AGG | - | chr3_3:34795707-34795726 | Msa0449860:intron | 35.0% | |
| AAATAATGTGTCATCGTGAC+AGG | + | chr3_3:34795753-34795772 | None:intergenic | 35.0% | |
| ! | TTGTTTGGAATGGAAAATGC+TGG | - | chr3_3:34795914-34795933 | Msa0449860:intron | 35.0% |
| TCTTGTAGGATTGAAAGACT+TGG | - | chr3_3:34795955-34795974 | Msa0449860:intron | 35.0% | |
| !! | GAAGATTTTCAAGGAGATGT+TGG | + | chr3_3:34796044-34796063 | None:intergenic | 35.0% |
| TAAGGAAGGGAAAATGCATT+TGG | + | chr3_3:34796117-34796136 | None:intergenic | 35.0% | |
| GTCTATGCATTTGATAAGGA+AGG | + | chr3_3:34796131-34796150 | None:intergenic | 35.0% | |
| ! | GTTGGTCTATGCATTTGATA+AGG | + | chr3_3:34796135-34796154 | None:intergenic | 35.0% |
| ! | TATTGGTTGGCATATGATGT+TGG | + | chr3_3:34796153-34796172 | None:intergenic | 35.0% |
| GGTCTCTAAGTTATATTGGT+TGG | + | chr3_3:34796166-34796185 | None:intergenic | 35.0% | |
| ACTGTTCTATACACTTGATC+GGG | - | chr3_3:34796223-34796242 | Msa0449860:intron | 35.0% | |
| ATCTTACCTAAGATAGGAAG+GGG | + | chr3_3:34796429-34796448 | None:intergenic | 35.0% | |
| GATCTTACCTAAGATAGGAA+GGG | + | chr3_3:34796430-34796449 | None:intergenic | 35.0% | |
| AGATCTTACCTAAGATAGGA+AGG | + | chr3_3:34796431-34796450 | None:intergenic | 35.0% | |
| TGTATGACATTAGACCTTGA+CGG | - | chr3_3:34796483-34796502 | Msa0449860:intron | 35.0% | |
| CTTTGAATCACAGGTATTAC+CGG | - | chr3_3:34796521-34796540 | Msa0449860:intron | 35.0% | |
| CCTTAAGCACTTCTTCATTA+TGG | + | chr3_3:34796589-34796608 | None:intergenic | 35.0% | |
| !! | CCATAATGAAGAAGTGCTTA+AGG | - | chr3_3:34796586-34796605 | Msa0449860:intron | 35.0% |
| !! | AATGAAGAAGTGCTTAAGGT+AGG | - | chr3_3:34796590-34796609 | Msa0449860:intron | 35.0% |
| !! | ATGAAGAAGTGCTTAAGGTA+GGG | - | chr3_3:34796591-34796610 | Msa0449860:intron | 35.0% |
| TAAGGTAGGGTTATAACACA+TGG | - | chr3_3:34796604-34796623 | Msa0449860:intron | 35.0% | |
| TCCTTCCTGATTATTCTATG+TGG | - | chr3_3:34796636-34796655 | Msa0449860:intron | 35.0% | |
| ACCACATAGAATAATCAGGA+AGG | + | chr3_3:34796640-34796659 | None:intergenic | 35.0% | |
| GAAGTAGGACTAATATTCTC+AGG | + | chr3_3:34796719-34796738 | None:intergenic | 35.0% | |
| GTAAATGCCTAGATGATCAA+TGG | - | chr3_3:34796748-34796767 | Msa0449860:intron | 35.0% | |
| GTATCTTCCATTGATCATCT+AGG | + | chr3_3:34796758-34796777 | None:intergenic | 35.0% | |
| TAGTAGCAGAGAAACTAGAA+TGG | - | chr3_3:34796821-34796840 | Msa0449860:intron | 35.0% | |
| AGTAGCAGAGAAACTAGAAT+GGG | - | chr3_3:34796822-34796841 | Msa0449860:intron | 35.0% | |
| ! | TTGCAAGCCATCATACTTTT+AGG | + | chr3_3:34796984-34797003 | None:intergenic | 35.0% |
| ! | AGTATGATGGCTTGCAATAT+AGG | - | chr3_3:34796987-34797006 | Msa0449860:CDS | 35.0% |
| ! | GTATGATGGCTTGCAATATA+GGG | - | chr3_3:34796988-34797007 | Msa0449860:CDS | 35.0% |
| !!! | CTTTGGGGTAATAGTCATTT+TGG | - | chr3_3:34797051-34797070 | Msa0449860:CDS | 35.0% |
| ! | AAGGGTTATTGTGAGTATTG+AGG | - | chr3_3:34797281-34797300 | Msa0449860:intron | 35.0% |
| !! | AGGGTTATTGTGAGTATTGA+GGG | - | chr3_3:34797282-34797301 | Msa0449860:intron | 35.0% |
| ATGAACAAAGTGCACAATCA+GGG | - | chr3_3:34797332-34797351 | Msa0449860:intron | 35.0% | |
| ! | TAACCTTCTAAAGATCTACG+GGG | + | chr3_3:34797434-34797453 | None:intergenic | 35.0% |
| GAAAGCTTGTGATTGTGTTA+AGG | + | chr3_3:34797714-34797733 | None:intergenic | 35.0% | |
| CAGATAGCAATAGATAGTAG+TGG | - | chr3_3:34797972-34797991 | Msa0449860:intron | 35.0% | |
| TGGACCACACTAAAATGATT+TGG | + | chr3_3:34798080-34798099 | None:intergenic | 35.0% | |
| ! | TCGTTTATATTTGAGACCAG+AGG | + | chr3_3:34798171-34798190 | None:intergenic | 35.0% |
| AAATTGGACTTTACTCCCTT+GGG | + | chr3_3:34798404-34798423 | None:intergenic | 35.0% | |
| TTTGGAGGAAGTTCAGAAAT+TGG | + | chr3_3:34798420-34798439 | None:intergenic | 35.0% | |
| TGTAGGATTGAGTAATTTGG+AGG | + | chr3_3:34798435-34798454 | None:intergenic | 35.0% | |
| CACATAGTTCCTAAAGTTGT+AGG | + | chr3_3:34798452-34798471 | None:intergenic | 35.0% | |
| ACTAAGATTTCTCTTACTGC+AGG | - | chr3_3:34798522-34798541 | Msa0449860:CDS | 35.0% | |
| TAAGTTTCAGATGCAGATGA+AGG | - | chr3_3:34798574-34798593 | Msa0449860:intron | 35.0% | |
| ! | CCAACAATACACTTTGTTTC+AGG | + | chr3_3:34798605-34798624 | None:intergenic | 35.0% |
| CCTGAAACAAAGTGTATTGT+TGG | - | chr3_3:34798602-34798621 | Msa0449860:intron | 35.0% | |
| TGTATTGTTGGGAATCATGA+AGG | - | chr3_3:34798614-34798633 | Msa0449860:intron | 35.0% | |
| TTGTCTGCAATGATTGACAA+GGG | + | chr3_3:34798789-34798808 | None:intergenic | 35.0% | |
| AGAAATCCATGGGTTTGATA+TGG | - | chr3_3:34798827-34798846 | Msa0449860:five_prime_UTR | 35.0% | |
| ! | TCTTTTCCATATCAAACCCA+TGG | + | chr3_3:34798836-34798855 | None:intergenic | 35.0% |
| AATGAAACGACGTGACATGA+AGG | - | chr3_3:34791123-34791142 | Msa0449860:three_prime_UTR | 40.0% | |
| TTTCTCTTTCTACGACGCTT+TGG | + | chr3_3:34791429-34791448 | None:intergenic | 40.0% | |
| AGGATTGCAAAAGGAAGAAG+AGG | - | chr3_3:34791453-34791472 | Msa0449860:three_prime_UTR | 40.0% | |
| ! | AAAAGGTATAGAGAGAGAGG+GGG | + | chr3_3:34791529-34791548 | None:intergenic | 40.0% |
| CAAATGTGAATTCCGTAAGC+TGG | + | chr3_3:34791615-34791634 | None:intergenic | 40.0% | |
| CAGCTTACGGAATTCACATT+TGG | - | chr3_3:34791613-34791632 | Msa0449860:intron | 40.0% | |
| CCGGGTAGAAGAACAATTAT+TGG | - | chr3_3:34791852-34791871 | Msa0449860:intron | 40.0% | |
| GAATCATTCGGCTGAATTCT+GGG | - | chr3_3:34792040-34792059 | Msa0449860:intron | 40.0% | |
| GTTAACCCTATAGTTCCTAG+GGG | + | chr3_3:34792079-34792098 | None:intergenic | 40.0% | |
| GTGTTAACCCTATAGTTCCT+AGG | + | chr3_3:34792081-34792100 | None:intergenic | 40.0% | |
| CCTTAAACACCATTGCATTG+CGG | - | chr3_3:34792123-34792142 | Msa0449860:intron | 40.0% | |
| TTATCTCAACCGCAATGCAA+TGG | + | chr3_3:34792135-34792154 | None:intergenic | 40.0% | |
| TTGCATTGCGGTTGAGATAA+TGG | - | chr3_3:34792135-34792154 | Msa0449860:intron | 40.0% | |
| ! | TCAACTTATTGCTACTGGCT+TGG | - | chr3_3:34792237-34792256 | Msa0449860:intron | 40.0% |
| CTGCTAGATATATGCAGAGA+GGG | + | chr3_3:34792386-34792405 | None:intergenic | 40.0% | |
| ACTGCTAGATATATGCAGAG+AGG | + | chr3_3:34792387-34792406 | None:intergenic | 40.0% | |
| ATATGTGATTCCTCCAAGGT+GGG | + | chr3_3:34792414-34792433 | None:intergenic | 40.0% | |
| TATATGTGATTCCTCCAAGG+TGG | + | chr3_3:34792415-34792434 | None:intergenic | 40.0% | |
| !!! | TTTTGAAACCTTGGAGTTGG+AGG | - | chr3_3:34792461-34792480 | Msa0449860:intron | 40.0% |
| CTACGTCAAAGTTTAGGGAA+CGG | + | chr3_3:34792628-34792647 | None:intergenic | 40.0% | |
| TTCCCTAAACTTTGACGTAG+CGG | - | chr3_3:34792628-34792647 | Msa0449860:intron | 40.0% | |
| CATTACTATTGCGGTATAGC+AGG | + | chr3_3:34792664-34792683 | None:intergenic | 40.0% | |
| ACTTGGTTCACCTCTTTGAA+AGG | - | chr3_3:34792751-34792770 | Msa0449860:intron | 40.0% | |
| TGACAGTGTAAAGGGTTACT+TGG | + | chr3_3:34792887-34792906 | None:intergenic | 40.0% | |
| CCCTTTACACTGTCATTCTT+AGG | - | chr3_3:34792892-34792911 | Msa0449860:intron | 40.0% | |
| CCCTAAGAATGACAGTGTAA+AGG | + | chr3_3:34792896-34792915 | None:intergenic | 40.0% | |
| !! | TCAGCTGACTTTGATTTGAC+AGG | - | chr3_3:34793083-34793102 | Msa0449860:intron | 40.0% |
| !! | CAGCTGACTTTGATTTGACA+GGG | - | chr3_3:34793084-34793103 | Msa0449860:intron | 40.0% |
| GGTTGCACTGCTATTGAATT+AGG | - | chr3_3:34793173-34793192 | Msa0449860:intron | 40.0% | |
| ! | GGATTTGGTACAAGAAGAGA+TGG | + | chr3_3:34793666-34793685 | None:intergenic | 40.0% |
| ! | AGGATAAGGAGGAGTTTGTT+AGG | + | chr3_3:34793702-34793721 | None:intergenic | 40.0% |
| ! | TAGCTGAGCCAGTTTAAAAC+TGG | + | chr3_3:34794159-34794178 | None:intergenic | 40.0% |
| !! | ATGTGGCATGTTGGTTCTAT+TGG | - | chr3_3:34794321-34794340 | Msa0449860:intron | 40.0% |
| GCAATATGTGCTACGTCATT+TGG | + | chr3_3:34794355-34794374 | None:intergenic | 40.0% | |
| TGGAACGATTAAGGTCTTCT+GGG | + | chr3_3:34794431-34794450 | None:intergenic | 40.0% | |
| AAGACCTTAATCGTTCCACT+AGG | - | chr3_3:34794433-34794452 | Msa0449860:intron | 40.0% | |
| AGACCTTAATCGTTCCACTA+GGG | - | chr3_3:34794434-34794453 | Msa0449860:intron | 40.0% | |
| TATCAGATACTTTGTGGCAG+GGG | + | chr3_3:34794621-34794640 | None:intergenic | 40.0% | |
| CTATCAGATACTTTGTGGCA+GGG | + | chr3_3:34794622-34794641 | None:intergenic | 40.0% | |
| GAAGCCTATCAGATACTTTG+TGG | + | chr3_3:34794627-34794646 | None:intergenic | 40.0% | |
| TATCCTTATGTGAGAGTGAG+AGG | - | chr3_3:34794931-34794950 | Msa0449860:intron | 40.0% | |
| TGATATCACAATGGATCGGA+AGG | + | chr3_3:34795091-34795110 | None:intergenic | 40.0% | |
| TTTGATGAGTGAACAGCCAA+GGG | + | chr3_3:34795365-34795384 | None:intergenic | 40.0% | |
| AAAAGAGGACTAAAGGAGGA+GGG | - | chr3_3:34795457-34795476 | Msa0449860:intron | 40.0% | |
| TGTGTGTGGTAGTTGAAAAG+TGG | - | chr3_3:34795590-34795609 | Msa0449860:intron | 40.0% | |
| GAGGATGACATATCAACCAT+TGG | + | chr3_3:34795656-34795675 | None:intergenic | 40.0% | |
| CATCCTCTTGTTCTCACATA+AGG | - | chr3_3:34795669-34795688 | Msa0449860:intron | 40.0% | |
| TGACAGGTTGTATAGTGGTA+AGG | + | chr3_3:34795737-34795756 | None:intergenic | 40.0% | |
| TCCAGCATACTTCTGATGAT+TGG | - | chr3_3:34795886-34795905 | Msa0449860:intron | 40.0% | |
| ! | TCCAATCATCAGAAGTATGC+TGG | + | chr3_3:34795890-34795909 | None:intergenic | 40.0% |
| AGCATACTTCTGATGATTGG+AGG | - | chr3_3:34795889-34795908 | Msa0449860:intron | 40.0% | |
| GCATACTTCTGATGATTGGA+GGG | - | chr3_3:34795890-34795909 | Msa0449860:intron | 40.0% | |
| TTCTATACACTTGATCGGGA+AGG | - | chr3_3:34796227-34796246 | Msa0449860:intron | 40.0% | |
| TCTATACACTTGATCGGGAA+GGG | - | chr3_3:34796228-34796247 | Msa0449860:intron | 40.0% | |
| GGAAAACATTAGAAGCTGAG+AGG | - | chr3_3:34796249-34796268 | Msa0449860:intron | 40.0% | |
| TTTATCCCCCTTCCTATCTT+AGG | - | chr3_3:34796420-34796439 | Msa0449860:intron | 40.0% | |
| TCTTACCTAAGATAGGAAGG+GGG | + | chr3_3:34796428-34796447 | None:intergenic | 40.0% | |
| AAGAAATAATCACGCCGTCA+AGG | + | chr3_3:34796500-34796519 | None:intergenic | 40.0% | |
| ! | GAATCTGTGGCAAAGTATTC+CGG | + | chr3_3:34796543-34796562 | None:intergenic | 40.0% |
| GTAGCAGAGAAACTAGAATG+GGG | - | chr3_3:34796823-34796842 | Msa0449860:intron | 40.0% | |
| TGACTACTCGTTACACATTC+AGG | + | chr3_3:34797078-34797097 | None:intergenic | 40.0% | |
| TGAGGGATTATGTTAGTGTC+AGG | - | chr3_3:34797299-34797318 | Msa0449860:intron | 40.0% | |
| GAGGGATTATGTTAGTGTCA+GGG | - | chr3_3:34797300-34797319 | Msa0449860:intron | 40.0% | |
| AGGGATTATGTTAGTGTCAG+GGG | - | chr3_3:34797301-34797320 | Msa0449860:intron | 40.0% | |
| GATGAACAAAGTGCACAATC+AGG | - | chr3_3:34797331-34797350 | Msa0449860:intron | 40.0% | |
| TGACTACTCCTTACACATTC+AGG | - | chr3_3:34797391-34797410 | Msa0449860:intron | 40.0% | |
| GACTACTCCTTACACATTCA+GGG | - | chr3_3:34797392-34797411 | Msa0449860:intron | 40.0% | |
| ! | TTTTGGTCCCTGAATGTGTA+AGG | + | chr3_3:34797402-34797421 | None:intergenic | 40.0% |
| TACACATTCAGGGACCAAAA+TGG | - | chr3_3:34797402-34797421 | Msa0449860:intron | 40.0% | |
| TTACCCCGTAGATCTTTAGA+AGG | - | chr3_3:34797428-34797447 | Msa0449860:intron | 40.0% | |
| ACACTGCTCGAAAAAGATGT+CGG | + | chr3_3:34797459-34797478 | None:intergenic | 40.0% | |
| AAAGCCTTTGCTAGTTGTCA+TGG | - | chr3_3:34797497-34797516 | Msa0449860:intron | 40.0% | |
| ATAGCCATGACAACTAGCAA+AGG | + | chr3_3:34797504-34797523 | None:intergenic | 40.0% | |
| !! | TCAAACATCCCTTTGCTGTT+TGG | - | chr3_3:34797739-34797758 | Msa0449860:intron | 40.0% |
| TAACGGTACCAAACAGCAAA+GGG | + | chr3_3:34797750-34797769 | None:intergenic | 40.0% | |
| CATCTTAGCTCGTGATACAT+AGG | + | chr3_3:34797821-34797840 | None:intergenic | 40.0% | |
| !! | GAGCATAGCTCAGTTGATAA+GGG | + | chr3_3:34798247-34798266 | None:intergenic | 40.0% |
| ! | TGAGCATAGCTCAGTTGATA+AGG | + | chr3_3:34798248-34798267 | None:intergenic | 40.0% |
| TATCAACTGAGCTATGCTCA+CGG | - | chr3_3:34798248-34798267 | Msa0449860:intron | 40.0% | |
| ATGCTTAGAATCAAGACCCA+AGG | - | chr3_3:34798385-34798404 | Msa0449860:intron | 40.0% | |
| TGCTTAGAATCAAGACCCAA+GGG | - | chr3_3:34798386-34798405 | Msa0449860:intron | 40.0% | |
| GAAATTGGACTTTACTCCCT+TGG | + | chr3_3:34798405-34798424 | None:intergenic | 40.0% | |
| AGATTTCTCTTACTGCAGGA+TGG | - | chr3_3:34798526-34798545 | Msa0449860:CDS | 40.0% | |
| TTCTATGCCATGTTTGCTTC+TGG | + | chr3_3:34798696-34798715 | None:intergenic | 40.0% | |
| ! | AACTGATCTGACTTGAGCAT+TGG | - | chr3_3:34798723-34798742 | Msa0449860:exon | 40.0% |
| !!! | TTGAGCATTGGCTAGTGTTT+TGG | - | chr3_3:34798735-34798754 | Msa0449860:exon | 40.0% |
| !!! | GTGTTTTGGTTCGAACTGAA+AGG | - | chr3_3:34798749-34798768 | Msa0449860:five_prime_UTR | 40.0% |
| TGCAATGATTGACAAGGGTA+GGG | + | chr3_3:34798784-34798803 | None:intergenic | 40.0% | |
| GTTGTCTGCAATGATTGACA+AGG | + | chr3_3:34798790-34798809 | None:intergenic | 40.0% | |
| AGATGACTCGAGAAATCCAT+GGG | - | chr3_3:34798817-34798836 | Msa0449860:five_prime_UTR | 40.0% | |
| AGTTATTAGCAGAGTCGGTC+AGG | - | chr3_3:34791266-34791285 | Msa0449860:three_prime_UTR | 45.0% | |
| ! | AAAGGTATAGAGAGAGAGGG+GGG | + | chr3_3:34791528-34791547 | None:intergenic | 45.0% |
| TAATGAGTTCCGCCTGAGAA+CGG | - | chr3_3:34791801-34791820 | Msa0449860:intron | 45.0% | |
| ! | ATAACCCTCTGGTTCCTAGT+CGG | + | chr3_3:34791905-34791924 | None:intergenic | 45.0% |
| CGAATCATTCGGCTGAATTC+TGG | - | chr3_3:34792039-34792058 | Msa0449860:intron | 45.0% | |
| ! | GTGTTTAAGGTAGCACCTAG+GGG | + | chr3_3:34792113-34792132 | None:intergenic | 45.0% |
| ! | GGTGTTTAAGGTAGCACCTA+GGG | + | chr3_3:34792114-34792133 | None:intergenic | 45.0% |
| ! | TGGTGTTTAAGGTAGCACCT+AGG | + | chr3_3:34792115-34792134 | None:intergenic | 45.0% |
| CCGCAATGCAATGGTGTTTA+AGG | + | chr3_3:34792126-34792145 | None:intergenic | 45.0% | |
| ATCTCTCGTCCTCATCTTTG+AGG | - | chr3_3:34792349-34792368 | Msa0449860:intron | 45.0% | |
| GACTGAAAGCCTCAAAGATG+AGG | + | chr3_3:34792361-34792380 | None:intergenic | 45.0% | |
| TATGTGATTCCTCCAAGGTG+GGG | + | chr3_3:34792413-34792432 | None:intergenic | 45.0% | |
| GAGAGAAAACTCTCCTCCTA+GGG | - | chr3_3:34793496-34793515 | Msa0449860:intron | 45.0% | |
| ATTGAAAAAGGGGGAACCCT+AGG | + | chr3_3:34793515-34793534 | None:intergenic | 45.0% | |
| ! | ATTCTGCTTTGTTCCCCATC+AGG | - | chr3_3:34793772-34793791 | Msa0449860:intron | 45.0% |
| ! | TTCTGCTTTGTTCCCCATCA+GGG | - | chr3_3:34793773-34793792 | Msa0449860:intron | 45.0% |
| CCACTAAACCAAAAGCGGTT+TGG | + | chr3_3:34793899-34793918 | None:intergenic | 45.0% | |
| !!! | CCAAACCGCTTTTGGTTTAG+TGG | - | chr3_3:34793896-34793915 | Msa0449860:intron | 45.0% |
| CCAGACCACTAAACCAAAAG+CGG | + | chr3_3:34793904-34793923 | None:intergenic | 45.0% | |
| GGAACGATTAAGGTCTTCTG+GGG | + | chr3_3:34794430-34794449 | None:intergenic | 45.0% | |
| GTGGAACGATTAAGGTCTTC+TGG | + | chr3_3:34794432-34794451 | None:intergenic | 45.0% | |
| TTTATTGATCAGGGCCCTAG+TGG | + | chr3_3:34794451-34794470 | None:intergenic | 45.0% | |
| ! | TTTCTGAGGAGCTAATCAGC+TGG | - | chr3_3:34794587-34794606 | Msa0449860:intron | 45.0% |
| ! | TTCTGAGGAGCTAATCAGCT+GGG | - | chr3_3:34794588-34794607 | Msa0449860:intron | 45.0% |
| ATCAGATACTTTGTGGCAGG+GGG | + | chr3_3:34794620-34794639 | None:intergenic | 45.0% | |
| CCTATCAGATACTTTGTGGC+AGG | + | chr3_3:34794623-34794642 | None:intergenic | 45.0% | |
| ! | CCTGCCACAAAGTATCTGAT+AGG | - | chr3_3:34794620-34794639 | Msa0449860:intron | 45.0% |
| CATCCTCTCACTCTCACATA+AGG | + | chr3_3:34794937-34794956 | None:intergenic | 45.0% | |
| GGTGGAAGGTGATATCACAA+TGG | + | chr3_3:34795100-34795119 | None:intergenic | 45.0% | |
| GAAGTTGTGGTTTCAAACGG+TGG | + | chr3_3:34795139-34795158 | None:intergenic | 45.0% | |
| GTTTGATGAGTGAACAGCCA+AGG | + | chr3_3:34795366-34795385 | None:intergenic | 45.0% | |
| CAAAAGAGGACTAAAGGAGG+AGG | - | chr3_3:34795456-34795475 | Msa0449860:intron | 45.0% | |
| AAAGAGGACTAAAGGAGGAG+GGG | - | chr3_3:34795458-34795477 | Msa0449860:intron | 45.0% | |
| TGTGAAGAACAAGGTCTGAG+AGG | - | chr3_3:34795501-34795520 | Msa0449860:intron | 45.0% | |
| TCTGAGAGGTTTGATGAAGC+AGG | - | chr3_3:34795515-34795534 | Msa0449860:intron | 45.0% | |
| AGAGGTTTGATGAAGCAGGA+TGG | - | chr3_3:34795519-34795538 | Msa0449860:intron | 45.0% | |
| GAGGTTTGATGAAGCAGGAT+GGG | - | chr3_3:34795520-34795539 | Msa0449860:intron | 45.0% | |
| GGAGCATGTCTAGTGAGAAA+GGG | + | chr3_3:34795698-34795717 | None:intergenic | 45.0% | |
| CATCGTGACAGGTTGTATAG+TGG | + | chr3_3:34795742-34795761 | None:intergenic | 45.0% | |
| ! | TGATGATTGGAGGGCTTGTT+TGG | - | chr3_3:34795899-34795918 | Msa0449860:intron | 45.0% |
| ! | ATTGGAGGGCTTGTTTGGAA+TGG | - | chr3_3:34795904-34795923 | Msa0449860:intron | 45.0% |
| AGGATTGAAAGACTTGGCTC+AGG | - | chr3_3:34795961-34795980 | Msa0449860:intron | 45.0% | |
| GGATTGAAAGACTTGGCTCA+GGG | - | chr3_3:34795962-34795981 | Msa0449860:intron | 45.0% | |
| ! | GACAGTTTGGTTAGCTCCTT+CGG | - | chr3_3:34796010-34796029 | Msa0449860:intron | 45.0% |
| ! | GATGTTGGTTAATGCACCGA+AGG | + | chr3_3:34796029-34796048 | None:intergenic | 45.0% |
| CCACACGTAGATCTAAAAGC+TGG | + | chr3_3:34796340-34796359 | None:intergenic | 45.0% | |
| ! | CCAGCTTTTAGATCTACGTG+TGG | - | chr3_3:34796337-34796356 | Msa0449860:intron | 45.0% |
| GGTAGGGTTATAACACATGG+TGG | - | chr3_3:34796607-34796626 | Msa0449860:intron | 45.0% | |
| ! | CTACGGGGTAATAGCCATTT+TGG | + | chr3_3:34797419-34797438 | None:intergenic | 45.0% |
| CACTGCTCGAAAAAGATGTC+GGG | + | chr3_3:34797458-34797477 | None:intergenic | 45.0% | |
| CTAACGGTACCAAACAGCAA+AGG | + | chr3_3:34797751-34797770 | None:intergenic | 45.0% | |
| AACTTGCAGGAGCTGTCTAA+CGG | + | chr3_3:34797767-34797786 | None:intergenic | 45.0% | |
| !! | TTCTGCCTTCGTTAACTTGC+AGG | + | chr3_3:34797780-34797799 | None:intergenic | 45.0% |
| ATCAACTGAGCTATGCTCAC+GGG | - | chr3_3:34798249-34798268 | Msa0449860:intron | 45.0% | |
| GAGGTTTCCAGAAGCAAACA+TGG | - | chr3_3:34798686-34798705 | Msa0449860:CDS | 45.0% | |
| CTGCAATGATTGACAAGGGT+AGG | + | chr3_3:34798785-34798804 | None:intergenic | 45.0% | |
| CAGATGACTCGAGAAATCCA+TGG | - | chr3_3:34798816-34798835 | Msa0449860:five_prime_UTR | 45.0% | |
| !!! | TTAAGATTTTTTTATAAAAA+TGG | - | chr3_3:34795404-34795423 | Msa0449860:intron | 5.0% |
| !!! | ATTACAATATTAATTTTATT+TGG | + | chr3_3:34797653-34797672 | None:intergenic | 5.0% |
| AGTCGGTCAGGACCAATTTG+AGG | - | chr3_3:34791278-34791297 | Msa0449860:three_prime_UTR | 50.0% | |
| AAGGTATAGAGAGAGAGGGG+GGG | + | chr3_3:34791527-34791546 | None:intergenic | 50.0% | |
| GTCGGACTTTACTTCCCTCT+CGG | - | chr3_3:34791874-34791893 | Msa0449860:intron | 50.0% | |
| CGGCTGAATTCTGGGTTTCT+AGG | - | chr3_3:34792048-34792067 | Msa0449860:intron | 50.0% | |
| ACCCTATAGTTCCTAGGGGA+GGG | + | chr3_3:34792075-34792094 | None:intergenic | 50.0% | |
| AACCCTATAGTTCCTAGGGG+AGG | + | chr3_3:34792076-34792095 | None:intergenic | 50.0% | |
| TCTAGCAGTATTCCCCACCT+TGG | - | chr3_3:34792398-34792417 | Msa0449860:intron | 50.0% | |
| ! | AATGTTGGCCTCCAACTCCA+AGG | + | chr3_3:34792472-34792491 | None:intergenic | 50.0% |
| GGCCGCTACGTCAAAGTTTA+GGG | + | chr3_3:34792633-34792652 | None:intergenic | 50.0% | |
| TGGCCGCTACGTCAAAGTTT+AGG | + | chr3_3:34792634-34792653 | None:intergenic | 50.0% | |
| !! | CTTTGATTTGACAGGGCAGC+TGG | - | chr3_3:34793091-34793110 | Msa0449860:intron | 50.0% |
| ATTTGACAGGGCAGCTGGTA+TGG | - | chr3_3:34793096-34793115 | Msa0449860:intron | 50.0% | |
| TCATTCAGCAACATGGCTCC+AGG | + | chr3_3:34793122-34793141 | None:intergenic | 50.0% | |
| GGAGAGAAAACTCTCCTCCT+AGG | - | chr3_3:34793495-34793514 | Msa0449860:intron | 50.0% | |
| ! | TCTGCTTTGTTCCCCATCAG+GGG | - | chr3_3:34793774-34793793 | Msa0449860:intron | 50.0% |
| AAATCCTGCACACCCCTGAT+GGG | + | chr3_3:34793789-34793808 | None:intergenic | 50.0% | |
| !!! | CCGCTTTTGGTTTAGTGGTC+TGG | - | chr3_3:34793901-34793920 | Msa0449860:intron | 50.0% |
| ! | GGGTATTGCAGCTGATGGAT+CGG | + | chr3_3:34794410-34794429 | None:intergenic | 50.0% |
| !! | TTCTGGGGTATTGCAGCTGA+TGG | + | chr3_3:34794415-34794434 | None:intergenic | 50.0% |
| AATGTTCACGTACAGCCCCT+TGG | - | chr3_3:34794809-34794828 | Msa0449860:intron | 50.0% | |
| ! | TGCAGGAAGAGAGTGTACGA+GGG | + | chr3_3:34794835-34794854 | None:intergenic | 50.0% |
| ! | ATGCAGGAAGAGAGTGTACG+AGG | + | chr3_3:34794836-34794855 | None:intergenic | 50.0% |
| ACCTTCCACCTCCTCAATCT+AGG | - | chr3_3:34795110-34795129 | Msa0449860:intron | 50.0% | |
| AACGGTGGAAGCCTAGATTG+AGG | + | chr3_3:34795124-34795143 | None:intergenic | 50.0% | |
| ! | TCATGACTTGTCGGAGACCA+TGG | - | chr3_3:34795290-34795309 | Msa0449860:intron | 50.0% |
| ! | GAGAGATTTTGCGGTCACGA+AGG | + | chr3_3:34795339-34795358 | None:intergenic | 50.0% |
| ! | CAAGGGAGGGAGAGATTTTG+CGG | + | chr3_3:34795348-34795367 | None:intergenic | 50.0% |
| ATGAGTGAACAGCCAAGGGA+GGG | + | chr3_3:34795361-34795380 | None:intergenic | 50.0% | |
| AAGAGGACTAAAGGAGGAGG+GGG | - | chr3_3:34795459-34795478 | Msa0449860:intron | 50.0% | |
| GAAGCAGGATGGGAAAGAGA+AGG | - | chr3_3:34795530-34795549 | Msa0449860:intron | 50.0% | |
| AGGATGGGAAAGAGAAGGTG+AGG | - | chr3_3:34795535-34795554 | Msa0449860:intron | 50.0% | |
| GGATGGGAAAGAGAAGGTGA+GGG | - | chr3_3:34795536-34795555 | Msa0449860:intron | 50.0% | |
| GATGGGAAAGAGAAGGTGAG+GGG | - | chr3_3:34795537-34795556 | Msa0449860:intron | 50.0% | |
| ! | GGGAGCATGTCTAGTGAGAA+AGG | + | chr3_3:34795699-34795718 | None:intergenic | 50.0% |
| AGCTGAGAGGCTAAGACGTT+AGG | - | chr3_3:34796262-34796281 | Msa0449860:intron | 50.0% | |
| GCTGAGAGGCTAAGACGTTA+GGG | - | chr3_3:34796263-34796282 | Msa0449860:intron | 50.0% | |
| AGAACGAAGTCGAAACCTCC+AGG | + | chr3_3:34796886-34796905 | None:intergenic | 50.0% | |
| GGAGGTTTCGACTTCGTTCT+TGG | - | chr3_3:34796886-34796905 | Msa0449860:intron | 50.0% | |
| CAGCTCCTGCAAGTTAACGA+AGG | - | chr3_3:34797772-34797791 | Msa0449860:intron | 50.0% | |
| AGGTATAGAGAGAGAGGGGG+GGG | + | chr3_3:34791526-34791545 | None:intergenic | 55.0% | |
| CGGAATGATCCGTTCTCAGG+CGG | + | chr3_3:34791813-34791832 | None:intergenic | 55.0% | |
| CGCCTGAGAACGGATCATTC+CGG | - | chr3_3:34791811-34791830 | Msa0449860:intron | 55.0% | |
| CTCCGGAATGATCCGTTCTC+AGG | + | chr3_3:34791816-34791835 | None:intergenic | 55.0% | |
| CCCTATAGTTCCTAGGGGAG+GGG | + | chr3_3:34792074-34792093 | None:intergenic | 55.0% | |
| CCCCTCCCCTAGGAACTATA+GGG | - | chr3_3:34792071-34792090 | Msa0449860:intron | 55.0% | |
| TAACACGAATTGCGGCCCCT+AGG | - | chr3_3:34792095-34792114 | Msa0449860:intron | 55.0% | |
| AGCAGTATTCCCCACCTTGG+AGG | - | chr3_3:34792401-34792420 | Msa0449860:intron | 55.0% | |
| GCGGTATAGCAGGTGCAGTA+TGG | + | chr3_3:34792654-34792673 | None:intergenic | 55.0% | |
| GAAAAAGGGGGAACCCTAGG+AGG | + | chr3_3:34793512-34793531 | None:intergenic | 55.0% | |
| AATCCTGCACACCCCTGATG+GGG | + | chr3_3:34793788-34793807 | None:intergenic | 55.0% | |
| CAAATCCTGCACACCCCTGA+TGG | + | chr3_3:34793790-34793809 | None:intergenic | 55.0% | |
| ! | CATCAGGGGTGTGCAGGATT+TGG | - | chr3_3:34793788-34793807 | Msa0449860:intron | 55.0% |
| GGGCCCTAGTGGAACGATTA+AGG | + | chr3_3:34794440-34794459 | None:intergenic | 55.0% | |
| AGGAGCTAATCAGCTGGGCA+TGG | - | chr3_3:34794593-34794612 | Msa0449860:intron | 55.0% | |
| ! | AGAGAGTGTACGAGGGCCAA+GGG | + | chr3_3:34794828-34794847 | None:intergenic | 55.0% |
| ! | AAGAGAGTGTACGAGGGCCA+AGG | + | chr3_3:34794829-34794848 | None:intergenic | 55.0% |
| GCCTAGATTGAGGAGGTGGA+AGG | + | chr3_3:34795114-34795133 | None:intergenic | 55.0% | |
| GGAAGCCTAGATTGAGGAGG+TGG | + | chr3_3:34795118-34795137 | None:intergenic | 55.0% | |
| GGTGGAAGCCTAGATTGAGG+AGG | + | chr3_3:34795121-34795140 | None:intergenic | 55.0% | |
| ! | TTTTGCGGTCACGAAGGCCA+CGG | + | chr3_3:34795333-34795352 | None:intergenic | 55.0% |
| CGCAAAATCTCTCCCTCCCT+TGG | - | chr3_3:34795346-34795365 | Msa0449860:intron | 55.0% | |
| GATGAGTGAACAGCCAAGGG+AGG | + | chr3_3:34795362-34795381 | None:intergenic | 55.0% | |
| ACTAAAGGAGGAGGGGGTCA+TGG | - | chr3_3:34795465-34795484 | Msa0449860:intron | 55.0% | |
| GGTATAGAGAGAGAGGGGGG+GGG | + | chr3_3:34791525-34791544 | None:intergenic | 60.0% | |
| ! | CCTCTGGTTCCTAGTCGGAG+GGG | + | chr3_3:34791900-34791919 | None:intergenic | 60.0% |
| ! | CCCTCTGGTTCCTAGTCGGA+GGG | + | chr3_3:34791901-34791920 | None:intergenic | 60.0% |
| CCCTCCGACTAGGAACCAGA+GGG | - | chr3_3:34791898-34791917 | Msa0449860:intron | 60.0% | |
| ! | ACCCTCTGGTTCCTAGTCGG+AGG | + | chr3_3:34791902-34791921 | None:intergenic | 60.0% |
| GCCCCTCCCCTAGGAACTAT+AGG | - | chr3_3:34792070-34792089 | Msa0449860:intron | 60.0% | |
| ! | GAGAGTGTACGAGGGCCAAG+GGG | + | chr3_3:34794827-34794846 | None:intergenic | 60.0% |
| TGAAGAGGGTGAGGCGACCA+TGG | + | chr3_3:34795310-34795329 | None:intergenic | 60.0% | |
| CACGAAGGCCACGGTGAAGA+GGG | + | chr3_3:34795324-34795343 | None:intergenic | 60.0% | |
| TCACGAAGGCCACGGTGAAG+AGG | + | chr3_3:34795325-34795344 | None:intergenic | 60.0% | |
| AAGGAGGAGGGGGTCATGGT+AGG | - | chr3_3:34795469-34795488 | Msa0449860:intron | 60.0% | |
| CCCCTCCGACTAGGAACCAG+AGG | - | chr3_3:34791897-34791916 | Msa0449860:intron | 65.0% | |
| ! | GGTTTCTAGGCCCCTCCCCT+AGG | - | chr3_3:34792061-34792080 | Msa0449860:intron | 65.0% |
| ACAGGGCAGCTGGTATGGCC+TGG | - | chr3_3:34793101-34793120 | Msa0449860:intron | 65.0% | |
| ! | GTTCCCCATCAGGGGTGTGC+AGG | - | chr3_3:34793782-34793801 | Msa0449860:intron | 65.0% |
| TCGCCTCACCCTCTTCACCG+TGG | - | chr3_3:34795313-34795332 | Msa0449860:intron | 65.0% | |
| AGGCCACGGTGAAGAGGGTG+AGG | + | chr3_3:34795319-34795338 | None:intergenic | 65.0% | |
| CCTAGTCGGAGGGGCCGAGA+GGG | + | chr3_3:34791891-34791910 | None:intergenic | 70.0% | |
| TCCTAGTCGGAGGGGCCGAG+AGG | + | chr3_3:34791892-34791911 | None:intergenic | 70.0% | |
| CCCTCTCGGCCCCTCCGACT+AGG | - | chr3_3:34791888-34791907 | Msa0449860:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 34791092 | 34799065 | 34791092 | ID=Msa0449860;Name=Msa0449860 |
| chr3_3 | mRNA | 34791092 | 34799065 | 34791092 | ID=Msa0449860-mRNA-1;Parent=Msa0449860;Name=Msa0449860-mRNA-1;_AED=0.11;_eAED=0.11;_QI=329|0.83|0.85|1|0.83|0.85|7|401|217 |
| chr3_3 | exon | 34791092 | 34791613 | 34791092 | ID=Msa0449860-mRNA-1:exon:6207;Parent=Msa0449860-mRNA-1 |
| chr3_3 | exon | 34793225 | 34793339 | 34793225 | ID=Msa0449860-mRNA-1:exon:6206;Parent=Msa0449860-mRNA-1 |
| chr3_3 | exon | 34793414 | 34793474 | 34793414 | ID=Msa0449860-mRNA-1:exon:6205;Parent=Msa0449860-mRNA-1 |
| chr3_3 | exon | 34793550 | 34793623 | 34793550 | ID=Msa0449860-mRNA-1:exon:6204;Parent=Msa0449860-mRNA-1 |
| chr3_3 | exon | 34796951 | 34797070 | 34796951 | ID=Msa0449860-mRNA-1:exon:6203;Parent=Msa0449860-mRNA-1 |
| chr3_3 | exon | 34798481 | 34798548 | 34798481 | ID=Msa0449860-mRNA-1:exon:6202;Parent=Msa0449860-mRNA-1 |
| chr3_3 | exon | 34798642 | 34799065 | 34798642 | ID=Msa0449860-mRNA-1:exon:6201;Parent=Msa0449860-mRNA-1 |
| chr3_3 | five_prime_UTR | 34798737 | 34799065 | 34798737 | ID=Msa0449860-mRNA-1:five_prime_utr;Parent=Msa0449860-mRNA-1 |
| chr3_3 | CDS | 34798642 | 34798736 | 34798642 | ID=Msa0449860-mRNA-1:cds;Parent=Msa0449860-mRNA-1 |
| chr3_3 | CDS | 34798481 | 34798548 | 34798481 | ID=Msa0449860-mRNA-1:cds;Parent=Msa0449860-mRNA-1 |
| chr3_3 | CDS | 34796951 | 34797070 | 34796951 | ID=Msa0449860-mRNA-1:cds;Parent=Msa0449860-mRNA-1 |
| chr3_3 | CDS | 34793550 | 34793623 | 34793550 | ID=Msa0449860-mRNA-1:cds;Parent=Msa0449860-mRNA-1 |
| chr3_3 | CDS | 34793414 | 34793474 | 34793414 | ID=Msa0449860-mRNA-1:cds;Parent=Msa0449860-mRNA-1 |
| chr3_3 | CDS | 34793225 | 34793339 | 34793225 | ID=Msa0449860-mRNA-1:cds;Parent=Msa0449860-mRNA-1 |
| chr3_3 | CDS | 34791493 | 34791613 | 34791493 | ID=Msa0449860-mRNA-1:cds;Parent=Msa0449860-mRNA-1 |
| chr3_3 | three_prime_UTR | 34791092 | 34791492 | 34791092 | ID=Msa0449860-mRNA-1:three_prime_utr;Parent=Msa0449860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
