Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0450300 | XP_003601248.1 | 90.471 | 976 | 55 | 4 | 1 | 938 | 1 | 976 | 0.0 | 1723 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0450300 | sp|Q6ZWE6|PKHM3_HUMAN | 26.190 | 336 | 215 | 8 | 557 | 880 | 428 | 742 | 7.46e-31 | 134 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0450300 | G7J5E3 | 90.471 | 976 | 55 | 4 | 1 | 938 | 1 | 976 | 0.0 | 1723 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0091730 | Msa0450300 | 0.805079 | 1.587275e-49 | -8.615850e-47 |
Msa0122530 | Msa0450300 | 0.807652 | 4.552770e-50 | -8.615850e-47 |
Msa0422460 | Msa0450300 | 0.873881 | 1.042950e-67 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0450300 | MtrunA17_Chr3g0117471 | 90.471 | 976 | 55 | 4 | 1 | 938 | 1 | 976 | 0.0 | 1723 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0450300 | AT3G48195.1 | 44.004 | 984 | 428 | 24 | 20 | 938 | 13 | 938 | 0.0 | 697 |
Find 236 sgRNAs with CRISPR-Local
Find 694 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTCAAAATGGTCCAGTTTC+TGG | 0.145333 | 3_3:+35651393 | Msa0450300:CDS |
GCTTTCTAAAGCAACGTTTA+TGG | 0.186569 | 3_3:-35661050 | None:intergenic |
TTAGGCAAGGGACTGAGTTC+TGG | 0.190949 | 3_3:+35661180 | Msa0450300:CDS |
GATGATTCTATGTTCAATTA+TGG | 0.202163 | 3_3:+35651189 | Msa0450300:CDS |
ATGATGGAAATAGTTCAATT+TGG | 0.211640 | 3_3:+35653330 | Msa0450300:CDS |
TCGAGGAGTGTGACTTTATA+TGG | 0.217457 | 3_3:+35651288 | Msa0450300:CDS |
TGCCTCATTGATTTATTTGA+TGG | 0.234548 | 3_3:-35653257 | None:intergenic |
ATGAATTCTTCTGTGGCTTT+TGG | 0.244159 | 3_3:+35651345 | Msa0450300:CDS |
CCAGCCTTGCTCGTTAAATA+AGG | 0.269930 | 3_3:-35652941 | None:intergenic |
TCAATCCTATCTATTCTTCT+TGG | 0.270221 | 3_3:-35652754 | None:intergenic |
TACAGTCTATTCTCTGTTCC+AGG | 0.282888 | 3_3:+35653067 | Msa0450300:CDS |
TCAGCTGGCAAAGTCATATC+TGG | 0.290392 | 3_3:+35653499 | Msa0450300:CDS |
AGGCGAAAATATCATCTTAA+TGG | 0.294279 | 3_3:+35661269 | Msa0450300:CDS |
CTCTTCTGAGGATCTTCTTC+TGG | 0.302261 | 3_3:-35651642 | None:intergenic |
AATTTCAACAATAAGTGATA+TGG | 0.304221 | 3_3:-35653234 | None:intergenic |
CTTGATTCGTCGGAGTTGAT+TGG | 0.310336 | 3_3:+35651063 | Msa0450300:CDS |
ATGAAAATGGTGGTGAAGTT+GGG | 0.314048 | 3_3:+35651115 | Msa0450300:CDS |
TGATGGAAATAGTTCAATTT+GGG | 0.317753 | 3_3:+35653331 | Msa0450300:CDS |
TGACAGATACAAACCTGAAA+TGG | 0.335756 | 3_3:-35660185 | None:intergenic |
CAAAATATGTTGCACATCTT+AGG | 0.338686 | 3_3:+35661394 | Msa0450300:three_prime_UTR |
TGCTGACAACTCGCTTGATT+CGG | 0.345356 | 3_3:+35651611 | Msa0450300:CDS |
TGATGCTCAAAAGGAAAATC+TGG | 0.351437 | 3_3:+35651719 | Msa0450300:CDS |
CTTTAGAAGAGGTGAGGGAT+AGG | 0.352803 | 3_3:+35651559 | Msa0450300:CDS |
CAATCCTATCTATTCTTCTT+GGG | 0.356272 | 3_3:-35652753 | None:intergenic |
TCGAGTGGATTGGAATTATA+CGG | 0.358801 | 3_3:+35651009 | Msa0450300:CDS |
CTTTCAGTGAAAGATTGGTT+GGG | 0.363302 | 3_3:+35652812 | Msa0450300:CDS |
ATTCTATGACGAGGTTGTTC+AGG | 0.364642 | 3_3:+35652573 | Msa0450300:CDS |
CTCTTCCTTCGGCGCCGAAT+CGG | 0.370085 | 3_3:+35650822 | Msa0450300:CDS |
CAATGATGTAAAACCCTTGC+TGG | 0.375697 | 3_3:-35653452 | None:intergenic |
CCTGTTTCCTGTGAAGTTCA+AGG | 0.376029 | 3_3:+35651588 | Msa0450300:CDS |
GACTTTGCCAGCTGAGAAAC+AGG | 0.377920 | 3_3:-35653491 | None:intergenic |
AGATCAGACACACCAGAAAC+TGG | 0.381083 | 3_3:-35651405 | None:intergenic |
GCTGACAACTCGCTTGATTC+GGG | 0.381258 | 3_3:+35651612 | Msa0450300:CDS |
ATTGATCAGTAATGTGTTCC+AGG | 0.381287 | 3_3:-35660088 | None:intergenic |
ATGATTCTATGTTCAATTAT+GGG | 0.386395 | 3_3:+35651190 | Msa0450300:CDS |
GGCGAAAATATCATCTTAAT+GGG | 0.389819 | 3_3:+35661270 | Msa0450300:CDS |
TAGGCAAGGGACTGAGTTCT+GGG | 0.392227 | 3_3:+35661181 | Msa0450300:CDS |
AATGAAAATGGTGGTGAAGT+TGG | 0.394474 | 3_3:+35651114 | Msa0450300:CDS |
AGACTGCAGTTTCATTTGTA+TGG | 0.401491 | 3_3:-35653427 | None:intergenic |
TGTTTCTTTCAGTGAAAGAT+TGG | 0.404855 | 3_3:+35652807 | Msa0450300:CDS |
GAATCTGCTGGGAATGAAAA+TGG | 0.406382 | 3_3:+35651102 | Msa0450300:CDS |
GATTGAGAGGGAAGAGGATG+AGG | 0.409697 | 3_3:+35651146 | Msa0450300:CDS |
TGCTTCATGTTATGAGTGTC+AGG | 0.410697 | 3_3:+35654205 | Msa0450300:CDS |
CTCTCTCGCCGCTCTTCCTT+CGG | 0.412134 | 3_3:+35650811 | Msa0450300:CDS |
CTGTCCAAAGGAGTCTTTGC+TGG | 0.414010 | 3_3:+35654354 | Msa0450300:CDS |
TTGTCACCTAAGTTTCTCTC+TGG | 0.418461 | 3_3:+35661204 | Msa0450300:CDS |
AAGAATGGGCAGCGAACATA+TGG | 0.418773 | 3_3:-35654249 | None:intergenic |
CAATCTTGTCGGGCACTACA+TGG | 0.421270 | 3_3:-35660137 | None:intergenic |
TCGATACGGTTCGAGTGGAT+TGG | 0.421543 | 3_3:+35650999 | Msa0450300:CDS |
AGAAGAAGCGAAATCGATAT+CGG | 0.422186 | 3_3:-35650941 | None:intergenic |
TGACGAGGTTGTTCAGGAAA+TGG | 0.422512 | 3_3:+35652579 | Msa0450300:CDS |
AACTGTGTCGAGGAAAATCC+TGG | 0.425481 | 3_3:+35660070 | Msa0450300:CDS |
TTCTCTTCGCAATAATATCA+AGG | 0.426823 | 3_3:-35653023 | None:intergenic |
CCTTGAACTTCACAGGAAAC+AGG | 0.431773 | 3_3:-35651588 | None:intergenic |
GAGGGAAGAGGATGAGGAAG+AGG | 0.437916 | 3_3:+35651152 | Msa0450300:CDS |
CCTTATTTAACGAGCAAGGC+TGG | 0.438111 | 3_3:+35652941 | Msa0450300:CDS |
TCTTTCAGTGAAAGATTGGT+TGG | 0.438848 | 3_3:+35652811 | Msa0450300:CDS |
TGAAAGATTGGTTGGGGTGA+AGG | 0.439470 | 3_3:+35652819 | Msa0450300:CDS |
CTCATAACATGAAGCAAGGC+TGG | 0.440085 | 3_3:-35654198 | None:intergenic |
CGATTGGCGGAGACGTAGCC+GGG | 0.441408 | 3_3:-35650782 | None:intergenic |
AATAATCGAGTTGAAGAAGA+TGG | 0.443824 | 3_3:+35651450 | Msa0450300:CDS |
TTTAGAAGAGGTGAGGGATA+GGG | 0.452013 | 3_3:+35651560 | Msa0450300:CDS |
GCTGGACTTTACCTTTGCCT+TGG | 0.452192 | 3_3:+35652959 | Msa0450300:CDS |
AATGAATCCAACGGTGGATC+CGG | 0.453709 | 3_3:-35650757 | None:intergenic |
GACAGATACAAACCTGAAAT+GGG | 0.463779 | 3_3:-35660184 | None:intergenic |
GGCACTGCGGATGCTCATGC+TGG | 0.464273 | 3_3:-35650896 | None:intergenic |
TCAACAATGGAGTTGGAAAT+CGG | 0.465435 | 3_3:+35654280 | Msa0450300:CDS |
TATTAAGAATGATGCTCAAA+AGG | 0.465908 | 3_3:+35651710 | Msa0450300:CDS |
TGACACAAGGAAGGGATTAA+CGG | 0.467444 | 3_3:-35654169 | None:intergenic |
CTAACCAGCAAAGACTCCTT+TGG | 0.467588 | 3_3:-35654358 | None:intergenic |
TCATTATCCTGTTTCTCAGC+TGG | 0.468402 | 3_3:+35653484 | Msa0450300:CDS |
AGCTTGCAAATTGTCCTTGT+GGG | 0.470724 | 3_3:+35661070 | Msa0450300:CDS |
AATGGGAAAATGAGAGAAGA+TGG | 0.470947 | 3_3:-35660167 | None:intergenic |
GTCAACCCACCATCTCTTGA+AGG | 0.476231 | 3_3:-35652685 | None:intergenic |
AATAATCCAGAGAGAAACTT+AGG | 0.476614 | 3_3:-35661210 | None:intergenic |
CCGGCTACGTCTCCGCCAAT+CGG | 0.477239 | 3_3:+35650783 | Msa0450300:CDS |
ATCGGAGAAATCGTGGAAAA+CGG | 0.478455 | 3_3:-35650923 | None:intergenic |
TAATCCCTTCCTTGTGTCAA+AGG | 0.478469 | 3_3:+35654173 | Msa0450300:CDS |
TCTGATCATAAAGAATTGCT+TGG | 0.482380 | 3_3:-35661300 | None:intergenic |
CCTCGACTTTGTGAATATAC+TGG | 0.483091 | 3_3:+35653383 | Msa0450300:CDS |
GACGGAATTGAAGAATCTGC+TGG | 0.483629 | 3_3:+35651090 | Msa0450300:CDS |
TCAAATCATGAACGGGTCTC+CGG | 0.485919 | 3_3:+35650738 | Msa0450300:exon |
TTCCCACATCACAGCATATG+AGG | 0.486002 | 3_3:-35660112 | None:intergenic |
ATGGGTCACTGCAATCTTGT+CGG | 0.487163 | 3_3:-35660148 | None:intergenic |
CCGATTGGCGGAGACGTAGC+CGG | 0.487980 | 3_3:-35650783 | None:intergenic |
GGTGATGAGCTTAGTATGAC+CGG | 0.489502 | 3_3:+35651039 | Msa0450300:CDS |
TTGCTAACAGAGTAAGTCAC+TGG | 0.489946 | 3_3:+35661124 | Msa0450300:CDS |
TGGGTCACTGCAATCTTGTC+GGG | 0.490051 | 3_3:-35660147 | None:intergenic |
AGAGAAGATGACAACGATGC+AGG | 0.490886 | 3_3:-35650570 | None:intergenic |
CACCGTTGGATTCATTTCCC+CGG | 0.492803 | 3_3:+35650764 | Msa0450300:CDS |
CCAGGTTTCAAATCATGAAC+GGG | 0.494062 | 3_3:+35650731 | Msa0450300:intron |
AAGAGAGATTGAGAGGGAAG+AGG | 0.494223 | 3_3:+35651140 | Msa0450300:CDS |
ATAATCGAGTTGAAGAAGAT+GGG | 0.496027 | 3_3:+35651451 | Msa0450300:CDS |
TTGTTGATAGACCTCAAGAA+TGG | 0.502187 | 3_3:-35654264 | None:intergenic |
AGTGTGACTTTATATGGAGA+AGG | 0.503252 | 3_3:+35651294 | Msa0450300:CDS |
CTCTATATGAACGGATACAT+TGG | 0.503550 | 3_3:-35651805 | None:intergenic |
GCACAACATCACACATGTGC+TGG | 0.504163 | 3_3:+35653290 | Msa0450300:CDS |
TTCCTTGTTTCGCCATTCGA+CGG | 0.504183 | 3_3:-35651873 | None:intergenic |
GGTGCTCGGTGTTCCCATCA+TGG | 0.504455 | 3_3:-35650875 | None:intergenic |
TGGGGAGGTGGTGGAACGAA+AGG | 0.504729 | 3_3:+35661144 | Msa0450300:CDS |
TTGGGGTAAGAGAGATTGAG+AGG | 0.504905 | 3_3:+35651133 | Msa0450300:CDS |
CGGATGCTCATGCTGGTGCT+CGG | 0.506208 | 3_3:-35650889 | None:intergenic |
GAGAAGATGACAACGATGCA+GGG | 0.506481 | 3_3:-35650569 | None:intergenic |
TATTCGAAACTCTTCCACTT+GGG | 0.507926 | 3_3:+35653205 | Msa0450300:CDS |
AACAGGAAGGCGACATTGAA+AGG | 0.508105 | 3_3:+35661004 | Msa0450300:intron |
CCATTCGACGGCAGTACGAT+TGG | 0.509870 | 3_3:-35651861 | None:intergenic |
AACTCGGACTGAACAAATCA+AGG | 0.514970 | 3_3:+35661097 | Msa0450300:CDS |
TTCCATCATCAAAATGCCTA+TGG | 0.515562 | 3_3:-35653316 | None:intergenic |
ATGTTCGCTGCCCATTCTTG+AGG | 0.519037 | 3_3:+35654253 | Msa0450300:CDS |
AAGAAAAGCCTGAGAAAACA+AGG | 0.524471 | 3_3:+35661238 | Msa0450300:CDS |
AGGTCTATCAACAATGGAGT+TGG | 0.525120 | 3_3:+35654273 | Msa0450300:CDS |
AGGAGCTTTAGAAGAGGTGA+GGG | 0.525439 | 3_3:+35651554 | Msa0450300:CDS |
GTAAGTCACTGGGGAGGTGG+TGG | 0.529380 | 3_3:+35661135 | Msa0450300:CDS |
CTATGGATTCTCCTGCGGCT+AGG | 0.529951 | 3_3:+35652620 | Msa0450300:CDS |
TATGACCGGGCTTGATTCGT+CGG | 0.532307 | 3_3:+35651053 | Msa0450300:CDS |
GTCAGCACCTTGAACTTCAC+AGG | 0.532411 | 3_3:-35651595 | None:intergenic |
CAGCGCAAGTAACTCCATGA+TGG | 0.534193 | 3_3:+35650861 | Msa0450300:CDS |
CCCACCATCTCTTGAAGGCA+TGG | 0.535394 | 3_3:-35652680 | None:intergenic |
TGCCGTCGAATGGCGAAACA+AGG | 0.540617 | 3_3:+35651871 | Msa0450300:CDS |
ATTCGAAACTCTTCCACTTG+GGG | 0.541947 | 3_3:+35653206 | Msa0450300:CDS |
TCATAAAGAATTGCTTGGTA+AGG | 0.546065 | 3_3:-35661295 | None:intergenic |
GTTGCTTATGAATTCTTCTG+TGG | 0.546531 | 3_3:+35651338 | Msa0450300:CDS |
CAGTCCATGCCTTCAAGAGA+TGG | 0.547134 | 3_3:+35652676 | Msa0450300:CDS |
TGTTGATAGACCTCAAGAAT+GGG | 0.548493 | 3_3:-35654263 | None:intergenic |
AGACTCCGATTCGGCGCCGA+AGG | 0.548499 | 3_3:-35650827 | None:intergenic |
AAGAATAGATAGGATTGAAG+TGG | 0.548698 | 3_3:+35652759 | Msa0450300:CDS |
TTCTAACACATTTGTCGAAG+TGG | 0.550102 | 3_3:-35651913 | None:intergenic |
GAGAGAGACCGTCCGATTGG+CGG | 0.550985 | 3_3:-35650795 | None:intergenic |
TAATCCCGCGCGATAATCAA+AGG | 0.552027 | 3_3:+35650637 | Msa0450300:five_prime_UTR |
ACTCGATTATTACTTTCTCG+TGG | 0.552334 | 3_3:-35651438 | None:intergenic |
GACACAGTTTCGACCATCAC+AGG | 0.553591 | 3_3:-35660056 | None:intergenic |
CTAACCTTTGATTATCGCGC+GGG | 0.554020 | 3_3:-35650641 | None:intergenic |
AGAGTAAGTCACTGGGGAGG+TGG | 0.554803 | 3_3:+35661132 | Msa0450300:CDS |
CTACGTCTCCGCCAATCGGA+CGG | 0.555983 | 3_3:+35650787 | Msa0450300:CDS |
TCCTGCGGCTAGGTCTTCCG+TGG | 0.556188 | 3_3:+35652630 | Msa0450300:CDS |
CCAATCGTACTGCCGTCGAA+TGG | 0.557605 | 3_3:+35651861 | Msa0450300:CDS |
TTTCAGTGAAAGATTGGTTG+GGG | 0.558191 | 3_3:+35652813 | Msa0450300:CDS |
TCAACAGAAGACCAAGGCAA+AGG | 0.559003 | 3_3:-35652970 | None:intergenic |
AAATCCTTATTTAACGAGCA+AGG | 0.559447 | 3_3:+35652937 | Msa0450300:CDS |
TGAAAATGGTGGTGAAGTTG+GGG | 0.559938 | 3_3:+35651116 | Msa0450300:CDS |
TCTATGTTCAATTATGGGAG+TGG | 0.560344 | 3_3:+35651195 | Msa0450300:CDS |
AAACTGCAGTCTTGCCAGCA+AGG | 0.561262 | 3_3:+35653438 | Msa0450300:CDS |
AACTGCAGTCTTGCCAGCAA+GGG | 0.562657 | 3_3:+35653439 | Msa0450300:CDS |
ACACATGTGCTGGATGCCAT+AGG | 0.566341 | 3_3:+35653300 | Msa0450300:CDS |
GTAACGTTCAGACTCCGATT+CGG | 0.567037 | 3_3:-35650836 | None:intergenic |
ATGGGAAAATGAGAGAAGAT+GGG | 0.568007 | 3_3:-35660166 | None:intergenic |
ACCAGGTTTCAAATCATGAA+CGG | 0.569251 | 3_3:+35650730 | Msa0450300:intron |
TTCTGATCGAAAAGAAGAGA+AGG | 0.569956 | 3_3:+35651479 | Msa0450300:CDS |
CGGGTCTCCGGATCCACCGT+TGG | 0.570986 | 3_3:+35650750 | Msa0450300:CDS |
TGGGGTAAGAGAGATTGAGA+GGG | 0.572142 | 3_3:+35651134 | Msa0450300:CDS |
GTAGGTGCAAGGCAGAAAAG+AGG | 0.572743 | 3_3:+35652781 | Msa0450300:CDS |
GGATGGTGGAAGTGAGGCAG+AGG | 0.574284 | 3_3:+35651677 | Msa0450300:CDS |
TCAGAAGAGTTTCAATATCA+CGG | 0.574397 | 3_3:+35651656 | Msa0450300:CDS |
ATATTCGAAACTCTTCCACT+TGG | 0.574429 | 3_3:+35653204 | Msa0450300:CDS |
GGCGAGAGAGACCGTCCGAT+TGG | 0.574887 | 3_3:-35650798 | None:intergenic |
CTTGAAGGCATGGACTGTTG+TGG | 0.575315 | 3_3:-35652670 | None:intergenic |
TCCATGCCTTCAAGAGATGG+TGG | 0.575379 | 3_3:+35652679 | Msa0450300:CDS |
AGTTTCAATATCACGGATGG+TGG | 0.576112 | 3_3:+35651663 | Msa0450300:CDS |
TTATGCAGCACTGCCTGTGA+TGG | 0.576198 | 3_3:+35660043 | Msa0450300:intron |
TGTGGAGCGGCAAGGATCAG+TGG | 0.583022 | 3_3:+35652866 | Msa0450300:CDS |
AACGGCAGTGACACAAAGCA+TGG | 0.586392 | 3_3:-35654151 | None:intergenic |
TAGGTGCAAGGCAGAAAAGA+GGG | 0.589230 | 3_3:+35652782 | Msa0450300:CDS |
ATCCACATTCTCTATATGAA+CGG | 0.589341 | 3_3:-35651814 | None:intergenic |
TGTCCTTGTGGGGAACAACT+CGG | 0.589414 | 3_3:+35661081 | Msa0450300:CDS |
GAAATCGTGGAAAACGGTAA+CGG | 0.589807 | 3_3:-35650917 | None:intergenic |
AGCGCAAGTAACTCCATGAT+GGG | 0.590171 | 3_3:+35650862 | Msa0450300:CDS |
AATTATGGGAGTGGTTGTGA+TGG | 0.592868 | 3_3:+35651204 | Msa0450300:CDS |
AGTCCGAGTTGTTCCCCACA+AGG | 0.593100 | 3_3:-35661084 | None:intergenic |
ATCCGTTCATATAGAGAATG+TGG | 0.594724 | 3_3:+35651812 | Msa0450300:CDS |
TGCTAACAGAGTAAGTCACT+GGG | 0.595733 | 3_3:+35661125 | Msa0450300:CDS |
GTGGAGCGGCAAGGATCAGT+GGG | 0.596116 | 3_3:+35652867 | Msa0450300:CDS |
GAGGAGCTTTAGAAGAGGTG+AGG | 0.598877 | 3_3:+35651553 | Msa0450300:CDS |
TGGGACCTTTGACACAAGGA+AGG | 0.599774 | 3_3:-35654178 | None:intergenic |
TCTCTTCGCAATAATATCAA+GGG | 0.600962 | 3_3:-35653022 | None:intergenic |
AGCGCCCAAGAAGAATAGAT+AGG | 0.601446 | 3_3:+35652749 | Msa0450300:CDS |
GTAAAAGAAGACAGAGACAC+TGG | 0.602072 | 3_3:-35653170 | None:intergenic |
ATAGATAGGATTGAAGTGGT+AGG | 0.603119 | 3_3:+35652763 | Msa0450300:CDS |
AATCTTGTCGGGCACTACAT+GGG | 0.603819 | 3_3:-35660136 | None:intergenic |
AAGGTGCAAATCTTGTCAGT+CGG | 0.603859 | 3_3:+35661023 | Msa0450300:CDS |
TTCGAAACTCTTCCACTTGG+GGG | 0.604968 | 3_3:+35653207 | Msa0450300:CDS |
TTCTTGAGGTCTATCAACAA+TGG | 0.605421 | 3_3:+35654267 | Msa0450300:CDS |
GCTTGCAAATTGTCCTTGTG+GGG | 0.605716 | 3_3:+35661071 | Msa0450300:CDS |
ACGGAATTGAAGAATCTGCT+GGG | 0.609111 | 3_3:+35651091 | Msa0450300:CDS |
AATCGATATCGGAGAAATCG+TGG | 0.612894 | 3_3:-35650930 | None:intergenic |
CAACTCCGACGAATCAAGCC+CGG | 0.613585 | 3_3:-35651058 | None:intergenic |
TCGGAGTTGATTGGAAATGA+CGG | 0.614440 | 3_3:+35651072 | Msa0450300:CDS |
GGATTGAAGTGGTAGGTGCA+AGG | 0.615415 | 3_3:+35652770 | Msa0450300:CDS |
AAGAGTTTCAATATCACGGA+TGG | 0.617979 | 3_3:+35651660 | Msa0450300:CDS |
ACAGAAGAATTCATAAGCAA+CGG | 0.618550 | 3_3:-35651336 | None:intergenic |
AAGCTTGCAAATTGTCCTTG+TGG | 0.619131 | 3_3:+35661069 | Msa0450300:CDS |
GTGATGAGCTTAGTATGACC+GGG | 0.620813 | 3_3:+35651040 | Msa0450300:CDS |
GATTTGATTGATCTGTCCAA+AGG | 0.623813 | 3_3:+35654342 | Msa0450300:CDS |
CCTGCGGCTAGGTCTTCCGT+GGG | 0.625706 | 3_3:+35652631 | Msa0450300:CDS |
TAATCGAGTTGAAGAAGATG+GGG | 0.626683 | 3_3:+35651452 | Msa0450300:CDS |
GTGATATTGAAACTCTTCTG+AGG | 0.628819 | 3_3:-35651654 | None:intergenic |
ATTCGGCGCCGAAGGAAGAG+CGG | 0.629282 | 3_3:-35650819 | None:intergenic |
ATGCCTCATATGCTGTGATG+TGG | 0.631218 | 3_3:+35660109 | Msa0450300:CDS |
TTTGTACAGACATTTGGCTG+GGG | 0.631863 | 3_3:+35653356 | Msa0450300:CDS |
AAACAAGGAAAATATTAGAG+AGG | 0.634126 | 3_3:+35651886 | Msa0450300:CDS |
CCATGCCTTCAAGAGATGGT+GGG | 0.634715 | 3_3:+35652680 | Msa0450300:CDS |
CCAGTATATTCACAAAGTCG+AGG | 0.635225 | 3_3:-35653383 | None:intergenic |
TTCCATCAAATAAATCAATG+AGG | 0.636676 | 3_3:+35653255 | Msa0450300:CDS |
TCATAACATGAAGCAAGGCT+GGG | 0.637902 | 3_3:-35654197 | None:intergenic |
CCCACGGAAGACCTAGCCGC+AGG | 0.638105 | 3_3:-35652631 | None:intergenic |
GGAGTCTATGGATTCTCCTG+CGG | 0.638903 | 3_3:+35652615 | Msa0450300:CDS |
AATAAAAGTGTGGAGCGGCA+AGG | 0.641900 | 3_3:+35652858 | Msa0450300:CDS |
TTGTACAGACATTTGGCTGG+GGG | 0.642232 | 3_3:+35653357 | Msa0450300:CDS |
TATCACGGATGGTGGAAGTG+AGG | 0.645632 | 3_3:+35651671 | Msa0450300:CDS |
GACACTCATAACATGAAGCA+AGG | 0.645816 | 3_3:-35654202 | None:intergenic |
TGCCTCATATGCTGTGATGT+GGG | 0.646362 | 3_3:+35660110 | Msa0450300:CDS |
AGAAGATGACAACGATGCAG+GGG | 0.647118 | 3_3:-35650568 | None:intergenic |
GGGACCTTTGACACAAGGAA+GGG | 0.650238 | 3_3:-35654177 | None:intergenic |
AGAAAAGCCTGAGAAAACAA+GGG | 0.651830 | 3_3:+35661239 | Msa0450300:CDS |
GACACTGGAGAGTTTGACAC+AGG | 0.653199 | 3_3:-35653155 | None:intergenic |
ATCAAACATTCTGTTACCCA+CGG | 0.654457 | 3_3:-35652647 | None:intergenic |
GCTAACCTTTGATTATCGCG+CGG | 0.655067 | 3_3:-35650642 | None:intergenic |
AGGCTGGGACCTTTGACACA+AGG | 0.665035 | 3_3:-35654182 | None:intergenic |
TATAAAATAAAAGTGTGGAG+CGG | 0.665928 | 3_3:+35652853 | Msa0450300:CDS |
ACGGCAGTGACACAAAGCAT+GGG | 0.666612 | 3_3:-35654150 | None:intergenic |
TGATCGAGGAGCTTTAGAAG+AGG | 0.668259 | 3_3:+35651548 | Msa0450300:CDS |
AGGTGCAAGGCAGAAAAGAG+GGG | 0.673940 | 3_3:+35652783 | Msa0450300:CDS |
GATGGTGGAAGTGAGGCAGA+GGG | 0.678774 | 3_3:+35651678 | Msa0450300:CDS |
GATTGGCGGAGACGTAGCCG+GGG | 0.683318 | 3_3:-35650781 | None:intergenic |
AGCCGGGGAAATGAATCCAA+CGG | 0.684225 | 3_3:-35650766 | None:intergenic |
GAGAAAACAAGGGAGCGTCA+AGG | 0.684750 | 3_3:+35661249 | Msa0450300:CDS |
CTGTTTATAAAATAAAAGTG+TGG | 0.686064 | 3_3:+35652848 | Msa0450300:CDS |
TCGAAAAGAAGAGAAGGACG+CGG | 0.687796 | 3_3:+35651485 | Msa0450300:CDS |
GAGCGGCAAGGATCAGTGGG+AGG | 0.690029 | 3_3:+35652870 | Msa0450300:CDS |
GCTAAGTGAATTCTATGACG+AGG | 0.707993 | 3_3:+35652564 | Msa0450300:CDS |
AACAGAGTAAGTCACTGGGG+AGG | 0.716059 | 3_3:+35661129 | Msa0450300:CDS |
TTGGAATTATACGGTGACGA+TGG | 0.720466 | 3_3:+35651018 | Msa0450300:CDS |
TGATGGTCGAAACTGTGTCG+AGG | 0.728077 | 3_3:+35660060 | Msa0450300:CDS |
GGAAAACGGTAACGGCACTG+CGG | 0.742777 | 3_3:-35650909 | None:intergenic |
CGGGGAAATGAATCCAACGG+TGG | 0.757927 | 3_3:-35650763 | None:intergenic |
GCTAACAGAGTAAGTCACTG+GGG | 0.766228 | 3_3:+35661126 | Msa0450300:CDS |
TCTGCTGGGAATGAAAATGG+TGG | 0.773508 | 3_3:+35651105 | Msa0450300:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATATATATATAAATATAT+CGG | - | chr3_3:35657176-35657195 | None:intergenic | 0.0% |
!! | TTGATTATTAAAAAGTAATT+AGG | - | chr3_3:35650711-35650730 | None:intergenic | 10.0% |
!! | AAATATCATATAAATCTAAT+GGG | - | chr3_3:35652221-35652240 | None:intergenic | 10.0% |
!!! | CTTTTGAATATTAAATTTTA+TGG | + | chr3_3:35653842-35653861 | Msa0450300:intron | 10.0% |
!!! | CATTTTTTTTTTATAAAACT+TGG | - | chr3_3:35655512-35655531 | None:intergenic | 10.0% |
!! | TTGATAAAATATGTATTTAA+GGG | - | chr3_3:35656325-35656344 | None:intergenic | 10.0% |
!! | ATTGATAAAATATGTATTTA+AGG | - | chr3_3:35656326-35656345 | None:intergenic | 10.0% |
!!! | TTAAATACATATTTTATCAA+TGG | + | chr3_3:35656325-35656344 | Msa0450300:intron | 10.0% |
!! | ATATATATAAAATCACATTT+AGG | + | chr3_3:35657188-35657207 | Msa0450300:intron | 10.0% |
!! | AATTCAAAATGTAATAATAT+TGG | + | chr3_3:35657220-35657239 | Msa0450300:intron | 10.0% |
!!! | TTATTTTATCATATTCTTTT+AGG | - | chr3_3:35657576-35657595 | None:intergenic | 10.0% |
!! | AATATGATAAAATAATATCA+TGG | + | chr3_3:35657581-35657600 | Msa0450300:intron | 10.0% |
!! | GAAATATCATATAAATCTAA+TGG | - | chr3_3:35652222-35652241 | None:intergenic | 15.0% |
!! | AACTTGATTATTAACTAAAA+TGG | + | chr3_3:35652243-35652262 | Msa0450300:intron | 15.0% |
!! | TTTCCTTTGATAAATTAATT+TGG | + | chr3_3:35654440-35654459 | Msa0450300:intron | 15.0% |
!! | TTCCTTTGATAAATTAATTT+GGG | + | chr3_3:35654441-35654460 | Msa0450300:intron | 15.0% |
!! | TAACAAATGATGAATTTATA+GGG | + | chr3_3:35655194-35655213 | Msa0450300:intron | 15.0% |
!! | ATGAATAGTAATTACTTATA+GGG | + | chr3_3:35655418-35655437 | Msa0450300:intron | 15.0% |
!! | TGATAAAATATGTATTTAAG+GGG | - | chr3_3:35656324-35656343 | None:intergenic | 15.0% |
!! | GCTATATTTATAAAATTCTT+TGG | - | chr3_3:35656472-35656491 | None:intergenic | 15.0% |
!! | TAGTATGATGATTATATAAA+AGG | + | chr3_3:35656507-35656526 | Msa0450300:intron | 15.0% |
!! | AGTCTCTATTATTATAAAAT+AGG | + | chr3_3:35656553-35656572 | Msa0450300:intron | 15.0% |
!!! | GACATAAGTATAAATTTTTT+AGG | + | chr3_3:35657404-35657423 | Msa0450300:intron | 15.0% |
!! | TAAATAGATTAGCATTATAT+TGG | - | chr3_3:35657487-35657506 | None:intergenic | 15.0% |
!! | ATTCTTAATTTACTCAATTT+CGG | + | chr3_3:35657611-35657630 | Msa0450300:intron | 15.0% |
!!! | TAATAACAAAAGTTGTTATT+TGG | + | chr3_3:35657726-35657745 | Msa0450300:intron | 15.0% |
!!! | AAAAAAAACAACGATTTTAA+GGG | + | chr3_3:35658582-35658601 | Msa0450300:intron | 15.0% |
!!! | ATCTGAATTTTCTTATTAAT+GGG | - | chr3_3:35658785-35658804 | None:intergenic | 15.0% |
!! | ATTAATTGATATAGGTATAT+TGG | - | chr3_3:35658808-35658827 | None:intergenic | 15.0% |
!! | TTACTTTAATTGATATGAAA+AGG | + | chr3_3:35658834-35658853 | Msa0450300:intron | 15.0% |
!! | TACTTTAATTGATATGAAAA+GGG | + | chr3_3:35658835-35658854 | Msa0450300:intron | 15.0% |
!!! | CTTTTTTAATTTAAAAACTG+TGG | + | chr3_3:35660385-35660404 | Msa0450300:intron | 15.0% |
!!! | TATAATTTGATTCTTTTACT+AGG | - | chr3_3:35660608-35660627 | None:intergenic | 15.0% |
!!! | TCAATTATTTTAATAGCAAT+TGG | - | chr3_3:35660645-35660664 | None:intergenic | 15.0% |
!!! | AAATCTATTTTAATCATTCA+TGG | + | chr3_3:35660780-35660799 | Msa0450300:intron | 15.0% |
!!! | TTACTTTTTAATAATCAACC+AGG | + | chr3_3:35650713-35650732 | Msa0450300:intron | 20.0% |
!! | ATGATTCTATGTTCAATTAT+GGG | + | chr3_3:35651190-35651209 | Msa0450300:CDS | 20.0% |
!!! | GATGATTTTTTGATTCAAAA+TGG | + | chr3_3:35651381-35651400 | Msa0450300:CDS | 20.0% |
!! | GTTGAAGAAACAAAAAATAT+TGG | + | chr3_3:35651525-35651544 | Msa0450300:CDS | 20.0% |
!! | ATATAATAACTGTAAAGGTT+TGG | - | chr3_3:35652006-35652025 | None:intergenic | 20.0% |
!!! | ATAACTACAATTTTAAACCT+TGG | - | chr3_3:35652072-35652091 | None:intergenic | 20.0% |
!!! | AAATTGAAATTTTGGATGAA+TGG | + | chr3_3:35652370-35652389 | Msa0450300:intron | 20.0% |
!! | AATTATTATTCTACCTATAC+AGG | + | chr3_3:35652501-35652520 | Msa0450300:intron | 20.0% |
!! | ATTATTATTCTACCTATACA+GGG | + | chr3_3:35652502-35652521 | Msa0450300:intron | 20.0% |
!! | CTGTTTATAAAATAAAAGTG+TGG | + | chr3_3:35652848-35652867 | Msa0450300:CDS | 20.0% |
!! | AATTTCAACAATAAGTGATA+TGG | - | chr3_3:35653237-35653256 | None:intergenic | 20.0% |
!!! | TATAGTAATTGCTAGTTTTA+AGG | + | chr3_3:35653704-35653723 | Msa0450300:intron | 20.0% |
!!! | AATTTTATGGCCTTTATTAT+TGG | + | chr3_3:35653855-35653874 | Msa0450300:intron | 20.0% |
!! | ATTAAGCTAACCAATAATAA+AGG | - | chr3_3:35653868-35653887 | None:intergenic | 20.0% |
!! | AACCCAAATTAATTTATCAA+AGG | - | chr3_3:35654446-35654465 | None:intergenic | 20.0% |
!!! | ATAAATTAATTTGGGTTTGA+TGG | + | chr3_3:35654449-35654468 | Msa0450300:intron | 20.0% |
!! | AATCTTAGAACATTTATGTA+TGG | + | chr3_3:35655074-35655093 | Msa0450300:intron | 20.0% |
!! | CTAACAAATGATGAATTTAT+AGG | + | chr3_3:35655193-35655212 | Msa0450300:intron | 20.0% |
!!! | ATAGCATTTTTTAAATGCTT+GGG | - | chr3_3:35655259-35655278 | None:intergenic | 20.0% |
!!! | TATAGCATTTTTTAAATGCT+TGG | - | chr3_3:35655260-35655279 | None:intergenic | 20.0% |
!!! | GATTAAGTCTACAATATTTT+GGG | - | chr3_3:35655298-35655317 | None:intergenic | 20.0% |
!!! | TGATTAAGTCTACAATATTT+TGG | - | chr3_3:35655299-35655318 | None:intergenic | 20.0% |
!! | CATGAATAGTAATTACTTAT+AGG | + | chr3_3:35655417-35655436 | Msa0450300:intron | 20.0% |
!!! | ACTCTTGTTTATATATATGT+GGG | - | chr3_3:35656093-35656112 | None:intergenic | 20.0% |
!!! | TACTCTTGTTTATATATATG+TGG | - | chr3_3:35656094-35656113 | None:intergenic | 20.0% |
!! | TATATATAAACAAGAGTAAG+TGG | + | chr3_3:35656096-35656115 | Msa0450300:intron | 20.0% |
!! | ATATATAAACAAGAGTAAGT+GGG | + | chr3_3:35656097-35656116 | Msa0450300:intron | 20.0% |
!! | TGCAAAATTATTAACATAAG+TGG | + | chr3_3:35656194-35656213 | Msa0450300:intron | 20.0% |
!!! | TTGGAATTTTAATTGTGAAA+AGG | - | chr3_3:35656453-35656472 | None:intergenic | 20.0% |
!!! | CTTATATTTTATTGTTACTG+AGG | + | chr3_3:35656687-35656706 | Msa0450300:intron | 20.0% |
!!! | TTGCTATTCTTTAATACTTA+TGG | - | chr3_3:35656739-35656758 | None:intergenic | 20.0% |
!! | CTTACTTATTATTATCCTTA+AGG | - | chr3_3:35657318-35657337 | None:intergenic | 20.0% |
!! | TGTTCTTTCTAATTTATAGT+GGG | - | chr3_3:35657823-35657842 | None:intergenic | 20.0% |
!! | ATGTTCTTTCTAATTTATAG+TGG | - | chr3_3:35657824-35657843 | None:intergenic | 20.0% |
!! | TAATTGCTTATTCTTTATTG+AGG | - | chr3_3:35658138-35658157 | None:intergenic | 20.0% |
!! | TATATAAGAATTCAGATGTA+AGG | + | chr3_3:35658203-35658222 | Msa0450300:intron | 20.0% |
!! | AAACAACTTATTAAGAATCT+AGG | - | chr3_3:35658252-35658271 | None:intergenic | 20.0% |
!!! | GTTGTTTTGATAATAGTTAA+CGG | + | chr3_3:35658265-35658284 | Msa0450300:intron | 20.0% |
!!! | GATTATTTTGGCATAAATTT+TGG | - | chr3_3:35658393-35658412 | None:intergenic | 20.0% |
!! | TATTTGGCATAAAACAAAAA+TGG | + | chr3_3:35658441-35658460 | Msa0450300:intron | 20.0% |
!!! | CAAAAAAAACAACGATTTTA+AGG | + | chr3_3:35658581-35658600 | Msa0450300:intron | 20.0% |
!!! | AAAAAAACAACGATTTTAAG+GGG | + | chr3_3:35658583-35658602 | Msa0450300:intron | 20.0% |
!!! | TGATTCTGAAAATTTTCATA+GGG | - | chr3_3:35658640-35658659 | None:intergenic | 20.0% |
!!! | ATGATTCTGAAAATTTTCAT+AGG | - | chr3_3:35658641-35658660 | None:intergenic | 20.0% |
!! | AAATCTTTGATCAAAGATTT+GGG | + | chr3_3:35658677-35658696 | Msa0450300:intron | 20.0% |
!!! | TTTTTTTAGTTTGTGACTTT+CGG | - | chr3_3:35658714-35658733 | None:intergenic | 20.0% |
!!! | AAAAAAAATTCTAGAGTTCA+TGG | + | chr3_3:35658734-35658753 | Msa0450300:intron | 20.0% |
!!! | GATCTGAATTTTCTTATTAA+TGG | - | chr3_3:35658786-35658805 | None:intergenic | 20.0% |
!! | AGTATGTCTTAATATTAATG+TGG | + | chr3_3:35659675-35659694 | Msa0450300:intron | 20.0% |
!! | ATAAATTAGTTGGCAATTAA+GGG | - | chr3_3:35659886-35659905 | None:intergenic | 20.0% |
!! | AATCCAACATACAATTTATT+GGG | - | chr3_3:35660291-35660310 | None:intergenic | 20.0% |
!! | TTAATTTAAAAACTGTGGAA+AGG | + | chr3_3:35660390-35660409 | Msa0450300:intron | 20.0% |
!!! | TTAGGTTTACTTTTAACTTA+TGG | + | chr3_3:35660507-35660526 | Msa0450300:intron | 20.0% |
!! | ATGACAAAAAACAAAAGTAA+TGG | - | chr3_3:35660565-35660584 | None:intergenic | 20.0% |
!!! | TTTAAAGCTAAATTATCAAC+AGG | + | chr3_3:35660987-35661006 | Msa0450300:intron | 20.0% |
!! | AAAAAGCTAATACAACATTA+AGG | - | chr3_3:35661340-35661359 | None:intergenic | 20.0% |
! | GATGATTCTATGTTCAATTA+TGG | + | chr3_3:35651189-35651208 | Msa0450300:CDS | 25.0% |
!!! | AATGAGTTTTATTCGATGAA+AGG | + | chr3_3:35651237-35651256 | Msa0450300:CDS | 25.0% |
! | TATTAAGAATGATGCTCAAA+AGG | + | chr3_3:35651710-35651729 | Msa0450300:CDS | 25.0% |
! | AAACAAGGAAAATATTAGAG+AGG | + | chr3_3:35651886-35651905 | Msa0450300:CDS | 25.0% |
! | AGCACATATAATAACTGTAA+AGG | - | chr3_3:35652011-35652030 | None:intergenic | 25.0% |
! | TTTATCAATATGCAAATCCA+AGG | + | chr3_3:35652052-35652071 | Msa0450300:intron | 25.0% |
! | AAATTAACACTTGAGATTAC+AGG | - | chr3_3:35652344-35652363 | None:intergenic | 25.0% |
! | AAAGGGTAATCTAATTGAAT+GGG | - | chr3_3:35652396-35652415 | None:intergenic | 25.0% |
! | AAAAGGGTAATCTAATTGAA+TGG | - | chr3_3:35652397-35652416 | None:intergenic | 25.0% |
! | CAACAGCAAAAAGAAAAAAA+GGG | - | chr3_3:35652413-35652432 | None:intergenic | 25.0% |
! | TCAACAGCAAAAAGAAAAAA+AGG | - | chr3_3:35652414-35652433 | None:intergenic | 25.0% |
!! | TATAAAATAAAAGTGTGGAG+CGG | + | chr3_3:35652853-35652872 | Msa0450300:CDS | 25.0% |
! | TTCCATCAAATAAATCAATG+AGG | + | chr3_3:35653255-35653274 | Msa0450300:CDS | 25.0% |
!! | ATGATGGAAATAGTTCAATT+TGG | + | chr3_3:35653330-35653349 | Msa0450300:CDS | 25.0% |
! | TGATGGAAATAGTTCAATTT+GGG | + | chr3_3:35653331-35653350 | Msa0450300:CDS | 25.0% |
!! | TATACACGAACATGTAATTT+TGG | + | chr3_3:35653526-35653545 | Msa0450300:intron | 25.0% |
!! | TCTACTCTGAAAACTTTATA+GGG | - | chr3_3:35653963-35653982 | None:intergenic | 25.0% |
!! | TTCTACTCTGAAAACTTTAT+AGG | - | chr3_3:35653964-35653983 | None:intergenic | 25.0% |
! | AACAAACGAGGTTAAAATAA+GGG | - | chr3_3:35654112-35654131 | None:intergenic | 25.0% |
! | AAACAAACGAGGTTAAAATA+AGG | - | chr3_3:35654113-35654132 | None:intergenic | 25.0% |
! | TTAAGAGCAAGTATTAGAAA+CGG | - | chr3_3:35654489-35654508 | None:intergenic | 25.0% |
! | TAAACACTAAAACTTTCATC+AGG | - | chr3_3:35654569-35654588 | None:intergenic | 25.0% |
! | AACTTGTATCTATTGATCTA+TGG | - | chr3_3:35654593-35654612 | None:intergenic | 25.0% |
! | AAATTGTGTACCTTTGAATT+GGG | + | chr3_3:35654646-35654665 | Msa0450300:intron | 25.0% |
! | AGAATAATTAACTGTCTGAT+GGG | + | chr3_3:35654760-35654779 | Msa0450300:intron | 25.0% |
! | ATGACGAATAAATAGCTAAA+CGG | + | chr3_3:35654783-35654802 | Msa0450300:intron | 25.0% |
! | AAATTATGGTCTATTGTGTT+AGG | - | chr3_3:35654912-35654931 | None:intergenic | 25.0% |
! | TGTAATTACACTCTCTTAAT+AGG | - | chr3_3:35655448-35655467 | None:intergenic | 25.0% |
! | AAATTCAATAATCCCCAAAT+TGG | + | chr3_3:35655563-35655582 | Msa0450300:intron | 25.0% |
! | TGTCTATGTTAATCCAATTT+GGG | - | chr3_3:35655579-35655598 | None:intergenic | 25.0% |
! | TTAGTTCAAAGAAAAAGATG+TGG | + | chr3_3:35655600-35655619 | Msa0450300:intron | 25.0% |
!!! | TTTTGTTATTGACATTCTAG+TGG | - | chr3_3:35655636-35655655 | None:intergenic | 25.0% |
! | ATCTCAATTAGCATCATAAT+TGG | - | chr3_3:35655853-35655872 | None:intergenic | 25.0% |
! | AATAATGTAATATTCGACAG+TGG | + | chr3_3:35656155-35656174 | Msa0450300:intron | 25.0% |
! | ATAATGTAATATTCGACAGT+GGG | + | chr3_3:35656156-35656175 | Msa0450300:intron | 25.0% |
! | AACAGAATTATTAACACAAG+TGG | + | chr3_3:35656277-35656296 | Msa0450300:intron | 25.0% |
! | CATCATACTATGTCATATAA+AGG | - | chr3_3:35656497-35656516 | None:intergenic | 25.0% |
! | TATTGTAGAGACTTATATTG+AGG | - | chr3_3:35656777-35656796 | None:intergenic | 25.0% |
! | TAAACTATCTTAACCACAAA+AGG | + | chr3_3:35656921-35656940 | Msa0450300:intron | 25.0% |
!! | TTAACATAATCATCCTTTTG+TGG | - | chr3_3:35656937-35656956 | None:intergenic | 25.0% |
! | ACTTATTGTAATCTCATTCA+AGG | + | chr3_3:35657291-35657310 | Msa0450300:intron | 25.0% |
!!! | TTATTCTAAGAGTTCTTTTC+TGG | - | chr3_3:35657785-35657804 | None:intergenic | 25.0% |
!! | AAGTTCTGTTTAGAATATTC+TGG | + | chr3_3:35657890-35657909 | Msa0450300:intron | 25.0% |
!! | GTTTAGAATATTCTGGAAAA+AGG | + | chr3_3:35657897-35657916 | Msa0450300:intron | 25.0% |
! | AAAGGATTTCACTTCTATAT+AGG | + | chr3_3:35657915-35657934 | Msa0450300:intron | 25.0% |
! | GTTAAGTCATCAAAATTTAG+TGG | - | chr3_3:35658080-35658099 | None:intergenic | 25.0% |
!!! | GATTCTGAAAATTTTCATAG+GGG | - | chr3_3:35658639-35658658 | None:intergenic | 25.0% |
! | GAAATCTTTGATCAAAGATT+TGG | + | chr3_3:35658676-35658695 | Msa0450300:intron | 25.0% |
! | AATCTTTGATCAAAGATTTG+GGG | + | chr3_3:35658678-35658697 | Msa0450300:intron | 25.0% |
!! | ATCAAGCATCGTTTAAATAA+AGG | + | chr3_3:35658903-35658922 | Msa0450300:intron | 25.0% |
! | ACACTAAAACTTTCATCAAT+TGG | - | chr3_3:35659044-35659063 | None:intergenic | 25.0% |
! | AACTTGTATCTATTGATCTA+TGG | - | chr3_3:35654593-35654612 | None:intergenic | 25.0% |
! | AAATTGTGTACCTTTGAATT+GGG | + | chr3_3:35654646-35654665 | Msa0450300:intron | 25.0% |
! | ATGACGAATAAATAGCTAAA+CGG | + | chr3_3:35654783-35654802 | Msa0450300:intron | 25.0% |
! | CATAAAACCAAAAGGTAAAT+AGG | - | chr3_3:35659533-35659552 | None:intergenic | 25.0% |
! | TTTCTTATAATGAGTGTTCA+GGG | + | chr3_3:35659561-35659580 | Msa0450300:intron | 25.0% |
! | GTTTCTTATAAAAAGACTAG+AGG | + | chr3_3:35659652-35659671 | Msa0450300:intron | 25.0% |
! | AACTTCATGTATGATATGAT+AGG | + | chr3_3:35659740-35659759 | Msa0450300:intron | 25.0% |
! | TCCTTACTTAGGTTATTATA+GGG | - | chr3_3:35659768-35659787 | None:intergenic | 25.0% |
! | CATAAATTAGTTGGCAATTA+AGG | - | chr3_3:35659887-35659906 | None:intergenic | 25.0% |
! | GAGAACAATATAAAAGAAGA+GGG | - | chr3_3:35659910-35659929 | None:intergenic | 25.0% |
! | AGAGAACAATATAAAAGAAG+AGG | - | chr3_3:35659911-35659930 | None:intergenic | 25.0% |
! | GATTTCTTAGAATTCTAACT+AGG | + | chr3_3:35660263-35660282 | Msa0450300:intron | 25.0% |
! | CAATCCAACATACAATTTAT+TGG | - | chr3_3:35660292-35660311 | None:intergenic | 25.0% |
! | CAACTTGTATGGTAATATTT+AGG | + | chr3_3:35660489-35660508 | Msa0450300:intron | 25.0% |
! | ACAAAAAACAAAAGTAATGG+AGG | - | chr3_3:35660562-35660581 | None:intergenic | 25.0% |
!! | TTCTTTTACTAGGCAAAATT+GGG | - | chr3_3:35660598-35660617 | None:intergenic | 25.0% |
!! | ATTCTTTTACTAGGCAAAAT+TGG | - | chr3_3:35660599-35660618 | None:intergenic | 25.0% |
!!! | TTGTGTATGTAGTCATTTTT+TGG | + | chr3_3:35661438-35661457 | Msa0450300:three_prime_UTR | 25.0% |
!!! | TGTGTATGTAGTCATTTTTT+GGG | + | chr3_3:35661439-35661458 | Msa0450300:three_prime_UTR | 25.0% |
ATTAATGAGAAGTTTACGTG+AGG | - | chr3_3:35650685-35650704 | None:intergenic | 30.0% | |
! | AATCGCAAGAATTTTCGATA+CGG | + | chr3_3:35650985-35651004 | Msa0450300:CDS | 30.0% |
ACAGAAGAATTCATAAGCAA+CGG | - | chr3_3:35651339-35651358 | None:intergenic | 30.0% | |
!! | AATAATCGAGTTGAAGAAGA+TGG | + | chr3_3:35651450-35651469 | Msa0450300:CDS | 30.0% |
!! | ATAATCGAGTTGAAGAAGAT+GGG | + | chr3_3:35651451-35651470 | Msa0450300:CDS | 30.0% |
! | ACAAAAAATATTGGTGATCG+AGG | + | chr3_3:35651534-35651553 | Msa0450300:CDS | 30.0% |
TCAGAAGAGTTTCAATATCA+CGG | + | chr3_3:35651656-35651675 | Msa0450300:CDS | 30.0% | |
ATCCACATTCTCTATATGAA+CGG | - | chr3_3:35651817-35651836 | None:intergenic | 30.0% | |
AAAAAGTCACGTGATATCTA+AGG | + | chr3_3:35651935-35651954 | Msa0450300:CDS | 30.0% | |
ACTATAACTTGAAACACAAC+AGG | - | chr3_3:35651981-35652000 | None:intergenic | 30.0% | |
TTGTAGTTATAGTTGAGTAG+TGG | + | chr3_3:35652082-35652101 | Msa0450300:intron | 30.0% | |
ACTAAAATGGCATAATGTTC+AGG | + | chr3_3:35652256-35652275 | Msa0450300:intron | 30.0% | |
TGAAACATTAAACCCTGTAT+AGG | - | chr3_3:35652517-35652536 | None:intergenic | 30.0% | |
TCACTAAATATTGCAGATAG+AGG | + | chr3_3:35652534-35652553 | Msa0450300:intron | 30.0% | |
CAATCCTATCTATTCTTCTT+GGG | - | chr3_3:35652756-35652775 | None:intergenic | 30.0% | |
TCAATCCTATCTATTCTTCT+TGG | - | chr3_3:35652757-35652776 | None:intergenic | 30.0% | |
AAGAATAGATAGGATTGAAG+TGG | + | chr3_3:35652759-35652778 | Msa0450300:CDS | 30.0% | |
TGTTTCTTTCAGTGAAAGAT+TGG | + | chr3_3:35652807-35652826 | Msa0450300:CDS | 30.0% | |
! | AAATCCTTATTTAACGAGCA+AGG | + | chr3_3:35652937-35652956 | Msa0450300:CDS | 30.0% |
TCTCTTCGCAATAATATCAA+GGG | - | chr3_3:35653025-35653044 | None:intergenic | 30.0% | |
TTCTCTTCGCAATAATATCA+AGG | - | chr3_3:35653026-35653045 | None:intergenic | 30.0% | |
!! | TGCCTCATTGATTTATTTGA+TGG | - | chr3_3:35653260-35653279 | None:intergenic | 30.0% |
GAATATTGGATGAAACTAGT+GGG | - | chr3_3:35653564-35653583 | None:intergenic | 30.0% | |
AGAATATTGGATGAAACTAG+TGG | - | chr3_3:35653565-35653584 | None:intergenic | 30.0% | |
ACATGCATCAGAAAGAATAT+TGG | - | chr3_3:35653578-35653597 | None:intergenic | 30.0% | |
TTTCTATCTCTTCTCTTTGT+TGG | + | chr3_3:35653642-35653661 | Msa0450300:intron | 30.0% | |
TTCTATCTCTTCTCTTTGTT+GGG | + | chr3_3:35653643-35653662 | Msa0450300:intron | 30.0% | |
TTTGCATCTACAGTAAACAT+TGG | + | chr3_3:35653738-35653757 | Msa0450300:intron | 30.0% | |
TTGCATCTACAGTAAACATT+GGG | + | chr3_3:35653739-35653758 | Msa0450300:intron | 30.0% | |
! | CTACTCTGAAAACTTTATAG+GGG | - | chr3_3:35653962-35653981 | None:intergenic | 30.0% |
!! | TCTTTTATGCTACTTAGTTG+AGG | + | chr3_3:35654046-35654065 | Msa0450300:intron | 30.0% |
!! | CTTTTATGCTACTTAGTTGA+GGG | + | chr3_3:35654047-35654066 | Msa0450300:intron | 30.0% |
ACAAACGAGGTTAAAATAAG+GGG | - | chr3_3:35654111-35654130 | None:intergenic | 30.0% | |
GAGAAATTTCAAAACAAACG+AGG | - | chr3_3:35654124-35654143 | None:intergenic | 30.0% | |
ATGAGTGTCAGGAAAAAAAT+AGG | + | chr3_3:35654216-35654235 | Msa0450300:CDS | 30.0% | |
! | ATACATTTTTGTGTCTTTGC+TGG | + | chr3_3:35654398-35654417 | Msa0450300:intron | 30.0% |
AGGCAAAACATGAGAAAATT+CGG | - | chr3_3:35654549-35654568 | None:intergenic | 30.0% | |
GAAATTGTGTACCTTTGAAT+TGG | + | chr3_3:35654645-35654664 | Msa0450300:intron | 30.0% | |
CAGAATAATTAACTGTCTGA+TGG | + | chr3_3:35654759-35654778 | Msa0450300:intron | 30.0% | |
ATTGGGCTATTGTTACTAAA+TGG | - | chr3_3:35654863-35654882 | None:intergenic | 30.0% | |
! | GTTGATGAATTTGAGTGATT+GGG | - | chr3_3:35654880-35654899 | None:intergenic | 30.0% |
!! | AGTTGATGAATTTGAGTGAT+TGG | - | chr3_3:35654881-35654900 | None:intergenic | 30.0% |
!!! | GTATGATTTGTTTTCCCTAT+CGG | - | chr3_3:35655155-35655174 | None:intergenic | 30.0% |
ATAGGGAAAACAAATCATAC+AGG | + | chr3_3:35655155-35655174 | Msa0450300:intron | 30.0% | |
!!! | CTACAATATTTTGGGTTAGT+GGG | - | chr3_3:35655290-35655309 | None:intergenic | 30.0% |
!!! | TCTACAATATTTTGGGTTAG+TGG | - | chr3_3:35655291-35655310 | None:intergenic | 30.0% |
TACTCATATATACAAGTCTG+TGG | + | chr3_3:35655337-35655356 | Msa0450300:intron | 30.0% | |
CTGTAATATTGAAAACCCAT+TGG | - | chr3_3:35655375-35655394 | None:intergenic | 30.0% | |
TTACTATTCATGTACCTATG+TGG | - | chr3_3:35655409-35655428 | None:intergenic | 30.0% | |
GTCTATGTTAATCCAATTTG+GGG | - | chr3_3:35655578-35655597 | None:intergenic | 30.0% | |
GTGTCTATGTTAATCCAATT+TGG | - | chr3_3:35655580-35655599 | None:intergenic | 30.0% | |
! | GAAAAAGATGTGGATTAATG+TGG | + | chr3_3:35655610-35655629 | Msa0450300:intron | 30.0% |
AGTATGATATTGTGTTCTTG+TGG | - | chr3_3:35655690-35655709 | None:intergenic | 30.0% | |
AACACAATATCATACTCGAT+AGG | + | chr3_3:35655694-35655713 | Msa0450300:intron | 30.0% | |
! | ATTGATGACCTCATAAAATG+TGG | + | chr3_3:35655745-35655764 | Msa0450300:intron | 30.0% |
! | GATGCTTAAGTCAATTTTGT+TGG | - | chr3_3:35655831-35655850 | None:intergenic | 30.0% |
TATATATATGTGGGATCAGT+GGG | - | chr3_3:35656084-35656103 | None:intergenic | 30.0% | |
TTATATATATGTGGGATCAG+TGG | - | chr3_3:35656085-35656104 | None:intergenic | 30.0% | |
ATGCTTATGTGCAAAATATG+TGG | - | chr3_3:35656257-35656276 | None:intergenic | 30.0% | |
TTAACCACATATTCTGCATT+TGG | + | chr3_3:35656377-35656396 | Msa0450300:intron | 30.0% | |
! | ATATTCTGCATTTGGAATCA+AGG | + | chr3_3:35656385-35656404 | Msa0450300:intron | 30.0% |
!!! | CTGATTTTTTCTCAAATGTG+TGG | - | chr3_3:35656641-35656660 | None:intergenic | 30.0% |
CACACATTTGAGAAAAAATC+AGG | + | chr3_3:35656639-35656658 | Msa0450300:intron | 30.0% | |
! | AGAATGATATTTTCTCCACT+TGG | + | chr3_3:35656884-35656903 | Msa0450300:intron | 30.0% |
! | TGATTAGTTCTCTATCAAGT+GGG | - | chr3_3:35657018-35657037 | None:intergenic | 30.0% |
! | ATGATTAGTTCTCTATCAAG+TGG | - | chr3_3:35657019-35657038 | None:intergenic | 30.0% |
ATTAATAACAACACACCGAT+AGG | + | chr3_3:35657449-35657468 | Msa0450300:intron | 30.0% | |
TTAATAACAACACACCGATA+GGG | + | chr3_3:35657450-35657469 | Msa0450300:intron | 30.0% | |
AATAAGCAATAAGTCACAAG+AGG | + | chr3_3:35657994-35658013 | Msa0450300:intron | 30.0% | |
!! | ATTTAGTGGCTCTAAGTATA+AGG | - | chr3_3:35658066-35658085 | None:intergenic | 30.0% |
! | TTAACGGATAAACAACAAAG+AGG | + | chr3_3:35658281-35658300 | Msa0450300:intron | 30.0% |
GGATTAAACAATAAGTCTGA+GGG | + | chr3_3:35658856-35658875 | Msa0450300:intron | 30.0% | |
! | ATAAAGGCATAAGAAATACC+AGG | + | chr3_3:35658919-35658938 | Msa0450300:intron | 30.0% |
ATCGTATAATGGTTCATTCA+AGG | + | chr3_3:35658942-35658961 | Msa0450300:intron | 30.0% | |
TTTCAATTATACGACTACGA+AGG | + | chr3_3:35658969-35658988 | Msa0450300:intron | 30.0% | |
AGCCATAACATGTATCTAAT+TGG | + | chr3_3:35659010-35659029 | Msa0450300:intron | 30.0% | |
AGCCAATTAGATACATGTTA+TGG | - | chr3_3:35659015-35659034 | None:intergenic | 30.0% | |
GAAATTGTGTACCTTTGAAT+TGG | + | chr3_3:35654645-35654664 | Msa0450300:intron | 30.0% | |
AGAATAATTAACCGTCTGAT+GGG | + | chr3_3:35659238-35659257 | Msa0450300:intron | 30.0% | |
ATTGGGCTATTGTTACTAAA+TGG | - | chr3_3:35654863-35654882 | None:intergenic | 30.0% | |
! | GTTGATGAATTTGAGTGATT+GGG | - | chr3_3:35654880-35654899 | None:intergenic | 30.0% |
!! | AGTTGATGAATTTGAGTGAT+TGG | - | chr3_3:35654881-35654900 | None:intergenic | 30.0% |
GTTTCTTATAATGAGTGTTC+AGG | + | chr3_3:35659560-35659579 | Msa0450300:intron | 30.0% | |
AATCTTGCTCTAACTGATTA+TGG | + | chr3_3:35659699-35659718 | Msa0450300:intron | 30.0% | |
CCTTACTTAGGTTATTATAG+GGG | - | chr3_3:35659767-35659786 | None:intergenic | 30.0% | |
CTCCTTACTTAGGTTATTAT+AGG | - | chr3_3:35659769-35659788 | None:intergenic | 30.0% | |
! | CTTTTTCTTTCTCCTTACTT+AGG | - | chr3_3:35659779-35659798 | None:intergenic | 30.0% |
CTAAGTAAGGAGAAAGAAAA+AGG | + | chr3_3:35659777-35659796 | Msa0450300:intron | 30.0% | |
TAAGGGTAATAAAACATGCA+AGG | - | chr3_3:35659869-35659888 | None:intergenic | 30.0% | |
!!! | TCACTTTTGAAGTCTTTATG+TGG | + | chr3_3:35659982-35660001 | Msa0450300:intron | 30.0% |
CTGTACTATAGAATTAGTTG+AGG | + | chr3_3:35660219-35660238 | Msa0450300:intron | 30.0% | |
AGTGAAAAAAGCAACTTGTA+TGG | + | chr3_3:35660478-35660497 | Msa0450300:intron | 30.0% | |
ATAGCAATTGGATGATAAAC+TGG | - | chr3_3:35660633-35660652 | None:intergenic | 30.0% | |
!! | AACATAACTTGTTGCTAAGT+TGG | + | chr3_3:35660686-35660705 | Msa0450300:intron | 30.0% |
GACTAAAATGCATGGTTTAT+TGG | + | chr3_3:35660736-35660755 | Msa0450300:intron | 30.0% | |
ATTCATTTAAATGACCAACC+TGG | + | chr3_3:35660811-35660830 | Msa0450300:intron | 30.0% | |
TTGGATTCATATGGGTATAT+GGG | + | chr3_3:35660867-35660886 | Msa0450300:intron | 30.0% | |
AAGCTAAATTATCAACAGGA+AGG | + | chr3_3:35660991-35661010 | Msa0450300:intron | 30.0% | |
AATAATCCAGAGAGAAACTT+AGG | - | chr3_3:35661213-35661232 | None:intergenic | 30.0% | |
AGGCGAAAATATCATCTTAA+TGG | + | chr3_3:35661269-35661288 | Msa0450300:CDS | 30.0% | |
GGCGAAAATATCATCTTAAT+GGG | + | chr3_3:35661270-35661289 | Msa0450300:CDS | 30.0% | |
TCATAAAGAATTGCTTGGTA+AGG | - | chr3_3:35661298-35661317 | None:intergenic | 30.0% | |
TCTGATCATAAAGAATTGCT+TGG | - | chr3_3:35661303-35661322 | None:intergenic | 30.0% | |
! | AAGATGTGCAACATATTTTG+TGG | - | chr3_3:35661394-35661413 | None:intergenic | 30.0% |
CAAAATATGTTGCACATCTT+AGG | + | chr3_3:35661394-35661413 | Msa0450300:three_prime_UTR | 30.0% | |
!!! | GTGTATGTAGTCATTTTTTG+GGG | + | chr3_3:35661440-35661459 | Msa0450300:three_prime_UTR | 30.0% |
ACCAGGTTTCAAATCATGAA+CGG | + | chr3_3:35650730-35650749 | Msa0450300:intron | 35.0% | |
AGAAGAAGCGAAATCGATAT+CGG | - | chr3_3:35650944-35650963 | None:intergenic | 35.0% | |
!! | TCGAGTGGATTGGAATTATA+CGG | + | chr3_3:35651009-35651028 | Msa0450300:CDS | 35.0% |
! | AATGAAAATGGTGGTGAAGT+TGG | + | chr3_3:35651114-35651133 | Msa0450300:CDS | 35.0% |
! | ATGAAAATGGTGGTGAAGTT+GGG | + | chr3_3:35651115-35651134 | Msa0450300:CDS | 35.0% |
TCTATGTTCAATTATGGGAG+TGG | + | chr3_3:35651195-35651214 | Msa0450300:CDS | 35.0% | |
AGTGTGACTTTATATGGAGA+AGG | + | chr3_3:35651294-35651313 | Msa0450300:CDS | 35.0% | |
GTTGCTTATGAATTCTTCTG+TGG | + | chr3_3:35651338-35651357 | Msa0450300:CDS | 35.0% | |
! | ATGAATTCTTCTGTGGCTTT+TGG | + | chr3_3:35651345-35651364 | Msa0450300:CDS | 35.0% |
!!! | GGCTTTTGGTTCAAATGATT+TGG | + | chr3_3:35651359-35651378 | Msa0450300:CDS | 35.0% |
ATTCAAAATGGTCCAGTTTC+TGG | + | chr3_3:35651393-35651412 | Msa0450300:CDS | 35.0% | |
ACTCGATTATTACTTTCTCG+TGG | - | chr3_3:35651441-35651460 | None:intergenic | 35.0% | |
!! | TAATCGAGTTGAAGAAGATG+GGG | + | chr3_3:35651452-35651471 | Msa0450300:CDS | 35.0% |
TTCTGATCGAAAAGAAGAGA+AGG | + | chr3_3:35651479-35651498 | Msa0450300:CDS | 35.0% | |
GTGATATTGAAACTCTTCTG+AGG | - | chr3_3:35651657-35651676 | None:intergenic | 35.0% | |
AAGAGTTTCAATATCACGGA+TGG | + | chr3_3:35651660-35651679 | Msa0450300:CDS | 35.0% | |
TGATGCTCAAAAGGAAAATC+TGG | + | chr3_3:35651719-35651738 | Msa0450300:CDS | 35.0% | |
CTCTATATGAACGGATACAT+TGG | - | chr3_3:35651808-35651827 | None:intergenic | 35.0% | |
ATCCGTTCATATAGAGAATG+TGG | + | chr3_3:35651812-35651831 | Msa0450300:CDS | 35.0% | |
TTCTAACACATTTGTCGAAG+TGG | - | chr3_3:35651916-35651935 | None:intergenic | 35.0% | |
! | GGAAATGGAAGAAATTTTGC+TGG | + | chr3_3:35652594-35652613 | Msa0450300:CDS | 35.0% |
! | AGAAATTTTGCTGGAGTCTA+TGG | + | chr3_3:35652603-35652622 | Msa0450300:CDS | 35.0% |
ATCAAACATTCTGTTACCCA+CGG | - | chr3_3:35652650-35652669 | None:intergenic | 35.0% | |
ATAGATAGGATTGAAGTGGT+AGG | + | chr3_3:35652763-35652782 | Msa0450300:CDS | 35.0% | |
TCTTTCAGTGAAAGATTGGT+TGG | + | chr3_3:35652811-35652830 | Msa0450300:CDS | 35.0% | |
! | CTTTCAGTGAAAGATTGGTT+GGG | + | chr3_3:35652812-35652831 | Msa0450300:CDS | 35.0% |
! | TTTCAGTGAAAGATTGGTTG+GGG | + | chr3_3:35652813-35652832 | Msa0450300:CDS | 35.0% |
!!! | TCTTTTTCAACAGAAGACCA+AGG | - | chr3_3:35652979-35652998 | None:intergenic | 35.0% |
! | TCTCTGTCTTCTTTTACAAG+AGG | + | chr3_3:35653176-35653195 | Msa0450300:CDS | 35.0% |
! | CTCTGTCTTCTTTTACAAGA+GGG | + | chr3_3:35653177-35653196 | Msa0450300:CDS | 35.0% |
ATATTCGAAACTCTTCCACT+TGG | + | chr3_3:35653204-35653223 | Msa0450300:CDS | 35.0% | |
TATTCGAAACTCTTCCACTT+GGG | + | chr3_3:35653205-35653224 | Msa0450300:CDS | 35.0% | |
TTCCATCATCAAAATGCCTA+TGG | - | chr3_3:35653319-35653338 | None:intergenic | 35.0% | |
! | TGGGATTTTGTACAGACATT+TGG | + | chr3_3:35653350-35653369 | Msa0450300:CDS | 35.0% |
! | ATTTTGTACAGACATTTGGC+TGG | + | chr3_3:35653354-35653373 | Msa0450300:CDS | 35.0% |
! | TTTTGTACAGACATTTGGCT+GGG | + | chr3_3:35653355-35653374 | Msa0450300:CDS | 35.0% |
AGACTGCAGTTTCATTTGTA+TGG | - | chr3_3:35653430-35653449 | None:intergenic | 35.0% | |
! | AGCAAGGGTTTTACATCATT+GGG | + | chr3_3:35653454-35653473 | Msa0450300:CDS | 35.0% |
TTTGTTGGGTACAAAAAGCT+TGG | + | chr3_3:35653657-35653676 | Msa0450300:intron | 35.0% | |
! | TCCTTGTTATATTCACCTAC+TGG | + | chr3_3:35653890-35653909 | Msa0450300:intron | 35.0% |
TCCAGTAGGTGAATATAACA+AGG | - | chr3_3:35653894-35653913 | None:intergenic | 35.0% | |
!! | GATTTAGCTGTCATTGACTT+GGG | + | chr3_3:35653912-35653931 | Msa0450300:intron | 35.0% |
GTTTGAATCCGATGTCATAA+AGG | + | chr3_3:35653934-35653953 | Msa0450300:intron | 35.0% | |
AAACAATTGCACGACTTAAG+AGG | + | chr3_3:35653990-35654009 | Msa0450300:intron | 35.0% | |
! | TGTTGATAGACCTCAAGAAT+GGG | - | chr3_3:35654266-35654285 | None:intergenic | 35.0% |
! | TTGTTGATAGACCTCAAGAA+TGG | - | chr3_3:35654267-35654286 | None:intergenic | 35.0% |
TTCTTGAGGTCTATCAACAA+TGG | + | chr3_3:35654267-35654286 | Msa0450300:CDS | 35.0% | |
TCAACAATGGAGTTGGAAAT+CGG | + | chr3_3:35654280-35654299 | Msa0450300:CDS | 35.0% | |
GATTTGATTGATCTGTCCAA+AGG | + | chr3_3:35654342-35654361 | Msa0450300:CDS | 35.0% | |
ACCGAAATTCACATTCTGAT+CGG | + | chr3_3:35654510-35654529 | Msa0450300:intron | 35.0% | |
ACCGATCAGAATGTGAATTT+CGG | - | chr3_3:35654514-35654533 | None:intergenic | 35.0% | |
AATAAATAGCTAAACGGCTG+AGG | + | chr3_3:35654789-35654808 | Msa0450300:intron | 35.0% | |
ATAAATAGCTAAACGGCTGA+GGG | + | chr3_3:35654790-35654809 | Msa0450300:intron | 35.0% | |
ATTTAGATAAGCCCAATGAG+AGG | - | chr3_3:35654822-35654841 | None:intergenic | 35.0% | |
TCTCATTGGGCTTATCTAAA+TGG | + | chr3_3:35654821-35654840 | Msa0450300:intron | 35.0% | |
! | TTGAGTATTGTCATCCAAGT+GGG | - | chr3_3:35655012-35655031 | None:intergenic | 35.0% |
! | ATTGAGTATTGTCATCCAAG+TGG | - | chr3_3:35655013-35655032 | None:intergenic | 35.0% |
TGCAGAAATTGAATCCGATA+GGG | + | chr3_3:35655138-35655157 | Msa0450300:intron | 35.0% | |
AAGAATGTGTCATCCAAGAA+TGG | + | chr3_3:35655233-35655252 | Msa0450300:intron | 35.0% | |
ATATACAAGTCTGTGGTTAG+TGG | + | chr3_3:35655344-35655363 | Msa0450300:intron | 35.0% | |
CAGAAGTCATATATCCACAT+AGG | + | chr3_3:35655392-35655411 | Msa0450300:intron | 35.0% | |
! | CCAACATTCCACATTTTATG+AGG | - | chr3_3:35655756-35655775 | None:intergenic | 35.0% |
CCTCATAAAATGTGGAATGT+TGG | + | chr3_3:35655753-35655772 | Msa0450300:intron | 35.0% | |
GAATATGCACAATAACGTCT+TGG | - | chr3_3:35655809-35655828 | None:intergenic | 35.0% | |
! | ATAGTGTGCACAAGAGTATA+CGG | + | chr3_3:35655950-35655969 | Msa0450300:intron | 35.0% |
TTAACACAAGTGGTAACTCA+AGG | + | chr3_3:35656287-35656306 | Msa0450300:intron | 35.0% | |
TGGCAGATATCATCAAGAAT+TGG | + | chr3_3:35656345-35656364 | Msa0450300:intron | 35.0% | |
GGCAGATATCATCAAGAATT+GGG | + | chr3_3:35656346-35656365 | Msa0450300:intron | 35.0% | |
GATTCCAAATGCAGAATATG+TGG | - | chr3_3:35656384-35656403 | None:intergenic | 35.0% | |
! | ATGATATTTTCTCCACTTGG+TGG | + | chr3_3:35656887-35656906 | Msa0450300:intron | 35.0% |
TTAAGCAATGTCATACCGAT+AGG | + | chr3_3:35656953-35656972 | Msa0450300:intron | 35.0% | |
TAAGCAATGTCATACCGATA+GGG | + | chr3_3:35656954-35656973 | Msa0450300:intron | 35.0% | |
CTATGTATTGTGTAACGTGA+TGG | - | chr3_3:35656985-35657004 | None:intergenic | 35.0% | |
TAAAGTAACGTCACATCGAT+AGG | + | chr3_3:35657111-35657130 | Msa0450300:intron | 35.0% | |
AAAGTAACGTCACATCGATA+GGG | + | chr3_3:35657112-35657131 | Msa0450300:intron | 35.0% | |
AATCTCATTCAAGGACCTTA+AGG | + | chr3_3:35657300-35657319 | Msa0450300:intron | 35.0% | |
TGCATAATTGTATCCACGAT+AGG | + | chr3_3:35657515-35657534 | Msa0450300:intron | 35.0% | |
AATTGTAATCTCACCTATCG+TGG | - | chr3_3:35657531-35657550 | None:intergenic | 35.0% | |
ATGGTATATGATTCGATGCT+TGG | + | chr3_3:35658753-35658772 | Msa0450300:intron | 35.0% | |
GGGATTAAACAATAAGTCTG+AGG | + | chr3_3:35658855-35658874 | Msa0450300:intron | 35.0% | |
GAAATACCAGGATCGTATAA+TGG | + | chr3_3:35658931-35658950 | Msa0450300:intron | 35.0% | |
AATGAACCATTATACGATCC+TGG | - | chr3_3:35658940-35658959 | None:intergenic | 35.0% | |
CAGAATAATTAACCGTCTGA+TGG | + | chr3_3:35659237-35659256 | Msa0450300:intron | 35.0% | |
AATAAATAGCTAAACGGCTG+AGG | + | chr3_3:35654789-35654808 | Msa0450300:intron | 35.0% | |
ATAAATAGCTAAACGGCTGA+GGG | + | chr3_3:35654790-35654809 | Msa0450300:intron | 35.0% | |
ATTTAGATAAGCCCAATGAG+AGG | - | chr3_3:35654822-35654841 | None:intergenic | 35.0% | |
! | GAGGTAGACTTTTGCAATAA+AGG | - | chr3_3:35659506-35659525 | None:intergenic | 35.0% |
AACCAAAAGGTAAATAGGAC+TGG | - | chr3_3:35659528-35659547 | None:intergenic | 35.0% | |
CCAACTTGCATAAAACCAAA+AGG | - | chr3_3:35659541-35659560 | None:intergenic | 35.0% | |
!!! | CCTTTTGGTTTTATGCAAGT+TGG | + | chr3_3:35659538-35659557 | Msa0450300:intron | 35.0% |
! | AACCAAGGAAGCATATTCAA+AGG | - | chr3_3:35659615-35659634 | None:intergenic | 35.0% |
AAGACTTATCACGAAAACCA+AGG | - | chr3_3:35659630-35659649 | None:intergenic | 35.0% | |
CCCCTATAATAACCTAAGTA+AGG | + | chr3_3:35659764-35659783 | Msa0450300:intron | 35.0% | |
!! | AGAAAGAAAAAGGTTGATGC+AGG | + | chr3_3:35659787-35659806 | Msa0450300:intron | 35.0% |
!! | GAAAGAAAAAGGTTGATGCA+GGG | + | chr3_3:35659788-35659807 | Msa0450300:intron | 35.0% |
! | AGAAGAGGGCATAAATTAGT+TGG | - | chr3_3:35659896-35659915 | None:intergenic | 35.0% |
AAGACTTCAAAAGTGATCAC+TGG | - | chr3_3:35659978-35659997 | None:intergenic | 35.0% | |
TATGTGGAATTCCCTATATC+TGG | + | chr3_3:35659998-35660017 | Msa0450300:intron | 35.0% | |
ATTGATCAGTAATGTGTTCC+AGG | - | chr3_3:35660091-35660110 | None:intergenic | 35.0% | |
ATGGGAAAATGAGAGAAGAT+GGG | - | chr3_3:35660169-35660188 | None:intergenic | 35.0% | |
AATGGGAAAATGAGAGAAGA+TGG | - | chr3_3:35660170-35660189 | None:intergenic | 35.0% | |
! | TTCTCTCATTTTCCCATTTC+AGG | + | chr3_3:35660172-35660191 | Msa0450300:CDS | 35.0% |
GACAGATACAAACCTGAAAT+GGG | - | chr3_3:35660187-35660206 | None:intergenic | 35.0% | |
TGACAGATACAAACCTGAAA+TGG | - | chr3_3:35660188-35660207 | None:intergenic | 35.0% | |
GCTCCCAATAAATTGTATGT+TGG | + | chr3_3:35660285-35660304 | Msa0450300:intron | 35.0% | |
ACTATGCAAAAAGACTTCAC+AGG | + | chr3_3:35660340-35660359 | Msa0450300:intron | 35.0% | |
!! | TGCTAAGTTGGTCATCTTAA+AGG | + | chr3_3:35660698-35660717 | Msa0450300:intron | 35.0% |
TTAAAGGACTTGTGACATGT+AGG | + | chr3_3:35660714-35660733 | Msa0450300:intron | 35.0% | |
ACATGTAGGACTAAAATGCA+TGG | + | chr3_3:35660728-35660747 | Msa0450300:intron | 35.0% | |
AATTCAATTGACATGTTGCC+AGG | - | chr3_3:35660832-35660851 | None:intergenic | 35.0% | |
!! | AATTTTCTGCAGTCTAGAGT+TGG | + | chr3_3:35660848-35660867 | Msa0450300:intron | 35.0% |
! | AGTCTAGAGTTGGATTCATA+TGG | + | chr3_3:35660858-35660877 | Msa0450300:intron | 35.0% |
! | GTCTAGAGTTGGATTCATAT+GGG | + | chr3_3:35660859-35660878 | Msa0450300:intron | 35.0% |
GTTGGATTCATATGGGTATA+TGG | + | chr3_3:35660866-35660885 | Msa0450300:intron | 35.0% | |
TGGATTCATATGGGTATATG+GGG | + | chr3_3:35660868-35660887 | Msa0450300:intron | 35.0% | |
!! | TAAATATGTGGAGGCATTAG+AGG | - | chr3_3:35660912-35660931 | None:intergenic | 35.0% |
ACAAGAGAGTAAATATGTGG+AGG | - | chr3_3:35660921-35660940 | None:intergenic | 35.0% | |
CTGACAAGAGAGTAAATATG+TGG | - | chr3_3:35660924-35660943 | None:intergenic | 35.0% | |
TATTTACTCTCTTGTCAGTC+TGG | + | chr3_3:35660926-35660945 | Msa0450300:intron | 35.0% | |
!! | GCTTTCTAAAGCAACGTTTA+TGG | - | chr3_3:35661053-35661072 | None:intergenic | 35.0% |
!!! | AAAGGAGCTTTTGACTTGTT+AGG | + | chr3_3:35661162-35661181 | Msa0450300:CDS | 35.0% |
AAGAAAAGCCTGAGAAAACA+AGG | + | chr3_3:35661238-35661257 | Msa0450300:CDS | 35.0% | |
AGAAAAGCCTGAGAAAACAA+GGG | + | chr3_3:35661239-35661258 | Msa0450300:CDS | 35.0% | |
CCAGGTTTCAAATCATGAAC+GGG | + | chr3_3:35650731-35650750 | Msa0450300:intron | 40.0% | |
GAAATCGTGGAAAACGGTAA+CGG | - | chr3_3:35650920-35650939 | None:intergenic | 40.0% | |
ATCGGAGAAATCGTGGAAAA+CGG | - | chr3_3:35650926-35650945 | None:intergenic | 40.0% | |
AATCGATATCGGAGAAATCG+TGG | - | chr3_3:35650933-35650952 | None:intergenic | 40.0% | |
! | AATTTTCGATACGGTTCGAG+TGG | + | chr3_3:35650994-35651013 | Msa0450300:CDS | 40.0% |
TTGGAATTATACGGTGACGA+TGG | + | chr3_3:35651018-35651037 | Msa0450300:CDS | 40.0% | |
! | TCGGAGTTGATTGGAAATGA+CGG | + | chr3_3:35651072-35651091 | Msa0450300:CDS | 40.0% |
ACGGAATTGAAGAATCTGCT+GGG | + | chr3_3:35651091-35651110 | Msa0450300:CDS | 40.0% | |
GAATCTGCTGGGAATGAAAA+TGG | + | chr3_3:35651102-35651121 | Msa0450300:CDS | 40.0% | |
! | TGAAAATGGTGGTGAAGTTG+GGG | + | chr3_3:35651116-35651135 | Msa0450300:CDS | 40.0% |
! | GGATGAGGAAGAGGAATTTT+CGG | + | chr3_3:35651161-35651180 | Msa0450300:CDS | 40.0% |
AATTATGGGAGTGGTTGTGA+TGG | + | chr3_3:35651204-35651223 | Msa0450300:CDS | 40.0% | |
!!! | CGAGTGAGTTTTATTCTTCG+AGG | + | chr3_3:35651271-35651290 | Msa0450300:CDS | 40.0% |
! | TCGAGGAGTGTGACTTTATA+TGG | + | chr3_3:35651288-35651307 | Msa0450300:CDS | 40.0% |
TTTAGAAGAGGTGAGGGATA+GGG | + | chr3_3:35651560-35651579 | Msa0450300:CDS | 40.0% | |
AGTTTCAATATCACGGATGG+TGG | + | chr3_3:35651663-35651682 | Msa0450300:CDS | 40.0% | |
ATTGCAGCATTATGCAGTTG+TGG | + | chr3_3:35652147-35652166 | Msa0450300:intron | 40.0% | |
TAATGTTCAGGAAGACCAAC+TGG | + | chr3_3:35652268-35652287 | Msa0450300:intron | 40.0% | |
AATGTTCAGGAAGACCAACT+GGG | + | chr3_3:35652269-35652288 | Msa0450300:intron | 40.0% | |
TTGCCCTCTCATGAAAAAGA+TGG | + | chr3_3:35652439-35652458 | Msa0450300:intron | 40.0% | |
!! | CCACCATCTTTTTCATGAGA+GGG | - | chr3_3:35652445-35652464 | None:intergenic | 40.0% |
!! | TCCACCATCTTTTTCATGAG+AGG | - | chr3_3:35652446-35652465 | None:intergenic | 40.0% |
GCTAAGTGAATTCTATGACG+AGG | + | chr3_3:35652564-35652583 | Msa0450300:CDS | 40.0% | |
ATTCTATGACGAGGTTGTTC+AGG | + | chr3_3:35652573-35652592 | Msa0450300:CDS | 40.0% | |
TACAGTCTATTCTCTGTTCC+AGG | + | chr3_3:35653067-35653086 | Msa0450300:CDS | 40.0% | |
CAAAACCAAACAAGTGCTCT+TGG | - | chr3_3:35653108-35653127 | None:intergenic | 40.0% | |
GTAAAAGAAGACAGAGACAC+TGG | - | chr3_3:35653173-35653192 | None:intergenic | 40.0% | |
ATTCGAAACTCTTCCACTTG+GGG | + | chr3_3:35653206-35653225 | Msa0450300:CDS | 40.0% | |
!! | TGCCATAGGCATTTTGATGA+TGG | + | chr3_3:35653314-35653333 | Msa0450300:CDS | 40.0% |
TTTGTACAGACATTTGGCTG+GGG | + | chr3_3:35653356-35653375 | Msa0450300:CDS | 40.0% | |
CCAGTATATTCACAAAGTCG+AGG | - | chr3_3:35653386-35653405 | None:intergenic | 40.0% | |
CCTCGACTTTGTGAATATAC+TGG | + | chr3_3:35653383-35653402 | Msa0450300:CDS | 40.0% | |
CAATGATGTAAAACCCTTGC+TGG | - | chr3_3:35653455-35653474 | None:intergenic | 40.0% | |
! | CAGCAAGGGTTTTACATCAT+TGG | + | chr3_3:35653453-35653472 | Msa0450300:CDS | 40.0% |
! | TCATTATCCTGTTTCTCAGC+TGG | + | chr3_3:35653484-35653503 | Msa0450300:CDS | 40.0% |
AGCTTACACACAAGAGACTT+TGG | - | chr3_3:35653607-35653626 | None:intergenic | 40.0% | |
GGGTACAAAAAGCTTGGATT+TGG | + | chr3_3:35653663-35653682 | Msa0450300:intron | 40.0% | |
GATGCATGCTAAGTTGCTAT+TGG | + | chr3_3:35653812-35653831 | Msa0450300:intron | 40.0% | |
CAATGACAGCTAAATCCAGT+AGG | - | chr3_3:35653908-35653927 | None:intergenic | 40.0% | |
! | GGATTTAGCTGTCATTGACT+TGG | + | chr3_3:35653911-35653930 | Msa0450300:intron | 40.0% |
TAGGGGTTCCTTTATGACAT+CGG | - | chr3_3:35653945-35653964 | None:intergenic | 40.0% | |
ACGAGGTTAAAATAAGGGGA+AGG | - | chr3_3:35654107-35654126 | None:intergenic | 40.0% | |
TGACACAAGGAAGGGATTAA+CGG | - | chr3_3:35654172-35654191 | None:intergenic | 40.0% | |
TAATCCCTTCCTTGTGTCAA+AGG | + | chr3_3:35654173-35654192 | Msa0450300:CDS | 40.0% | |
TCATAACATGAAGCAAGGCT+GGG | - | chr3_3:35654200-35654219 | None:intergenic | 40.0% | |
GACACTCATAACATGAAGCA+AGG | - | chr3_3:35654205-35654224 | None:intergenic | 40.0% | |
TGCTTCATGTTATGAGTGTC+AGG | + | chr3_3:35654205-35654224 | Msa0450300:CDS | 40.0% | |
AGGTCTATCAACAATGGAGT+TGG | + | chr3_3:35654273-35654292 | Msa0450300:CDS | 40.0% | |
GGAAATGCAACACATCTAAG+CGG | - | chr3_3:35654425-35654444 | None:intergenic | 40.0% | |
!! | GTACCTTTGAATTGGGTTGA+TGG | + | chr3_3:35654653-35654672 | Msa0450300:intron | 40.0% |
TGTGAAAACCTAGAGCTAGA+AGG | - | chr3_3:35654731-35654750 | None:intergenic | 40.0% | |
GTTACTAAATGGACCGTGAT+GGG | - | chr3_3:35654852-35654871 | None:intergenic | 40.0% | |
TGTTACTAAATGGACCGTGA+TGG | - | chr3_3:35654853-35654872 | None:intergenic | 40.0% | |
TAATCCAACAATCTCCCACT+TGG | + | chr3_3:35654995-35655014 | Msa0450300:intron | 40.0% | |
CTGCAGAAATTGAATCCGAT+AGG | + | chr3_3:35655137-35655156 | Msa0450300:intron | 40.0% | |
TTAAATGCTTGGGCCATTCT+TGG | - | chr3_3:35655249-35655268 | None:intergenic | 40.0% | |
AAAAATCAGGTTACACGCAG+CGG | + | chr3_3:35656652-35656671 | Msa0450300:intron | 40.0% | |
AACTATCATTCTCCACCAAG+TGG | - | chr3_3:35656902-35656921 | None:intergenic | 40.0% | |
TCCGTCACTCACATAACAAA+GGG | + | chr3_3:35657139-35657158 | Msa0450300:intron | 40.0% | |
! | TCCCTTTGTTATGTGAGTGA+CGG | - | chr3_3:35657143-35657162 | None:intergenic | 40.0% |
AATCGAATCGGGTCAAATCA+CGG | - | chr3_3:35658546-35658565 | None:intergenic | 40.0% | |
! | TGATTTGACCCGATTCGATT+TGG | + | chr3_3:35658546-35658565 | Msa0450300:intron | 40.0% |
TTGATCGTGCCAAATCGAAT+CGG | - | chr3_3:35658558-35658577 | None:intergenic | 40.0% | |
!! | GTACCTTTGAATTGGGTTGA+TGG | + | chr3_3:35654653-35654672 | Msa0450300:intron | 40.0% |
GTTATCCCTCTCATAGTTGT+CGG | - | chr3_3:35659176-35659195 | None:intergenic | 40.0% | |
TGTGAAAACCTAGAGCTAGA+CGG | - | chr3_3:35654731-35654750 | None:intergenic | 40.0% | |
TTATTCGTCATCCCATCAGA+CGG | - | chr3_3:35654774-35654793 | None:intergenic | 40.0% | |
CTAAATTGTCCAACCCATCA+CGG | + | chr3_3:35659314-35659333 | Msa0450300:intron | 40.0% | |
GTTACTAAATGGACCGTGAT+GGG | - | chr3_3:35654852-35654871 | None:intergenic | 40.0% | |
TGTTACTAAATGGACCGTGA+TGG | - | chr3_3:35654853-35654872 | None:intergenic | 40.0% | |
CAAAAGGTAAATAGGACTGG+AGG | - | chr3_3:35659525-35659544 | None:intergenic | 40.0% | |
! | CTCCAGTCCTATTTACCTTT+TGG | + | chr3_3:35659523-35659542 | Msa0450300:intron | 40.0% |
CTCCTTTGAATATGCTTCCT+TGG | + | chr3_3:35659610-35659629 | Msa0450300:intron | 40.0% | |
!! | AAGGTTGATGCAGGGAATTA+TGG | + | chr3_3:35659796-35659815 | Msa0450300:intron | 40.0% |
CTTTCCATTATCCTCTGTCT+GGG | - | chr3_3:35659822-35659841 | None:intergenic | 40.0% | |
! | AGGCAATATGCATTGATAGG+TGG | - | chr3_3:35659849-35659868 | None:intergenic | 40.0% |
! | GCAAGGCAATATGCATTGAT+AGG | - | chr3_3:35659852-35659871 | None:intergenic | 40.0% |
CATCAGAGACACCAGATATA+GGG | - | chr3_3:35660012-35660031 | None:intergenic | 40.0% | |
ACATCAGAGACACCAGATAT+AGG | - | chr3_3:35660013-35660032 | None:intergenic | 40.0% | |
! | AAGACTTCACAGGCATTTTG+TGG | + | chr3_3:35660350-35660369 | Msa0450300:intron | 40.0% |
AAGGTGCAAATCTTGTCAGT+CGG | + | chr3_3:35661023-35661042 | Msa0450300:CDS | 40.0% | |
AAGCTTGCAAATTGTCCTTG+TGG | + | chr3_3:35661069-35661088 | Msa0450300:CDS | 40.0% | |
AGCTTGCAAATTGTCCTTGT+GGG | + | chr3_3:35661070-35661089 | Msa0450300:CDS | 40.0% | |
AACTCGGACTGAACAAATCA+AGG | + | chr3_3:35661097-35661116 | Msa0450300:CDS | 40.0% | |
TTGCTAACAGAGTAAGTCAC+TGG | + | chr3_3:35661124-35661143 | Msa0450300:CDS | 40.0% | |
TGCTAACAGAGTAAGTCACT+GGG | + | chr3_3:35661125-35661144 | Msa0450300:CDS | 40.0% | |
!!! | AGCTTTTGACTTGTTAGGCA+AGG | + | chr3_3:35661167-35661186 | Msa0450300:CDS | 40.0% |
!!! | GCTTTTGACTTGTTAGGCAA+GGG | + | chr3_3:35661168-35661187 | Msa0450300:CDS | 40.0% |
TTGTCACCTAAGTTTCTCTC+TGG | + | chr3_3:35661204-35661223 | Msa0450300:CDS | 40.0% | |
AGAAGATGACAACGATGCAG+GGG | - | chr3_3:35650571-35650590 | None:intergenic | 45.0% | |
GAGAAGATGACAACGATGCA+GGG | - | chr3_3:35650572-35650591 | None:intergenic | 45.0% | |
AGAGAAGATGACAACGATGC+AGG | - | chr3_3:35650573-35650592 | None:intergenic | 45.0% | |
TAATCCCGCGCGATAATCAA+AGG | + | chr3_3:35650637-35650656 | Msa0450300:five_prime_UTR | 45.0% | |
CTAACCTTTGATTATCGCGC+GGG | - | chr3_3:35650644-35650663 | None:intergenic | 45.0% | |
GCTAACCTTTGATTATCGCG+CGG | - | chr3_3:35650645-35650664 | None:intergenic | 45.0% | |
! | ACGTGAGGAAGTGTGATTGA+TGG | - | chr3_3:35650670-35650689 | None:intergenic | 45.0% |
! | CCCGTTCATGATTTGAAACC+TGG | - | chr3_3:35650734-35650753 | None:intergenic | 45.0% |
TCAAATCATGAACGGGTCTC+CGG | + | chr3_3:35650738-35650757 | Msa0450300:exon | 45.0% | |
AATGAATCCAACGGTGGATC+CGG | - | chr3_3:35650760-35650779 | None:intergenic | 45.0% | |
GTAACGTTCAGACTCCGATT+CGG | - | chr3_3:35650839-35650858 | None:intergenic | 45.0% | |
AGCGCAAGTAACTCCATGAT+GGG | + | chr3_3:35650862-35650881 | Msa0450300:CDS | 45.0% | |
GGTGATGAGCTTAGTATGAC+CGG | + | chr3_3:35651039-35651058 | Msa0450300:CDS | 45.0% | |
GTGATGAGCTTAGTATGACC+GGG | + | chr3_3:35651040-35651059 | Msa0450300:CDS | 45.0% | |
! | CTTGATTCGTCGGAGTTGAT+TGG | + | chr3_3:35651063-35651082 | Msa0450300:CDS | 45.0% |
GACGGAATTGAAGAATCTGC+TGG | + | chr3_3:35651090-35651109 | Msa0450300:CDS | 45.0% | |
TCTGCTGGGAATGAAAATGG+TGG | + | chr3_3:35651105-35651124 | Msa0450300:CDS | 45.0% | |
TTGGGGTAAGAGAGATTGAG+AGG | + | chr3_3:35651133-35651152 | Msa0450300:CDS | 45.0% | |
TGGGGTAAGAGAGATTGAGA+GGG | + | chr3_3:35651134-35651153 | Msa0450300:CDS | 45.0% | |
AAGAGAGATTGAGAGGGAAG+AGG | + | chr3_3:35651140-35651159 | Msa0450300:CDS | 45.0% | |
! | GAGGAAGAGGAATTTTCGGA+AGG | + | chr3_3:35651165-35651184 | Msa0450300:CDS | 45.0% |
AGATCAGACACACCAGAAAC+TGG | - | chr3_3:35651408-35651427 | None:intergenic | 45.0% | |
TCGAAAAGAAGAGAAGGACG+CGG | + | chr3_3:35651485-35651504 | Msa0450300:CDS | 45.0% | |
!! | TGATCGAGGAGCTTTAGAAG+AGG | + | chr3_3:35651548-35651567 | Msa0450300:CDS | 45.0% |
!! | AGGAGCTTTAGAAGAGGTGA+GGG | + | chr3_3:35651554-35651573 | Msa0450300:CDS | 45.0% |
! | CTTTAGAAGAGGTGAGGGAT+AGG | + | chr3_3:35651559-35651578 | Msa0450300:CDS | 45.0% |
CCTTGAACTTCACAGGAAAC+AGG | - | chr3_3:35651591-35651610 | None:intergenic | 45.0% | |
CCTGTTTCCTGTGAAGTTCA+AGG | + | chr3_3:35651588-35651607 | Msa0450300:CDS | 45.0% | |
TGCTGACAACTCGCTTGATT+CGG | + | chr3_3:35651611-35651630 | Msa0450300:CDS | 45.0% | |
! | CTCTTCTGAGGATCTTCTTC+TGG | - | chr3_3:35651645-35651664 | None:intergenic | 45.0% |
! | TTCCTTGTTTCGCCATTCGA+CGG | - | chr3_3:35651876-35651895 | None:intergenic | 45.0% |
TAGTGGCCATAGTTGCATGA+CGG | + | chr3_3:35652099-35652118 | Msa0450300:intron | 45.0% | |
CACTAACCGTCATGCAACTA+TGG | - | chr3_3:35652108-35652127 | None:intergenic | 45.0% | |
TAGTTGCATGACGGTTAGTG+TGG | + | chr3_3:35652108-35652127 | Msa0450300:intron | 45.0% | |
ACGGTTAGTGTGGTCTGATT+TGG | + | chr3_3:35652118-35652137 | Msa0450300:intron | 45.0% | |
CGGTTAGTGTGGTCTGATTT+GGG | + | chr3_3:35652119-35652138 | Msa0450300:intron | 45.0% | |
GTTTCAACACTAAGCCCAGT+TGG | - | chr3_3:35652286-35652305 | None:intergenic | 45.0% | |
CCCTCTCATGAAAAAGATGG+TGG | + | chr3_3:35652442-35652461 | Msa0450300:intron | 45.0% | |
TGACGAGGTTGTTCAGGAAA+TGG | + | chr3_3:35652579-35652598 | Msa0450300:CDS | 45.0% | |
AGCGCCCAAGAAGAATAGAT+AGG | + | chr3_3:35652749-35652768 | Msa0450300:CDS | 45.0% | |
TAGGTGCAAGGCAGAAAAGA+GGG | + | chr3_3:35652782-35652801 | Msa0450300:CDS | 45.0% | |
! | TGAAAGATTGGTTGGGGTGA+AGG | + | chr3_3:35652819-35652838 | Msa0450300:CDS | 45.0% |
! | AATAAAAGTGTGGAGCGGCA+AGG | + | chr3_3:35652858-35652877 | Msa0450300:CDS | 45.0% |
CCAGCCTTGCTCGTTAAATA+AGG | - | chr3_3:35652944-35652963 | None:intergenic | 45.0% | |
! | CCTTATTTAACGAGCAAGGC+TGG | + | chr3_3:35652941-35652960 | Msa0450300:CDS | 45.0% |
TCAACAGAAGACCAAGGCAA+AGG | - | chr3_3:35652973-35652992 | None:intergenic | 45.0% | |
TGGAGGACTTGAAAAGAACC+TGG | - | chr3_3:35653088-35653107 | None:intergenic | 45.0% | |
AACCAAACAAGTGCTCTTGG+AGG | - | chr3_3:35653105-35653124 | None:intergenic | 45.0% | |
AACTGGGATGGGAATCTTCA+GGG | - | chr3_3:35653133-35653152 | None:intergenic | 45.0% | |
GAGTTTGACACAGGTGAACT+GGG | - | chr3_3:35653149-35653168 | None:intergenic | 45.0% | |
AGAGTTTGACACAGGTGAAC+TGG | - | chr3_3:35653150-35653169 | None:intergenic | 45.0% | |
TTCGAAACTCTTCCACTTGG+GGG | + | chr3_3:35653207-35653226 | Msa0450300:CDS | 45.0% | |
! | TGATATGGTTTTCCCCCAAG+TGG | - | chr3_3:35653222-35653241 | None:intergenic | 45.0% |
TTGTACAGACATTTGGCTGG+GGG | + | chr3_3:35653357-35653376 | Msa0450300:CDS | 45.0% | |
TCAGCTGGCAAAGTCATATC+TGG | + | chr3_3:35653499-35653518 | Msa0450300:CDS | 45.0% | |
CTCATAACATGAAGCAAGGC+TGG | - | chr3_3:35654201-35654220 | None:intergenic | 45.0% | |
AAGAATGGGCAGCGAACATA+TGG | - | chr3_3:35654252-35654271 | None:intergenic | 45.0% | |
CTAACCAGCAAAGACTCCTT+TGG | - | chr3_3:35654361-35654380 | None:intergenic | 45.0% | |
CCTCCATCAACCCAATTCAA+AGG | - | chr3_3:35654659-35654678 | None:intergenic | 45.0% | |
!! | CCTTTGAATTGGGTTGATGG+AGG | + | chr3_3:35654656-35654675 | Msa0450300:intron | 45.0% |
GTCATCCCTCTCATAGTTGT+CGG | - | chr3_3:35654698-35654717 | None:intergenic | 45.0% | |
CCTAGAGCTAGAAGGAATGA+GGG | - | chr3_3:35654723-35654742 | None:intergenic | 45.0% | |
ACCTAGAGCTAGAAGGAATG+AGG | - | chr3_3:35654724-35654743 | None:intergenic | 45.0% | |
CTAAATGGTCCAACCCATCA+CGG | + | chr3_3:35654836-35654855 | Msa0450300:intron | 45.0% | |
TCATCCAAGTGGGAGATTGT+TGG | - | chr3_3:35655002-35655021 | None:intergenic | 45.0% | |
! | TGGTTAGTGGTTCTGCCAAT+GGG | + | chr3_3:35655357-35655376 | Msa0450300:intron | 45.0% |
!! | ACGTGATGGACATACCCTAT+CGG | - | chr3_3:35656971-35656990 | None:intergenic | 45.0% |
GTCCGTCACTCACATAACAA+AGG | + | chr3_3:35657138-35657157 | Msa0450300:intron | 45.0% | |
TGGTGACAGTCATACCCTAT+CGG | - | chr3_3:35657467-35657486 | None:intergenic | 45.0% | |
ATCGAATCGGGTCAAATCAC+GGG | - | chr3_3:35658545-35658564 | None:intergenic | 45.0% | |
TGATCGTGCCAAATCGAATC+GGG | - | chr3_3:35658557-35658576 | None:intergenic | 45.0% | |
CCTCCATCAACCCAATTCAA+AGG | - | chr3_3:35654659-35654678 | None:intergenic | 45.0% | |
!! | CCTTTGAATTGGGTTGATGG+AGG | + | chr3_3:35654656-35654675 | Msa0450300:intron | 45.0% |
ATAGTTGTCGGCGTTGTCTA+CGG | - | chr3_3:35654686-35654705 | None:intergenic | 45.0% | |
CCAATCAAAGCAGGGAATGT+TGG | - | chr3_3:35659480-35659499 | None:intergenic | 45.0% | |
CCAACATTCCCTGCTTTGAT+TGG | + | chr3_3:35659477-35659496 | Msa0450300:intron | 45.0% | |
AAAGGCAGCCAATCAAAGCA+GGG | - | chr3_3:35659488-35659507 | None:intergenic | 45.0% | |
TAAAGGCAGCCAATCAAAGC+AGG | - | chr3_3:35659489-35659508 | None:intergenic | 45.0% | |
CCTTTCCATTATCCTCTGTC+TGG | - | chr3_3:35659823-35659842 | None:intergenic | 45.0% | |
!! | CCAGACAGAGGATAATGGAA+AGG | + | chr3_3:35659820-35659839 | Msa0450300:intron | 45.0% |
AACTGTGTCGAGGAAAATCC+TGG | + | chr3_3:35660070-35660089 | Msa0450300:CDS | 45.0% | |
ATGCCTCATATGCTGTGATG+TGG | + | chr3_3:35660109-35660128 | Msa0450300:CDS | 45.0% | |
TGCCTCATATGCTGTGATGT+GGG | + | chr3_3:35660110-35660129 | Msa0450300:CDS | 45.0% | |
TTCCCACATCACAGCATATG+AGG | - | chr3_3:35660115-35660134 | None:intergenic | 45.0% | |
AATCTTGTCGGGCACTACAT+GGG | - | chr3_3:35660139-35660158 | None:intergenic | 45.0% | |
ATGGGTCACTGCAATCTTGT+CGG | - | chr3_3:35660151-35660170 | None:intergenic | 45.0% | |
CAATTGACATGTTGCCAGGT+TGG | - | chr3_3:35660828-35660847 | None:intergenic | 45.0% | |
!! | TGTGGAGGCATTAGAGGATA+GGG | - | chr3_3:35660906-35660925 | None:intergenic | 45.0% |
!! | ATGTGGAGGCATTAGAGGAT+AGG | - | chr3_3:35660907-35660926 | None:intergenic | 45.0% |
AACAGGAAGGCGACATTGAA+AGG | + | chr3_3:35661004-35661023 | Msa0450300:intron | 45.0% | |
GCTTGCAAATTGTCCTTGTG+GGG | + | chr3_3:35661071-35661090 | Msa0450300:CDS | 45.0% | |
GCTAACAGAGTAAGTCACTG+GGG | + | chr3_3:35661126-35661145 | Msa0450300:CDS | 45.0% | |
!!! | TTAAAAAAAAATTGAAATTT+TGG | + | chr3_3:35652362-35652381 | Msa0450300:intron | 5.0% |
!! | TAATCTTATAATATAAATTA+TGG | - | chr3_3:35654926-35654945 | None:intergenic | 5.0% |
!!! | TTATTATATTTTGATTATTT+TGG | - | chr3_3:35658405-35658424 | None:intergenic | 5.0% |
!! | TACTAATAATTATTATTATT+TGG | + | chr3_3:35658425-35658444 | Msa0450300:intron | 5.0% |
!! | AAATTAAAATTAATTGATAT+AGG | - | chr3_3:35658816-35658835 | None:intergenic | 5.0% |
!! | TAATCTTATAATATAAATAA+TGG | - | chr3_3:35659404-35659423 | None:intergenic | 5.0% |
!! | ATTATTTAATTAATCAATTA+TGG | - | chr3_3:35654975-35654994 | None:intergenic | 5.0% |
CACCGTTGGATTCATTTCCC+CGG | + | chr3_3:35650764-35650783 | Msa0450300:CDS | 50.0% | |
AGCCGGGGAAATGAATCCAA+CGG | - | chr3_3:35650769-35650788 | None:intergenic | 50.0% | |
CAGCGCAAGTAACTCCATGA+TGG | + | chr3_3:35650861-35650880 | Msa0450300:CDS | 50.0% | |
TCGATACGGTTCGAGTGGAT+TGG | + | chr3_3:35650999-35651018 | Msa0450300:CDS | 50.0% | |
! | TATGACCGGGCTTGATTCGT+CGG | + | chr3_3:35651053-35651072 | Msa0450300:CDS | 50.0% |
GATTGAGAGGGAAGAGGATG+AGG | + | chr3_3:35651146-35651165 | Msa0450300:CDS | 50.0% | |
!! | GAGGAGCTTTAGAAGAGGTG+AGG | + | chr3_3:35651553-35651572 | Msa0450300:CDS | 50.0% |
GTCAGCACCTTGAACTTCAC+AGG | - | chr3_3:35651598-35651617 | None:intergenic | 50.0% | |
GCTGACAACTCGCTTGATTC+GGG | + | chr3_3:35651612-35651631 | Msa0450300:CDS | 50.0% | |
!! | TATCACGGATGGTGGAAGTG+AGG | + | chr3_3:35651671-35651690 | Msa0450300:CDS | 50.0% |
GGAGTCTATGGATTCTCCTG+CGG | + | chr3_3:35652615-35652634 | Msa0450300:CDS | 50.0% | |
! | CTTGAAGGCATGGACTGTTG+TGG | - | chr3_3:35652673-35652692 | None:intergenic | 50.0% |
CAGTCCATGCCTTCAAGAGA+TGG | + | chr3_3:35652676-35652695 | Msa0450300:CDS | 50.0% | |
TCCATGCCTTCAAGAGATGG+TGG | + | chr3_3:35652679-35652698 | Msa0450300:CDS | 50.0% | |
CCATGCCTTCAAGAGATGGT+GGG | + | chr3_3:35652680-35652699 | Msa0450300:CDS | 50.0% | |
GTCAACCCACCATCTCTTGA+AGG | - | chr3_3:35652688-35652707 | None:intergenic | 50.0% | |
GGATTGAAGTGGTAGGTGCA+AGG | + | chr3_3:35652770-35652789 | Msa0450300:CDS | 50.0% | |
GTAGGTGCAAGGCAGAAAAG+AGG | + | chr3_3:35652781-35652800 | Msa0450300:CDS | 50.0% | |
AGGTGCAAGGCAGAAAAGAG+GGG | + | chr3_3:35652783-35652802 | Msa0450300:CDS | 50.0% | |
GCTGGACTTTACCTTTGCCT+TGG | + | chr3_3:35652959-35652978 | Msa0450300:CDS | 50.0% | |
!! | GTCCTCCAAGAGCACTTGTT+TGG | + | chr3_3:35653100-35653119 | Msa0450300:intron | 50.0% |
ACTGGGATGGGAATCTTCAG+GGG | - | chr3_3:35653132-35653151 | None:intergenic | 50.0% | |
GAACTGGGATGGGAATCTTC+AGG | - | chr3_3:35653134-35653153 | None:intergenic | 50.0% | |
TGACACAGGTGAACTGGGAT+GGG | - | chr3_3:35653144-35653163 | None:intergenic | 50.0% | |
TTGACACAGGTGAACTGGGA+TGG | - | chr3_3:35653145-35653164 | None:intergenic | 50.0% | |
GACACTGGAGAGTTTGACAC+AGG | - | chr3_3:35653158-35653177 | None:intergenic | 50.0% | |
GCACAACATCACACATGTGC+TGG | + | chr3_3:35653290-35653309 | Msa0450300:CDS | 50.0% | |
ACACATGTGCTGGATGCCAT+AGG | + | chr3_3:35653300-35653319 | Msa0450300:CDS | 50.0% | |
AAACTGCAGTCTTGCCAGCA+AGG | + | chr3_3:35653438-35653457 | Msa0450300:CDS | 50.0% | |
AACTGCAGTCTTGCCAGCAA+GGG | + | chr3_3:35653439-35653458 | Msa0450300:CDS | 50.0% | |
GACTTTGCCAGCTGAGAAAC+AGG | - | chr3_3:35653494-35653513 | None:intergenic | 50.0% | |
ACGGCAGTGACACAAAGCAT+GGG | - | chr3_3:35654153-35654172 | None:intergenic | 50.0% | |
AACGGCAGTGACACAAAGCA+TGG | - | chr3_3:35654154-35654173 | None:intergenic | 50.0% | |
GGGACCTTTGACACAAGGAA+GGG | - | chr3_3:35654180-35654199 | None:intergenic | 50.0% | |
TGGGACCTTTGACACAAGGA+AGG | - | chr3_3:35654181-35654200 | None:intergenic | 50.0% | |
ATGTTCGCTGCCCATTCTTG+AGG | + | chr3_3:35654253-35654272 | Msa0450300:CDS | 50.0% | |
CTGTCCAAAGGAGTCTTTGC+TGG | + | chr3_3:35654354-35654373 | Msa0450300:CDS | 50.0% | |
ACAACGCCGACAACTATGAG+AGG | + | chr3_3:35654689-35654708 | Msa0450300:intron | 50.0% | |
CAACGCCGACAACTATGAGA+GGG | + | chr3_3:35654690-35654709 | Msa0450300:intron | 50.0% | |
!! | CCCTCATTCCTTCTAGCTCT+AGG | + | chr3_3:35654720-35654739 | Msa0450300:intron | 50.0% |
!! | CTAAATGGACCGTGATGGGT+TGG | - | chr3_3:35654848-35654867 | None:intergenic | 50.0% |
! | GTGGTTAGTGGTTCTGCCAA+TGG | + | chr3_3:35655356-35655375 | Msa0450300:intron | 50.0% |
GATGAATGTCACACTCTGCG+AGG | - | chr3_3:35658044-35658063 | None:intergenic | 50.0% | |
ACAACGCCGACAACTATGAG+AGG | + | chr3_3:35654689-35654708 | Msa0450300:intron | 50.0% | |
CAACGCCGACAACTATGAGA+GGG | + | chr3_3:35654690-35654709 | Msa0450300:intron | 50.0% | |
CCTAGAGCTAGACGGAATGA+GGG | - | chr3_3:35659201-35659220 | None:intergenic | 50.0% | |
ACCTAGAGCTAGACGGAATG+AGG | - | chr3_3:35659202-35659221 | None:intergenic | 50.0% | |
!! | CTAAATGGACCGTGATGGGT+TGG | - | chr3_3:35654848-35654867 | None:intergenic | 50.0% |
ATGGCCCAGACAGAGGATAA+TGG | + | chr3_3:35659815-35659834 | Msa0450300:intron | 50.0% | |
TTATGCAGCACTGCCTGTGA+TGG | + | chr3_3:35660043-35660062 | Msa0450300:intron | 50.0% | |
GACACAGTTTCGACCATCAC+AGG | - | chr3_3:35660059-35660078 | None:intergenic | 50.0% | |
TGATGGTCGAAACTGTGTCG+AGG | + | chr3_3:35660060-35660079 | Msa0450300:CDS | 50.0% | |
CAATCTTGTCGGGCACTACA+TGG | - | chr3_3:35660140-35660159 | None:intergenic | 50.0% | |
TGGGTCACTGCAATCTTGTC+GGG | - | chr3_3:35660150-35660169 | None:intergenic | 50.0% | |
TGTCCTTGTGGGGAACAACT+CGG | + | chr3_3:35661081-35661100 | Msa0450300:CDS | 50.0% | |
AACAGAGTAAGTCACTGGGG+AGG | + | chr3_3:35661129-35661148 | Msa0450300:CDS | 50.0% | |
TTAGGCAAGGGACTGAGTTC+TGG | + | chr3_3:35661180-35661199 | Msa0450300:CDS | 50.0% | |
TAGGCAAGGGACTGAGTTCT+GGG | + | chr3_3:35661181-35661200 | Msa0450300:CDS | 50.0% | |
!!! | TGACGCTCCCTTGTTTTCTC+AGG | - | chr3_3:35661249-35661268 | None:intergenic | 50.0% |
!! | GAGAAAACAAGGGAGCGTCA+AGG | + | chr3_3:35661249-35661268 | Msa0450300:CDS | 50.0% |
CGGGGAAATGAATCCAACGG+TGG | - | chr3_3:35650766-35650785 | None:intergenic | 55.0% | |
! | GGAAAACGGTAACGGCACTG+CGG | - | chr3_3:35650912-35650931 | None:intergenic | 55.0% |
CAACTCCGACGAATCAAGCC+CGG | - | chr3_3:35651061-35651080 | None:intergenic | 55.0% | |
GAGGGAAGAGGATGAGGAAG+AGG | + | chr3_3:35651152-35651171 | Msa0450300:CDS | 55.0% | |
!! | GATGGTGGAAGTGAGGCAGA+GGG | + | chr3_3:35651678-35651697 | Msa0450300:CDS | 55.0% |
CCATTCGACGGCAGTACGAT+TGG | - | chr3_3:35651864-35651883 | None:intergenic | 55.0% | |
CCAATCGTACTGCCGTCGAA+TGG | + | chr3_3:35651861-35651880 | Msa0450300:CDS | 55.0% | |
TGCCGTCGAATGGCGAAACA+AGG | + | chr3_3:35651871-35651890 | Msa0450300:CDS | 55.0% | |
CTATGGATTCTCCTGCGGCT+AGG | + | chr3_3:35652620-35652639 | Msa0450300:CDS | 55.0% | |
CCCACCATCTCTTGAAGGCA+TGG | - | chr3_3:35652683-35652702 | None:intergenic | 55.0% | |
! | TGACACAAAGCATGGGCTGC+AGG | - | chr3_3:35654146-35654165 | None:intergenic | 55.0% |
AGGCTGGGACCTTTGACACA+AGG | - | chr3_3:35654185-35654204 | None:intergenic | 55.0% | |
ATAGCTAAACGGCTGAGGGC+AGG | + | chr3_3:35654794-35654813 | Msa0450300:intron | 55.0% | |
TAGCTAAACGGCTGAGGGCA+GGG | + | chr3_3:35654795-35654814 | Msa0450300:intron | 55.0% | |
GCGCGCATGTTATCACGTGT+TGG | + | chr3_3:35658479-35658498 | Msa0450300:intron | 55.0% | |
CGTGTTGGATCTTCTTCGCC+CGG | + | chr3_3:35658494-35658513 | Msa0450300:intron | 55.0% | |
TTGGATCTTCTTCGCCCGGT+TGG | + | chr3_3:35658498-35658517 | Msa0450300:intron | 55.0% | |
TGGATCTTCTTCGCCCGGTT+GGG | + | chr3_3:35658499-35658518 | Msa0450300:intron | 55.0% | |
!! | CCCTCATTCCGTCTAGCTCT+AGG | + | chr3_3:35659198-35659217 | Msa0450300:intron | 55.0% |
ATAGCTAAACGGCTGAGGGC+AGG | + | chr3_3:35654794-35654813 | Msa0450300:intron | 55.0% | |
TAGCTAAACGGCTGAGGGCA+GGG | + | chr3_3:35654795-35654814 | Msa0450300:intron | 55.0% | |
GGGAATTATGGCCCAGACAG+AGG | + | chr3_3:35659808-35659827 | Msa0450300:intron | 55.0% | |
AGTCCGAGTTGTTCCCCACA+AGG | - | chr3_3:35661087-35661106 | None:intergenic | 55.0% | |
AGAGTAAGTCACTGGGGAGG+TGG | + | chr3_3:35661132-35661151 | Msa0450300:CDS | 55.0% | |
CTACGTCTCCGCCAATCGGA+CGG | + | chr3_3:35650787-35650806 | Msa0450300:CDS | 60.0% | |
GAGAGAGACCGTCCGATTGG+CGG | - | chr3_3:35650798-35650817 | None:intergenic | 60.0% | |
CTCTCTCGCCGCTCTTCCTT+CGG | + | chr3_3:35650811-35650830 | Msa0450300:CDS | 60.0% | |
! | ATTCGGCGCCGAAGGAAGAG+CGG | - | chr3_3:35650822-35650841 | None:intergenic | 60.0% |
! | CTCTTCCTTCGGCGCCGAAT+CGG | + | chr3_3:35650822-35650841 | Msa0450300:CDS | 60.0% |
!! | GGTGCTCGGTGTTCCCATCA+TGG | - | chr3_3:35650878-35650897 | None:intergenic | 60.0% |
CGGATGCTCATGCTGGTGCT+CGG | - | chr3_3:35650892-35650911 | None:intergenic | 60.0% | |
!! | GGATGGTGGAAGTGAGGCAG+AGG | + | chr3_3:35651677-35651696 | Msa0450300:CDS | 60.0% |
TGTGGAGCGGCAAGGATCAG+TGG | + | chr3_3:35652866-35652885 | Msa0450300:CDS | 60.0% | |
GTGGAGCGGCAAGGATCAGT+GGG | + | chr3_3:35652867-35652886 | Msa0450300:CDS | 60.0% | |
TGAGGGCAGGGACCTCTCAT+TGG | + | chr3_3:35654807-35654826 | Msa0450300:intron | 60.0% | |
GAGGGCAGGGACCTCTCATT+GGG | + | chr3_3:35654808-35654827 | Msa0450300:intron | 60.0% | |
GACCCAGAATCAGCCCAACC+GGG | - | chr3_3:35658515-35658534 | None:intergenic | 60.0% | |
CGACCCAGAATCAGCCCAAC+CGG | - | chr3_3:35658516-35658535 | None:intergenic | 60.0% | |
TGAGGGCAGGGACCTCTCAT+TGG | + | chr3_3:35654807-35654826 | Msa0450300:intron | 60.0% | |
GAGGGCAGGGACCTCTCATT+GGG | + | chr3_3:35654808-35654827 | Msa0450300:intron | 60.0% | |
GTAAGTCACTGGGGAGGTGG+TGG | + | chr3_3:35661135-35661154 | Msa0450300:CDS | 60.0% | |
!! | TGGGGAGGTGGTGGAACGAA+AGG | + | chr3_3:35661144-35661163 | Msa0450300:CDS | 60.0% |
GATTGGCGGAGACGTAGCCG+GGG | - | chr3_3:35650784-35650803 | None:intergenic | 65.0% | |
CGATTGGCGGAGACGTAGCC+GGG | - | chr3_3:35650785-35650804 | None:intergenic | 65.0% | |
CCGATTGGCGGAGACGTAGC+CGG | - | chr3_3:35650786-35650805 | None:intergenic | 65.0% | |
CCGGCTACGTCTCCGCCAAT+CGG | + | chr3_3:35650783-35650802 | Msa0450300:CDS | 65.0% | |
GGCGAGAGAGACCGTCCGAT+TGG | - | chr3_3:35650801-35650820 | None:intergenic | 65.0% | |
!! | AGACTCCGATTCGGCGCCGA+AGG | - | chr3_3:35650830-35650849 | None:intergenic | 65.0% |
GGCACTGCGGATGCTCATGC+TGG | - | chr3_3:35650899-35650918 | None:intergenic | 65.0% | |
TCCTGCGGCTAGGTCTTCCG+TGG | + | chr3_3:35652630-35652649 | Msa0450300:CDS | 65.0% | |
CCTGCGGCTAGGTCTTCCGT+GGG | + | chr3_3:35652631-35652650 | Msa0450300:CDS | 65.0% | |
GAGCGGCAAGGATCAGTGGG+AGG | + | chr3_3:35652870-35652889 | Msa0450300:CDS | 65.0% | |
! | TCGCCCGGTTGGGCTGATTC+TGG | + | chr3_3:35658509-35658528 | Msa0450300:intron | 65.0% |
! | CGCCCGGTTGGGCTGATTCT+GGG | + | chr3_3:35658510-35658529 | Msa0450300:intron | 65.0% |
CGGGTCTCCGGATCCACCGT+TGG | + | chr3_3:35650750-35650769 | Msa0450300:CDS | 70.0% | |
CCCACGGAAGACCTAGCCGC+AGG | - | chr3_3:35652634-35652653 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_3 | gene | 35650559 | 35661488 | 35650559 | ID=Msa0450300;Name=Msa0450300 |
chr3_3 | mRNA | 35650559 | 35661488 | 35650559 | ID=Msa0450300-mRNA-1;Parent=Msa0450300;Name=Msa0450300-mRNA-1;_AED=0.11;_eAED=0.11;_QI=110|0.83|0.71|1|0.83|0.71|7|171|938 |
chr3_3 | exon | 35650559 | 35650658 | 35650559 | ID=Msa0450300-mRNA-1:exon:6398;Parent=Msa0450300-mRNA-1 |
chr3_3 | exon | 35650735 | 35651956 | 35650735 | ID=Msa0450300-mRNA-1:exon:6399;Parent=Msa0450300-mRNA-1 |
chr3_3 | exon | 35652550 | 35653088 | 35652550 | ID=Msa0450300-mRNA-1:exon:6400;Parent=Msa0450300-mRNA-1 |
chr3_3 | exon | 35653151 | 35653538 | 35653151 | ID=Msa0450300-mRNA-1:exon:6401;Parent=Msa0450300-mRNA-1 |
chr3_3 | exon | 35654150 | 35654375 | 35654150 | ID=Msa0450300-mRNA-1:exon:6402;Parent=Msa0450300-mRNA-1 |
chr3_3 | exon | 35660051 | 35660193 | 35660051 | ID=Msa0450300-mRNA-1:exon:6403;Parent=Msa0450300-mRNA-1 |
chr3_3 | exon | 35661009 | 35661488 | 35661009 | ID=Msa0450300-mRNA-1:exon:6404;Parent=Msa0450300-mRNA-1 |
chr3_3 | five_prime_UTR | 35650559 | 35650658 | 35650559 | ID=Msa0450300-mRNA-1:five_prime_utr;Parent=Msa0450300-mRNA-1 |
chr3_3 | five_prime_UTR | 35650735 | 35650744 | 35650735 | ID=Msa0450300-mRNA-1:five_prime_utr;Parent=Msa0450300-mRNA-1 |
chr3_3 | CDS | 35650745 | 35651956 | 35650745 | ID=Msa0450300-mRNA-1:cds;Parent=Msa0450300-mRNA-1 |
chr3_3 | CDS | 35652550 | 35653088 | 35652550 | ID=Msa0450300-mRNA-1:cds;Parent=Msa0450300-mRNA-1 |
chr3_3 | CDS | 35653151 | 35653538 | 35653151 | ID=Msa0450300-mRNA-1:cds;Parent=Msa0450300-mRNA-1 |
chr3_3 | CDS | 35654150 | 35654375 | 35654150 | ID=Msa0450300-mRNA-1:cds;Parent=Msa0450300-mRNA-1 |
chr3_3 | CDS | 35660051 | 35660193 | 35660051 | ID=Msa0450300-mRNA-1:cds;Parent=Msa0450300-mRNA-1 |
chr3_3 | CDS | 35661009 | 35661317 | 35661009 | ID=Msa0450300-mRNA-1:cds;Parent=Msa0450300-mRNA-1 |
chr3_3 | three_prime_UTR | 35661318 | 35661488 | 35661318 | ID=Msa0450300-mRNA-1:three_prime_utr;Parent=Msa0450300-mRNA-1 |
Gene Sequence |
Protein sequence |