AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0122530

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0122530 MtrunA17_Chr1g0182571 98.753 481 6 0 1 481 1 481 0.0 979
Msa0122530 MtrunA17_Chr7g0262921 65.208 457 101 10 1 444 1 412 0.0 558
Msa0122530 MtrunA17_Chr8g0366741 48.039 102 53 0 7 108 13 114 1.01e-27 114
Msa0122530 MtrunA17_Chr8g0366731 44.762 105 58 0 7 111 13 117 2.75e-27 113
Msa0122530 MtrunA17_Chr2g0292461 48.864 88 43 2 5 91 19 105 3.24e-21 94.4
Msa0122530 MtrunA17_Chr2g0318391 48.101 79 41 0 5 83 17 95 2.13e-20 94.0
Msa0122530 MtrunA17_Chr8g0360731 48.101 79 41 0 5 83 17 95 7.08e-20 92.0
Msa0122530 MtrunA17_Chr6g0481511 51.351 74 36 0 4 77 33 106 2.51e-19 87.8
Msa0122530 MtrunA17_Chr3g0083541 48.052 77 39 1 6 81 53 129 2.33e-17 84.0
Msa0122530 MtrunA17_Chr8g0352731 50.000 70 34 1 13 81 3 72 3.02e-17 80.1
Msa0122530 MtrunA17_Chr8g0380371 51.786 56 27 0 1 56 6 61 8.35e-16 72.0
Msa0122530 MtrunA17_Chr4g0037651 46.053 76 39 1 10 83 485 560 3.21e-15 78.6
Msa0122530 MtrunA17_Chr8g0385781 48.571 70 34 1 10 77 500 569 1.64e-14 76.3
Msa0122530 MtrunA17_Chr7g0221441 47.143 70 35 1 10 77 508 577 9.63e-14 73.9
Msa0122530 MtrunA17_Chr3g0131671 44.286 70 37 1 10 77 503 572 4.12e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0122530 AT2G37550.2 61.585 492 142 8 1 481 1 456 0.0 553
Msa0122530 AT2G37550.1 61.585 492 142 8 1 481 1 456 0.0 553
Msa0122530 AT3G53710.1 61.847 498 134 13 1 481 1 459 0.0 542
Msa0122530 AT3G53710.3 61.847 498 134 13 1 481 1 459 0.0 542
Msa0122530 AT3G53710.2 61.847 498 134 13 1 481 1 459 0.0 542
Msa0122530 AT4G17890.2 48.571 105 54 0 7 111 16 120 1.42e-29 119
Msa0122530 AT4G17890.1 48.571 105 54 0 7 111 16 120 2.30e-29 119
Msa0122530 AT5G46750.1 48.571 105 54 0 7 111 13 117 6.86e-29 118
Msa0122530 AT2G35210.1 46.667 105 56 0 7 111 13 117 1.10e-27 114
Msa0122530 AT2G35210.2 46.667 105 56 0 7 111 13 117 2.78e-27 113
Msa0122530 AT4G05330.3 48.810 84 42 1 5 87 16 99 4.04e-22 97.8
Msa0122530 AT4G05330.1 48.810 84 42 1 5 87 16 99 4.04e-22 97.8
Msa0122530 AT5G54310.1 41.803 122 68 2 7 128 19 137 1.24e-21 97.8
Msa0122530 AT3G17660.4 52.703 74 35 0 4 77 16 89 2.68e-21 91.7
Msa0122530 AT3G17660.1 52.703 74 35 0 4 77 16 89 3.28e-21 92.8
Msa0122530 AT4G21160.2 47.727 88 44 2 5 91 16 102 4.08e-21 94.7
Msa0122530 AT4G21160.3 47.727 88 44 2 5 91 16 102 4.08e-21 94.7
Msa0122530 AT4G21160.1 47.727 88 44 2 5 91 16 102 4.08e-21 94.7
Msa0122530 AT4G21160.4 47.727 88 44 2 5 91 16 102 4.08e-21 94.7
Msa0122530 AT3G17660.2 52.703 74 35 0 4 77 16 89 8.81e-21 92.0
Msa0122530 AT3G07940.2 50.649 77 37 1 6 81 49 125 9.26e-20 89.4
Msa0122530 AT3G07940.1 50.649 77 37 1 6 81 49 125 3.34e-19 89.7
Msa0122530 AT1G60860.2 54.386 57 26 0 7 63 359 415 2.59e-15 79.0
Msa0122530 AT1G60860.1 54.386 57 26 0 7 63 470 526 2.64e-15 79.3
Msa0122530 AT1G60860.3 54.386 57 26 0 7 63 299 355 3.04e-15 79.0
Msa0122530 AT3G17660.3 50.000 58 29 0 4 61 16 73 3.68e-14 72.0
Msa0122530 AT5G13300.1 48.571 70 34 1 10 77 507 576 3.99e-14 75.5
Msa0122530 AT5G61980.1 45.714 70 36 1 15 82 509 578 1.11e-13 74.3
Msa0122530 AT1G10870.1 50.000 54 27 0 10 63 473 526 3.05e-13 72.8
Msa0122530 AT1G10870.2 50.000 54 27 0 10 63 473 526 3.28e-13 72.8

Find 199 sgRNAs with CRISPR-Local

Find 337 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTCTGAAGAATTAAGATT+TGG 0.281660 1_3:+49255668 None:intergenic
CTTCTTAATTTAACTTTGTA+TGG 0.293258 1_3:-49255580 Msa0122530:three_prime_UTR
TGGGATAGGGAAGGAGGTTC+GGG 0.309762 1_3:-49258651 Msa0122530:CDS
AAGAAAGCTGCTGGACATAA+TGG 0.311171 1_3:-49256653 Msa0122530:CDS
CACAAAAGAGATTACTTCTA+AGG 0.329121 1_3:-49258083 Msa0122530:intron
CTCAAACTCTTGGGACGATT+GGG 0.331416 1_3:-49256909 Msa0122530:CDS
TATTTATACGCGGTCGCAAT+TGG 0.334644 1_3:-49258544 Msa0122530:CDS
TGGCGGCATCACGGCGGCTC+CGG 0.342322 1_3:-49259103 Msa0122530:CDS
TTGGGATAGGGAAGGAGGTT+CGG 0.345457 1_3:-49258652 Msa0122530:CDS
ATCCCAGCTCTTGGGATGAT+TGG 0.345579 1_3:-49256805 Msa0122530:CDS
ATGATGCTGGTTGGGCTGGC+TGG 0.346920 1_3:-49256727 Msa0122530:CDS
ATCGGAGGATGAAGTGTAGA+AGG 0.360348 1_3:+49259132 None:intergenic
GCAGATCTTGTTGCCGGGTT+GGG 0.371767 1_3:+49259070 None:intergenic
CAAATTCGACTACTAATAAC+TGG 0.372531 1_3:-49257048 Msa0122530:CDS
CCGGTTGTGAAGGAGAATTT+AGG 0.374910 1_3:-49258735 Msa0122530:CDS
GGAGTTGATCCTTTATTAGT+AGG 0.375169 1_3:+49256860 None:intergenic
ATGATTCCGGCTGGGATGAT+TGG 0.384077 1_3:-49258671 Msa0122530:CDS
TATTCATCTGGTGGGCAGTC+TGG 0.394756 1_3:-49256836 Msa0122530:CDS
AGTTTATCGTGATCGGATTC+AGG 0.397292 1_3:-49258790 Msa0122530:CDS
TGTGAGGAGTTTGGAGAAAG+TGG 0.397330 1_3:+49259187 None:intergenic
CTTCCTTCCTAGAATCTTTG+TGG 0.398078 1_3:+49256780 None:intergenic
AAGGGAGAACCTACTAATAA+AGG 0.401153 1_3:-49256869 Msa0122530:CDS
TGGGTGAGGTGTGAGGAGTT+TGG 0.401930 1_3:+49259178 None:intergenic
GACTGCCCACCAGATGAATA+AGG 0.405430 1_3:+49256839 None:intergenic
GCTCTGAAGAATTAAGATTT+GGG 0.409035 1_3:+49255669 None:intergenic
TGATAGAAATGGCTACTATC+AGG 0.410799 1_3:-49257011 Msa0122530:CDS
CGCAGATCTTGTTGCCGGGT+TGG 0.414757 1_3:+49259069 None:intergenic
TGTTGCCGGGTTGGGATTGA+AGG 0.414970 1_3:+49259078 None:intergenic
GCTCAAACTCTTGGGACGAT+TGG 0.416102 1_3:-49256910 Msa0122530:CDS
ATTGGGACCACAAAGATTCT+AGG 0.416709 1_3:-49256787 Msa0122530:CDS
CCACAATAATGATGCTGGTT+GGG 0.420450 1_3:-49256735 Msa0122530:CDS
TCCCAGCTCTTGGGATGATT+GGG 0.422693 1_3:-49256804 Msa0122530:CDS
GGCGGCATCACGGCGGCTCC+GGG 0.423745 1_3:-49259102 Msa0122530:CDS
CGCCGATGGGGCAGAGTCGC+CGG 0.424686 1_3:-49258698 Msa0122530:CDS
CGAAATGAGAATGATAGAAA+TGG 0.430727 1_3:-49257022 Msa0122530:CDS
AAACTCAAAGCTCAAACTCT+TGG 0.431090 1_3:-49256919 Msa0122530:CDS
AATAATGATGCTGGTTGGGC+TGG 0.431540 1_3:-49256731 Msa0122530:CDS
TCGGTCGTGGCGTGATCCTC+CGG 0.431712 1_3:-49258754 Msa0122530:CDS
TTCCTTCGGAATAGAATACT+TGG 0.434318 1_3:+49258851 None:intergenic
TGATTCCGGCTGGGATGATT+GGG 0.435890 1_3:-49258670 Msa0122530:CDS
TACTATCAGGATTTCAATCA+AGG 0.437121 1_3:-49256998 Msa0122530:CDS
CGCAAGGTGGGAAGTATGTT+GGG 0.437210 1_3:-49258440 Msa0122530:CDS
TACTCACAATCCCAGCTCTT+GGG 0.438114 1_3:-49256813 Msa0122530:CDS
GGATCAACTCCTTATTCATC+TGG 0.439382 1_3:-49256848 Msa0122530:CDS
GGAAGAGAACAATCTTCATC+AGG 0.440220 1_3:-49256950 Msa0122530:CDS
AAATCAGATGACGCTTGGAC+AGG 0.441545 1_3:-49256629 Msa0122530:CDS
GGGGATTGGTAAGTTGTCAT+TGG 0.442974 1_3:-49258140 Msa0122530:CDS
ATTTACAAGTGTTGAAAGAA+AGG 0.443584 1_3:-49255700 Msa0122530:three_prime_UTR
AGAAAGCTGCTGGACATAAT+GGG 0.444118 1_3:-49256652 Msa0122530:CDS
CCTAAATTCTCCTTCACAAC+CGG 0.446662 1_3:+49258735 None:intergenic
TCCGGAAAACACCGTGGTCT+CGG 0.447372 1_3:-49258978 Msa0122530:CDS
AACTCAAAGCTCAAACTCTT+GGG 0.448408 1_3:-49256918 Msa0122530:CDS
TGGGGAGCTGATGCTTTAGC+TGG 0.452701 1_3:+49256755 None:intergenic
CATGGCTTTGGCTTCACAGA+AGG 0.454790 1_3:-49257095 Msa0122530:CDS
TGCGACGGTGGAAGTCCTTC+CGG 0.458253 1_3:+49258459 None:intergenic
AAGGAGAATTTAGGTTCAAA+GGG 0.460070 1_3:-49258726 Msa0122530:CDS
ATCGACGCAGATCTTGTTGC+CGG 0.461374 1_3:+49259064 None:intergenic
AAAGGAGGTAATTCTTCTAC+TGG 0.461732 1_3:-49256971 Msa0122530:CDS
CGGATTCAGGCTTTGTCGGA+AGG 0.463866 1_3:-49258777 Msa0122530:CDS
GTCCCAATCATCCCAAGAGC+TGG 0.464845 1_3:+49256802 None:intergenic
TGATCGGATTCAGGCTTTGT+CGG 0.466457 1_3:-49258781 Msa0122530:CDS
GTAACAATATCCGTTTCCTT+CGG 0.466590 1_3:+49258837 None:intergenic
TTCAAAGGGAAGGCCGCCGA+TGG 0.468886 1_3:-49258712 Msa0122530:CDS
GTGTAGAAGGATGGAAATGA+GGG 0.470207 1_3:+49259145 None:intergenic
AATCAGATGACGCTTGGACA+GGG 0.470359 1_3:-49256628 Msa0122530:CDS
CAGTCTCGAGATTGTTCCAT+TGG 0.470757 1_3:-49255962 Msa0122530:three_prime_UTR
TGATGCTGGTTGGGCTGGCT+GGG 0.473809 1_3:-49256726 Msa0122530:CDS
GTACTCACAATCCCAGCTCT+TGG 0.474135 1_3:-49256814 Msa0122530:CDS
CTGCTTCAGTTTATCGTGAT+CGG 0.474442 1_3:-49258797 Msa0122530:CDS
GAAGGAGAATTTAGGTTCAA+AGG 0.482185 1_3:-49258727 Msa0122530:CDS
AGCTTCTGCGGCGGGTAAAG+AGG 0.482654 1_3:-49258520 Msa0122530:CDS
CAGAGATTGGTCAAAGGACA+TGG 0.483037 1_3:-49257135 Msa0122530:CDS
CCCAACCAGCATCATTATTG+TGG 0.485486 1_3:+49256735 None:intergenic
TTTGAACGGCGGTGGTGCAC+CGG 0.486910 1_3:-49258589 Msa0122530:CDS
AGCAGCGTTGGTGTTATACT+TGG 0.487190 1_3:+49258815 None:intergenic
ATTTAATTATCACAGGGGAT+TGG 0.494169 1_3:-49258154 Msa0122530:intron
AGTCGCCGGAGTAATGATTC+CGG 0.494324 1_3:-49258684 Msa0122530:CDS
AAGGACATGGGGTTTAATGA+AGG 0.494662 1_3:-49257122 Msa0122530:CDS
TCATCTAATAAGAAAGCTGC+TGG 0.498028 1_3:-49256662 Msa0122530:CDS
TCAAAGGGAAGGCCGCCGAT+GGG 0.498527 1_3:-49258711 Msa0122530:CDS
AGTGTAGAAGGATGGAAATG+AGG 0.500129 1_3:+49259144 None:intergenic
CAGTCCTTTCACATGCATAG+TGG 0.500156 1_3:+49255876 None:intergenic
GATAGGGAAGGAGGTTCGGG+TGG 0.503166 1_3:-49258648 Msa0122530:CDS
GCCGGAGTAATGATTCCGGC+TGG 0.503400 1_3:-49258680 Msa0122530:CDS
GGTGGGAAGTATGTTGGGTT+CGG 0.503415 1_3:-49258435 Msa0122530:CDS
GCTGCTAATGCTGTTCAGAC+TGG 0.505364 1_3:-49258106 Msa0122530:CDS
GGAAGGCGGTTATGATCAAA+AGG 0.509923 1_3:-49257194 Msa0122530:CDS
CGGGTTGGGATTGAAGGTCC+CGG 0.513419 1_3:+49259084 None:intergenic
TCGCAAGGTGGGAAGTATGT+TGG 0.513815 1_3:-49258441 Msa0122530:CDS
CCCACAATAATGATGCTGGT+TGG 0.515926 1_3:-49256736 Msa0122530:CDS
GACTTCCACCGTCGCAAGGT+GGG 0.517045 1_3:-49258452 Msa0122530:CDS
TTTGGCTTCACAGAAGGTTG+AGG 0.518131 1_3:-49257089 Msa0122530:CDS
CAATTGGAAGCTTCTGCGGC+GGG 0.519075 1_3:-49258528 Msa0122530:CDS
CTTTGTCGGAAGGTCGGTCG+TGG 0.519720 1_3:-49258767 Msa0122530:CDS
CCAACCAGCATCATTATTGT+GGG 0.519854 1_3:+49256736 None:intergenic
ACTCAAAAGACATCAGAGAT+TGG 0.520352 1_3:-49257148 Msa0122530:CDS
ATGGGAAATCAGATGACGCT+TGG 0.522747 1_3:-49256634 Msa0122530:CDS
GATCCGTCACCATGGATGCT+TGG 0.527744 1_3:-49258935 Msa0122530:CDS
GATTTCGGACCAAGCATCCA+TGG 0.529426 1_3:+49258926 None:intergenic
CCGGCTGGGATGATTGGGAT+AGG 0.534746 1_3:-49258665 Msa0122530:CDS
TCGACGCAGATCTTGTTGCC+GGG 0.535740 1_3:+49259065 None:intergenic
ACGATAAACTGAAGCAGCGT+TGG 0.536105 1_3:+49258803 None:intergenic
GAGGATGAAGTGTAGAAGGA+TGG 0.537467 1_3:+49259136 None:intergenic
GAACTGCTTATTCAACATCA+AGG 0.544748 1_3:+49255549 None:intergenic
TTCAGGCTTTGTCGGAAGGT+CGG 0.544881 1_3:-49258773 Msa0122530:CDS
CTCCGGCGACTCTGCCCCAT+CGG 0.545912 1_3:+49258696 None:intergenic
TTTAGGAATTTGAACGGCGG+TGG 0.547735 1_3:-49258597 Msa0122530:CDS
GCTCCCCACAATAATGATGC+TGG 0.549107 1_3:-49256740 Msa0122530:CDS
GTATTCTATTCCGAAGGAAA+CGG 0.550054 1_3:-49258847 Msa0122530:CDS
TGTGGATTGCTCCTCTGTGA+AGG 0.550251 1_3:+49258399 None:intergenic
TTGCTCCTCTGTGAAGGCAT+CGG 0.551923 1_3:+49258405 None:intergenic
CTCGAGACTGGTAATGCGGA+TGG 0.554512 1_3:+49255975 None:intergenic
GCTTCTGCGGCGGGTAAAGA+GGG 0.555155 1_3:-49258519 Msa0122530:CDS
CAATGGAACAATCTCGAGAC+TGG 0.558227 1_3:+49255963 None:intergenic
AAATGAGGGAGACAGACGTT+GGG 0.558815 1_3:+49259159 None:intergenic
CTTCATCCTCCGATCATCCA+TGG 0.559426 1_3:-49259123 Msa0122530:exon
AAACAATTCTTCCTGCACAT+AGG 0.561143 1_3:+49255808 None:intergenic
CTTTCGGACTGATGACATGC+AGG 0.562108 1_3:-49255921 Msa0122530:three_prime_UTR
GCGTGATCCTCCGGTTGTGA+AGG 0.563730 1_3:-49258745 Msa0122530:CDS
TCCGTCGACCTCGATCTCGC+CGG 0.565057 1_3:+49258570 None:intergenic
ATCAGATGACGCTTGGACAG+GGG 0.565298 1_3:-49256627 Msa0122530:CDS
TGCCAAGTATTCTATTCCGA+AGG 0.565535 1_3:-49258853 Msa0122530:CDS
TCTTTGTTTCAGGTCAAGGA+AGG 0.567944 1_3:-49257211 Msa0122530:intron
TACTTCCCACCTTGCGACGG+TGG 0.568939 1_3:+49258447 None:intergenic
GGCGGAGAATGAGTCAAGGC+CGG 0.569646 1_3:-49258478 Msa0122530:CDS
GTCGCAATTGGAAGCTTCTG+CGG 0.569797 1_3:-49258532 Msa0122530:CDS
CAAAGGGAAGGCCGCCGATG+GGG 0.571024 1_3:-49258710 Msa0122530:CDS
AGGGAGACAGACGTTGGGTG+AGG 0.573300 1_3:+49259164 None:intergenic
GTGATGCCGCCATGGATGAT+CGG 0.575331 1_3:+49259114 None:intergenic
GATCATCCATGGCGGCATCA+CGG 0.576667 1_3:-49259112 Msa0122530:exon
AGAATTTAGGTTCAAAGGGA+AGG 0.577046 1_3:-49258722 Msa0122530:CDS
TCAACTCCTTATTCATCTGG+TGG 0.577122 1_3:-49256845 Msa0122530:CDS
CGGCTGGGATGATTGGGATA+GGG 0.577559 1_3:-49258664 Msa0122530:CDS
TCGGAATAGAATACTTGGCA+AGG 0.577709 1_3:+49258856 None:intergenic
TCCCAATCATCCCAAGAGCT+GGG 0.579490 1_3:+49256803 None:intergenic
TTCATGTGCTTAGAATGCTC+CGG 0.579995 1_3:-49258996 Msa0122530:CDS
GAAGGACTTCCACCGTCGCA+AGG 0.582983 1_3:-49258456 Msa0122530:CDS
GAGCCGCCGTGATGCCGCCA+TGG 0.583473 1_3:+49259106 None:intergenic
TGGGATAATGCAAAAGATGA+TGG 0.583815 1_3:-49256707 Msa0122530:CDS
GAGTTCCCAAAATGTTACAT+AGG 0.584773 1_3:+49255746 None:intergenic
CCTATCCCAATCATCCCAGC+CGG 0.584873 1_3:+49258665 None:intergenic
CCGGAGTAATGATTCCGGCT+GGG 0.585313 1_3:-49258679 Msa0122530:CDS
TCAGATGACGCTTGGACAGG+GGG 0.587832 1_3:-49256626 Msa0122530:CDS
GAGGTTCGGGTGGTGATGTG+AGG 0.591884 1_3:-49258638 Msa0122530:CDS
GATGTGAGGAGTAAGTCGAC+GGG 0.593326 1_3:-49258624 Msa0122530:CDS
TCAAACTCTTGGGACGATTG+GGG 0.596473 1_3:-49256908 Msa0122530:CDS
AGGACATGGGGTTTAATGAA+GGG 0.599160 1_3:-49257121 Msa0122530:CDS
GTGGTGCACCGGCGAGATCG+AGG 0.600418 1_3:-49258578 Msa0122530:CDS
CCCAGCCGGAATCATTACTC+CGG 0.606336 1_3:+49258679 None:intergenic
CAGTGGGCATCAGTCTCCTA+CGG 0.607011 1_3:-49259023 Msa0122530:CDS
CTCTCAGAAGAATCCACAGT+GGG 0.607546 1_3:-49259039 Msa0122530:CDS
GCAATTGGAAGCTTCTGCGG+CGG 0.607693 1_3:-49258529 Msa0122530:CDS
CGGGACCTTCAATCCCAACC+CGG 0.609873 1_3:-49259083 Msa0122530:CDS
AAGCATCCATGGTGACGGAT+CGG 0.610332 1_3:+49258937 None:intergenic
TTGTTTCAGGTCAAGGAAGG+CGG 0.612416 1_3:-49257208 Msa0122530:intron
TTCAATCAAGGGAACAAAGG+AGG 0.615582 1_3:-49256986 Msa0122530:CDS
AGAGATTGGTCAAAGGACAT+GGG 0.615964 1_3:-49257134 Msa0122530:CDS
GGACATGGGGTTTAATGAAG+GGG 0.616409 1_3:-49257120 Msa0122530:CDS
GATTTCAATCAAGGGAACAA+AGG 0.616794 1_3:-49256989 Msa0122530:CDS
GGACCAAGCATCCATGGTGA+CGG 0.618778 1_3:+49258932 None:intergenic
CATGGTGACGGATCGGACGA+AGG 0.619426 1_3:+49258944 None:intergenic
CGGCGACTCTGCCCCATCGG+CGG 0.622822 1_3:+49258699 None:intergenic
TGATGTGAGGAGTAAGTCGA+CGG 0.623072 1_3:-49258625 Msa0122530:CDS
GAGAATGAGTCAAGGCCGGA+AGG 0.624456 1_3:-49258474 Msa0122530:CDS
CAATCTCGAGACTGGTAATG+CGG 0.626963 1_3:+49255971 None:intergenic
CTTCGTCCGATCCGTCACCA+TGG 0.629444 1_3:-49258943 Msa0122530:CDS
AAAACCACTATGCATGTGAA+AGG 0.630270 1_3:-49255880 Msa0122530:three_prime_UTR
GGACTTCCACCGTCGCAAGG+TGG 0.631829 1_3:-49258453 Msa0122530:CDS
ACATACTTCCCACCTTGCGA+CGG 0.631937 1_3:+49258444 None:intergenic
GATGATTGGGATAGGGAAGG+AGG 0.632481 1_3:-49258657 Msa0122530:CDS
AGACATCAGAGATTGGTCAA+AGG 0.632664 1_3:-49257141 Msa0122530:CDS
CAACTCCTTATTCATCTGGT+GGG 0.634524 1_3:-49256844 Msa0122530:CDS
CAGACGTTGGGTGAGGTGTG+AGG 0.635236 1_3:+49259171 None:intergenic
GGACCACAAAGATTCTAGGA+AGG 0.638994 1_3:-49256783 Msa0122530:CDS
GAAATGAGGGAGACAGACGT+TGG 0.642852 1_3:+49259158 None:intergenic
ACTATCAGGATTTCAATCAA+GGG 0.645448 1_3:-49256997 Msa0122530:CDS
GAGATTGGTCAAAGGACATG+GGG 0.646826 1_3:-49257133 Msa0122530:CDS
GAAGAGAACAATCTTCATCA+GGG 0.647329 1_3:-49256949 Msa0122530:CDS
GGCGAGATCGAGGTCGACGG+AGG 0.649649 1_3:-49258568 Msa0122530:CDS
CAACCAGCATCATTATTGTG+GGG 0.653135 1_3:+49256737 None:intergenic
ACCGGCGAGATCGAGGTCGA+CGG 0.653631 1_3:-49258571 Msa0122530:CDS
TGGGATGATTGGGATAGGGA+AGG 0.657232 1_3:-49258660 Msa0122530:CDS
AACTATGAGAGACACAACGA+AGG 0.658598 1_3:+49255524 None:intergenic
ATGACATGCAGGCAAAGCCA+TGG 0.659819 1_3:-49255910 Msa0122530:three_prime_UTR
AGATGTGAACACCGAGACCA+CGG 0.664997 1_3:+49258967 None:intergenic
TAAGCACATGAAGATGCCGT+AGG 0.669663 1_3:+49259007 None:intergenic
AAATTCTCCTTCACAACCGG+AGG 0.674563 1_3:+49258738 None:intergenic
AGATGGCGGAGAATGAGTCA+AGG 0.685000 1_3:-49258482 Msa0122530:CDS
GACATGGGGTTTAATGAAGG+GGG 0.697882 1_3:-49257119 Msa0122530:CDS
ATGTGAGGAGTAAGTCGACG+GGG 0.706562 1_3:-49258623 Msa0122530:CDS
TAGGAGACTGATGCCCACTG+TGG 0.710667 1_3:+49259026 None:intergenic
ATGCCGCCATGGATGATCGG+AGG 0.718825 1_3:+49259117 None:intergenic
CATCCATGGCGGCATCACGG+CGG 0.720125 1_3:-49259109 Msa0122530:exon
GAATGCTCCGGAAAACACCG+TGG 0.731228 1_3:-49258984 Msa0122530:CDS
TGTGAGGAGTAAGTCGACGG+GGG 0.747661 1_3:-49258622 Msa0122530:CDS
CATCCTCCGATCATCCATGG+CGG 0.756295 1_3:-49259120 Msa0122530:exon
CGACGGAGGATATTTATACG+CGG 0.767034 1_3:-49258554 Msa0122530:CDS
CTAGTCCGATGCCTTCACAG+AGG 0.771719 1_3:-49258410 Msa0122530:CDS
GCTCTCAGAAGAATCCACAG+TGG 0.805841 1_3:-49259040 Msa0122530:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GCAAAAAAAAAAAAAAAATT+AGG + chr1_3:49257499-49257518 None:intergenic 10.0%
!! TTATTGTATTTAATTATCAC+AGG - chr1_3:49256569-49256588 Msa0122530:intron 15.0%
!! TATTGTATTTAATTATCACA+GGG - chr1_3:49256570-49256589 Msa0122530:intron 15.0%
!!! TTATCAGTGTTATAATTTTT+TGG - chr1_3:49258384-49258403 Msa0122530:CDS 15.0%
!!! TATCAGTGTTATAATTTTTT+GGG - chr1_3:49258385-49258404 Msa0122530:CDS 15.0%
!! TTATCTATTAAGGAAATAAA+TGG - chr1_3:49258579-49258598 Msa0122530:CDS 15.0%
!!! TGATATTTTTATTTCAAATG+AGG + chr1_3:49258713-49258732 None:intergenic 15.0%
!!! CATTTTTTTGATTTGGATTT+CGG + chr1_3:49255822-49255841 None:intergenic 20.0%
!! ATTGTATTTAATTATCACAG+GGG - chr1_3:49256571-49256590 Msa0122530:intron 20.0%
!!! TATTTGGATTATTTTGTTCA+TGG - chr1_3:49256670-49256689 Msa0122530:CDS 20.0%
!!! ATTTGGATTATTTTGTTCAT+GGG - chr1_3:49256671-49256690 Msa0122530:CDS 20.0%
!! GAAAATTTGTATTTGTTTCA+CGG - chr1_3:49256725-49256744 Msa0122530:CDS 20.0%
!!! TTCATTTATTTCTTTTTAGC+TGG + chr1_3:49257034-49257053 None:intergenic 20.0%
!! AGCTAAAAAGAAATAAATGA+AGG - chr1_3:49257033-49257052 Msa0122530:CDS 20.0%
!! GCTAAAAAGAAATAAATGAA+GGG - chr1_3:49257034-49257053 Msa0122530:CDS 20.0%
!!! TGTATTGATAATGTATTTGT+GGG - chr1_3:49257089-49257108 Msa0122530:CDS 20.0%
!! AAAAAGGAAAGAAACTAATT+GGG + chr1_3:49257358-49257377 None:intergenic 20.0%
!! AAAAAAGGAAAGAAACTAAT+TGG + chr1_3:49257359-49257378 None:intergenic 20.0%
!! TATACCAATTAATGCAAAAA+AGG + chr1_3:49257374-49257393 None:intergenic 20.0%
!! AAATTAGGCAAAGAAAAAAT+GGG + chr1_3:49257484-49257503 None:intergenic 20.0%
!! AAAATTAGGCAAAGAAAAAA+TGG + chr1_3:49257485-49257504 None:intergenic 20.0%
!! CATTTACAAAATGTTAAGTA+GGG + chr1_3:49258271-49258290 None:intergenic 20.0%
!! TCATTTACAAAATGTTAAGT+AGG + chr1_3:49258272-49258291 None:intergenic 20.0%
!!! TTTTTTCCTATGTAACATTT+TGG - chr1_3:49258978-49258997 Msa0122530:CDS 20.0%
!!! TTTTTCCTATGTAACATTTT+GGG - chr1_3:49258979-49258998 Msa0122530:CDS 20.0%
!!! CTTCTTAATTTAACTTTGTA+TGG - chr1_3:49259150-49259169 Msa0122530:five_prime_UTR 20.0%
! CGAAATCCAAATCAAAAAAA+TGG - chr1_3:49255820-49255839 Msa0122530:three_prime_UTR 25.0%
!! GAAAAATAATCATTTTGCTG+TGG + chr1_3:49256352-49256371 None:intergenic 25.0%
!!! TTATTTTTCTGTTGTTTCAC+AGG - chr1_3:49256363-49256382 Msa0122530:intron 25.0%
! TTGAATGTAATCAAATGTGT+CGG + chr1_3:49256463-49256482 None:intergenic 25.0%
! TGATTACATTCAATTACTAC+CGG - chr1_3:49256470-49256489 Msa0122530:intron 25.0%
!!! TTTGGATTATTTTGTTCATG+GGG - chr1_3:49256672-49256691 Msa0122530:CDS 25.0%
! CAACAAATTGAACTAATACA+TGG + chr1_3:49256774-49256793 None:intergenic 25.0%
!! CTATTTGATAACACTTATCT+CGG + chr1_3:49256885-49256904 None:intergenic 25.0%
! TGACTGCATTAAAAAGATAA+CGG + chr1_3:49256995-49257014 None:intergenic 25.0%
!!! GTGTATTGATAATGTATTTG+TGG - chr1_3:49257088-49257107 Msa0122530:CDS 25.0%
!!! TGATTTTATTTCAATTGCAC+TGG + chr1_3:49257318-49257337 None:intergenic 25.0%
!!! CTTTCCTTTTTTGCATTAAT+TGG - chr1_3:49257367-49257386 Msa0122530:intron 25.0%
!!! TTTTTTTTGCTCTTTGTTTC+AGG - chr1_3:49257509-49257528 Msa0122530:intron 25.0%
!!! GGATTTGATAACTTTTATGA+AGG - chr1_3:49258044-49258063 Msa0122530:intron 25.0%
! TTTCCTTAATAGATAACCAA+CGG + chr1_3:49258575-49258594 None:intergenic 25.0%
!!! AATATCATAATTTTTGGACC+AGG - chr1_3:49258726-49258745 Msa0122530:CDS 25.0%
!!! AGGAAGAATTGTTTTTTTTG+AGG - chr1_3:49258931-49258950 Msa0122530:CDS 25.0%
! ACATAGGAAAAAATTACAAG+TGG + chr1_3:49258971-49258990 None:intergenic 25.0%
!! TAGAACTATATTTTTCCAAC+CGG + chr1_3:49259009-49259028 None:intergenic 25.0%
!!! ATTTACAAGTGTTGAAAGAA+AGG - chr1_3:49259030-49259049 Msa0122530:CDS 25.0%
!!! CAGCTTCCATTTTTTTGATT+TGG + chr1_3:49255829-49255848 None:intergenic 30.0%
CAAATCAAAAAAATGGAAGC+TGG - chr1_3:49255827-49255846 Msa0122530:three_prime_UTR 30.0%
! AAGGAGAATTTAGGTTCAAA+GGG - chr1_3:49256004-49256023 Msa0122530:intron 30.0%
CATGCTTTATAGTTGATTAG+TGG - chr1_3:49256523-49256542 Msa0122530:intron 30.0%
ATTTAATTATCACAGGGGAT+TGG - chr1_3:49256576-49256595 Msa0122530:intron 30.0%
CACAAAAGAGATTACTTCTA+AGG - chr1_3:49256647-49256666 Msa0122530:CDS 30.0%
!! GAGATTACTTCTAAGGTATT+TGG - chr1_3:49256654-49256673 Msa0122530:CDS 30.0%
!! GGGAATTGATAATGTTAACT+TGG - chr1_3:49257109-49257128 Msa0122530:CDS 30.0%
! TTATGACTTTTAGCATAGTG+TGG - chr1_3:49257248-49257267 Msa0122530:intron 30.0%
! TATGACTTTTAGCATAGTGT+GGG - chr1_3:49257249-49257268 Msa0122530:intron 30.0%
CAAATTCGACTACTAATAAC+TGG - chr1_3:49257682-49257701 Msa0122530:intron 30.0%
CGAAATGAGAATGATAGAAA+TGG - chr1_3:49257708-49257727 Msa0122530:intron 30.0%
TACTATCAGGATTTCAATCA+AGG - chr1_3:49257732-49257751 Msa0122530:intron 30.0%
ACTATCAGGATTTCAATCAA+GGG - chr1_3:49257733-49257752 Msa0122530:intron 30.0%
! AGATCATGCAAATCTTTTGT+AGG - chr1_3:49258147-49258166 Msa0122530:intron 30.0%
!! AGGCTTTCACATTTTATTTC+TGG - chr1_3:49258167-49258186 Msa0122530:intron 30.0%
GTTAAGTAGGGATAAAGATT+GGG + chr1_3:49258259-49258278 None:intergenic 30.0%
TGTTAAGTAGGGATAAAGAT+TGG + chr1_3:49258260-49258279 None:intergenic 30.0%
!!! GTGTTATAATTTTTTGGGAG+TGG - chr1_3:49258390-49258409 Msa0122530:CDS 30.0%
TGGAATTATTTAACACGACA+AGG + chr1_3:49258443-49258462 None:intergenic 30.0%
TAAATAATTCCAGCTAAGTG+CGG - chr1_3:49258451-49258470 Msa0122530:CDS 30.0%
! CAATTTTATAGGTTAGTGAG+TGG + chr1_3:49258548-49258567 None:intergenic 30.0%
TTAGATACTTTAACCTGACA+TGG - chr1_3:49258603-49258622 Msa0122530:CDS 30.0%
ACAAAAATTACTGCAGCTTT+CGG - chr1_3:49258793-49258812 Msa0122530:CDS 30.0%
!! GCTCTGAAGAATTAAGATTT+GGG + chr1_3:49259064-49259083 None:intergenic 30.0%
!! TGCTCTGAAGAATTAAGATT+TGG + chr1_3:49259065-49259084 None:intergenic 30.0%
ATCAAAAAAATGGAAGCTGG+TGG - chr1_3:49255830-49255849 Msa0122530:three_prime_UTR 35.0%
TTCCTTCGGAATAGAATACT+TGG + chr1_3:49255882-49255901 None:intergenic 35.0%
GTATTCTATTCCGAAGGAAA+CGG - chr1_3:49255883-49255902 Msa0122530:three_prime_UTR 35.0%
GTAACAATATCCGTTTCCTT+CGG + chr1_3:49255896-49255915 None:intergenic 35.0%
! GAAGGAGAATTTAGGTTCAA+AGG - chr1_3:49256003-49256022 Msa0122530:intron 35.0%
! AGAATTTAGGTTCAAAGGGA+AGG - chr1_3:49256008-49256027 Msa0122530:intron 35.0%
!! GGGGATTTTAGGAATTTGAA+CGG - chr1_3:49256127-49256146 Msa0122530:intron 35.0%
!! GATTTTAGGAATTTGAACGG+CGG - chr1_3:49256130-49256149 Msa0122530:intron 35.0%
!!! ATTTTTTGCGAAGAAGATGG+CGG - chr1_3:49256234-49256253 Msa0122530:intron 35.0%
ACATGGTAGAAATATCCCTA+AGG + chr1_3:49256757-49256776 None:intergenic 35.0%
! GCTATTTGATAACACTGTAG+TGG + chr1_3:49256810-49256829 None:intergenic 35.0%
!!! TAGCTGTTTTTCGAATTCCA+CGG + chr1_3:49256841-49256860 None:intergenic 35.0%
TGATGTGTGATTGACAATAC+TGG - chr1_3:49256965-49256984 Msa0122530:CDS 35.0%
TCAGAACAGTGGATGTTAAT+TGG - chr1_3:49257205-49257224 Msa0122530:intron 35.0%
ACAGTGGATGTTAATTGGAT+CGG - chr1_3:49257210-49257229 Msa0122530:intron 35.0%
! ATGACTTTTAGCATAGTGTG+GGG - chr1_3:49257250-49257269 Msa0122530:intron 35.0%
!! TGCTAACTGTTTGCTTTTCA+CGG - chr1_3:49257445-49257464 Msa0122530:intron 35.0%
ACTCAAAAGACATCAGAGAT+TGG - chr1_3:49257582-49257601 Msa0122530:intron 35.0%
TGATAGAAATGGCTACTATC+AGG - chr1_3:49257719-49257738 Msa0122530:intron 35.0%
GATTTCAATCAAGGGAACAA+AGG - chr1_3:49257741-49257760 Msa0122530:intron 35.0%
AAAGGAGGTAATTCTTCTAC+TGG - chr1_3:49257759-49257778 Msa0122530:intron 35.0%
GAAGAGAACAATCTTCATCA+GGG - chr1_3:49257781-49257800 Msa0122530:intron 35.0%
AAACTCAAAGCTCAAACTCT+TGG - chr1_3:49257811-49257830 Msa0122530:intron 35.0%
AACTCAAAGCTCAAACTCTT+GGG - chr1_3:49257812-49257831 Msa0122530:intron 35.0%
AAGGGAGAACCTACTAATAA+AGG - chr1_3:49257861-49257880 Msa0122530:intron 35.0%
! GGAGTTGATCCTTTATTAGT+AGG + chr1_3:49257873-49257892 None:intergenic 35.0%
TGGGATAATGCAAAAGATGA+TGG - chr1_3:49258023-49258042 Msa0122530:intron 35.0%
TCATCTAATAAGAAAGCTGC+TGG - chr1_3:49258068-49258087 Msa0122530:intron 35.0%
CCTCTCATATACACAGTTAT+AGG + chr1_3:49258199-49258218 None:intergenic 35.0%
CCTATAACTGTGTATATGAG+AGG - chr1_3:49258196-49258215 Msa0122530:intron 35.0%
ATATTAAAGGGAGAGATGAG+AGG + chr1_3:49258418-49258437 None:intergenic 35.0%
CACGACAAGGTCATATTAAA+GGG + chr1_3:49258430-49258449 None:intergenic 35.0%
ACACGACAAGGTCATATTAA+AGG + chr1_3:49258431-49258450 None:intergenic 35.0%
! TGACCGTTGGTTATCTATTA+AGG - chr1_3:49258569-49258588 Msa0122530:CDS 35.0%
! GCAGTAATTTTTGTCACCAA+TGG + chr1_3:49258787-49258806 None:intergenic 35.0%
!! TCACATGCATAGTGGTTTTA+GGG + chr1_3:49258849-49258868 None:intergenic 35.0%
! TTCACATGCATAGTGGTTTT+AGG + chr1_3:49258850-49258869 None:intergenic 35.0%
AAAACCACTATGCATGTGAA+AGG - chr1_3:49258850-49258869 Msa0122530:CDS 35.0%
AAACTCAAAAACCTATGTGC+AGG - chr1_3:49258911-49258930 Msa0122530:CDS 35.0%
AAACAATTCTTCCTGCACAT+AGG + chr1_3:49258925-49258944 None:intergenic 35.0%
GAGTTCCCAAAATGTTACAT+AGG + chr1_3:49258987-49259006 None:intergenic 35.0%
!! ATGTAACATTTTGGGAACTC+CGG - chr1_3:49258987-49259006 Msa0122530:CDS 35.0%
GAACTGCTTATTCAACATCA+AGG + chr1_3:49259184-49259203 None:intergenic 35.0%
GTGTAGAAGGATGGAAATGA+GGG + chr1_3:49255588-49255607 None:intergenic 40.0%
AGTGTAGAAGGATGGAAATG+AGG + chr1_3:49255589-49255608 None:intergenic 40.0%
TTCATGTGCTTAGAATGCTC+CGG - chr1_3:49255734-49255753 Msa0122530:three_prime_UTR 40.0%
TCGGAATAGAATACTTGGCA+AGG + chr1_3:49255877-49255896 None:intergenic 40.0%
TGCCAAGTATTCTATTCCGA+AGG - chr1_3:49255877-49255896 Msa0122530:three_prime_UTR 40.0%
CTGCTTCAGTTTATCGTGAT+CGG - chr1_3:49255933-49255952 Msa0122530:three_prime_UTR 40.0%
AGTTTATCGTGATCGGATTC+AGG - chr1_3:49255940-49255959 Msa0122530:three_prime_UTR 40.0%
CCTAAATTCTCCTTCACAAC+CGG + chr1_3:49255998-49256017 None:intergenic 40.0%
TATTTATACGCGGTCGCAAT+TGG - chr1_3:49256186-49256205 Msa0122530:intron 40.0%
!!! GGGATTTTTTGCGAAGAAGA+TGG - chr1_3:49256231-49256250 Msa0122530:intron 40.0%
CATGACTCGTCGAAAAACAA+AGG + chr1_3:49256408-49256427 None:intergenic 40.0%
TCAAATAGCTGATATAGCCG+TGG - chr1_3:49256821-49256840 Msa0122530:CDS 40.0%
CTAGTATGCTATAGCACTAC+AGG + chr1_3:49256915-49256934 None:intergenic 40.0%
TAGAGGAAAGCTGTTGAATG+AGG - chr1_3:49257273-49257292 Msa0122530:intron 40.0%
AGCTGTTGAATGAGGTCAAT+AGG - chr1_3:49257281-49257300 Msa0122530:intron 40.0%
GCTGTTGAATGAGGTCAATA+GGG - chr1_3:49257282-49257301 Msa0122530:intron 40.0%
AGTACCTTCATGATTGTCTC+TGG - chr1_3:49257408-49257427 Msa0122530:intron 40.0%
!! GCTTTTCACGGTATTTTTGC+TGG - chr1_3:49257457-49257476 Msa0122530:intron 40.0%
! TTGCTCTTTGTTTCAGGTCA+AGG - chr1_3:49257515-49257534 Msa0122530:intron 40.0%
! TCTTTGTTTCAGGTCAAGGA+AGG - chr1_3:49257519-49257538 Msa0122530:intron 40.0%
! AGACATCAGAGATTGGTCAA+AGG - chr1_3:49257589-49257608 Msa0122530:intron 40.0%
! AGAGATTGGTCAAAGGACAT+GGG - chr1_3:49257596-49257615 Msa0122530:intron 40.0%
AAGGACATGGGGTTTAATGA+AGG - chr1_3:49257608-49257627 Msa0122530:intron 40.0%
AGGACATGGGGTTTAATGAA+GGG - chr1_3:49257609-49257628 Msa0122530:intron 40.0%
TTCAATCAAGGGAACAAAGG+AGG - chr1_3:49257744-49257763 Msa0122530:intron 40.0%
GGAAGAGAACAATCTTCATC+AGG - chr1_3:49257780-49257799 Msa0122530:intron 40.0%
ATTGGGGCCAAAAAGATAGT+TGG - chr1_3:49257838-49257857 Msa0122530:intron 40.0%
GGCCAAAAAGATAGTTGGAA+GGG - chr1_3:49257843-49257862 Msa0122530:intron 40.0%
! CTCCCTTCCAACTATCTTTT+TGG + chr1_3:49257848-49257867 None:intergenic 40.0%
GGATCAACTCCTTATTCATC+TGG - chr1_3:49257882-49257901 Msa0122530:intron 40.0%
TCAACTCCTTATTCATCTGG+TGG - chr1_3:49257885-49257904 Msa0122530:intron 40.0%
CAACTCCTTATTCATCTGGT+GGG - chr1_3:49257886-49257905 Msa0122530:intron 40.0%
ATTGGGACCACAAAGATTCT+AGG - chr1_3:49257943-49257962 Msa0122530:intron 40.0%
CTTCCTTCCTAGAATCTTTG+TGG + chr1_3:49257953-49257972 None:intergenic 40.0%
CAACCAGCATCATTATTGTG+GGG + chr1_3:49257996-49258015 None:intergenic 40.0%
CCAACCAGCATCATTATTGT+GGG + chr1_3:49257997-49258016 None:intergenic 40.0%
! CCACAATAATGATGCTGGTT+GGG - chr1_3:49257995-49258014 Msa0122530:intron 40.0%
AAGAAAGCTGCTGGACATAA+TGG - chr1_3:49258077-49258096 Msa0122530:intron 40.0%
AGAAAGCTGCTGGACATAAT+GGG - chr1_3:49258078-49258097 Msa0122530:intron 40.0%
! TTTTGCCCAATCTCTTCTCT+TGG - chr1_3:49258297-49258316 Msa0122530:intron 40.0%
TGAAGTTCAGTGGTCATGTA+GGG + chr1_3:49258331-49258350 None:intergenic 40.0%
GGATTATTCCTGAAGTTCAG+TGG + chr1_3:49258341-49258360 None:intergenic 40.0%
CAGGAATAATCCATGCTACT+TGG - chr1_3:49258349-49258368 Msa0122530:intron 40.0%
! TAATCCATGCTACTTGGAGT+TGG - chr1_3:49258355-49258374 Msa0122530:intron 40.0%
ATTTCCAACTCCAAGTAGCA+TGG + chr1_3:49258362-49258381 None:intergenic 40.0%
!! AGAATGCTTCTAGCTTTGAG+TGG - chr1_3:49258474-49258493 Msa0122530:CDS 40.0%
TGACATTGCAGACAAGTAGA+AGG - chr1_3:49258505-49258524 Msa0122530:CDS 40.0%
GACATTGCAGACAAGTAGAA+GGG - chr1_3:49258506-49258525 Msa0122530:CDS 40.0%
! CCAACGGTCAGCAATTTTAT+AGG + chr1_3:49258559-49258578 None:intergenic 40.0%
CCTATAAAATTGCTGACCGT+TGG - chr1_3:49258556-49258575 Msa0122530:CDS 40.0%
!!! CACATGCATAGTGGTTTTAG+GGG + chr1_3:49258848-49258867 None:intergenic 40.0%
TGTGAGGAGTTTGGAGAAAG+TGG + chr1_3:49255546-49255565 None:intergenic 45.0%
AAATGAGGGAGACAGACGTT+GGG + chr1_3:49255574-49255593 None:intergenic 45.0%
GAGGATGAAGTGTAGAAGGA+TGG + chr1_3:49255597-49255616 None:intergenic 45.0%
ATCGGAGGATGAAGTGTAGA+AGG + chr1_3:49255601-49255620 None:intergenic 45.0%
CTCTCAGAAGAATCCACAGT+GGG - chr1_3:49255691-49255710 Msa0122530:three_prime_UTR 45.0%
TAAGCACATGAAGATGCCGT+AGG + chr1_3:49255726-49255745 None:intergenic 45.0%
!! AGCAGCGTTGGTGTTATACT+TGG + chr1_3:49255918-49255937 None:intergenic 45.0%
ACGATAAACTGAAGCAGCGT+TGG + chr1_3:49255930-49255949 None:intergenic 45.0%
! TGATCGGATTCAGGCTTTGT+CGG - chr1_3:49255949-49255968 Msa0122530:three_prime_UTR 45.0%
AAATTCTCCTTCACAACCGG+AGG + chr1_3:49255995-49256014 None:intergenic 45.0%
CCGGTTGTGAAGGAGAATTT+AGG - chr1_3:49255995-49256014 Msa0122530:intron 45.0%
TGATGTGAGGAGTAAGTCGA+CGG - chr1_3:49256105-49256124 Msa0122530:intron 45.0%
TTTAGGAATTTGAACGGCGG+TGG - chr1_3:49256133-49256152 Msa0122530:intron 45.0%
CGACGGAGGATATTTATACG+CGG - chr1_3:49256176-49256195 Msa0122530:intron 45.0%
! GGGGATTGGTAAGTTGTCAT+TGG - chr1_3:49256590-49256609 Msa0122530:intron 45.0%
TGTTTCACGGAATGCACCTT+AGG - chr1_3:49256738-49256757 Msa0122530:CDS 45.0%
GTTTCACGGAATGCACCTTA+GGG - chr1_3:49256739-49256758 Msa0122530:CDS 45.0%
TCTCGGCATATCACAAATCG+TGG + chr1_3:49256868-49256887 None:intergenic 45.0%
TTTAGCATAGTGTGGGGTAG+AGG - chr1_3:49257256-49257275 Msa0122530:intron 45.0%
GATGCCAGAGACAATCATGA+AGG + chr1_3:49257415-49257434 None:intergenic 45.0%
! TTGTTTCAGGTCAAGGAAGG+CGG - chr1_3:49257522-49257541 Msa0122530:intron 45.0%
GGAAGGCGGTTATGATCAAA+AGG - chr1_3:49257536-49257555 Msa0122530:intron 45.0%
! CAGAGATTGGTCAAAGGACA+TGG - chr1_3:49257595-49257614 Msa0122530:intron 45.0%
! GAGATTGGTCAAAGGACATG+GGG - chr1_3:49257597-49257616 Msa0122530:intron 45.0%
GGACATGGGGTTTAATGAAG+GGG - chr1_3:49257610-49257629 Msa0122530:intron 45.0%
GACATGGGGTTTAATGAAGG+GGG - chr1_3:49257611-49257630 Msa0122530:intron 45.0%
! TTTGGCTTCACAGAAGGTTG+AGG - chr1_3:49257641-49257660 Msa0122530:intron 45.0%
CTCAAACTCTTGGGACGATT+GGG - chr1_3:49257821-49257840 Msa0122530:intron 45.0%
TCAAACTCTTGGGACGATTG+GGG - chr1_3:49257822-49257841 Msa0122530:intron 45.0%
GGGCCAAAAAGATAGTTGGA+AGG - chr1_3:49257842-49257861 Msa0122530:intron 45.0%
TACTCACAATCCCAGCTCTT+GGG - chr1_3:49257917-49257936 Msa0122530:intron 45.0%
! GGACCACAAAGATTCTAGGA+AGG - chr1_3:49257947-49257966 Msa0122530:intron 45.0%
CCCACAATAATGATGCTGGT+TGG - chr1_3:49257994-49258013 Msa0122530:intron 45.0%
CCCAACCAGCATCATTATTG+TGG + chr1_3:49257998-49258017 None:intergenic 45.0%
! AATAATGATGCTGGTTGGGC+TGG - chr1_3:49257999-49258018 Msa0122530:intron 45.0%
ATGGGAAATCAGATGACGCT+TGG - chr1_3:49258096-49258115 Msa0122530:CDS 45.0%
AAATCAGATGACGCTTGGAC+AGG - chr1_3:49258101-49258120 Msa0122530:CDS 45.0%
AATCAGATGACGCTTGGACA+GGG - chr1_3:49258102-49258121 Msa0122530:CDS 45.0%
CGAGACCAAGAGAAGAGATT+GGG + chr1_3:49258305-49258324 None:intergenic 45.0%
ACGAGACCAAGAGAAGAGAT+TGG + chr1_3:49258306-49258325 None:intergenic 45.0%
CTGAAGTTCAGTGGTCATGT+AGG + chr1_3:49258332-49258351 None:intergenic 45.0%
CTACATGACCACTGAACTTC+AGG - chr1_3:49258330-49258349 Msa0122530:intron 45.0%
!! TGCTTCTAGCTTTGAGTGGA+AGG - chr1_3:49258478-49258497 Msa0122530:CDS 45.0%
!! TCTAGCTTTGAGTGGAAGGT+AGG - chr1_3:49258482-49258501 Msa0122530:CDS 45.0%
CTGCATCATATGACCATGTC+AGG + chr1_3:49258619-49258638 None:intergenic 45.0%
TAATGCGGATGGATGAAACC+TGG + chr1_3:49258747-49258766 None:intergenic 45.0%
! CAATCTCGAGACTGGTAATG+CGG + chr1_3:49258762-49258781 None:intergenic 45.0%
CAATGGAACAATCTCGAGAC+TGG + chr1_3:49258770-49258789 None:intergenic 45.0%
CAGTCTCGAGATTGTTCCAT+TGG - chr1_3:49258768-49258787 Msa0122530:CDS 45.0%
CAGTCCTTTCACATGCATAG+TGG + chr1_3:49258857-49258876 None:intergenic 45.0%
!! AACATTTTGGGAACTCCGGT+TGG - chr1_3:49258991-49259010 Msa0122530:CDS 45.0%
!!! AATAAAAATATCATAATTTT+TGG - chr1_3:49258720-49258739 Msa0122530:CDS 5.0%
GAAATGAGGGAGACAGACGT+TGG + chr1_3:49255575-49255594 None:intergenic 50.0%
CTTCATCCTCCGATCATCCA+TGG - chr1_3:49255607-49255626 Msa0122530:three_prime_UTR 50.0%
ATCGACGCAGATCTTGTTGC+CGG + chr1_3:49255669-49255688 None:intergenic 50.0%
GCTCTCAGAAGAATCCACAG+TGG - chr1_3:49255690-49255709 Msa0122530:three_prime_UTR 50.0%
AGATGTGAACACCGAGACCA+CGG + chr1_3:49255766-49255785 None:intergenic 50.0%
!! AAGCATCCATGGTGACGGAT+CGG + chr1_3:49255796-49255815 None:intergenic 50.0%
GATTTCGGACCAAGCATCCA+TGG + chr1_3:49255807-49255826 None:intergenic 50.0%
! TTCAGGCTTTGTCGGAAGGT+CGG - chr1_3:49255957-49255976 Msa0122530:three_prime_UTR 50.0%
AGTCGCCGGAGTAATGATTC+CGG - chr1_3:49256046-49256065 Msa0122530:intron 50.0%
ATGATTCCGGCTGGGATGAT+TGG - chr1_3:49256059-49256078 Msa0122530:intron 50.0%
TGATTCCGGCTGGGATGATT+GGG - chr1_3:49256060-49256079 Msa0122530:intron 50.0%
TGGGATGATTGGGATAGGGA+AGG - chr1_3:49256070-49256089 Msa0122530:intron 50.0%
GATGATTGGGATAGGGAAGG+AGG - chr1_3:49256073-49256092 Msa0122530:intron 50.0%
TTGGGATAGGGAAGGAGGTT+CGG - chr1_3:49256078-49256097 Msa0122530:intron 50.0%
GATGTGAGGAGTAAGTCGAC+GGG - chr1_3:49256106-49256125 Msa0122530:intron 50.0%
ATGTGAGGAGTAAGTCGACG+GGG - chr1_3:49256107-49256126 Msa0122530:intron 50.0%
! GTAAGTCGACGGGGGATTTT+AGG - chr1_3:49256116-49256135 Msa0122530:intron 50.0%
GTCGCAATTGGAAGCTTCTG+CGG - chr1_3:49256198-49256217 Msa0122530:intron 50.0%
!! AGATGGCGGAGAATGAGTCA+AGG - chr1_3:49256248-49256267 Msa0122530:intron 50.0%
ACATACTTCCCACCTTGCGA+CGG + chr1_3:49256289-49256308 None:intergenic 50.0%
! TCGCAAGGTGGGAAGTATGT+TGG - chr1_3:49256289-49256308 Msa0122530:intron 50.0%
! CGCAAGGTGGGAAGTATGTT+GGG - chr1_3:49256290-49256309 Msa0122530:intron 50.0%
! GGTGGGAAGTATGTTGGGTT+CGG - chr1_3:49256295-49256314 Msa0122530:intron 50.0%
! TTGCTCCTCTGTGAAGGCAT+CGG + chr1_3:49256328-49256347 None:intergenic 50.0%
! TGTGGATTGCTCCTCTGTGA+AGG + chr1_3:49256334-49256353 None:intergenic 50.0%
GCTGCTAATGCTGTTCAGAC+TGG - chr1_3:49256624-49256643 Msa0122530:CDS 50.0%
! ATCCACTGTTCTGAGCAACG+AGG + chr1_3:49257199-49257218 None:intergenic 50.0%
GGGTTTAATGAAGGGGGTCA+TGG - chr1_3:49257617-49257636 Msa0122530:intron 50.0%
AATGAAGGGGGTCATGGCTT+TGG - chr1_3:49257623-49257642 Msa0122530:intron 50.0%
!! CATGGCTTTGGCTTCACAGA+AGG - chr1_3:49257635-49257654 Msa0122530:intron 50.0%
GCTCAAACTCTTGGGACGAT+TGG - chr1_3:49257820-49257839 Msa0122530:intron 50.0%
GACTGCCCACCAGATGAATA+AGG + chr1_3:49257894-49257913 None:intergenic 50.0%
! TATTCATCTGGTGGGCAGTC+TGG - chr1_3:49257894-49257913 Msa0122530:intron 50.0%
GTACTCACAATCCCAGCTCT+TGG - chr1_3:49257916-49257935 Msa0122530:intron 50.0%
ATCCCAGCTCTTGGGATGAT+TGG - chr1_3:49257925-49257944 Msa0122530:intron 50.0%
TCCCAGCTCTTGGGATGATT+GGG - chr1_3:49257926-49257945 Msa0122530:intron 50.0%
TCCCAATCATCCCAAGAGCT+GGG + chr1_3:49257930-49257949 None:intergenic 50.0%
GCTCCCCACAATAATGATGC+TGG - chr1_3:49257990-49258009 Msa0122530:intron 50.0%
ATCAGATGACGCTTGGACAG+GGG - chr1_3:49258103-49258122 Msa0122530:CDS 50.0%
AAGCATTCTCCGCACTTAGC+TGG + chr1_3:49258463-49258482 None:intergenic 50.0%
CTTTCGGACTGATGACATGC+AGG - chr1_3:49258809-49258828 Msa0122530:CDS 50.0%
ATGACATGCAGGCAAAGCCA+TGG - chr1_3:49258820-49258839 Msa0122530:CDS 50.0%
!!! TAGTGGTTTTAGGGGCACCA+TGG + chr1_3:49258840-49258859 None:intergenic 50.0%
TGGGTGAGGTGTGAGGAGTT+TGG + chr1_3:49255555-49255574 None:intergenic 55.0%
CATCCTCCGATCATCCATGG+CGG - chr1_3:49255610-49255629 Msa0122530:three_prime_UTR 55.0%
GTGATGCCGCCATGGATGAT+CGG + chr1_3:49255619-49255638 None:intergenic 55.0%
GATCATCCATGGCGGCATCA+CGG - chr1_3:49255618-49255637 Msa0122530:three_prime_UTR 55.0%
! TGTTGCCGGGTTGGGATTGA+AGG + chr1_3:49255655-49255674 None:intergenic 55.0%
GCAGATCTTGTTGCCGGGTT+GGG + chr1_3:49255663-49255682 None:intergenic 55.0%
TCGACGCAGATCTTGTTGCC+GGG + chr1_3:49255668-49255687 None:intergenic 55.0%
TAGGAGACTGATGCCCACTG+TGG + chr1_3:49255707-49255726 None:intergenic 55.0%
CAGTGGGCATCAGTCTCCTA+CGG - chr1_3:49255707-49255726 Msa0122530:three_prime_UTR 55.0%
GAATGCTCCGGAAAACACCG+TGG - chr1_3:49255746-49255765 Msa0122530:three_prime_UTR 55.0%
TCCGGAAAACACCGTGGTCT+CGG - chr1_3:49255752-49255771 Msa0122530:three_prime_UTR 55.0%
! ACCGAGACCACGGTGTTTTC+CGG + chr1_3:49255756-49255775 None:intergenic 55.0%
GATCCGTCACCATGGATGCT+TGG - chr1_3:49255795-49255814 Msa0122530:three_prime_UTR 55.0%
GGACCAAGCATCCATGGTGA+CGG + chr1_3:49255801-49255820 None:intergenic 55.0%
! CGGATTCAGGCTTTGTCGGA+AGG - chr1_3:49255953-49255972 Msa0122530:three_prime_UTR 55.0%
CCCAGCCGGAATCATTACTC+CGG + chr1_3:49256054-49256073 None:intergenic 55.0%
CCGGAGTAATGATTCCGGCT+GGG - chr1_3:49256051-49256070 Msa0122530:intron 55.0%
CCTATCCCAATCATCCCAGC+CGG + chr1_3:49256068-49256087 None:intergenic 55.0%
CGGCTGGGATGATTGGGATA+GGG - chr1_3:49256066-49256085 Msa0122530:intron 55.0%
TGGGATAGGGAAGGAGGTTC+GGG - chr1_3:49256079-49256098 Msa0122530:intron 55.0%
TGTGAGGAGTAAGTCGACGG+GGG - chr1_3:49256108-49256127 Msa0122530:intron 55.0%
GCAATTGGAAGCTTCTGCGG+CGG - chr1_3:49256201-49256220 Msa0122530:intron 55.0%
CAATTGGAAGCTTCTGCGGC+GGG - chr1_3:49256202-49256221 Msa0122530:intron 55.0%
GAGAATGAGTCAAGGCCGGA+AGG - chr1_3:49256256-49256275 Msa0122530:intron 55.0%
CTAGTCCGATGCCTTCACAG+AGG - chr1_3:49256320-49256339 Msa0122530:intron 55.0%
! TACCGGTGTCAGTGTTGTGC+CGG - chr1_3:49256487-49256506 Msa0122530:intron 55.0%
TGCCTCGTTGCTCAGAACAG+TGG - chr1_3:49257194-49257213 Msa0122530:CDS 55.0%
GTCCCAATCATCCCAAGAGC+TGG + chr1_3:49257931-49257950 None:intergenic 55.0%
TGGGGAGCTGATGCTTTAGC+TGG + chr1_3:49257978-49257997 None:intergenic 55.0%
TCAGATGACGCTTGGACAGG+GGG - chr1_3:49258104-49258123 Msa0122530:CDS 55.0%
ACAGGGGGTGGCTTTCTCTA+AGG - chr1_3:49258119-49258138 Msa0122530:CDS 55.0%
! CTCGAGACTGGTAATGCGGA+TGG + chr1_3:49258758-49258777 None:intergenic 55.0%
CAGACGTTGGGTGAGGTGTG+AGG + chr1_3:49255562-49255581 None:intergenic 60.0%
AGGGAGACAGACGTTGGGTG+AGG + chr1_3:49255569-49255588 None:intergenic 60.0%
ATGCCGCCATGGATGATCGG+AGG + chr1_3:49255616-49255635 None:intergenic 60.0%
! CGGGTTGGGATTGAAGGTCC+CGG + chr1_3:49255649-49255668 None:intergenic 60.0%
CGGGACCTTCAATCCCAACC+CGG - chr1_3:49255647-49255666 Msa0122530:three_prime_UTR 60.0%
CGCAGATCTTGTTGCCGGGT+TGG + chr1_3:49255664-49255683 None:intergenic 60.0%
!! CATGGTGACGGATCGGACGA+AGG + chr1_3:49255789-49255808 None:intergenic 60.0%
CTTCGTCCGATCCGTCACCA+TGG - chr1_3:49255787-49255806 Msa0122530:three_prime_UTR 60.0%
CTTTGTCGGAAGGTCGGTCG+TGG - chr1_3:49255963-49255982 Msa0122530:three_prime_UTR 60.0%
GCGTGATCCTCCGGTTGTGA+AGG - chr1_3:49255985-49256004 Msa0122530:three_prime_UTR 60.0%
TTCAAAGGGAAGGCCGCCGA+TGG - chr1_3:49256018-49256037 Msa0122530:intron 60.0%
TCAAAGGGAAGGCCGCCGAT+GGG - chr1_3:49256019-49256038 Msa0122530:intron 60.0%
GCCGGAGTAATGATTCCGGC+TGG - chr1_3:49256050-49256069 Msa0122530:intron 60.0%
CCGGCTGGGATGATTGGGAT+AGG - chr1_3:49256065-49256084 Msa0122530:intron 60.0%
GATAGGGAAGGAGGTTCGGG+TGG - chr1_3:49256082-49256101 Msa0122530:intron 60.0%
! GAGGTTCGGGTGGTGATGTG+AGG - chr1_3:49256092-49256111 Msa0122530:intron 60.0%
TTTGAACGGCGGTGGTGCAC+CGG - chr1_3:49256141-49256160 Msa0122530:intron 60.0%
AGCTTCTGCGGCGGGTAAAG+AGG - chr1_3:49256210-49256229 Msa0122530:intron 60.0%
GCTTCTGCGGCGGGTAAAGA+GGG - chr1_3:49256211-49256230 Msa0122530:intron 60.0%
GGCGGAGAATGAGTCAAGGC+CGG - chr1_3:49256252-49256271 Msa0122530:intron 60.0%
TGCGACGGTGGAAGTCCTTC+CGG + chr1_3:49256274-49256293 None:intergenic 60.0%
GAAGGACTTCCACCGTCGCA+AGG - chr1_3:49256274-49256293 Msa0122530:intron 60.0%
GACTTCCACCGTCGCAAGGT+GGG - chr1_3:49256278-49256297 Msa0122530:intron 60.0%
TACTTCCCACCTTGCGACGG+TGG + chr1_3:49256286-49256305 None:intergenic 60.0%
! ACCGGTGTCAGTGTTGTGCC+GGG - chr1_3:49256488-49256507 Msa0122530:intron 60.0%
ACCCGGCACAACACTGACAC+CGG + chr1_3:49256492-49256511 None:intergenic 60.0%
AGCATGCGCACACACACACC+CGG + chr1_3:49256509-49256528 None:intergenic 60.0%
!! ATGATGCTGGTTGGGCTGGC+TGG - chr1_3:49258003-49258022 Msa0122530:intron 60.0%
!! TGATGCTGGTTGGGCTGGCT+GGG - chr1_3:49258004-49258023 Msa0122530:intron 60.0%
CATCCATGGCGGCATCACGG+CGG - chr1_3:49255621-49255640 Msa0122530:three_prime_UTR 65.0%
TCGGTCGTGGCGTGATCCTC+CGG - chr1_3:49255976-49255995 Msa0122530:three_prime_UTR 65.0%
CAAAGGGAAGGCCGCCGATG+GGG - chr1_3:49256020-49256039 Msa0122530:intron 65.0%
ACCGGCGAGATCGAGGTCGA+CGG - chr1_3:49256159-49256178 Msa0122530:intron 65.0%
TCCGTCGACCTCGATCTCGC+CGG + chr1_3:49256163-49256182 None:intergenic 65.0%
GGACTTCCACCGTCGCAAGG+TGG - chr1_3:49256277-49256296 Msa0122530:intron 65.0%
GATGACGCTTGGACAGGGGG+TGG - chr1_3:49258107-49258126 Msa0122530:CDS 65.0%
CTCCGGCGACTCTGCCCCAT+CGG + chr1_3:49256037-49256056 None:intergenic 70.0%
! GTGGTGCACCGGCGAGATCG+AGG - chr1_3:49256152-49256171 Msa0122530:intron 70.0%
GGCGAGATCGAGGTCGACGG+AGG - chr1_3:49256162-49256181 Msa0122530:intron 70.0%
GAGCCGCCGTGATGCCGCCA+TGG + chr1_3:49255627-49255646 None:intergenic 75.0%
TGGCGGCATCACGGCGGCTC+CGG - chr1_3:49255627-49255646 Msa0122530:three_prime_UTR 75.0%
CGGCGACTCTGCCCCATCGG+CGG + chr1_3:49256034-49256053 None:intergenic 75.0%
CGCCGATGGGGCAGAGTCGC+CGG - chr1_3:49256032-49256051 Msa0122530:intron 75.0%
! GGCGGCATCACGGCGGCTCC+GGG - chr1_3:49255628-49255647 Msa0122530:three_prime_UTR 80.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 49255534 49259218 49255534 ID=Msa0122530;Name=Msa0122530
chr1_3 mRNA 49255534 49259218 49255534 ID=Msa0122530-mRNA-1;Parent=Msa0122530;Name=Msa0122530-mRNA-1;_AED=0.09;_eAED=0.09;_QI=92|1|1|1|0.66|0.5|4|472|481
chr1_3 exon 49255534 49256004 49255534 ID=Msa0122530-mRNA-1:exon:14903;Parent=Msa0122530-mRNA-1
chr1_3 exon 49256612 49257221 49256612 ID=Msa0122530-mRNA-1:exon:14902;Parent=Msa0122530-mRNA-1
chr1_3 exon 49258084 49258161 49258084 ID=Msa0122530-mRNA-1:exon:14901;Parent=Msa0122530-mRNA-1
chr1_3 exon 49258368 49259218 49258368 ID=Msa0122530-mRNA-1:exon:14900;Parent=Msa0122530-mRNA-1
chr1_3 five_prime_UTR 49259127 49259218 49259127 ID=Msa0122530-mRNA-1:five_prime_utr;Parent=Msa0122530-mRNA-1
chr1_3 CDS 49258368 49259126 49258368 ID=Msa0122530-mRNA-1:cds;Parent=Msa0122530-mRNA-1
chr1_3 CDS 49258084 49258161 49258084 ID=Msa0122530-mRNA-1:cds;Parent=Msa0122530-mRNA-1
chr1_3 CDS 49256613 49257221 49256613 ID=Msa0122530-mRNA-1:cds;Parent=Msa0122530-mRNA-1
chr1_3 three_prime_UTR 49256612 49256612 49256612 ID=Msa0122530-mRNA-1:three_prime_utr;Parent=Msa0122530-mRNA-1
chr1_3 three_prime_UTR 49255534 49256004 49255534 ID=Msa0122530-mRNA-1:three_prime_utr;Parent=Msa0122530-mRNA-1
Gene Sequence

>Msa0122530

ATGGCGGCATCACGGCGGCTCCGGGACCTTCAATCCCAACCCGGCAACAAGATCTGCGTCGATTGCTCTCAGAAGAATCCACAGTGGGCATCAGTCTCCTACGGCATCTTCATGTGCTTAGAATGCTCCGGAAAACACCGTGGTCTCGGTGTTCACATCTCCTTCGTCCGATCCGTCACCATGGATGCTTGGTCCGAAATCCAAATCAAAAAAATGGAAGCTGGTGGCAATGACAATCTCAACGCTTTCCTTGCCAAGTATTCTATTCCGAAGGAAACGGATATTGTTACCAAGTATAACACCAACGCTGCTTCAGTTTATCGTGATCGGATTCAGGCTTTGTCGGAAGGTCGGTCGTGGCGTGATCCTCCGGTTGTGAAGGAGAATTTAGGTTCAAAGGGAAGGCCGCCGATGGGGCAGAGTCGCCGGAGTAATGATTCCGGCTGGGATGATTGGGATAGGGAAGGAGGTTCGGGTGGTGATGTGAGGAGTAAGTCGACGGGGGATTTTAGGAATTTGAACGGCGGTGGTGCACCGGCGAGATCGAGGTCGACGGAGGATATTTATACGCGGTCGCAATTGGAAGCTTCTGCGGCGGGTAAAGAGGGATTTTTTGCGAAGAAGATGGCGGAGAATGAGTCAAGGCCGGAAGGACTTCCACCGTCGCAAGGTGGGAAGTATGTTGGGTTCGGATCTAGTCCGATGCCTTCACAGAGGAGCAATCCACAGCAAAATGATTATTTTTCTGTTGTTTCACAGGGGATTGGTAAGTTGTCATTGGTTGCTGCATCTGCTGCTAATGCTGTTCAGACTGGCACAAAAGAGATTACTTCTAAGGTCAAGGAAGGCGGTTATGATCAAAAGGTCAACGAAACTGTCACTGTTGTCACTCAAAAGACATCAGAGATTGGTCAAAGGACATGGGGTTTAATGAAGGGGGTCATGGCTTTGGCTTCACAGAAGGTTGAGGAGTACACGAAAGAAAACTCAAATTCGACTACTAATAACTGGCAACGAAATGAGAATGATAGAAATGGCTACTATCAGGATTTCAATCAAGGGAACAAAGGAGGTAATTCTTCTACTGGAAGAGAACAATCTTCATCAGGGCAATACAAAACTCAAAGCTCAAACTCTTGGGACGATTGGGGCCAAAAAGATAGTTGGAAGGGAGAACCTACTAATAAAGGATCAACTCCTTATTCATCTGGTGGGCAGTCTGGTACTCACAATCCCAGCTCTTGGGATGATTGGGACCACAAAGATTCTAGGAAGGAAGAACCAGCTAAAGCATCAGCTCCCCACAATAATGATGCTGGTTGGGCTGGCTGGGATAATGCAAAAGATGATGGATTTGATAACTTTTATGAAGGTTCATCTAATAAGAAAGCTGCTGGACATAATGGGAAATCAGATGACGCTTGGACAGGGGGTGGCTTTCTCTAA
Protein sequence

>Msa0122530

MAASRRLRDLQSQPGNKICVDCSQKNPQWASVSYGIFMCLECSGKHRGLGVHISFVRSVTMDAWSEIQIKKMEAGGNDNLNAFLAKYSIPKETDIVTKYNTNAASVYRDRIQALSEGRSWRDPPVVKENLGSKGRPPMGQSRRSNDSGWDDWDREGGSGGDVRSKSTGDFRNLNGGGAPARSRSTEDIYTRSQLEASAAGKEGFFAKKMAENESRPEGLPPSQGGKYVGFGSSPMPSQRSNPQQNDYFSVVSQGIGKLSLVAASAANAVQTGTKEITSKVKEGGYDQKVNETVTVVTQKTSEIGQRTWGLMKGVMALASQKVEEYTKENSNSTTNNWQRNENDRNGYYQDFNQGNKGGNSSTGREQSSSGQYKTQSSNSWDDWGQKDSWKGEPTNKGSTPYSSGGQSGTHNPSSWDDWDHKDSRKEEPAKASAPHNNDAGWAGWDNAKDDGFDNFYEGSSNKKAAGHNGKSDDAWTGGGFL*