Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0456070 | XP_039687201.1 | 98.297 | 411 | 7 | 0 | 1 | 411 | 1 | 411 | 0.0 | 821 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0456070 | sp|Q1EBV4|DDI1_ARATH | 77.644 | 416 | 85 | 3 | 1 | 411 | 1 | 413 | 0.0 | 640 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0456070 | A0A396ISK8 | 98.297 | 411 | 7 | 0 | 1 | 411 | 1 | 411 | 0.0 | 821 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0221140 | Msa0456070 | 0.803284 | 3.750941e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0456070 | MtrunA17_Chr3g0103101 | 98.297 | 411 | 7 | 0 | 1 | 411 | 1 | 411 | 0.0 | 821 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0456070 | AT3G13235.3 | 77.644 | 416 | 84 | 3 | 1 | 411 | 1 | 412 | 0.0 | 654 |
| Msa0456070 | AT3G13235.1 | 77.644 | 416 | 85 | 3 | 1 | 411 | 1 | 413 | 0.0 | 640 |
| Msa0456070 | AT3G13235.2 | 77.644 | 416 | 85 | 3 | 1 | 411 | 1 | 413 | 0.0 | 640 |
Find 94 sgRNAs with CRISPR-Local
Find 492 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAACTGATTGATTAATTTA+AGG | 0.132692 | 3_3:-49347977 | Msa0456070:three_prime_UTR |
| TGATGAACAAATTCTCAATT+TGG | 0.163536 | 3_3:-49355707 | Msa0456070:CDS |
| CCCAATATGGAGTTTCTCTT+TGG | 0.179556 | 3_3:-49350825 | Msa0456070:CDS |
| GTGCCGGCGCTGCTGCTTCT+AGG | 0.184463 | 3_3:-49355116 | Msa0456070:intron |
| TTTGATGGGTCAGCTCTTTC+AGG | 0.190068 | 3_3:-49353702 | Msa0456070:intron |
| TTTACAATTTGAAATGAAAT+TGG | 0.233087 | 3_3:+49348035 | None:intergenic |
| CCCTTGTTCTTTCTTAGTGC+TGG | 0.269077 | 3_3:-49350853 | Msa0456070:CDS |
| AGAATTTGTTGTTGCTGAAT+AGG | 0.289407 | 3_3:+49355231 | None:intergenic |
| AGTTGGCCAAACCGAAATAT+TGG | 0.313993 | 3_3:-49351138 | Msa0456070:CDS |
| GCATTCTTTCAGGTTGCATC+AGG | 0.314182 | 3_3:-49349644 | Msa0456070:intron |
| TCACAAGGAGGTGTTTCTTC+TGG | 0.316578 | 3_3:-49349608 | Msa0456070:intron |
| AAGACTGCGCTGAGCGTTTA+GGG | 0.317965 | 3_3:-49352318 | Msa0456070:intron |
| AAAGACTGCGCTGAGCGTTT+AGG | 0.319453 | 3_3:-49352319 | Msa0456070:CDS |
| TCCTGAGCTTGAAGCTTCCT+TGG | 0.324897 | 3_3:+49350307 | None:intergenic |
| ATGTATTCTACCCAATATTT+CGG | 0.327416 | 3_3:+49351127 | None:intergenic |
| AGAAAGGAATTGATGACAAT+TGG | 0.327419 | 3_3:-49352691 | Msa0456070:CDS |
| GACGCTGTAATTCACTTCTT+TGG | 0.337096 | 3_3:+49353361 | None:intergenic |
| CCAATATGGAGTTTCTCTTT+GGG | 0.339757 | 3_3:-49350824 | Msa0456070:CDS |
| TAGACGTGATTCTAATTTGA+TGG | 0.344375 | 3_3:-49353717 | Msa0456070:CDS |
| ACCACTCTTGCAAAAGCTTC+AGG | 0.344900 | 3_3:+49352647 | None:intergenic |
| CCCAAAGAGAAACTCCATAT+TGG | 0.345856 | 3_3:+49350824 | None:intergenic |
| AGAGTTAGCACAAACTATTC+TGG | 0.364021 | 3_3:-49353430 | Msa0456070:CDS |
| CAGTGATCTTCATGTTGAAT+TGG | 0.375666 | 3_3:+49355740 | None:intergenic |
| TTTCAGGCATTTGTTGATAG+TGG | 0.390062 | 3_3:-49352364 | Msa0456070:intron |
| GACGCAGTCGTAAAATTTCC+TGG | 0.390464 | 3_3:+49353388 | None:intergenic |
| AGCTTCTGGTGACAAGTCTA+AGG | 0.395209 | 3_3:-49349244 | Msa0456070:intron |
| GAGTGGCCACTTACCTTCAA+TGG | 0.402366 | 3_3:+49352505 | None:intergenic |
| TATGTTGACATGGAGGTTAA+TGG | 0.402989 | 3_3:-49352532 | Msa0456070:CDS |
| ACTCTTATATTACTTGTTGA+AGG | 0.403807 | 3_3:+49355858 | None:intergenic |
| AGTGCTGGATTCTCCCAATA+TGG | 0.404170 | 3_3:-49350838 | Msa0456070:CDS |
| CAACAACAAATTCTGTTCAA+TGG | 0.412584 | 3_3:-49355222 | Msa0456070:CDS |
| ACCGTCTCTGGCGCTGGTGC+CGG | 0.413690 | 3_3:-49355132 | Msa0456070:CDS |
| AACAACAAATTCTGTTCAAT+GGG | 0.414137 | 3_3:-49355221 | Msa0456070:CDS |
| ATATTACTTGTTGAAGGGGT+TGG | 0.415633 | 3_3:+49355864 | None:intergenic |
| CCAAAGAGAAACTCCATATT+GGG | 0.417313 | 3_3:+49350825 | None:intergenic |
| TTCTACCCAATATTTCGGTT+TGG | 0.425210 | 3_3:+49351132 | None:intergenic |
| ATTGAGTGCACTTGGTGTTA+AGG | 0.436866 | 3_3:-49355175 | Msa0456070:CDS |
| ATGGTAAAGTGAAAGACTAT+TGG | 0.438725 | 3_3:+49355813 | None:intergenic |
| GACTGTAAATATCATCAATC+AGG | 0.441717 | 3_3:+49347998 | None:intergenic |
| ATGATTACATACAGATTCGT+TGG | 0.450994 | 3_3:+49355675 | None:intergenic |
| TTGCTAATGATGACCGTCTC+TGG | 0.454720 | 3_3:-49355144 | Msa0456070:CDS |
| CAAGCTCTTCAATTATTCAA+TGG | 0.456598 | 3_3:-49348163 | Msa0456070:CDS |
| GAAAGGAATTGATGACAATT+GGG | 0.457835 | 3_3:-49352690 | Msa0456070:CDS |
| GTTGGCCAAACCGAAATATT+GGG | 0.457997 | 3_3:-49351137 | Msa0456070:CDS |
| AGTATTGAAGCTCAAATCAT+TGG | 0.461455 | 3_3:+49353781 | None:intergenic |
| AGAATAGTTTGTGCTAACTC+TGG | 0.463114 | 3_3:+49353432 | None:intergenic |
| GGATATGCTCCGAAAGCATC+AGG | 0.463855 | 3_3:-49350799 | Msa0456070:intron |
| GGCAATGAGGAACAAGCAGC+TGG | 0.464855 | 3_3:-49348142 | Msa0456070:CDS |
| GAGTTAGCACAAACTATTCT+GGG | 0.466554 | 3_3:-49353429 | Msa0456070:CDS |
| TATGGAGTTTCTCTTTGGGC+TGG | 0.472293 | 3_3:-49350820 | Msa0456070:CDS |
| CTCTTATATTACTTGTTGAA+GGG | 0.474896 | 3_3:+49355859 | None:intergenic |
| GTTATAGGTGGAAAACGTTA+AGG | 0.478956 | 3_3:-49355582 | Msa0456070:intron |
| TCCAAGGAAGCTTCAAGCTC+AGG | 0.480693 | 3_3:-49350308 | Msa0456070:CDS |
| AAGTGCTGCTGAAAAGCAGC+AGG | 0.481742 | 3_3:+49353740 | None:intergenic |
| TAAGGCATTACTTGAGGTTG+AGG | 0.483758 | 3_3:-49355564 | Msa0456070:intron |
| GATTTGAGCTTCAATACTGA+TGG | 0.491036 | 3_3:-49353776 | Msa0456070:CDS |
| GTTGCAAAGCTTGTTGAGCT+AGG | 0.494961 | 3_3:-49348208 | Msa0456070:CDS |
| AGGATGGTACCTGATGCTTT+CGG | 0.499216 | 3_3:+49350790 | None:intergenic |
| AGACGTGATTCTAATTTGAT+GGG | 0.503423 | 3_3:-49353716 | Msa0456070:CDS |
| CTATTGGAAGACTTATAAGA+AGG | 0.504019 | 3_3:+49355829 | None:intergenic |
| GTTGAAGAACAAGAAGAGAG+AGG | 0.505328 | 3_3:+49355778 | None:intergenic |
| GGTTAATGGTGTACCATTGA+AGG | 0.512062 | 3_3:-49352518 | Msa0456070:intron |
| TGATTACATACAGATTCGTT+GGG | 0.512819 | 3_3:+49355676 | None:intergenic |
| AGTGATCTTCATGTTGAATT+GGG | 0.515013 | 3_3:+49355741 | None:intergenic |
| AGATCAGCGTTACAAAGGAA+TGG | 0.515416 | 3_3:-49351168 | Msa0456070:CDS |
| TCTTATATTACTTGTTGAAG+GGG | 0.523717 | 3_3:+49355860 | None:intergenic |
| AAAGTATACTTACTCGAAGT+GGG | 0.528721 | 3_3:+49350282 | None:intergenic |
| TAATGATCTCAATAAAATCC+AGG | 0.530386 | 3_3:-49353406 | Msa0456070:CDS |
| CGTTACAAAGGAATGGCTCA+TGG | 0.532626 | 3_3:-49351161 | Msa0456070:CDS |
| ATGATGACCGTCTCTGGCGC+TGG | 0.534296 | 3_3:-49355138 | Msa0456070:CDS |
| AAAGGAATGGCTCATGGAGT+TGG | 0.535658 | 3_3:-49351155 | Msa0456070:CDS |
| TCTCAGAAATTGAGTGCACT+TGG | 0.541253 | 3_3:-49355183 | Msa0456070:CDS |
| TAAAGTATACTTACTCGAAG+TGG | 0.542265 | 3_3:+49350281 | None:intergenic |
| AATACATGTAGCTCCAATCA+AGG | 0.544227 | 3_3:-49351111 | Msa0456070:intron |
| CATTCTTTCAGGTTGCATCA+GGG | 0.544398 | 3_3:-49349643 | Msa0456070:intron |
| GATTGAAGCTGCCATCCGCC+AGG | 0.546391 | 3_3:-49353129 | Msa0456070:intron |
| GAATAGTTTGTGCTAACTCT+GGG | 0.555721 | 3_3:+49353433 | None:intergenic |
| AAACGTTAAGGCATTACTTG+AGG | 0.564264 | 3_3:-49355570 | Msa0456070:CDS |
| TCAATTATTCAATGGCAATG+AGG | 0.566069 | 3_3:-49348155 | Msa0456070:CDS |
| TGAGCTAGGATTTGAAAGAC+AGG | 0.567797 | 3_3:-49348194 | Msa0456070:CDS |
| AGAGAGGTTTGCTTTATCGA+TGG | 0.573022 | 3_3:+49355794 | None:intergenic |
| GCCGGCACCAGCGCCAGAGA+CGG | 0.575571 | 3_3:+49355131 | None:intergenic |
| AGACGAGGCAAAGTATTCCA+AGG | 0.576299 | 3_3:-49350324 | Msa0456070:CDS |
| TCCAGCACTAAGAAAGAACA+AGG | 0.576767 | 3_3:+49350852 | None:intergenic |
| ATACCTAGAAGCAGCAGCGC+CGG | 0.584021 | 3_3:+49355113 | None:intergenic |
| GAAGAAACACCTCCTTGTGA+TGG | 0.586688 | 3_3:+49349611 | None:intergenic |
| GCAATGAGGAACAAGCAGCT+GGG | 0.631351 | 3_3:-49348141 | Msa0456070:CDS |
| GGTCATGTTGTATGTTGACA+TGG | 0.635512 | 3_3:-49352542 | Msa0456070:CDS |
| CAGAGAAAGACATACCATCC+CGG | 0.647041 | 3_3:-49350352 | Msa0456070:CDS |
| GGGAGCAATAATCCATCACA+AGG | 0.662961 | 3_3:-49349623 | Msa0456070:CDS |
| AGTGCTGCTGAAAAGCAGCA+GGG | 0.682279 | 3_3:+49353741 | None:intergenic |
| CATGTTGTATGTTGACATGG+AGG | 0.717946 | 3_3:-49352539 | Msa0456070:CDS |
| AGCAATAATCCATCACAAGG+AGG | 0.720941 | 3_3:-49349620 | Msa0456070:CDS |
| CCAGCACTAAGAAAGAACAA+GGG | 0.762400 | 3_3:+49350853 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAATGTTTATAATATAATA+AGG | + | chr3_3:49349123-49349142 | None:intergenic | 10.0% |
| !! | ATAATATTATTACGTTTATT+AGG | - | chr3_3:49351588-49351607 | Msa0456070:intron | 10.0% |
| !!! | ATGTTTAAAAACTTTAAAAT+TGG | + | chr3_3:49352263-49352282 | None:intergenic | 10.0% |
| !!! | TAAAATTTTGAATTATTATG+AGG | + | chr3_3:49352304-49352323 | None:intergenic | 10.0% |
| !! | CAAAAACAAATTTAATTATA+TGG | + | chr3_3:49354486-49354505 | None:intergenic | 10.0% |
| !! | AAAAAAATATAATAAATCCT+TGG | + | chr3_3:49355013-49355032 | None:intergenic | 10.0% |
| !!! | AAGGATTTATTATATTTTTT+TGG | - | chr3_3:49355012-49355031 | Msa0456070:intron | 10.0% |
| !!! | TCGAAAAATTGAATTTTTAT+AGG | + | chr3_3:49348328-49348347 | None:intergenic | 15.0% |
| !!! | GATTATCTTTTTGATTATAT+TGG | - | chr3_3:49348442-49348461 | Msa0456070:intron | 15.0% |
| !! | TAAGAAATTGCAAAAAATTT+GGG | + | chr3_3:49349266-49349285 | None:intergenic | 15.0% |
| !! | ATAAGAAATTGCAAAAAATT+TGG | + | chr3_3:49349267-49349286 | None:intergenic | 15.0% |
| !! | AAATTTGCAATACATTTATA+GGG | + | chr3_3:49349380-49349399 | None:intergenic | 15.0% |
| !! | AAAATTTGCAATACATTTAT+AGG | + | chr3_3:49349381-49349400 | None:intergenic | 15.0% |
| !! | TGATTAAACTATCATAAAAA+AGG | + | chr3_3:49349593-49349612 | None:intergenic | 15.0% |
| !! | TGATTAAACTATCATAAAAA+AGG | + | chr3_3:49349593-49349612 | None:intergenic | 15.0% |
| !! | AATTGGATGTAATTTATATA+GGG | - | chr3_3:49349717-49349736 | Msa0456070:intron | 15.0% |
| !! | GTTTATTTATATTACATGAA+TGG | + | chr3_3:49349905-49349924 | None:intergenic | 15.0% |
| !! | TGTATGTTTCATTATAAATT+GGG | + | chr3_3:49350371-49350390 | None:intergenic | 15.0% |
| !! | AAAATTCAAACAAATTTATG+AGG | + | chr3_3:49350631-49350650 | None:intergenic | 15.0% |
| !! | ACTAGAAAAATAAAAGATAT+TGG | - | chr3_3:49351750-49351769 | Msa0456070:intron | 15.0% |
| !!! | TATTGATTTTAAGAGAAAAA+TGG | - | chr3_3:49352364-49352383 | Msa0456070:intron | 15.0% |
| !!! | GCTAATAGATTTAATTTATT+TGG | - | chr3_3:49352841-49352860 | Msa0456070:intron | 15.0% |
| !!! | TTTTGCATATTTTTATATCA+TGG | - | chr3_3:49353754-49353773 | Msa0456070:CDS | 15.0% |
| !! | AATTCAGTAAAAGAAAATTA+GGG | + | chr3_3:49353818-49353837 | None:intergenic | 15.0% |
| !! | AAATTCAGTAAAAGAAAATT+AGG | + | chr3_3:49353819-49353838 | None:intergenic | 15.0% |
| !!! | AAAATATGAAATTTTCACAT+AGG | + | chr3_3:49354512-49354531 | None:intergenic | 15.0% |
| !!! | TTATTGTTTACTTATTTTTC+AGG | - | chr3_3:49354563-49354582 | Msa0456070:intron | 15.0% |
| !! | ATGAGATAATAAAAATAAGA+TGG | + | chr3_3:49355350-49355369 | None:intergenic | 15.0% |
| !!! | TTTACAATTTGAAATGAAAT+TGG | + | chr3_3:49355798-49355817 | None:intergenic | 15.0% |
| !!! | TTTTATGTTGTTTGAAATTG+TGG | - | chr3_3:49348372-49348391 | Msa0456070:intron | 20.0% |
| !!! | TTTATGTTGTTTGAAATTGT+GGG | - | chr3_3:49348373-49348392 | Msa0456070:intron | 20.0% |
| !! | TCATATGGAATTAAATTTCT+AGG | + | chr3_3:49348422-49348441 | None:intergenic | 20.0% |
| !! | ATCAAAAAGATAATCTCATA+TGG | + | chr3_3:49348437-49348456 | None:intergenic | 20.0% |
| !!! | TATCTTTTTGATTATATTGG+TGG | - | chr3_3:49348445-49348464 | Msa0456070:intron | 20.0% |
| !!! | AATAAGTTGAAAACAACTTA+CGG | + | chr3_3:49349003-49349022 | None:intergenic | 20.0% |
| !! | TTAAGTTATTTATCCAAACT+AGG | - | chr3_3:49349158-49349177 | Msa0456070:intron | 20.0% |
| !! | GAATTGGATGTAATTTATAT+AGG | - | chr3_3:49349716-49349735 | Msa0456070:intron | 20.0% |
| !!! | TAGTACTTTTGCAATTAAAT+TGG | - | chr3_3:49349772-49349791 | Msa0456070:intron | 20.0% |
| !! | ATTTATATTACATGAATGGT+AGG | + | chr3_3:49349901-49349920 | None:intergenic | 20.0% |
| !! | GTTTATTTATATTACATGGA+TGG | + | chr3_3:49349988-49350007 | None:intergenic | 20.0% |
| !! | TCACGTTTATTTATATTACA+TGG | + | chr3_3:49349909-49349928 | None:intergenic | 20.0% |
| !! | GTGAATTTAAATTATTTCAG+CGG | - | chr3_3:49350021-49350040 | Msa0456070:intron | 20.0% |
| !! | CTGTATGTTTCATTATAAAT+TGG | + | chr3_3:49350372-49350391 | None:intergenic | 20.0% |
| !!! | AATTTGTTTGAATTTTTTGC+AGG | - | chr3_3:49350635-49350654 | Msa0456070:intron | 20.0% |
| !!! | ACATAACAGTTTTAAGTATT+TGG | - | chr3_3:49350750-49350769 | Msa0456070:intron | 20.0% |
| !! | CTACTTAACTGAATATTAAT+CGG | + | chr3_3:49350929-49350948 | None:intergenic | 20.0% |
| !!! | GTTTGTTTGTCATAATTTTT+TGG | - | chr3_3:49350955-49350974 | Msa0456070:intron | 20.0% |
| !! | AGTAAAACAAACATAATTGA+TGG | + | chr3_3:49351090-49351109 | None:intergenic | 20.0% |
| !!! | TTTTGTATTTTAGTGCTAAT+AGG | - | chr3_3:49351223-49351242 | Msa0456070:intron | 20.0% |
| !! | TTCACAAAAAGAACATAATA+CGG | + | chr3_3:49351700-49351719 | None:intergenic | 20.0% |
| !! | AGAAAAATAAAAGATATTGG+AGG | - | chr3_3:49351753-49351772 | Msa0456070:intron | 20.0% |
| !!! | TTTAATAGAGAAAGTTTTGA+AGG | - | chr3_3:49352226-49352245 | Msa0456070:intron | 20.0% |
| !!! | TTAATAGAGAAAGTTTTGAA+GGG | - | chr3_3:49352227-49352246 | Msa0456070:intron | 20.0% |
| !! | TGTTAAAAAATTACCTTGAT+TGG | + | chr3_3:49352735-49352754 | None:intergenic | 20.0% |
| !! | AAAAAATATAAGCAAGAGAA+TGG | + | chr3_3:49352883-49352902 | None:intergenic | 20.0% |
| !!! | CTTTAATCTGATTCATTTTA+TGG | - | chr3_3:49353614-49353633 | Msa0456070:intron | 20.0% |
| !!! | AGATATGTTTTGTATCATAT+AGG | - | chr3_3:49353677-49353696 | Msa0456070:intron | 20.0% |
| !!! | AAAATATTTTAACTGGCTAT+GGG | + | chr3_3:49353718-49353737 | None:intergenic | 20.0% |
| !!! | AAAAATATTTTAACTGGCTA+TGG | + | chr3_3:49353719-49353738 | None:intergenic | 20.0% |
| !!! | AAAGGCAAAAATATTTTAAC+TGG | + | chr3_3:49353725-49353744 | None:intergenic | 20.0% |
| !!! | GTTAAAATATTTTTGCCTTT+AGG | - | chr3_3:49353725-49353744 | Msa0456070:CDS | 20.0% |
| !! | AGAATACTCAAAATAAACTT+AGG | + | chr3_3:49353788-49353807 | None:intergenic | 20.0% |
| !!! | TTTCTTTTACTGAATTTGAA+AGG | - | chr3_3:49353822-49353841 | Msa0456070:intron | 20.0% |
| !!! | TTTTAAAAGAAAGACAGTTA+TGG | - | chr3_3:49354100-49354119 | Msa0456070:intron | 20.0% |
| !! | TTTGATGAAAAGAATGATAA+CGG | - | chr3_3:49354152-49354171 | Msa0456070:intron | 20.0% |
| !!! | CTAATAATAATGACTTTTTC+CGG | - | chr3_3:49354399-49354418 | Msa0456070:intron | 20.0% |
| !!! | TAATAATAATGACTTTTTCC+GGG | - | chr3_3:49354400-49354419 | Msa0456070:intron | 20.0% |
| !! | AAACAGTTCTTGATATTTAA+CGG | + | chr3_3:49354616-49354635 | None:intergenic | 20.0% |
| !! | TTAACAACTAAAATCTTCAA+AGG | + | chr3_3:49354713-49354732 | None:intergenic | 20.0% |
| !!! | ACTTTTAGAAAACTAATTCT+TGG | - | chr3_3:49354799-49354818 | Msa0456070:intron | 20.0% |
| !!! | AATATTATCGCATTAGTTTT+TGG | + | chr3_3:49354840-49354859 | None:intergenic | 20.0% |
| !! | TCAAATATCTATATTGCAAA+AGG | - | chr3_3:49354923-49354942 | Msa0456070:intron | 20.0% |
| !! | CAAATATCTATATTGCAAAA+GGG | - | chr3_3:49354924-49354943 | Msa0456070:intron | 20.0% |
| !! | AAATATCTATATTGCAAAAG+GGG | - | chr3_3:49354925-49354944 | Msa0456070:intron | 20.0% |
| !!! | AATCAATGATTTGATTTTGA+AGG | - | chr3_3:49355549-49355568 | Msa0456070:intron | 20.0% |
| !! | TCAACTGATTGATTAATTTA+AGG | - | chr3_3:49355853-49355872 | Msa0456070:five_prime_UTR | 20.0% |
| !! | TCTTATATTACTTGTTGAAG+GGG | + | chr3_3:49347973-49347992 | None:intergenic | 25.0% |
| !! | CTCTTATATTACTTGTTGAA+GGG | + | chr3_3:49347974-49347993 | None:intergenic | 25.0% |
| !! | ACTCTTATATTACTTGTTGA+AGG | + | chr3_3:49347975-49347994 | None:intergenic | 25.0% |
| ! | TGATGAACAAATTCTCAATT+TGG | - | chr3_3:49348123-49348142 | Msa0456070:exon | 25.0% |
| ! | TTTATAGGAAAAAACGAGAT+GGG | + | chr3_3:49348313-49348332 | None:intergenic | 25.0% |
| !! | TTTTATAGGAAAAAACGAGA+TGG | + | chr3_3:49348314-49348333 | None:intergenic | 25.0% |
| !!! | TCTCATATGGTTTTAATTTG+TGG | - | chr3_3:49348518-49348537 | Msa0456070:intron | 25.0% |
| !!! | ATATGGTTTTAATTTGTGGT+TGG | - | chr3_3:49348522-49348541 | Msa0456070:intron | 25.0% |
| ! | AACAACAAATTCTGTTCAAT+GGG | - | chr3_3:49348609-49348628 | Msa0456070:intron | 25.0% |
| ! | ACAACATAACATCAATGAAA+AGG | + | chr3_3:49348744-49348763 | None:intergenic | 25.0% |
| ! | TTGCTTACTATTCTCAAATT+AGG | - | chr3_3:49348782-49348801 | Msa0456070:intron | 25.0% |
| ! | TAAAATAACTCGATCTAAAC+GGG | + | chr3_3:49348912-49348931 | None:intergenic | 25.0% |
| ! | CTAAAATAACTCGATCTAAA+CGG | + | chr3_3:49348913-49348932 | None:intergenic | 25.0% |
| ! | GTTTGTATAAGAAATTCAAG+GGG | + | chr3_3:49349296-49349315 | None:intergenic | 25.0% |
| ! | GGTTTGTATAAGAAATTCAA+GGG | + | chr3_3:49349297-49349316 | None:intergenic | 25.0% |
| ! | TTATACAAACCCCTATAAAT+TGG | - | chr3_3:49349306-49349325 | Msa0456070:intron | 25.0% |
| ! | TATACAAACCCCTATAAATT+GGG | - | chr3_3:49349307-49349326 | Msa0456070:intron | 25.0% |
| ! | AAGAAATTGCCCAATTTATA+GGG | + | chr3_3:49349319-49349338 | None:intergenic | 25.0% |
| ! | AAAGAAATTGCCCAATTTAT+AGG | + | chr3_3:49349320-49349339 | None:intergenic | 25.0% |
| ! | TCATAAAAAAGGACTGAATA+GGG | + | chr3_3:49349582-49349601 | None:intergenic | 25.0% |
| ! | ATCATAAAAAAGGACTGAAT+AGG | + | chr3_3:49349583-49349602 | None:intergenic | 25.0% |
| ! | AAACTATCATAAAAAAGGAC+TGG | + | chr3_3:49349588-49349607 | None:intergenic | 25.0% |
| ! | TTACATCCAATTCAGTTATA+TGG | + | chr3_3:49349709-49349728 | None:intergenic | 25.0% |
| !!! | TTAATTGCAAAAGTACTACT+TGG | + | chr3_3:49349770-49349789 | None:intergenic | 25.0% |
| ! | TTGCAATTAAATTGGAAGTT+TGG | - | chr3_3:49349780-49349799 | Msa0456070:intron | 25.0% |
| ! | TGATAATTCCATATTTCAAG+TGG | + | chr3_3:49349823-49349842 | None:intergenic | 25.0% |
| ! | TAAATAAACGTGATGAATTG+TGG | - | chr3_3:49349916-49349935 | Msa0456070:intron | 25.0% |
| ! | ATTTATATTACATGGATGGT+AGG | + | chr3_3:49349984-49350003 | None:intergenic | 25.0% |
| ! | TAAATAAACGTGATGAATTG+TGG | - | chr3_3:49349916-49349935 | Msa0456070:intron | 25.0% |
| !!! | TTGTTATTTGGTTTTGGTAT+TGG | - | chr3_3:49350334-49350353 | Msa0456070:CDS | 25.0% |
| ! | TAATGATCTCAATAAAATCC+AGG | - | chr3_3:49350424-49350443 | Msa0456070:intron | 25.0% |
| ! | AAACTGAACAAAAAATTACC+TGG | + | chr3_3:49350722-49350741 | None:intergenic | 25.0% |
| ! | CGATTAATATTCAGTTAAGT+AGG | - | chr3_3:49350927-49350946 | Msa0456070:intron | 25.0% |
| !! | TTTCTTAAGTTTCTCTGAAA+AGG | + | chr3_3:49350997-49351016 | None:intergenic | 25.0% |
| !!! | GTTTGTTTTACTGTGAATAA+CGG | - | chr3_3:49351098-49351117 | Msa0456070:intron | 25.0% |
| ! | AATCTTATAGATAGATGTCA+TGG | + | chr3_3:49351568-49351587 | None:intergenic | 25.0% |
| ! | CATGTAAAGAATATGAGATA+TGG | - | chr3_3:49351776-49351795 | Msa0456070:intron | 25.0% |
| ! | TTATGCAATCAAAATGACTT+AGG | - | chr3_3:49351834-49351853 | Msa0456070:intron | 25.0% |
| ! | TATGCAATCAAAATGACTTA+GGG | - | chr3_3:49351835-49351854 | Msa0456070:intron | 25.0% |
| !! | CTAGTTTATGTATACCTTTT+GGG | - | chr3_3:49351957-49351976 | Msa0456070:intron | 25.0% |
| ! | AACACTATTATGTGGAAATA+TGG | + | chr3_3:49352569-49352588 | None:intergenic | 25.0% |
| !! | AGAATGTAGAATGATTTTGA+TGG | - | chr3_3:49352608-49352627 | Msa0456070:intron | 25.0% |
| ! | ATGTATTCTACCCAATATTT+CGG | + | chr3_3:49352706-49352725 | None:intergenic | 25.0% |
| !!! | TAATTTTTTAACAGATCTCG+TGG | - | chr3_3:49352742-49352761 | Msa0456070:intron | 25.0% |
| !! | GATATCTAAGATTGTAACTA+AGG | + | chr3_3:49353063-49353082 | None:intergenic | 25.0% |
| ! | AAGTATATAACAAATCGACA+AGG | + | chr3_3:49353438-49353457 | None:intergenic | 25.0% |
| ! | ACTCAAAATAAACTTAGGTT+AGG | + | chr3_3:49353783-49353802 | None:intergenic | 25.0% |
| ! | TTTGATCTAAATAGTGTATC+AGG | - | chr3_3:49353991-49354010 | Msa0456070:intron | 25.0% |
| ! | TTTGTATTTGTCCTATTTAG+AGG | - | chr3_3:49354330-49354349 | Msa0456070:intron | 25.0% |
| ! | CGGAAAAAGTCATTATTATT+AGG | + | chr3_3:49354401-49354420 | None:intergenic | 25.0% |
| ! | TTATTATTGCAGTGTAAATG+AGG | - | chr3_3:49354439-49354458 | Msa0456070:intron | 25.0% |
| ! | TATTATTGCAGTGTAAATGA+GGG | - | chr3_3:49354440-49354459 | Msa0456070:intron | 25.0% |
| !! | TATGATAAAGCACTAATCTT+TGG | + | chr3_3:49354684-49354703 | None:intergenic | 25.0% |
| ! | GTAAGTTTAGCAGTAAAATA+AGG | + | chr3_3:49354967-49354986 | None:intergenic | 25.0% |
| ! | CAAAAACCAAGGATTTATTT+GGG | - | chr3_3:49355037-49355056 | Msa0456070:intron | 25.0% |
| ! | AAACACAAATGAATAGTGTT+TGG | - | chr3_3:49355113-49355132 | Msa0456070:intron | 25.0% |
| ! | AAGCATAAATGAATAGTGTT+TGG | + | chr3_3:49355232-49355251 | None:intergenic | 25.0% |
| ! | ATAAGATGGAAAACAACTTT+GGG | + | chr3_3:49355336-49355355 | None:intergenic | 25.0% |
| ! | AATAAGATGGAAAACAACTT+TGG | + | chr3_3:49355337-49355356 | None:intergenic | 25.0% |
| ! | AATTATGACAATGAGATATC+TGG | + | chr3_3:49355373-49355392 | None:intergenic | 25.0% |
| ! | AAAAAAACAGTCACATTTCT+AGG | + | chr3_3:49355523-49355542 | None:intergenic | 25.0% |
| CTATTGGAAGACTTATAAGA+AGG | + | chr3_3:49348004-49348023 | None:intergenic | 30.0% | |
| ATGGTAAAGTGAAAGACTAT+TGG | + | chr3_3:49348020-49348039 | None:intergenic | 30.0% | |
| AGTGATCTTCATGTTGAATT+GGG | + | chr3_3:49348092-49348111 | None:intergenic | 30.0% | |
| TGATTACATACAGATTCGTT+GGG | + | chr3_3:49348157-49348176 | None:intergenic | 30.0% | |
| ATGATTACATACAGATTCGT+TGG | + | chr3_3:49348158-49348177 | None:intergenic | 30.0% | |
| ! | TCAACCCTTTTATGTGTTAT+AGG | - | chr3_3:49348233-49348252 | Msa0456070:intron | 30.0% |
| TCCACCTATAACACATAAAA+GGG | + | chr3_3:49348240-49348259 | None:intergenic | 30.0% | |
| TTCCACCTATAACACATAAA+AGG | + | chr3_3:49348241-49348260 | None:intergenic | 30.0% | |
| AAGTGATGTTGAATCTCATA+TGG | - | chr3_3:49348505-49348524 | Msa0456070:intron | 30.0% | |
| !! | AGAATTTGTTGTTGCTGAAT+AGG | + | chr3_3:49348602-49348621 | None:intergenic | 30.0% |
| CAACAACAAATTCTGTTCAA+TGG | - | chr3_3:49348608-49348627 | Msa0456070:intron | 30.0% | |
| TGTTAAGTTTGATCTAACCT+TGG | - | chr3_3:49348877-49348896 | Msa0456070:intron | 30.0% | |
| GTTAAGTTTGATCTAACCTT+GGG | - | chr3_3:49348878-49348897 | Msa0456070:intron | 30.0% | |
| !!! | AGTTATTTTAGTCTATCCAC+TGG | - | chr3_3:49348922-49348941 | Msa0456070:intron | 30.0% |
| AAATTGCAAAAAATTTGGGC+CGG | + | chr3_3:49349262-49349281 | None:intergenic | 30.0% | |
| GGGTTTGTATAAGAAATTCA+AGG | + | chr3_3:49349298-49349317 | None:intergenic | 30.0% | |
| AGAAATTGCCCAATTTATAG+GGG | + | chr3_3:49349318-49349337 | None:intergenic | 30.0% | |
| !!! | TATTGCAAATTTTTTTCGCC+CGG | - | chr3_3:49349388-49349407 | Msa0456070:intron | 30.0% |
| ACAGGATCATAGTTAAATCA+CGG | + | chr3_3:49349489-49349508 | None:intergenic | 30.0% | |
| TCATAAAAAAGGACTGGATA+GGG | + | chr3_3:49349621-49349640 | None:intergenic | 30.0% | |
| ATCATAAAAAAGGACTGGAT+AGG | + | chr3_3:49349622-49349641 | None:intergenic | 30.0% | |
| ! | AGTATTGAAGCTCAAATCAT+TGG | + | chr3_3:49350052-49350071 | None:intergenic | 30.0% |
| TAGACGTGATTCTAATTTGA+TGG | - | chr3_3:49350113-49350132 | Msa0456070:intron | 30.0% | |
| AGACGTGATTCTAATTTGAT+GGG | - | chr3_3:49350114-49350133 | Msa0456070:intron | 30.0% | |
| !! | TTCAATGCTTGCTTGTTATT+TGG | - | chr3_3:49350322-49350341 | Msa0456070:CDS | 30.0% |
| CAGAATAATGAAAATGCACA+AGG | + | chr3_3:49350596-49350615 | None:intergenic | 30.0% | |
| ! | TTTTGTGCTTCAACATCAAA+AGG | + | chr3_3:49350678-49350697 | None:intergenic | 30.0% |
| ! | ATTCTGTCTAAAGTAACATC+TGG | - | chr3_3:49350783-49350802 | Msa0456070:intron | 30.0% |
| TGCTCTTCATTTCATTAGAA+TGG | + | chr3_3:49350809-49350828 | None:intergenic | 30.0% | |
| TTGGTTACATGAAACAAGTA+TGG | + | chr3_3:49351031-49351050 | None:intergenic | 30.0% | |
| ! | TAATTGATGGTTATGAACAG+TGG | + | chr3_3:49351077-49351096 | None:intergenic | 30.0% |
| TTTCAACTAACCATACAGAA+AGG | - | chr3_3:49351123-49351142 | Msa0456070:CDS | 30.0% | |
| ! | AGAAAGGAATTGATGACAAT+TGG | - | chr3_3:49351139-49351158 | Msa0456070:CDS | 30.0% |
| ! | GAAAGGAATTGATGACAATT+GGG | - | chr3_3:49351140-49351159 | Msa0456070:CDS | 30.0% |
| AATCCAAGCTGTAATATTTC+AGG | - | chr3_3:49351267-49351286 | Msa0456070:intron | 30.0% | |
| !!! | AAGAAGAATGCTATTTTGAG+TGG | + | chr3_3:49351345-49351364 | None:intergenic | 30.0% |
| AAAACTTTCTGTCATTGAAG+AGG | + | chr3_3:49351409-49351428 | None:intergenic | 30.0% | |
| ! | TTCAATGACAGAAAGTTTTG+TGG | - | chr3_3:49351410-49351429 | Msa0456070:intron | 30.0% |
| !! | ATGGATTTTCACTTTGTTTC+AGG | - | chr3_3:49351450-49351469 | Msa0456070:intron | 30.0% |
| ATGTACTAGTGCAAATTCAA+GGG | + | chr3_3:49351629-49351648 | None:intergenic | 30.0% | |
| TATGTACTAGTGCAAATTCA+AGG | + | chr3_3:49351630-49351649 | None:intergenic | 30.0% | |
| TAAAACAGATAGTTCAGAGA+AGG | - | chr3_3:49351727-49351746 | Msa0456070:intron | 30.0% | |
| ATTTGGCAGATACACATTAA+AGG | - | chr3_3:49351917-49351936 | Msa0456070:intron | 30.0% | |
| TTTGGCAGATACACATTAAA+GGG | - | chr3_3:49351918-49351937 | Msa0456070:intron | 30.0% | |
| CATAAACTAGCAATGGTTTA+GGG | + | chr3_3:49351947-49351966 | None:intergenic | 30.0% | |
| ACATAAACTAGCAATGGTTT+AGG | + | chr3_3:49351948-49351967 | None:intergenic | 30.0% | |
| AGGTATACATAAACTAGCAA+TGG | + | chr3_3:49351954-49351973 | None:intergenic | 30.0% | |
| !! | GCTAGTTTATGTATACCTTT+TGG | - | chr3_3:49351956-49351975 | Msa0456070:intron | 30.0% |
| TTTGTTTGCAAGGAAACTTA+TGG | - | chr3_3:49352180-49352199 | Msa0456070:intron | 30.0% | |
| TCTATTAAAACTCCCAAACA+AGG | + | chr3_3:49352215-49352234 | None:intergenic | 30.0% | |
| TGCTTTATATTCTCTGTAGT+CGG | - | chr3_3:49352538-49352557 | Msa0456070:CDS | 30.0% | |
| ACTCACAAAACACTATTATG+TGG | + | chr3_3:49352577-49352596 | None:intergenic | 30.0% | |
| !! | TAGAATGATTTTGATGGTTG+TGG | - | chr3_3:49352614-49352633 | Msa0456070:intron | 30.0% |
| ! | TCTAAGATTGTAACTAAGGA+TGG | + | chr3_3:49353059-49353078 | None:intergenic | 30.0% |
| TATCGATAAGAATAACAGCT+CGG | + | chr3_3:49353248-49353267 | None:intergenic | 30.0% | |
| ! | AAAGAAAATGTTTTGCGAGT+TGG | - | chr3_3:49353299-49353318 | Msa0456070:intron | 30.0% |
| ATTGCTATGAATCAGCATAT+AGG | + | chr3_3:49353366-49353385 | None:intergenic | 30.0% | |
| AAAGTATACTTACTCGAAGT+GGG | + | chr3_3:49353551-49353570 | None:intergenic | 30.0% | |
| TAAAGTATACTTACTCGAAG+TGG | + | chr3_3:49353552-49353571 | None:intergenic | 30.0% | |
| ! | GTTTTGTATCATATAGGAAG+AGG | - | chr3_3:49353683-49353702 | Msa0456070:intron | 30.0% |
| TATGCAAAAACAGAACCTAA+AGG | + | chr3_3:49353743-49353762 | None:intergenic | 30.0% | |
| ! | ATTTTTGTCCATATGGAACA+GGG | + | chr3_3:49353875-49353894 | None:intergenic | 30.0% |
| !! | GTGTTTGATTTTTGTCCATA+TGG | + | chr3_3:49353882-49353901 | None:intergenic | 30.0% |
| !! | ATCAAAGTGTTGTCAAATAG+TGG | + | chr3_3:49353977-49353996 | None:intergenic | 30.0% |
| GATTATTTGAACTTGTACTG+TGG | - | chr3_3:49354256-49354275 | Msa0456070:intron | 30.0% | |
| ! | TTCCACCAAACAATCTTTTT+AGG | - | chr3_3:49354357-49354376 | Msa0456070:intron | 30.0% |
| ! | GATTTAATTTACTCCCAATG+AGG | - | chr3_3:49354884-49354903 | Msa0456070:intron | 30.0% |
| TAAAATACATGCACCTCATT+GGG | + | chr3_3:49354900-49354919 | None:intergenic | 30.0% | |
| TTAAAATACATGCACCTCAT+TGG | + | chr3_3:49354901-49354920 | None:intergenic | 30.0% | |
| !!! | TTTTTTTGGACCAAAAACCA+AGG | - | chr3_3:49355026-49355045 | Msa0456070:intron | 30.0% |
| !! | CCAAATAAATCCTTGGTTTT+TGG | + | chr3_3:49355039-49355058 | None:intergenic | 30.0% |
| CCAAAAACCAAGGATTTATT+TGG | - | chr3_3:49355036-49355055 | Msa0456070:intron | 30.0% | |
| !! | TTTATTTGGGAGTGCTTATT+TGG | - | chr3_3:49355050-49355069 | Msa0456070:intron | 30.0% |
| CAAGCTCTTCAATTATTCAA+TGG | - | chr3_3:49355667-49355686 | Msa0456070:intron | 30.0% | |
| TCAATTATTCAATGGCAATG+AGG | - | chr3_3:49355675-49355694 | Msa0456070:intron | 30.0% | |
| GACTGTAAATATCATCAATC+AGG | + | chr3_3:49355835-49355854 | None:intergenic | 30.0% | |
| ! | ATATTACTTGTTGAAGGGGT+TGG | + | chr3_3:49347969-49347988 | None:intergenic | 35.0% |
| CAGTGATCTTCATGTTGAAT+TGG | + | chr3_3:49348093-49348112 | None:intergenic | 35.0% | |
| ! | ACCCTTTTATGTGTTATAGG+TGG | - | chr3_3:49348236-49348255 | Msa0456070:intron | 35.0% |
| GTTATAGGTGGAAAACGTTA+AGG | - | chr3_3:49348248-49348267 | Msa0456070:intron | 35.0% | |
| ! | AAACGTTAAGGCATTACTTG+AGG | - | chr3_3:49348260-49348279 | Msa0456070:intron | 35.0% |
| ATCCTTCCATCTCATACTTA+CGG | + | chr3_3:49348823-49348842 | None:intergenic | 35.0% | |
| TAAGCTCTCCATGATAACTA+TGG | - | chr3_3:49349027-49349046 | Msa0456070:intron | 35.0% | |
| ! | AGCTGTTTCCATAGTTATCA+TGG | + | chr3_3:49349038-49349057 | None:intergenic | 35.0% |
| !!! | ATTGCAAATTTTTTTCGCCC+GGG | - | chr3_3:49349389-49349408 | Msa0456070:intron | 35.0% |
| ACTACAATTAACATGAGCAC+AGG | + | chr3_3:49349507-49349526 | None:intergenic | 35.0% | |
| TTTCAGCAGTTACAAAATCC+AGG | - | chr3_3:49349539-49349558 | Msa0456070:intron | 35.0% | |
| GTGAGTAATAATTGCCTAGT+AGG | + | chr3_3:49349669-49349688 | None:intergenic | 35.0% | |
| GATTTGAGCTTCAATACTGA+TGG | - | chr3_3:49350054-49350073 | Msa0456070:intron | 35.0% | |
| AAACAGCTAATCAACAGAGA+AGG | + | chr3_3:49350241-49350260 | None:intergenic | 35.0% | |
| !!! | GCTTGCTTGTTATTTGGTTT+TGG | - | chr3_3:49350328-49350347 | Msa0456070:CDS | 35.0% |
| ! | GAATAGTTTGTGCTAACTCT+GGG | + | chr3_3:49350400-49350419 | None:intergenic | 35.0% |
| ! | AGAATAGTTTGTGCTAACTC+TGG | + | chr3_3:49350401-49350420 | None:intergenic | 35.0% |
| AGAGTTAGCACAAACTATTC+TGG | - | chr3_3:49350400-49350419 | Msa0456070:intron | 35.0% | |
| GAGTTAGCACAAACTATTCT+GGG | - | chr3_3:49350401-49350420 | Msa0456070:intron | 35.0% | |
| TCTTCTCTTCATATGTCAAG+AGG | - | chr3_3:49350534-49350553 | Msa0456070:CDS | 35.0% | |
| CTGAACAAAAAATTACCTGG+CGG | + | chr3_3:49350719-49350738 | None:intergenic | 35.0% | |
| ACTTTGTTGAAGACGTGATT+AGG | + | chr3_3:49350843-49350862 | None:intergenic | 35.0% | |
| GTCATCAATTCCTTTCTGTA+TGG | + | chr3_3:49351136-49351155 | None:intergenic | 35.0% | |
| TGACCTGAAATATTACAGCT+TGG | + | chr3_3:49351273-49351292 | None:intergenic | 35.0% | |
| TATGTTGACATGGAGGTTAA+TGG | - | chr3_3:49351298-49351317 | Msa0456070:intron | 35.0% | |
| !! | TGACAGAAAGTTTTGTGGAA+TGG | - | chr3_3:49351415-49351434 | Msa0456070:intron | 35.0% |
| GGAATGGAACATGCATTAAA+TGG | - | chr3_3:49351431-49351450 | Msa0456070:intron | 35.0% | |
| ! | TTTCAGGCATTTGTTGATAG+TGG | - | chr3_3:49351466-49351485 | Msa0456070:intron | 35.0% |
| ! | AGCGCAGTCTTTTGATATAA+TGG | + | chr3_3:49351503-49351522 | None:intergenic | 35.0% |
| ACTTTGATGAAGATCAGTTC+TGG | - | chr3_3:49351890-49351909 | Msa0456070:intron | 35.0% | |
| ! | AGATCAGTTCTGGTTACATT+TGG | - | chr3_3:49351900-49351919 | Msa0456070:intron | 35.0% |
| !! | TATGTTTGTGAGTTGGTTTG+TGG | + | chr3_3:49352151-49352170 | None:intergenic | 35.0% |
| ! | TTGTTTGGAGTTAAAGGGAA+AGG | + | chr3_3:49352425-49352444 | None:intergenic | 35.0% |
| !!! | GGGTTTTGTTTGGAGTTAAA+GGG | + | chr3_3:49352430-49352449 | None:intergenic | 35.0% |
| !!! | AGGGTTTTGTTTGGAGTTAA+AGG | + | chr3_3:49352431-49352450 | None:intergenic | 35.0% |
| ! | CTTTTAGATCAGCGTTACAA+AGG | - | chr3_3:49352657-49352676 | Msa0456070:CDS | 35.0% |
| TTCTACCCAATATTTCGGTT+TGG | + | chr3_3:49352701-49352720 | None:intergenic | 35.0% | |
| AATACATGTAGCTCCAATCA+AGG | - | chr3_3:49352719-49352738 | Msa0456070:intron | 35.0% | |
| CCAAAGAGAAACTCCATATT+GGG | + | chr3_3:49353008-49353027 | None:intergenic | 35.0% | |
| CCAATATGGAGTTTCTCTTT+GGG | - | chr3_3:49353006-49353025 | Msa0456070:intron | 35.0% | |
| GAAAACCAACCTTGCAAAAA+TGG | + | chr3_3:49353344-49353363 | None:intergenic | 35.0% | |
| TCTGCACATAACAACAAGAA+GGG | + | chr3_3:49353462-49353481 | None:intergenic | 35.0% | |
| ! | TTTTTGTCCATATGGAACAG+GGG | + | chr3_3:49353874-49353893 | None:intergenic | 35.0% |
| ! | GATTTTTGTCCATATGGAAC+AGG | + | chr3_3:49353876-49353895 | None:intergenic | 35.0% |
| !! | ACACAAAGTGTTGTCAATTG+TGG | - | chr3_3:49353898-49353917 | Msa0456070:intron | 35.0% |
| TTGTCAAATAGTGGCTATAG+TGG | + | chr3_3:49353968-49353987 | None:intergenic | 35.0% | |
| TTTGTATTGCCCTATGCTAT+AGG | - | chr3_3:49354031-49354050 | Msa0456070:intron | 35.0% | |
| TTGTATTGCCCTATGCTATA+GGG | - | chr3_3:49354032-49354051 | Msa0456070:intron | 35.0% | |
| AATAATGGCCCTATAGCATA+GGG | + | chr3_3:49354043-49354062 | None:intergenic | 35.0% | |
| AAATAATGGCCCTATAGCAT+AGG | + | chr3_3:49354044-49354063 | None:intergenic | 35.0% | |
| TATGCTATAGGGCCATTATT+TGG | - | chr3_3:49354043-49354062 | Msa0456070:intron | 35.0% | |
| TTTGCAGGATTGCCAAATAA+TGG | + | chr3_3:49354058-49354077 | None:intergenic | 35.0% | |
| AATCAAAGTGACATGTTTGC+AGG | + | chr3_3:49354073-49354092 | None:intergenic | 35.0% | |
| AAGACAGTTATGGCTAATTC+TGG | - | chr3_3:49354110-49354129 | Msa0456070:intron | 35.0% | |
| AGCCTAAAAAGATTGTTTGG+TGG | + | chr3_3:49354362-49354381 | None:intergenic | 35.0% | |
| GCAAGCCTAAAAAGATTGTT+TGG | + | chr3_3:49354365-49354384 | None:intergenic | 35.0% | |
| !!! | ACTTATTTTTCAGGAGCTTC+TGG | - | chr3_3:49354572-49354591 | Msa0456070:intron | 35.0% |
| ! | GATAAAGCACTAATCTTTGG+AGG | + | chr3_3:49354681-49354700 | None:intergenic | 35.0% |
| TGGACTTAGTTTATGACCTA+AGG | - | chr3_3:49355070-49355089 | Msa0456070:intron | 35.0% | |
| ACTTAGTTTATGACCTAAGG+AGG | - | chr3_3:49355073-49355092 | Msa0456070:intron | 35.0% | |
| TTCATTTGTGTTTGCGACTA+TGG | + | chr3_3:49355106-49355125 | None:intergenic | 35.0% | |
| AACACTAACCCAAGTAACTT+AGG | + | chr3_3:49355280-49355299 | None:intergenic | 35.0% | |
| !! | AAGTTACTTGGGTTAGTGTT+TGG | - | chr3_3:49355280-49355299 | Msa0456070:intron | 35.0% |
| GTGAACTTAACATGGATTTG+AGG | + | chr3_3:49355460-49355479 | None:intergenic | 35.0% | |
| ATCCATGTTAAGTTCACCAT+TGG | - | chr3_3:49355463-49355482 | Msa0456070:intron | 35.0% | |
| TACCAATGGTGAACTTAACA+TGG | + | chr3_3:49355468-49355487 | None:intergenic | 35.0% | |
| ACACATCAAATGTGTACCAA+TGG | + | chr3_3:49355482-49355501 | None:intergenic | 35.0% | |
| ACACATTTGATGTGTGAATG+TGG | - | chr3_3:49355487-49355506 | Msa0456070:intron | 35.0% | |
| !! | TTTTGAAGGTTCCCTGATTA+TGG | - | chr3_3:49355563-49355582 | Msa0456070:intron | 35.0% |
| AAACCAACCAACCATAATCA+GGG | + | chr3_3:49355577-49355596 | None:intergenic | 35.0% | |
| ! | AGAGAGGTTTGCTTTATCGA+TGG | + | chr3_3:49348039-49348058 | None:intergenic | 40.0% |
| GTTGAAGAACAAGAAGAGAG+AGG | + | chr3_3:49348055-49348074 | None:intergenic | 40.0% | |
| ! | TAAGGCATTACTTGAGGTTG+AGG | - | chr3_3:49348266-49348285 | Msa0456070:intron | 40.0% |
| GGAAAAAACGAGATGGGTAT+TGG | + | chr3_3:49348307-49348326 | None:intergenic | 40.0% | |
| TCTCAGAAATTGAGTGCACT+TGG | - | chr3_3:49348647-49348666 | Msa0456070:intron | 40.0% | |
| !! | ATTGAGTGCACTTGGTGTTA+AGG | - | chr3_3:49348655-49348674 | Msa0456070:intron | 40.0% |
| TTTCCTCCGTAAGTATGAGA+TGG | - | chr3_3:49348814-49348833 | Msa0456070:intron | 40.0% | |
| AATAACTCGATCTAAACGGG+CGG | + | chr3_3:49348909-49348928 | None:intergenic | 40.0% | |
| CATGCTACACTAACCCATTA+AGG | - | chr3_3:49349190-49349209 | Msa0456070:intron | 40.0% | |
| TACACTAACCCATTAAGGCA+GGG | - | chr3_3:49349195-49349214 | Msa0456070:intron | 40.0% | |
| ! | CCAGGATTTTTATAAAGCCC+GGG | + | chr3_3:49349409-49349428 | None:intergenic | 40.0% |
| ! | GCCAGGATTTTTATAAAGCC+CGG | + | chr3_3:49349410-49349429 | None:intergenic | 40.0% |
| TTTAGCATGCCTTAATGCAG+TGG | + | chr3_3:49349437-49349456 | None:intergenic | 40.0% | |
| TGTCTCTTCACAAACCTACT+AGG | - | chr3_3:49349652-49349671 | Msa0456070:intron | 40.0% | |
| GCGTTGCCATATAACTGAAT+TGG | - | chr3_3:49349700-49349719 | Msa0456070:intron | 40.0% | |
| AAGTTTGGAAGATGCTTAGC+TGG | - | chr3_3:49349795-49349814 | Msa0456070:intron | 40.0% | |
| AGCTGGTACCACTTGAAATA+TGG | - | chr3_3:49349812-49349831 | Msa0456070:intron | 40.0% | |
| GACGCTGTAATTCACTTCTT+TGG | + | chr3_3:49350472-49350491 | None:intergenic | 40.0% | |
| GCGTCAAAAAGAAGAAGAGT+TGG | - | chr3_3:49350487-49350506 | Msa0456070:intron | 40.0% | |
| CACAAGGAATACGAATGAAG+CGG | + | chr3_3:49350580-49350599 | None:intergenic | 40.0% | |
| ACAAAAAATTACCTGGCGGA+TGG | + | chr3_3:49350715-49350734 | None:intergenic | 40.0% | |
| TGAGGACAGCAAGAAGTAAT+TGG | + | chr3_3:49351050-49351069 | None:intergenic | 40.0% | |
| ! | ATTACTTCTTGCTGTCCTCA+AGG | - | chr3_3:49351050-49351069 | Msa0456070:intron | 40.0% |
| GGTCATGTTGTATGTTGACA+TGG | - | chr3_3:49351288-49351307 | Msa0456070:intron | 40.0% | |
| CATGTTGTATGTTGACATGG+AGG | - | chr3_3:49351291-49351310 | Msa0456070:intron | 40.0% | |
| GGTTAATGGTGTACCATTGA+AGG | - | chr3_3:49351312-49351331 | Msa0456070:intron | 40.0% | |
| AGGACCAGAAAAAGAGCAAT+AGG | + | chr3_3:49351389-49351408 | None:intergenic | 40.0% | |
| GGTATGCACTTCGATATAAC+TGG | - | chr3_3:49351533-49351552 | Msa0456070:intron | 40.0% | |
| !! | GTGTTTGCGAGTTGGATTTT+TGG | - | chr3_3:49351981-49352000 | Msa0456070:intron | 40.0% |
| !! | TTTGCGAGTTGGATTTTTGG+AGG | - | chr3_3:49351984-49352003 | Msa0456070:intron | 40.0% |
| !! | TTGCGAGTTGGATTTTTGGA+GGG | - | chr3_3:49351985-49352004 | Msa0456070:intron | 40.0% |
| !! | TTTGTGAGTTGGTTTGTGGA+GGG | + | chr3_3:49352147-49352166 | None:intergenic | 40.0% |
| CTTAGGGTATGTTTGTGAGT+TGG | + | chr3_3:49352158-49352177 | None:intergenic | 40.0% | |
| CAACTCACAAACATACCCTA+AGG | - | chr3_3:49352156-49352175 | Msa0456070:intron | 40.0% | |
| TCCTTGCAAACAAAGCCTTA+GGG | + | chr3_3:49352174-49352193 | None:intergenic | 40.0% | |
| TTCCTTGCAAACAAAGCCTT+AGG | + | chr3_3:49352175-49352194 | None:intergenic | 40.0% | |
| TTGCAAGGAAACTTATGGAG+AGG | - | chr3_3:49352185-49352204 | Msa0456070:intron | 40.0% | |
| ATGGAGAGGTAAACCTTGTT+TGG | - | chr3_3:49352199-49352218 | Msa0456070:intron | 40.0% | |
| ! | TGGAGAGGTAAACCTTGTTT+GGG | - | chr3_3:49352200-49352219 | Msa0456070:intron | 40.0% |
| TTAAAGGGAAAGGAGATGGA+GGG | + | chr3_3:49352415-49352434 | None:intergenic | 40.0% | |
| !!! | CTTTGTTTGCGAGTTTTGAG+GGG | + | chr3_3:49352474-49352493 | None:intergenic | 40.0% |
| !!! | GCTTTGTTTGCGAGTTTTGA+GGG | + | chr3_3:49352475-49352494 | None:intergenic | 40.0% |
| AAACTCGCAAACAAAGCCTA+AGG | - | chr3_3:49352478-49352497 | Msa0456070:intron | 40.0% | |
| AACTCGCAAACAAAGCCTAA+GGG | - | chr3_3:49352479-49352498 | Msa0456070:intron | 40.0% | |
| AGATCAGCGTTACAAAGGAA+TGG | - | chr3_3:49352662-49352681 | Msa0456070:CDS | 40.0% | |
| AGTTGGCCAAACCGAAATAT+TGG | - | chr3_3:49352692-49352711 | Msa0456070:CDS | 40.0% | |
| GTTGGCCAAACCGAAATATT+GGG | - | chr3_3:49352693-49352712 | Msa0456070:intron | 40.0% | |
| TTAACAGATCTCGTGGACAA+AGG | - | chr3_3:49352749-49352768 | Msa0456070:intron | 40.0% | |
| TAACAGATCTCGTGGACAAA+GGG | - | chr3_3:49352750-49352769 | Msa0456070:intron | 40.0% | |
| ! | GTGGACAAAGGGAAAGATTT+TGG | - | chr3_3:49352761-49352780 | Msa0456070:intron | 40.0% |
| CCAGCACTAAGAAAGAACAA+GGG | + | chr3_3:49352980-49352999 | None:intergenic | 40.0% | |
| TCCAGCACTAAGAAAGAACA+AGG | + | chr3_3:49352981-49353000 | None:intergenic | 40.0% | |
| CCCAATATGGAGTTTCTCTT+TGG | - | chr3_3:49353005-49353024 | Msa0456070:intron | 40.0% | |
| CCCAAAGAGAAACTCCATAT+TGG | + | chr3_3:49353009-49353028 | None:intergenic | 40.0% | |
| ! | ATTCTCACCGGTGTCAATTT+AGG | - | chr3_3:49353180-49353199 | Msa0456070:intron | 40.0% |
| !! | GAAAATGTTTTGCGAGTTGG+TGG | - | chr3_3:49353302-49353321 | Msa0456070:intron | 40.0% |
| !!! | GTTTCTGTGCCATTTTTGCA+AGG | - | chr3_3:49353332-49353351 | Msa0456070:intron | 40.0% |
| CTCTGCACATAACAACAAGA+AGG | + | chr3_3:49353463-49353482 | None:intergenic | 40.0% | |
| ACTTTGCCTCGTCTAAAAAC+CGG | + | chr3_3:49353500-49353519 | None:intergenic | 40.0% | |
| !! | AATGATAACGGTGTGTTGTG+TGG | - | chr3_3:49354164-49354183 | Msa0456070:intron | 40.0% |
| !! | CATTCTTTCAGGTTGCATCA+GGG | - | chr3_3:49354187-49354206 | Msa0456070:intron | 40.0% |
| AGCAATAATCCATCACAAGG+AGG | - | chr3_3:49354210-49354229 | Msa0456070:intron | 40.0% | |
| GGTGGAATGAACCTCTAAAT+AGG | + | chr3_3:49354344-49354363 | None:intergenic | 40.0% | |
| ATTAAGTACGACGTGCGAAA+AGG | + | chr3_3:49354655-49354674 | None:intergenic | 40.0% | |
| ! | GTTTAGAGCATAAGCAAGCA+AGG | + | chr3_3:49354991-49355010 | None:intergenic | 40.0% |
| ! | CTTGCTTATGCTCTAAACCA+AGG | - | chr3_3:49354993-49355012 | Msa0456070:intron | 40.0% |
| AGCACTCCCAAATAAATCCT+TGG | + | chr3_3:49355046-49355065 | None:intergenic | 40.0% | |
| TTCCTCTGACCTAAGTTACT+TGG | - | chr3_3:49355268-49355287 | Msa0456070:intron | 40.0% | |
| TCCTCTGACCTAAGTTACTT+GGG | - | chr3_3:49355269-49355288 | Msa0456070:intron | 40.0% | |
| CAAACCAACCAACCATAATC+AGG | + | chr3_3:49355578-49355597 | None:intergenic | 40.0% | |
| !! | ATTATGGTTGGTTGGTTTGC+AGG | - | chr3_3:49355579-49355598 | Msa0456070:intron | 40.0% |
| TGAGCTAGGATTTGAAAGAC+AGG | - | chr3_3:49355636-49355655 | Msa0456070:intron | 40.0% | |
| ! | AAGCAGCTGGGTTTCTTTTT+GGG | - | chr3_3:49355701-49355720 | Msa0456070:CDS | 40.0% |
| TTGCTAATGATGACCGTCTC+TGG | - | chr3_3:49348686-49348705 | Msa0456070:intron | 45.0% | |
| CTTCCATCTCATACTTACGG+AGG | + | chr3_3:49348820-49348839 | None:intergenic | 45.0% | |
| CTCCGTAAGTATGAGATGGA+AGG | - | chr3_3:49348818-49348837 | Msa0456070:intron | 45.0% | |
| AACCAAACAGCTAGCAAGCA+AGG | + | chr3_3:49348848-49348867 | None:intergenic | 45.0% | |
| CATGTCTCGTTGTCCTAGTT+TGG | + | chr3_3:49349174-49349193 | None:intergenic | 45.0% | |
| CTACACTAACCCATTAAGGC+AGG | - | chr3_3:49349194-49349213 | Msa0456070:intron | 45.0% | |
| ACACTAACCCATTAAGGCAG+GGG | - | chr3_3:49349196-49349215 | Msa0456070:intron | 45.0% | |
| ! | CCCGGGCTTTATAAAAATCC+TGG | - | chr3_3:49349406-49349425 | Msa0456070:intron | 45.0% |
| ! | TTTGATGGGTCAGCTCTTTC+AGG | - | chr3_3:49350128-49350147 | Msa0456070:intron | 45.0% |
| GACGCAGTCGTAAAATTTCC+TGG | + | chr3_3:49350445-49350464 | None:intergenic | 45.0% | |
| GTTATGAACAGTGGTCCTTG+AGG | + | chr3_3:49351068-49351087 | None:intergenic | 45.0% | |
| ! | TCCTGAAGCTTTTGCAAGAG+TGG | - | chr3_3:49351182-49351201 | Msa0456070:CDS | 45.0% |
| ACCACTCTTGCAAAAGCTTC+AGG | + | chr3_3:49351186-49351205 | None:intergenic | 45.0% | |
| GGTGTACCATTGAAGGTAAG+TGG | - | chr3_3:49351319-49351338 | Msa0456070:intron | 45.0% | |
| ! | GCGACCTATTGCTCTTTTTC+TGG | - | chr3_3:49351382-49351401 | Msa0456070:intron | 45.0% |
| GCAACACAGATGTGCAATTG+AGG | - | chr3_3:49351650-49351669 | Msa0456070:intron | 45.0% | |
| AACTCGCAAACACACCCAAA+AGG | + | chr3_3:49351974-49351993 | None:intergenic | 45.0% | |
| !! | TTTTGGGTGTGTTTGCGAGT+TGG | - | chr3_3:49351973-49351992 | Msa0456070:intron | 45.0% |
| !!! | AGTTGGTTTGTGGAGGGTTT+TGG | + | chr3_3:49352141-49352160 | None:intergenic | 45.0% |
| !! | GTTTGTGAGTTGGTTTGTGG+AGG | + | chr3_3:49352148-49352167 | None:intergenic | 45.0% |
| !! | ACCCTAAGGCTTTGTTTGCA+AGG | - | chr3_3:49352170-49352189 | Msa0456070:intron | 45.0% |
| GTTAAAGGGAAAGGAGATGG+AGG | + | chr3_3:49352416-49352435 | None:intergenic | 45.0% | |
| GGAGTTAAAGGGAAAGGAGA+TGG | + | chr3_3:49352419-49352438 | None:intergenic | 45.0% | |
| !!! | AGGCTTAGGAGGGTTTTGTT+TGG | + | chr3_3:49352440-49352459 | None:intergenic | 45.0% |
| !!! | GGCTTTGTTTGCGAGTTTTG+AGG | + | chr3_3:49352476-49352495 | None:intergenic | 45.0% |
| TCAACTAGAGAGAGACCCTT+AGG | + | chr3_3:49352497-49352516 | None:intergenic | 45.0% | |
| CGTTACAAAGGAATGGCTCA+TGG | - | chr3_3:49352669-49352688 | Msa0456070:CDS | 45.0% | |
| AAAGGAATGGCTCATGGAGT+TGG | - | chr3_3:49352675-49352694 | Msa0456070:CDS | 45.0% | |
| CCCTTGTTCTTTCTTAGTGC+TGG | - | chr3_3:49352977-49352996 | Msa0456070:intron | 45.0% | |
| ! | AGTGCTGGATTCTCCCAATA+TGG | - | chr3_3:49352992-49353011 | Msa0456070:intron | 45.0% |
| TATGGAGTTTCTCTTTGGGC+TGG | - | chr3_3:49353010-49353029 | Msa0456070:intron | 45.0% | |
| AGGATGGTACCTGATGCTTT+CGG | + | chr3_3:49353043-49353062 | None:intergenic | 45.0% | |
| !! | TTGAGTTGGCCTAGTGGTAT+TGG | - | chr3_3:49353114-49353133 | Msa0456070:intron | 45.0% |
| ! | TCACCGGTGTCAATTTAGGT+GGG | - | chr3_3:49353184-49353203 | Msa0456070:intron | 45.0% |
| TAGCCCACCTAAATTGACAC+CGG | + | chr3_3:49353190-49353209 | None:intergenic | 45.0% | |
| !!! | AATGTTTTGCGAGTTGGTGG+AGG | - | chr3_3:49353305-49353324 | Msa0456070:intron | 45.0% |
| !!! | CTGTGCCATTTTTGCAAGGT+TGG | - | chr3_3:49353336-49353355 | Msa0456070:intron | 45.0% |
| CAGAGAAAGACATACCATCC+CGG | - | chr3_3:49353478-49353497 | Msa0456070:intron | 45.0% | |
| CTTTGCCTCGTCTAAAAACC+GGG | + | chr3_3:49353499-49353518 | None:intergenic | 45.0% | |
| ! | AGACGAGGCAAAGTATTCCA+AGG | - | chr3_3:49353506-49353525 | Msa0456070:intron | 45.0% |
| TTGCTTTCCCCTGTTCCATA+TGG | - | chr3_3:49353864-49353883 | Msa0456070:intron | 45.0% | |
| !! | GCTATAGTGGTGCTATAGCA+CGG | + | chr3_3:49353955-49353974 | None:intergenic | 45.0% |
| GTGTTGTGTGGCATTCTTTC+AGG | - | chr3_3:49354176-49354195 | Msa0456070:intron | 45.0% | |
| !! | GCATTCTTTCAGGTTGCATC+AGG | - | chr3_3:49354186-49354205 | Msa0456070:intron | 45.0% |
| GGGAGCAATAATCCATCACA+AGG | - | chr3_3:49354207-49354226 | Msa0456070:intron | 45.0% | |
| GAAGAAACACCTCCTTGTGA+TGG | + | chr3_3:49354222-49354241 | None:intergenic | 45.0% | |
| !! | TCACAAGGAGGTGTTTCTTC+TGG | - | chr3_3:49354222-49354241 | Msa0456070:intron | 45.0% |
| AGCTTCTGGTGACAAGTCTA+AGG | - | chr3_3:49354586-49354605 | Msa0456070:intron | 45.0% | |
| CTATGGAAGAATGCCTCCTT+AGG | + | chr3_3:49355089-49355108 | None:intergenic | 45.0% | |
| ACCCAAGTAACTTAGGTCAG+AGG | + | chr3_3:49355273-49355292 | None:intergenic | 45.0% | |
| !! | ACATGGATTTGAGGAGCGTT+TGG | + | chr3_3:49355451-49355470 | None:intergenic | 45.0% |
| GAAGGTTCCCTGATTATGGT+TGG | - | chr3_3:49355567-49355586 | Msa0456070:CDS | 45.0% | |
| GTTCCCTGATTATGGTTGGT+TGG | - | chr3_3:49355571-49355590 | Msa0456070:CDS | 45.0% | |
| !! | GTTGCAAAGCTTGTTGAGCT+AGG | - | chr3_3:49355622-49355641 | Msa0456070:intron | 45.0% |
| ! | CAAGCAGCTGGGTTTCTTTT+TGG | - | chr3_3:49355700-49355719 | Msa0456070:CDS | 45.0% |
| !! | TATATATTTAAAAAAACTAT+TGG | + | chr3_3:49350870-49350889 | None:intergenic | 5.0% |
| !!! | AAATCATTTTTATTTATTTT+TGG | - | chr3_3:49354282-49354301 | Msa0456070:intron | 5.0% |
| !!! | AATCATTTTTATTTATTTTT+GGG | - | chr3_3:49354283-49354302 | Msa0456070:intron | 5.0% |
| !! | AAAAACAAATTTAATTATAT+GGG | + | chr3_3:49354485-49354504 | None:intergenic | 5.0% |
| !!! | ATTTTTTTTAATAATGAAAA+AGG | + | chr3_3:49355195-49355214 | None:intergenic | 5.0% |
| !!! | ATTCTTATTTAAAAAAAAAA+AGG | - | chr3_3:49355737-49355756 | Msa0456070:exon | 5.0% |
| ! | TGCCTTGCTTGCTAGCTGTT+TGG | - | chr3_3:49348843-49348862 | Msa0456070:intron | 50.0% |
| CACGCAAGTGCTTATACCAG+TGG | + | chr3_3:49348941-49348960 | None:intergenic | 50.0% | |
| AGAACCACCCCTGCCTTAAT+GGG | + | chr3_3:49349206-49349225 | None:intergenic | 50.0% | |
| TAGAACCACCCCTGCCTTAA+TGG | + | chr3_3:49349207-49349226 | None:intergenic | 50.0% | |
| ! | TTAAGGCAGGGGTGGTTCTA+AGG | - | chr3_3:49349207-49349226 | Msa0456070:intron | 50.0% |
| AAAAAATTTGGGCCGGAGCC+CGG | + | chr3_3:49349255-49349274 | None:intergenic | 50.0% | |
| AGCATGCCTTAATGCAGTGG+CGG | + | chr3_3:49349434-49349453 | None:intergenic | 50.0% | |
| TATGGCAACGCAGCAGAAGT+TGG | + | chr3_3:49349691-49349710 | None:intergenic | 50.0% | |
| ! | AGTGCTGCTGAAAAGCAGCA+GGG | + | chr3_3:49350092-49350111 | None:intergenic | 50.0% |
| ! | AAGTGCTGCTGAAAAGCAGC+AGG | + | chr3_3:49350093-49350112 | None:intergenic | 50.0% |
| GAGTGGCCACTTACCTTCAA+TGG | + | chr3_3:49351328-49351347 | None:intergenic | 50.0% | |
| AAAGACTGCGCTGAGCGTTT+AGG | - | chr3_3:49351511-49351530 | Msa0456070:intron | 50.0% | |
| AAGACTGCGCTGAGCGTTTA+GGG | - | chr3_3:49351512-49351531 | Msa0456070:intron | 50.0% | |
| !!! | GGTTTGTGGAGGGTTTTGGA+GGG | + | chr3_3:49352137-49352156 | None:intergenic | 50.0% |
| !! | TGGTTTGTGGAGGGTTTTGG+AGG | + | chr3_3:49352138-49352157 | None:intergenic | 50.0% |
| !!! | TTTGCGAGTTTTGAGGGGAG+GGG | + | chr3_3:49352469-49352488 | None:intergenic | 50.0% |
| !!! | GTTTGCGAGTTTTGAGGGGA+GGG | + | chr3_3:49352470-49352489 | None:intergenic | 50.0% |
| !!! | TGTTTGCGAGTTTTGAGGGG+AGG | + | chr3_3:49352471-49352490 | None:intergenic | 50.0% |
| AGGGTCTCTCTCTAGTTGAC+TGG | - | chr3_3:49352498-49352517 | Msa0456070:intron | 50.0% | |
| !! | GGATATGCTCCGAAAGCATC+AGG | - | chr3_3:49353031-49353050 | Msa0456070:intron | 50.0% |
| ACCACTAGGCCAACTCAAGT+GGG | + | chr3_3:49353112-49353131 | None:intergenic | 50.0% | |
| TACCACTAGGCCAACTCAAG+TGG | + | chr3_3:49353113-49353132 | None:intergenic | 50.0% | |
| !! | TTGGCCTAGTGGTATTGGCT+TGG | - | chr3_3:49353119-49353138 | Msa0456070:intron | 50.0% |
| !! | TGGCCTAGTGGTATTGGCTT+GGG | - | chr3_3:49353120-49353139 | Msa0456070:intron | 50.0% |
| GATCCCAAGCCAATACCACT+AGG | + | chr3_3:49353126-49353145 | None:intergenic | 50.0% | |
| !! | AGTGGTATTGGCTTGGGATC+TGG | - | chr3_3:49353126-49353145 | Msa0456070:intron | 50.0% |
| !! | GTGGTATTGGCTTGGGATCT+GGG | - | chr3_3:49353127-49353146 | Msa0456070:intron | 50.0% |
| ! | CTCACCGGTGTCAATTTAGG+TGG | - | chr3_3:49353183-49353202 | Msa0456070:intron | 50.0% |
| !! | ACCATCCCGGTTTTTAGACG+AGG | - | chr3_3:49353491-49353510 | Msa0456070:intron | 50.0% |
| TCCAAGGAAGCTTCAAGCTC+AGG | - | chr3_3:49353522-49353541 | Msa0456070:intron | 50.0% | |
| TCCTGAGCTTGAAGCTTCCT+TGG | + | chr3_3:49353526-49353545 | None:intergenic | 50.0% | |
| GCTATAGCACGGTAGCATTG+CGG | + | chr3_3:49353944-49353963 | None:intergenic | 50.0% | |
| !! | GACTTTTTCCGGGATAGTGC+TGG | - | chr3_3:49354410-49354429 | Msa0456070:intron | 50.0% |
| !! | TTTCCGGGATAGTGCTGGTT+AGG | - | chr3_3:49354415-49354434 | Msa0456070:intron | 50.0% |
| AAGCCTAACCAGCACTATCC+CGG | + | chr3_3:49354421-49354440 | None:intergenic | 50.0% | |
| GCAATGAGGAACAAGCAGCT+GGG | - | chr3_3:49355689-49355708 | Msa0456070:CDS | 50.0% | |
| ATACCTAGAAGCAGCAGCGC+CGG | + | chr3_3:49348720-49348739 | None:intergenic | 55.0% | |
| TAAACGGGCGGTCAAACCCA+AGG | + | chr3_3:49348897-49348916 | None:intergenic | 55.0% | |
| CTAACCCATTAAGGCAGGGG+TGG | - | chr3_3:49349199-49349218 | Msa0456070:intron | 55.0% | |
| AAAAATTTGGGCCGGAGCCC+GGG | + | chr3_3:49349254-49349273 | None:intergenic | 55.0% | |
| GGGGAAGGAAAGGCTTAGGA+GGG | + | chr3_3:49352450-49352469 | None:intergenic | 55.0% | |
| AGGGGAAGGAAAGGCTTAGG+AGG | + | chr3_3:49352451-49352470 | None:intergenic | 55.0% | |
| TTTGAGGGGAGGGGAAGGAA+AGG | + | chr3_3:49352460-49352479 | None:intergenic | 55.0% | |
| CACCGAGAACCCACTTGAGT+TGG | - | chr3_3:49353100-49353119 | Msa0456070:intron | 55.0% | |
| ! | GGCCAACTCAAGTGGGTTCT+CGG | + | chr3_3:49353105-49353124 | None:intergenic | 55.0% |
| !! | ACCCACTTGAGTTGGCCTAG+TGG | - | chr3_3:49353108-49353127 | Msa0456070:intron | 55.0% |
| GTCTCGGGTTCGATTCTCAC+CGG | - | chr3_3:49353168-49353187 | Msa0456070:CDS | 55.0% | |
| GCCTCGTCTAAAAACCGGGA+TGG | + | chr3_3:49353495-49353514 | None:intergenic | 55.0% | |
| GGCAATGAGGAACAAGCAGC+TGG | - | chr3_3:49355688-49355707 | Msa0456070:CDS | 55.0% | |
| ATGATGACCGTCTCTGGCGC+TGG | - | chr3_3:49348692-49348711 | Msa0456070:intron | 60.0% | |
| ! | CTTAATGCAGTGGCGGAGCC+AGG | + | chr3_3:49349427-49349446 | None:intergenic | 60.0% |
| CTGGCTCCGCCACTGCATTA+AGG | - | chr3_3:49349425-49349444 | Msa0456070:intron | 60.0% | |
| GAGCACACTGAGCTACAGCC+TGG | + | chr3_3:49349560-49349579 | None:intergenic | 60.0% | |
| GATTGAAGCTGCCATCCGCC+AGG | - | chr3_3:49350701-49350720 | Msa0456070:intron | 60.0% | |
| GGGAGGGGAAGGAAAGGCTT+AGG | + | chr3_3:49352454-49352473 | None:intergenic | 60.0% | |
| !!! | CGAGTTTTGAGGGGAGGGGA+AGG | + | chr3_3:49352465-49352484 | None:intergenic | 60.0% |
| ! | TGGCTTGGGATCTGGGAGTG+TGG | - | chr3_3:49353134-49353153 | Msa0456070:CDS | 60.0% |
| TGTGGTCCTCCTCGAGGTCT+CGG | - | chr3_3:49353152-49353171 | Msa0456070:CDS | 60.0% | |
| GAATCGAACCCGAGACCTCG+AGG | + | chr3_3:49353164-49353183 | None:intergenic | 60.0% | |
| !! | GCAGGGGTGGTTCTAAGGCC+CGG | - | chr3_3:49349212-49349231 | Msa0456070:intron | 65.0% |
| ! | TGGGAGTGTGGTCCTCCTCG+AGG | - | chr3_3:49353146-49353165 | Msa0456070:CDS | 65.0% |
| GTGGTCCTCCTCGAGGTCTC+GGG | - | chr3_3:49353153-49353172 | Msa0456070:CDS | 65.0% | |
| TCGAACCCGAGACCTCGAGG+AGG | + | chr3_3:49353161-49353180 | None:intergenic | 65.0% | |
| !! | ACCGTCTCTGGCGCTGGTGC+CGG | - | chr3_3:49348698-49348717 | Msa0456070:intron | 70.0% |
| ! | GTGCCGGCGCTGCTGCTTCT+AGG | - | chr3_3:49348714-49348733 | Msa0456070:intron | 70.0% |
| !! | GTTCTAAGGCCCGGCGAGCC+CGG | - | chr3_3:49349221-49349240 | Msa0456070:intron | 70.0% |
| !! | TTCTAAGGCCCGGCGAGCCC+GGG | - | chr3_3:49349222-49349241 | Msa0456070:intron | 70.0% |
| GCCGGCACCAGCGCCAGAGA+CGG | + | chr3_3:49348702-49348721 | None:intergenic | 75.0% | |
| ! | GGCGAGTGCCCGGGCTCGCC+GGG | + | chr3_3:49349233-49349252 | None:intergenic | 85.0% |
| ! | GGGCGAGTGCCCGGGCTCGC+CGG | + | chr3_3:49349234-49349253 | None:intergenic | 85.0% |
| ! | GGCGAGCCCGGGCACTCGCC+CGG | - | chr3_3:49349233-49349252 | Msa0456070:intron | 85.0% |
| ! | GCGAGCCCGGGCACTCGCCC+GGG | - | chr3_3:49349234-49349253 | Msa0456070:intron | 85.0% |
| ! | CGGAGCCCGGGCGAGTGCCC+GGG | + | chr3_3:49349242-49349261 | None:intergenic | 85.0% |
| ! | CCGGAGCCCGGGCGAGTGCC+CGG | + | chr3_3:49349243-49349262 | None:intergenic | 85.0% |
| ! | CCGGGCACTCGCCCGGGCTC+CGG | - | chr3_3:49349240-49349259 | Msa0456070:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 49347955 | 49355897 | 49347955 | ID=Msa0456070;Name=Msa0456070 |
| chr3_3 | mRNA | 49347955 | 49355897 | 49347955 | ID=Msa0456070-mRNA-1;Parent=Msa0456070;Name=Msa0456070-mRNA-1;_AED=0.00;_eAED=0.00;_QI=145|1|1|1|1|1|16|171|411 |
| chr3_3 | exon | 49347955 | 49348251 | 49347955 | ID=Msa0456070-mRNA-1:exon:9350;Parent=Msa0456070-mRNA-1 |
| chr3_3 | exon | 49349245 | 49349267 | 49349245 | ID=Msa0456070-mRNA-1:exon:9349;Parent=Msa0456070-mRNA-1 |
| chr3_3 | exon | 49349609 | 49349654 | 49349609 | ID=Msa0456070-mRNA-1:exon:9348;Parent=Msa0456070-mRNA-1 |
| chr3_3 | exon | 49350295 | 49350371 | 49350295 | ID=Msa0456070-mRNA-1:exon:9347;Parent=Msa0456070-mRNA-1 |
| chr3_3 | exon | 49350499 | 49350568 | 49350499 | ID=Msa0456070-mRNA-1:exon:9346;Parent=Msa0456070-mRNA-1 |
| chr3_3 | exon | 49350800 | 49350892 | 49350800 | ID=Msa0456070-mRNA-1:exon:9345;Parent=Msa0456070-mRNA-1 |
| chr3_3 | exon | 49351112 | 49351205 | 49351112 | ID=Msa0456070-mRNA-1:exon:9344;Parent=Msa0456070-mRNA-1 |
| chr3_3 | exon | 49352319 | 49352380 | 49352319 | ID=Msa0456070-mRNA-1:exon:9343;Parent=Msa0456070-mRNA-1 |
| chr3_3 | exon | 49352519 | 49352563 | 49352519 | ID=Msa0456070-mRNA-1:exon:9342;Parent=Msa0456070-mRNA-1 |
| chr3_3 | exon | 49352649 | 49352711 | 49352649 | ID=Msa0456070-mRNA-1:exon:9341;Parent=Msa0456070-mRNA-1 |
| chr3_3 | exon | 49353130 | 49353195 | 49353130 | ID=Msa0456070-mRNA-1:exon:9340;Parent=Msa0456070-mRNA-1 |
| chr3_3 | exon | 49353344 | 49353460 | 49353344 | ID=Msa0456070-mRNA-1:exon:9339;Parent=Msa0456070-mRNA-1 |
| chr3_3 | exon | 49353703 | 49353811 | 49353703 | ID=Msa0456070-mRNA-1:exon:9338;Parent=Msa0456070-mRNA-1 |
| chr3_3 | exon | 49355117 | 49355262 | 49355117 | ID=Msa0456070-mRNA-1:exon:9337;Parent=Msa0456070-mRNA-1 |
| chr3_3 | exon | 49355565 | 49355597 | 49355565 | ID=Msa0456070-mRNA-1:exon:9336;Parent=Msa0456070-mRNA-1 |
| chr3_3 | exon | 49355687 | 49355897 | 49355687 | ID=Msa0456070-mRNA-1:exon:9335;Parent=Msa0456070-mRNA-1 |
| chr3_3 | five_prime_UTR | 49355753 | 49355897 | 49355753 | ID=Msa0456070-mRNA-1:five_prime_utr;Parent=Msa0456070-mRNA-1 |
| chr3_3 | CDS | 49355687 | 49355752 | 49355687 | ID=Msa0456070-mRNA-1:cds;Parent=Msa0456070-mRNA-1 |
| chr3_3 | CDS | 49355565 | 49355597 | 49355565 | ID=Msa0456070-mRNA-1:cds;Parent=Msa0456070-mRNA-1 |
| chr3_3 | CDS | 49355117 | 49355262 | 49355117 | ID=Msa0456070-mRNA-1:cds;Parent=Msa0456070-mRNA-1 |
| chr3_3 | CDS | 49353703 | 49353811 | 49353703 | ID=Msa0456070-mRNA-1:cds;Parent=Msa0456070-mRNA-1 |
| chr3_3 | CDS | 49353344 | 49353460 | 49353344 | ID=Msa0456070-mRNA-1:cds;Parent=Msa0456070-mRNA-1 |
| chr3_3 | CDS | 49353130 | 49353195 | 49353130 | ID=Msa0456070-mRNA-1:cds;Parent=Msa0456070-mRNA-1 |
| chr3_3 | CDS | 49352649 | 49352711 | 49352649 | ID=Msa0456070-mRNA-1:cds;Parent=Msa0456070-mRNA-1 |
| chr3_3 | CDS | 49352519 | 49352563 | 49352519 | ID=Msa0456070-mRNA-1:cds;Parent=Msa0456070-mRNA-1 |
| chr3_3 | CDS | 49352319 | 49352380 | 49352319 | ID=Msa0456070-mRNA-1:cds;Parent=Msa0456070-mRNA-1 |
| chr3_3 | CDS | 49351112 | 49351205 | 49351112 | ID=Msa0456070-mRNA-1:cds;Parent=Msa0456070-mRNA-1 |
| chr3_3 | CDS | 49350800 | 49350892 | 49350800 | ID=Msa0456070-mRNA-1:cds;Parent=Msa0456070-mRNA-1 |
| chr3_3 | CDS | 49350499 | 49350568 | 49350499 | ID=Msa0456070-mRNA-1:cds;Parent=Msa0456070-mRNA-1 |
| chr3_3 | CDS | 49350295 | 49350371 | 49350295 | ID=Msa0456070-mRNA-1:cds;Parent=Msa0456070-mRNA-1 |
| chr3_3 | CDS | 49349609 | 49349654 | 49349609 | ID=Msa0456070-mRNA-1:cds;Parent=Msa0456070-mRNA-1 |
| chr3_3 | CDS | 49349245 | 49349267 | 49349245 | ID=Msa0456070-mRNA-1:cds;Parent=Msa0456070-mRNA-1 |
| chr3_3 | CDS | 49348126 | 49348251 | 49348126 | ID=Msa0456070-mRNA-1:cds;Parent=Msa0456070-mRNA-1 |
| chr3_3 | three_prime_UTR | 49347955 | 49348125 | 49347955 | ID=Msa0456070-mRNA-1:three_prime_utr;Parent=Msa0456070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
