Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0464350 | KEH34859.1 | 92.000 | 300 | 6 | 1 | 1 | 282 | 1 | 300 | 0.0 | 558 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0464350 | sp|Q39234|TGA3_ARATH | 43.574 | 319 | 141 | 5 | 1 | 282 | 19 | 335 | 9.57e-82 | 254 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0464350 | A0A072UYM3 | 92.000 | 300 | 6 | 1 | 1 | 282 | 1 | 300 | 0.0 | 558 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0464350 | TF | bZIP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0218370 | Msa0464350 | 0.801223 | 9.962186e-49 | -8.615850e-47 |
| Msa0236420 | Msa0464350 | 0.810612 | 1.057260e-50 | -8.615850e-47 |
| Msa0464350 | Msa1342380 | 0.807134 | 5.862737e-50 | -8.615850e-47 |
| Msa0270960 | Msa0464350 | 0.814202 | 1.737299e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0464350 | MtrunA17_Chr3g0115371 | 91.694 | 301 | 5 | 2 | 1 | 281 | 1 | 301 | 0.0 | 552 |
| Msa0464350 | MtrunA17_Chr5g0424861 | 59.672 | 305 | 98 | 6 | 1 | 282 | 1 | 303 | 7.41e-113 | 329 |
| Msa0464350 | MtrunA17_Chr3g0124601 | 43.564 | 303 | 148 | 4 | 1 | 282 | 14 | 314 | 8.25e-79 | 243 |
| Msa0464350 | MtrunA17_Chr8g0382861 | 40.066 | 302 | 154 | 7 | 1 | 282 | 15 | 309 | 2.56e-62 | 200 |
| Msa0464350 | MtrunA17_Chr7g0256211 | 40.678 | 295 | 134 | 6 | 13 | 282 | 127 | 405 | 1.39e-61 | 201 |
| Msa0464350 | MtrunA17_Chr8g0353501 | 43.922 | 255 | 114 | 3 | 53 | 282 | 169 | 419 | 4.54e-61 | 200 |
| Msa0464350 | MtrunA17_Chr2g0321431 | 45.763 | 236 | 103 | 5 | 65 | 282 | 194 | 422 | 1.07e-55 | 187 |
| Msa0464350 | MtrunA17_Chr5g0424851 | 54.237 | 177 | 62 | 3 | 124 | 281 | 1 | 177 | 6.37e-55 | 183 |
| Msa0464350 | MtrunA17_Chr5g0424851 | 47.368 | 171 | 72 | 2 | 129 | 281 | 220 | 390 | 3.07e-45 | 158 |
| Msa0464350 | MtrunA17_Chr1g0174701 | 43.373 | 249 | 115 | 4 | 60 | 282 | 211 | 459 | 9.62e-53 | 179 |
| Msa0464350 | MtrunA17_Chr5g0422771 | 39.669 | 242 | 117 | 3 | 63 | 279 | 177 | 414 | 3.95e-52 | 177 |
| Msa0464350 | MtrunA17_Chr7g0258321 | 41.961 | 255 | 122 | 5 | 51 | 279 | 159 | 413 | 8.21e-51 | 173 |
| Msa0464350 | MtrunA17_Chr1g0210151 | 38.521 | 257 | 130 | 5 | 50 | 281 | 39 | 292 | 9.12e-50 | 167 |
| Msa0464350 | MtrunA17_Chr4g0026401 | 38.346 | 266 | 136 | 4 | 32 | 279 | 156 | 411 | 4.65e-49 | 169 |
| Msa0464350 | MtrunA17_Chr3g0093451 | 42.073 | 164 | 85 | 4 | 50 | 204 | 30 | 192 | 1.46e-34 | 124 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0464350 | AT1G22070.1 | 43.574 | 319 | 141 | 5 | 1 | 282 | 19 | 335 | 9.72e-83 | 254 |
| Msa0464350 | AT1G77920.1 | 42.357 | 314 | 139 | 5 | 1 | 282 | 16 | 319 | 4.64e-77 | 239 |
| Msa0464350 | AT5G10030.5 | 41.447 | 304 | 154 | 3 | 1 | 282 | 14 | 315 | 2.23e-76 | 237 |
| Msa0464350 | AT5G10030.3 | 41.447 | 304 | 154 | 3 | 1 | 282 | 14 | 315 | 2.23e-76 | 237 |
| Msa0464350 | AT5G10030.1 | 41.447 | 304 | 154 | 3 | 1 | 282 | 14 | 315 | 2.23e-76 | 237 |
| Msa0464350 | AT5G10030.4 | 41.447 | 304 | 154 | 3 | 1 | 282 | 14 | 315 | 2.23e-76 | 237 |
| Msa0464350 | AT5G10030.2 | 41.447 | 304 | 154 | 3 | 1 | 282 | 14 | 315 | 2.23e-76 | 237 |
| Msa0464350 | AT5G65210.5 | 42.105 | 304 | 152 | 3 | 3 | 282 | 16 | 319 | 4.54e-76 | 236 |
| Msa0464350 | AT5G65210.7 | 42.105 | 304 | 152 | 3 | 3 | 282 | 16 | 319 | 4.54e-76 | 236 |
| Msa0464350 | AT5G65210.3 | 42.105 | 304 | 152 | 3 | 3 | 282 | 16 | 319 | 4.54e-76 | 236 |
| Msa0464350 | AT5G65210.1 | 42.105 | 304 | 152 | 3 | 3 | 282 | 16 | 319 | 4.54e-76 | 236 |
| Msa0464350 | AT5G65210.2 | 42.105 | 304 | 152 | 3 | 3 | 282 | 16 | 319 | 4.54e-76 | 236 |
| Msa0464350 | AT5G65210.4 | 42.105 | 304 | 152 | 3 | 3 | 282 | 16 | 319 | 4.54e-76 | 236 |
| Msa0464350 | AT5G65210.6 | 45.306 | 245 | 116 | 1 | 56 | 282 | 5 | 249 | 4.88e-69 | 216 |
| Msa0464350 | AT5G06960.3 | 44.262 | 244 | 108 | 3 | 63 | 282 | 24 | 263 | 7.25e-60 | 193 |
| Msa0464350 | AT5G06960.2 | 44.262 | 244 | 108 | 3 | 63 | 282 | 44 | 283 | 8.57e-60 | 193 |
| Msa0464350 | AT5G06960.1 | 44.262 | 244 | 108 | 3 | 63 | 282 | 44 | 283 | 8.57e-60 | 193 |
| Msa0464350 | AT3G12250.6 | 42.520 | 254 | 118 | 3 | 53 | 282 | 34 | 283 | 1.18e-59 | 193 |
| Msa0464350 | AT3G12250.2 | 42.520 | 254 | 118 | 3 | 53 | 282 | 34 | 283 | 1.18e-59 | 193 |
| Msa0464350 | AT3G12250.7 | 42.520 | 254 | 118 | 3 | 53 | 282 | 34 | 283 | 1.18e-59 | 193 |
| Msa0464350 | AT3G12250.1 | 42.520 | 254 | 118 | 3 | 53 | 282 | 34 | 283 | 1.18e-59 | 193 |
| Msa0464350 | AT3G12250.3 | 40.824 | 267 | 130 | 3 | 40 | 282 | 15 | 277 | 1.22e-59 | 192 |
| Msa0464350 | AT3G12250.5 | 42.520 | 254 | 118 | 3 | 53 | 282 | 7 | 256 | 1.37e-59 | 192 |
| Msa0464350 | AT3G12250.4 | 42.520 | 254 | 118 | 3 | 53 | 282 | 59 | 308 | 7.63e-59 | 191 |
| Msa0464350 | AT5G06950.2 | 41.732 | 254 | 120 | 3 | 53 | 282 | 34 | 283 | 6.68e-58 | 188 |
| Msa0464350 | AT5G06950.4 | 41.732 | 254 | 120 | 3 | 53 | 282 | 34 | 283 | 6.68e-58 | 188 |
| Msa0464350 | AT5G06950.1 | 41.732 | 254 | 120 | 3 | 53 | 282 | 34 | 283 | 6.68e-58 | 188 |
| Msa0464350 | AT5G06950.5 | 41.732 | 254 | 120 | 3 | 53 | 282 | 34 | 283 | 6.68e-58 | 188 |
| Msa0464350 | AT5G06950.3 | 41.732 | 254 | 120 | 3 | 53 | 282 | 34 | 283 | 6.68e-58 | 188 |
| Msa0464350 | AT1G08320.2 | 40.288 | 278 | 128 | 6 | 32 | 282 | 16 | 282 | 1.03e-57 | 189 |
| Msa0464350 | AT1G08320.5 | 40.288 | 278 | 128 | 6 | 32 | 282 | 16 | 282 | 1.03e-57 | 189 |
| Msa0464350 | AT1G08320.1 | 40.288 | 278 | 128 | 6 | 32 | 282 | 140 | 406 | 4.76e-56 | 187 |
| Msa0464350 | AT1G08320.4 | 40.288 | 278 | 128 | 6 | 32 | 282 | 140 | 406 | 4.76e-56 | 187 |
| Msa0464350 | AT1G08320.3 | 40.288 | 278 | 128 | 6 | 32 | 282 | 140 | 406 | 4.76e-56 | 187 |
| Msa0464350 | AT5G06839.1 | 41.538 | 260 | 111 | 6 | 60 | 282 | 113 | 368 | 3.59e-50 | 171 |
| Msa0464350 | AT5G06839.2 | 41.379 | 261 | 111 | 6 | 60 | 282 | 113 | 369 | 5.05e-50 | 170 |
| Msa0464350 | AT5G06839.3 | 41.538 | 260 | 111 | 6 | 60 | 282 | 156 | 411 | 7.65e-50 | 171 |
| Msa0464350 | AT1G68640.1 | 37.349 | 249 | 126 | 4 | 60 | 282 | 161 | 405 | 4.30e-49 | 169 |
Find 66 sgRNAs with CRISPR-Local
Find 263 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATGATTTGCTGCATTTAA+TGG | 0.080172 | 3_3:+64207749 | None:intergenic |
| TTGAAATTGAATACGGAAAT+TGG | 0.106575 | 3_3:-64208252 | Msa0464350:CDS |
| TGGATTTAGTGAGAGATTAA+TGG | 0.252757 | 3_3:-64209348 | Msa0464350:exon |
| TCCCATAAAACTGGTATCTA+AGG | 0.348603 | 3_3:+64208386 | None:intergenic |
| GTTAGCATAGCAATCTATAT+AGG | 0.348948 | 3_3:-64209878 | Msa0464350:intron |
| CACCCCACATGCTAACTTGC+TGG | 0.350263 | 3_3:+64209309 | None:intergenic |
| GAAAAGCCGGGAGCGCAAAA+AGG | 0.370740 | 3_3:-64208855 | Msa0464350:intron |
| ATGCAATTGGAGCTGGAGAT+TGG | 0.373155 | 3_3:-64208556 | Msa0464350:CDS |
| TGAAATTGAATACGGAAATT+GGG | 0.386776 | 3_3:-64208251 | Msa0464350:CDS |
| ACAAGAGACTACAAACAATA+AGG | 0.391876 | 3_3:-64209030 | Msa0464350:intron |
| TTCAGATGATCCCATAAAAC+TGG | 0.394744 | 3_3:+64208377 | None:intergenic |
| TCCTTGTGAAAGAGCATCTT+CGG | 0.402772 | 3_3:+64207817 | None:intergenic |
| CAGATTGAAGCTCATGCAAT+TGG | 0.405773 | 3_3:-64208569 | Msa0464350:CDS |
| GTTGCGTTTGAAATTGAATA+CGG | 0.408058 | 3_3:-64208259 | Msa0464350:CDS |
| AAATAAACTCCAGGAGAGTC+TGG | 0.422863 | 3_3:-64207792 | Msa0464350:CDS |
| TGAGCTCTTCGTTCCGCCTA+TGG | 0.423220 | 3_3:+64208218 | None:intergenic |
| TGCAATTGGAGCTGGAGATT+GGG | 0.428890 | 3_3:-64208555 | Msa0464350:CDS |
| TCAGCTTCTGAATGATCCCT+TGG | 0.431043 | 3_3:+64209053 | None:intergenic |
| GTCCGAAGTGCAGCTTCGTC+TGG | 0.433393 | 3_3:-64208173 | Msa0464350:CDS |
| TTTCTTGGTGTTACATTACC+TGG | 0.438638 | 3_3:+64207672 | None:intergenic |
| CTAAATCCAATTGATAAAAG+TGG | 0.439900 | 3_3:+64209362 | None:intergenic |
| ATGGAACAAATGCCATGTCT+TGG | 0.464262 | 3_3:+64207768 | None:intergenic |
| GGTGACAGCTTTAAAGTTGA+AGG | 0.469579 | 3_3:-64209290 | Msa0464350:CDS |
| CCATTAAATGCAGCAAATCA+TGG | 0.469880 | 3_3:-64207749 | Msa0464350:CDS |
| TGTCTTGGACCAGACTCTCC+TGG | 0.474340 | 3_3:+64207783 | None:intergenic |
| CACATGCTAACTTGCTGGAA+TGG | 0.476844 | 3_3:+64209314 | None:intergenic |
| CACTACTAGCATGGAGAACA+AGG | 0.505528 | 3_3:-64209222 | Msa0464350:intron |
| GATTGGGAGAGCAAGAAAGC+AGG | 0.518438 | 3_3:-64208539 | Msa0464350:intron |
| TATTGCTATAGACAAATTTG+AGG | 0.520557 | 3_3:-64207714 | Msa0464350:CDS |
| TAGTTGCAGGGTATTTGCAC+AGG | 0.526630 | 3_3:-64208414 | Msa0464350:intron |
| GAAGCTCATGCAATTGGAGC+TGG | 0.532336 | 3_3:-64208563 | Msa0464350:CDS |
| GAGAGGCTGCTAAGAAAAGC+CGG | 0.533392 | 3_3:-64208868 | Msa0464350:CDS |
| AATGAAAACGGATGCTGCAA+AGG | 0.533573 | 3_3:-64208110 | Msa0464350:CDS |
| GATCCCCTCTATTTAATCTC+CGG | 0.535169 | 3_3:-64208085 | Msa0464350:CDS |
| AATTCTTAGCATCAATCAGA+AGG | 0.535444 | 3_3:-64209950 | Msa0464350:five_prime_UTR |
| TTACTGTTCACTAGTAACAT+TGG | 0.550321 | 3_3:+64209245 | None:intergenic |
| ATTGCTATAGACAAATTTGA+GGG | 0.550505 | 3_3:-64207713 | Msa0464350:CDS |
| CAGCCTCTCGATTCTGTGAG+AGG | 0.550635 | 3_3:+64208882 | None:intergenic |
| GACAAATTTGAGGGACTCGA+AGG | 0.552796 | 3_3:-64207704 | Msa0464350:CDS |
| ACACACCGGAGATTAAATAG+AGG | 0.563190 | 3_3:+64208080 | None:intergenic |
| ATTGGGTTGACGAGAACCAT+AGG | 0.567572 | 3_3:-64208234 | Msa0464350:CDS |
| TCTATTTAATCTCCGGTGTG+TGG | 0.577155 | 3_3:-64208078 | Msa0464350:CDS |
| TCAGACAAAGGCTCAAGTTG+TGG | 0.581334 | 3_3:+64207887 | None:intergenic |
| CACACCGGAGATTAAATAGA+GGG | 0.585253 | 3_3:+64208081 | None:intergenic |
| GAATGATCCCTTGGTTCATG+AGG | 0.586065 | 3_3:+64209062 | None:intergenic |
| CATTCCAGCAAGTTAGCATG+TGG | 0.586492 | 3_3:-64209313 | Msa0464350:CDS |
| AGAGGCTGCTAAGAAAAGCC+GGG | 0.588682 | 3_3:-64208867 | Msa0464350:CDS |
| ACAAGGACTAAATAAACTCC+AGG | 0.589120 | 3_3:-64207801 | Msa0464350:CDS |
| GAACAGTAACACTACTAGCA+TGG | 0.589169 | 3_3:-64209231 | Msa0464350:CDS |
| GAGTGTCTTGAATCATTACT+CGG | 0.593826 | 3_3:-64208143 | Msa0464350:CDS |
| TTCCAGCAAGTTAGCATGTG+GGG | 0.599412 | 3_3:-64209311 | Msa0464350:CDS |
| AACCAGACGAAGCTGCACTT+CGG | 0.601003 | 3_3:+64208171 | None:intergenic |
| GCCGAAGATGCTCTTTCACA+AGG | 0.601136 | 3_3:-64207818 | Msa0464350:CDS |
| AATATATTCCTCATGAACCA+AGG | 0.603855 | 3_3:-64209070 | Msa0464350:CDS |
| AACATTTGTTCATCAGACAA+AGG | 0.607845 | 3_3:+64207875 | None:intergenic |
| GGAGAGTCTGGTCCAAGACA+TGG | 0.608703 | 3_3:-64207780 | Msa0464350:CDS |
| AGCAAATCATGGAATTCAGA+TGG | 0.610088 | 3_3:-64207738 | Msa0464350:CDS |
| TACGGATGGTTTCCACACAC+CGG | 0.623678 | 3_3:+64208066 | None:intergenic |
| ATTCTTAGCATCAATCAGAA+GGG | 0.626123 | 3_3:-64209949 | Msa0464350:five_prime_UTR |
| ATATATTCCTCATGAACCAA+GGG | 0.628071 | 3_3:-64209069 | Msa0464350:CDS |
| GACAGCTTTAAAGTTGAAGG+TGG | 0.628685 | 3_3:-64209287 | Msa0464350:CDS |
| ATTCCAGCAAGTTAGCATGT+GGG | 0.642837 | 3_3:-64209312 | Msa0464350:CDS |
| TCATCTGAAACAATTAACCC+AGG | 0.648000 | 3_3:-64208363 | Msa0464350:intron |
| ACGCCTCTCACAGAATCGAG+AGG | 0.691290 | 3_3:-64208885 | Msa0464350:CDS |
| ACACCGGAGATTAAATAGAG+GGG | 0.728769 | 3_3:+64208082 | None:intergenic |
| GGGTTGACGAGAACCATAGG+CGG | 0.739081 | 3_3:-64208231 | Msa0464350:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTCAATATTATTTATTATC+AGG | - | chr3_3:64208312-64208331 | Msa0464350:intron | 10.0% |
| !! | TTTCAATATTATTTATTATC+AGG | - | chr3_3:64208312-64208331 | Msa0464350:intron | 10.0% |
| !! | AACTATATATGTATTTAGTT+TGG | - | chr3_3:64207880-64207899 | Msa0464350:CDS | 15.0% |
| !!! | TTATCTCTTGATTTATTTTA+AGG | - | chr3_3:64208095-64208114 | Msa0464350:CDS | 15.0% |
| !! | AAGGTAATATAATTACTTAT+AGG | - | chr3_3:64208870-64208889 | Msa0464350:CDS | 15.0% |
| !! | AACTATATATGTATTTAGTT+TGG | - | chr3_3:64207880-64207899 | Msa0464350:CDS | 15.0% |
| !!! | TTATCTCTTGATTTATTTTA+AGG | - | chr3_3:64208095-64208114 | Msa0464350:CDS | 15.0% |
| !! | AAGGTAATATAATTACTTAT+AGG | - | chr3_3:64208870-64208889 | Msa0464350:CDS | 15.0% |
| !! | ATTTGATAGAATGAATATGT+TGG | - | chr3_3:64208029-64208048 | Msa0464350:intron | 20.0% |
| !!! | ATTTGTAACTTTTTGAGTAA+TGG | - | chr3_3:64208131-64208150 | Msa0464350:CDS | 20.0% |
| !! | CAAAATGACTAAAACAATTT+AGG | - | chr3_3:64208162-64208181 | Msa0464350:CDS | 20.0% |
| !!! | AAAATTCCACTTTTATCAAT+TGG | - | chr3_3:64208338-64208357 | Msa0464350:intron | 20.0% |
| !!! | GTTTTATCACAAAACATTTT+TGG | + | chr3_3:64208748-64208767 | None:intergenic | 20.0% |
| !!! | AAATGTTTTGTGATAAAACA+TGG | - | chr3_3:64208749-64208768 | Msa0464350:intron | 20.0% |
| !!! | GGTAAATAAATTGTTAGTTT+TGG | + | chr3_3:64209197-64209216 | None:intergenic | 20.0% |
| !! | TAGCGAATTAGATTAAAAAT+TGG | - | chr3_3:64209731-64209750 | Msa0464350:intron | 20.0% |
| !! | ATTTGATAGAATGAATATGT+TGG | - | chr3_3:64208029-64208048 | Msa0464350:intron | 20.0% |
| !!! | ATTTGTAACTTTTTGAGTAA+TGG | - | chr3_3:64208131-64208150 | Msa0464350:CDS | 20.0% |
| !! | CAAAATGACTAAAACAATTT+AGG | - | chr3_3:64208162-64208181 | Msa0464350:CDS | 20.0% |
| !!! | AAAATTCCACTTTTATCAAT+TGG | - | chr3_3:64208338-64208357 | Msa0464350:intron | 20.0% |
| !!! | GTTTTATCACAAAACATTTT+TGG | + | chr3_3:64208748-64208767 | None:intergenic | 20.0% |
| !!! | AAATGTTTTGTGATAAAACA+TGG | - | chr3_3:64208749-64208768 | Msa0464350:intron | 20.0% |
| !!! | GGTAAATAAATTGTTAGTTT+TGG | + | chr3_3:64209197-64209216 | None:intergenic | 20.0% |
| !! | TAGCGAATTAGATTAAAAAT+TGG | - | chr3_3:64209731-64209750 | Msa0464350:intron | 20.0% |
| !! | CTTAGATTAACCAAATTTTG+AGG | - | chr3_3:64207789-64207808 | Msa0464350:CDS | 25.0% |
| !!! | GAATTTTTAGCCTCAAAATT+TGG | + | chr3_3:64207802-64207821 | None:intergenic | 25.0% |
| !! | ATATATAGTTCTACTAGAGA+AGG | + | chr3_3:64207870-64207889 | None:intergenic | 25.0% |
| ! | CTCAAATAAGCTATGTAAAT+TGG | + | chr3_3:64207915-64207934 | None:intergenic | 25.0% |
| !!! | TAGAATGAATATGTTGGTTT+TGG | - | chr3_3:64208035-64208054 | Msa0464350:intron | 25.0% |
| !!! | TCTCTTGATTTATTTTAAGG+AGG | - | chr3_3:64208098-64208117 | Msa0464350:CDS | 25.0% |
| !!! | TTGATTTATTTTAAGGAGGA+AGG | - | chr3_3:64208102-64208121 | Msa0464350:CDS | 25.0% |
| !!! | TGATTTATTTTAAGGAGGAA+GGG | - | chr3_3:64208103-64208122 | Msa0464350:CDS | 25.0% |
| ! | CTAAATCCAATTGATAAAAG+TGG | + | chr3_3:64208347-64208366 | None:intergenic | 25.0% |
| ! | TAGTTAGTTAGTTAGTTAGT+TGG | + | chr3_3:64209028-64209047 | None:intergenic | 25.0% |
| ! | AAGCATATGTTTCATATTTG+TGG | + | chr3_3:64209079-64209098 | None:intergenic | 25.0% |
| ! | ATATAAATCAGAAGTGAAGA+TGG | + | chr3_3:64209218-64209237 | None:intergenic | 25.0% |
| ! | AAAATTTCTACTTTAGTTGC+AGG | - | chr3_3:64209279-64209298 | Msa0464350:CDS | 25.0% |
| ! | AAATTTCTACTTTAGTTGCA+GGG | - | chr3_3:64209280-64209299 | Msa0464350:CDS | 25.0% |
| ! | TTGAAATTGAATACGGAAAT+TGG | - | chr3_3:64209454-64209473 | Msa0464350:intron | 25.0% |
| ! | TGAAATTGAATACGGAAATT+GGG | - | chr3_3:64209455-64209474 | Msa0464350:intron | 25.0% |
| ! | TATTGCTATAGACAAATTTG+AGG | - | chr3_3:64209992-64210011 | Msa0464350:five_prime_UTR | 25.0% |
| ! | ATTGCTATAGACAAATTTGA+GGG | - | chr3_3:64209993-64210012 | Msa0464350:five_prime_UTR | 25.0% |
| !! | CTTAGATTAACCAAATTTTG+AGG | - | chr3_3:64207789-64207808 | Msa0464350:CDS | 25.0% |
| !!! | GAATTTTTAGCCTCAAAATT+TGG | + | chr3_3:64207802-64207821 | None:intergenic | 25.0% |
| !! | ATATATAGTTCTACTAGAGA+AGG | + | chr3_3:64207870-64207889 | None:intergenic | 25.0% |
| ! | CTCAAATAAGCTATGTAAAT+TGG | + | chr3_3:64207915-64207934 | None:intergenic | 25.0% |
| !!! | TAGAATGAATATGTTGGTTT+TGG | - | chr3_3:64208035-64208054 | Msa0464350:intron | 25.0% |
| !!! | TCTCTTGATTTATTTTAAGG+AGG | - | chr3_3:64208098-64208117 | Msa0464350:CDS | 25.0% |
| !!! | TTGATTTATTTTAAGGAGGA+AGG | - | chr3_3:64208102-64208121 | Msa0464350:CDS | 25.0% |
| !!! | TGATTTATTTTAAGGAGGAA+GGG | - | chr3_3:64208103-64208122 | Msa0464350:CDS | 25.0% |
| ! | CTAAATCCAATTGATAAAAG+TGG | + | chr3_3:64208347-64208366 | None:intergenic | 25.0% |
| ! | TAGTTAGTTAGTTAGTTAGT+TGG | + | chr3_3:64209028-64209047 | None:intergenic | 25.0% |
| ! | AAGCATATGTTTCATATTTG+TGG | + | chr3_3:64209079-64209098 | None:intergenic | 25.0% |
| ! | ATATAAATCAGAAGTGAAGA+TGG | + | chr3_3:64209218-64209237 | None:intergenic | 25.0% |
| ! | AAAATTTCTACTTTAGTTGC+AGG | - | chr3_3:64209279-64209298 | Msa0464350:CDS | 25.0% |
| ! | AAATTTCTACTTTAGTTGCA+GGG | - | chr3_3:64209280-64209299 | Msa0464350:CDS | 25.0% |
| ! | TTGAAATTGAATACGGAAAT+TGG | - | chr3_3:64209454-64209473 | Msa0464350:intron | 25.0% |
| ! | TGAAATTGAATACGGAAATT+GGG | - | chr3_3:64209455-64209474 | Msa0464350:intron | 25.0% |
| ! | TATTGCTATAGACAAATTTG+AGG | - | chr3_3:64209992-64210011 | Msa0464350:five_prime_UTR | 25.0% |
| ! | ATTGCTATAGACAAATTTGA+GGG | - | chr3_3:64209993-64210012 | Msa0464350:five_prime_UTR | 25.0% |
| AATTCTTAGCATCAATCAGA+AGG | - | chr3_3:64207756-64207775 | Msa0464350:CDS | 30.0% | |
| ATTCTTAGCATCAATCAGAA+GGG | - | chr3_3:64207757-64207776 | Msa0464350:CDS | 30.0% | |
| GTTAGCATAGCAATCTATAT+AGG | - | chr3_3:64207828-64207847 | Msa0464350:CDS | 30.0% | |
| AAGCTATGTAAATTGGCAAT+TGG | + | chr3_3:64207908-64207927 | None:intergenic | 30.0% | |
| !!! | GATTTATTTTAAGGAGGAAG+GGG | - | chr3_3:64208104-64208123 | Msa0464350:CDS | 30.0% |
| !!! | ATTTATTTTAAGGAGGAAGG+GGG | - | chr3_3:64208105-64208124 | Msa0464350:CDS | 30.0% |
| !!! | CTTTTTTAAGATTCGAGCTT+TGG | - | chr3_3:64208204-64208223 | Msa0464350:CDS | 30.0% |
| ACTACCAAACAATAGACTTA+TGG | + | chr3_3:64208272-64208291 | None:intergenic | 30.0% | |
| TGGATTTAGTGAGAGATTAA+TGG | - | chr3_3:64208358-64208377 | Msa0464350:intron | 30.0% | |
| TTACTGTTCACTAGTAACAT+TGG | + | chr3_3:64208464-64208483 | None:intergenic | 30.0% | |
| AATATATTCCTCATGAACCA+AGG | - | chr3_3:64208636-64208655 | Msa0464350:intron | 30.0% | |
| ATATATTCCTCATGAACCAA+GGG | - | chr3_3:64208637-64208656 | Msa0464350:intron | 30.0% | |
| ACAAGAGACTACAAACAATA+AGG | - | chr3_3:64208676-64208695 | Msa0464350:intron | 30.0% | |
| ! | TGTTCCTTTGTTGTGTAAAA+CGG | - | chr3_3:64208908-64208927 | Msa0464350:intron | 30.0% |
| !! | ACTGTTCTATTGAGTTGAAT+GGG | + | chr3_3:64208962-64208981 | None:intergenic | 30.0% |
| !! | AACTGTTCTATTGAGTTGAA+TGG | + | chr3_3:64208963-64208982 | None:intergenic | 30.0% |
| ATATCAAGAATCACAAACCT+GGG | + | chr3_3:64209363-64209382 | None:intergenic | 30.0% | |
| ! | GTTGCGTTTGAAATTGAATA+CGG | - | chr3_3:64209447-64209466 | Msa0464350:intron | 30.0% |
| ! | GGATCTTTTCAGAATGAAAA+CGG | - | chr3_3:64209584-64209603 | Msa0464350:intron | 30.0% |
| GTACATTTAGAAGTTGTGAT+GGG | + | chr3_3:64209697-64209716 | None:intergenic | 30.0% | |
| TGTACATTTAGAAGTTGTGA+TGG | + | chr3_3:64209698-64209717 | None:intergenic | 30.0% | |
| TAATGATTAGTGATTCGTTG+AGG | + | chr3_3:64209768-64209787 | None:intergenic | 30.0% | |
| AACATTTGTTCATCAGACAA+AGG | + | chr3_3:64209834-64209853 | None:intergenic | 30.0% | |
| TTTGTAATCCAGGTAATGTA+AGG | - | chr3_3:64210026-64210045 | Msa0464350:five_prime_UTR | 30.0% | |
| AATTCTTAGCATCAATCAGA+AGG | - | chr3_3:64207756-64207775 | Msa0464350:CDS | 30.0% | |
| ATTCTTAGCATCAATCAGAA+GGG | - | chr3_3:64207757-64207776 | Msa0464350:CDS | 30.0% | |
| GTTAGCATAGCAATCTATAT+AGG | - | chr3_3:64207828-64207847 | Msa0464350:CDS | 30.0% | |
| AAGCTATGTAAATTGGCAAT+TGG | + | chr3_3:64207908-64207927 | None:intergenic | 30.0% | |
| !!! | GATTTATTTTAAGGAGGAAG+GGG | - | chr3_3:64208104-64208123 | Msa0464350:CDS | 30.0% |
| !!! | ATTTATTTTAAGGAGGAAGG+GGG | - | chr3_3:64208105-64208124 | Msa0464350:CDS | 30.0% |
| !!! | CTTTTTTAAGATTCGAGCTT+TGG | - | chr3_3:64208204-64208223 | Msa0464350:CDS | 30.0% |
| ACTACCAAACAATAGACTTA+TGG | + | chr3_3:64208272-64208291 | None:intergenic | 30.0% | |
| TGGATTTAGTGAGAGATTAA+TGG | - | chr3_3:64208358-64208377 | Msa0464350:intron | 30.0% | |
| TTACTGTTCACTAGTAACAT+TGG | + | chr3_3:64208464-64208483 | None:intergenic | 30.0% | |
| AATATATTCCTCATGAACCA+AGG | - | chr3_3:64208636-64208655 | Msa0464350:intron | 30.0% | |
| ATATATTCCTCATGAACCAA+GGG | - | chr3_3:64208637-64208656 | Msa0464350:intron | 30.0% | |
| ACAAGAGACTACAAACAATA+AGG | - | chr3_3:64208676-64208695 | Msa0464350:intron | 30.0% | |
| ! | TGTTCCTTTGTTGTGTAAAA+CGG | - | chr3_3:64208908-64208927 | Msa0464350:intron | 30.0% |
| !! | ACTGTTCTATTGAGTTGAAT+GGG | + | chr3_3:64208962-64208981 | None:intergenic | 30.0% |
| !! | AACTGTTCTATTGAGTTGAA+TGG | + | chr3_3:64208963-64208982 | None:intergenic | 30.0% |
| ATATCAAGAATCACAAACCT+GGG | + | chr3_3:64209363-64209382 | None:intergenic | 30.0% | |
| ! | GTTGCGTTTGAAATTGAATA+CGG | - | chr3_3:64209447-64209466 | Msa0464350:intron | 30.0% |
| ! | GGATCTTTTCAGAATGAAAA+CGG | - | chr3_3:64209584-64209603 | Msa0464350:intron | 30.0% |
| GTACATTTAGAAGTTGTGAT+GGG | + | chr3_3:64209697-64209716 | None:intergenic | 30.0% | |
| TGTACATTTAGAAGTTGTGA+TGG | + | chr3_3:64209698-64209717 | None:intergenic | 30.0% | |
| TAATGATTAGTGATTCGTTG+AGG | + | chr3_3:64209768-64209787 | None:intergenic | 30.0% | |
| AACATTTGTTCATCAGACAA+AGG | + | chr3_3:64209834-64209853 | None:intergenic | 30.0% | |
| TGAGTGTGGTTGTTTATTTC+TGG | - | chr3_3:64207951-64207970 | Msa0464350:intron | 35.0% | |
| GAGACCATAAGTCTATTGTT+TGG | - | chr3_3:64208265-64208284 | Msa0464350:CDS | 35.0% | |
| AGAGTCTGACTCATTTAATG+TGG | - | chr3_3:64208567-64208586 | Msa0464350:CDS | 35.0% | |
| ! | TCAACCGTTTTACACAACAA+AGG | + | chr3_3:64208915-64208934 | None:intergenic | 35.0% |
| ! | TTTGTTGTGTAAAACGGTTG+AGG | - | chr3_3:64208914-64208933 | Msa0464350:intron | 35.0% |
| GGTTGAGGAAATGAAAATTG+AGG | - | chr3_3:64208929-64208948 | Msa0464350:intron | 35.0% | |
| ACATATGCTTGATATTGTGC+AGG | - | chr3_3:64209089-64209108 | Msa0464350:intron | 35.0% | |
| !! | GCCTTAGATACCAGTTTTAT+GGG | - | chr3_3:64209319-64209338 | Msa0464350:CDS | 35.0% |
| TCCCATAAAACTGGTATCTA+AGG | + | chr3_3:64209323-64209342 | None:intergenic | 35.0% | |
| TTCAGATGATCCCATAAAAC+TGG | + | chr3_3:64209332-64209351 | None:intergenic | 35.0% | |
| ! | TCATCTGAAACAATTAACCC+AGG | - | chr3_3:64209343-64209362 | Msa0464350:exon | 35.0% |
| GATATCAAGAATCACAAACC+TGG | + | chr3_3:64209364-64209383 | None:intergenic | 35.0% | |
| ATCTTTGTGTTCTGTTAACC+AGG | - | chr3_3:64209420-64209439 | Msa0464350:intron | 35.0% | |
| TCTTTGTGTTCTGTTAACCA+GGG | - | chr3_3:64209421-64209440 | Msa0464350:intron | 35.0% | |
| GAGTGTCTTGAATCATTACT+CGG | - | chr3_3:64209563-64209582 | Msa0464350:intron | 35.0% | |
| ACAAGGACTAAATAAACTCC+AGG | - | chr3_3:64209905-64209924 | Msa0464350:five_prime_UTR | 35.0% | |
| !! | CCATGATTTGCTGCATTTAA+TGG | + | chr3_3:64209960-64209979 | None:intergenic | 35.0% |
| CCATTAAATGCAGCAAATCA+TGG | - | chr3_3:64209957-64209976 | Msa0464350:five_prime_UTR | 35.0% | |
| AGCAAATCATGGAATTCAGA+TGG | - | chr3_3:64209968-64209987 | Msa0464350:five_prime_UTR | 35.0% | |
| TGAGTGTGGTTGTTTATTTC+TGG | - | chr3_3:64207951-64207970 | Msa0464350:intron | 35.0% | |
| GAGACCATAAGTCTATTGTT+TGG | - | chr3_3:64208265-64208284 | Msa0464350:CDS | 35.0% | |
| AGAGTCTGACTCATTTAATG+TGG | - | chr3_3:64208567-64208586 | Msa0464350:CDS | 35.0% | |
| ! | TCAACCGTTTTACACAACAA+AGG | + | chr3_3:64208915-64208934 | None:intergenic | 35.0% |
| ! | TTTGTTGTGTAAAACGGTTG+AGG | - | chr3_3:64208914-64208933 | Msa0464350:intron | 35.0% |
| GGTTGAGGAAATGAAAATTG+AGG | - | chr3_3:64208929-64208948 | Msa0464350:intron | 35.0% | |
| ACATATGCTTGATATTGTGC+AGG | - | chr3_3:64209089-64209108 | Msa0464350:intron | 35.0% | |
| !! | GCCTTAGATACCAGTTTTAT+GGG | - | chr3_3:64209319-64209338 | Msa0464350:CDS | 35.0% |
| TCCCATAAAACTGGTATCTA+AGG | + | chr3_3:64209323-64209342 | None:intergenic | 35.0% | |
| TTCAGATGATCCCATAAAAC+TGG | + | chr3_3:64209332-64209351 | None:intergenic | 35.0% | |
| ! | TCATCTGAAACAATTAACCC+AGG | - | chr3_3:64209343-64209362 | Msa0464350:exon | 35.0% |
| GATATCAAGAATCACAAACC+TGG | + | chr3_3:64209364-64209383 | None:intergenic | 35.0% | |
| ATCTTTGTGTTCTGTTAACC+AGG | - | chr3_3:64209420-64209439 | Msa0464350:intron | 35.0% | |
| TCTTTGTGTTCTGTTAACCA+GGG | - | chr3_3:64209421-64209440 | Msa0464350:intron | 35.0% | |
| GAGTGTCTTGAATCATTACT+CGG | - | chr3_3:64209563-64209582 | Msa0464350:intron | 35.0% | |
| ACAAGGACTAAATAAACTCC+AGG | - | chr3_3:64209905-64209924 | Msa0464350:five_prime_UTR | 35.0% | |
| !! | CCATGATTTGCTGCATTTAA+TGG | + | chr3_3:64209960-64209979 | None:intergenic | 35.0% |
| CCATTAAATGCAGCAAATCA+TGG | - | chr3_3:64209957-64209976 | Msa0464350:five_prime_UTR | 35.0% | |
| AGCAAATCATGGAATTCAGA+TGG | - | chr3_3:64209968-64209987 | Msa0464350:five_prime_UTR | 35.0% | |
| AGCTTATTTGAGCAGAAGCT+TGG | - | chr3_3:64207923-64207942 | Msa0464350:intron | 40.0% | |
| ATTCCAGCAAGTTAGCATGT+GGG | - | chr3_3:64208394-64208413 | Msa0464350:CDS | 40.0% | |
| !! | GGTGACAGCTTTAAAGTTGA+AGG | - | chr3_3:64208416-64208435 | Msa0464350:intron | 40.0% |
| !! | GACAGCTTTAAAGTTGAAGG+TGG | - | chr3_3:64208419-64208438 | Msa0464350:intron | 40.0% |
| GAACAGTAACACTACTAGCA+TGG | - | chr3_3:64208475-64208494 | Msa0464350:intron | 40.0% | |
| GTGTCTGTGACATTATGTGT+AGG | - | chr3_3:64208791-64208810 | Msa0464350:intron | 40.0% | |
| ! | ATATTACCTTTTTGCGCTCC+CGG | + | chr3_3:64208860-64208879 | None:intergenic | 40.0% |
| CAGATTGAAGCTCATGCAAT+TGG | - | chr3_3:64209137-64209156 | Msa0464350:intron | 40.0% | |
| ! | CGCCTTAGATACCAGTTTTA+TGG | - | chr3_3:64209318-64209337 | Msa0464350:CDS | 40.0% |
| ATTTCAAACGCAACAATCCC+TGG | + | chr3_3:64209441-64209460 | None:intergenic | 40.0% | |
| AATGAAAACGGATGCTGCAA+AGG | - | chr3_3:64209596-64209615 | Msa0464350:intron | 40.0% | |
| GATCCCCTCTATTTAATCTC+CGG | - | chr3_3:64209621-64209640 | Msa0464350:intron | 40.0% | |
| ACACCGGAGATTAAATAGAG+GGG | + | chr3_3:64209627-64209646 | None:intergenic | 40.0% | |
| CACACCGGAGATTAAATAGA+GGG | + | chr3_3:64209628-64209647 | None:intergenic | 40.0% | |
| ACACACCGGAGATTAAATAG+AGG | + | chr3_3:64209629-64209648 | None:intergenic | 40.0% | |
| TCTATTTAATCTCCGGTGTG+TGG | - | chr3_3:64209628-64209647 | Msa0464350:intron | 40.0% | |
| !! | TCCTTGTGAAAGAGCATCTT+CGG | + | chr3_3:64209892-64209911 | None:intergenic | 40.0% |
| AAATAAACTCCAGGAGAGTC+TGG | - | chr3_3:64209914-64209933 | Msa0464350:five_prime_UTR | 40.0% | |
| ATGGAACAAATGCCATGTCT+TGG | + | chr3_3:64209941-64209960 | None:intergenic | 40.0% | |
| !! | ACTCGAAGGTTTTGTAATCC+AGG | - | chr3_3:64210016-64210035 | Msa0464350:five_prime_UTR | 40.0% |
| AGCTTATTTGAGCAGAAGCT+TGG | - | chr3_3:64207923-64207942 | Msa0464350:intron | 40.0% | |
| ATTCCAGCAAGTTAGCATGT+GGG | - | chr3_3:64208394-64208413 | Msa0464350:CDS | 40.0% | |
| !! | GGTGACAGCTTTAAAGTTGA+AGG | - | chr3_3:64208416-64208435 | Msa0464350:intron | 40.0% |
| !! | GACAGCTTTAAAGTTGAAGG+TGG | - | chr3_3:64208419-64208438 | Msa0464350:intron | 40.0% |
| GAACAGTAACACTACTAGCA+TGG | - | chr3_3:64208475-64208494 | Msa0464350:intron | 40.0% | |
| GTGTCTGTGACATTATGTGT+AGG | - | chr3_3:64208791-64208810 | Msa0464350:intron | 40.0% | |
| ! | ATATTACCTTTTTGCGCTCC+CGG | + | chr3_3:64208860-64208879 | None:intergenic | 40.0% |
| CAGATTGAAGCTCATGCAAT+TGG | - | chr3_3:64209137-64209156 | Msa0464350:intron | 40.0% | |
| ! | CGCCTTAGATACCAGTTTTA+TGG | - | chr3_3:64209318-64209337 | Msa0464350:CDS | 40.0% |
| ATTTCAAACGCAACAATCCC+TGG | + | chr3_3:64209441-64209460 | None:intergenic | 40.0% | |
| AATGAAAACGGATGCTGCAA+AGG | - | chr3_3:64209596-64209615 | Msa0464350:intron | 40.0% | |
| GATCCCCTCTATTTAATCTC+CGG | - | chr3_3:64209621-64209640 | Msa0464350:intron | 40.0% | |
| ACACCGGAGATTAAATAGAG+GGG | + | chr3_3:64209627-64209646 | None:intergenic | 40.0% | |
| CACACCGGAGATTAAATAGA+GGG | + | chr3_3:64209628-64209647 | None:intergenic | 40.0% | |
| ACACACCGGAGATTAAATAG+AGG | + | chr3_3:64209629-64209648 | None:intergenic | 40.0% | |
| TCTATTTAATCTCCGGTGTG+TGG | - | chr3_3:64209628-64209647 | Msa0464350:intron | 40.0% | |
| !! | TCCTTGTGAAAGAGCATCTT+CGG | + | chr3_3:64209892-64209911 | None:intergenic | 40.0% |
| AAATAAACTCCAGGAGAGTC+TGG | - | chr3_3:64209914-64209933 | Msa0464350:five_prime_UTR | 40.0% | |
| ATGGAACAAATGCCATGTCT+TGG | + | chr3_3:64209941-64209960 | None:intergenic | 40.0% | |
| !! | ACTCGAAGGTTTTGTAATCC+AGG | - | chr3_3:64210016-64210035 | Msa0464350:five_prime_UTR | 40.0% |
| !! | CACATGCTAACTTGCTGGAA+TGG | + | chr3_3:64208395-64208414 | None:intergenic | 45.0% |
| CATTCCAGCAAGTTAGCATG+TGG | - | chr3_3:64208393-64208412 | Msa0464350:CDS | 45.0% | |
| TTCCAGCAAGTTAGCATGTG+GGG | - | chr3_3:64208395-64208414 | Msa0464350:CDS | 45.0% | |
| CACTACTAGCATGGAGAACA+AGG | - | chr3_3:64208484-64208503 | Msa0464350:intron | 45.0% | |
| GAATGATCCCTTGGTTCATG+AGG | + | chr3_3:64208647-64208666 | None:intergenic | 45.0% | |
| TCAGCTTCTGAATGATCCCT+TGG | + | chr3_3:64208656-64208675 | None:intergenic | 45.0% | |
| ATGCAATTGGAGCTGGAGAT+TGG | - | chr3_3:64209150-64209169 | Msa0464350:intron | 45.0% | |
| TGCAATTGGAGCTGGAGATT+GGG | - | chr3_3:64209151-64209170 | Msa0464350:intron | 45.0% | |
| ! | TAGTTGCAGGGTATTTGCAC+AGG | - | chr3_3:64209292-64209311 | Msa0464350:CDS | 45.0% |
| !! | ATTGGGTTGACGAGAACCAT+AGG | - | chr3_3:64209472-64209491 | Msa0464350:intron | 45.0% |
| ! | TCAGACAAAGGCTCAAGTTG+TGG | + | chr3_3:64209822-64209841 | None:intergenic | 45.0% |
| GACAAATTTGAGGGACTCGA+AGG | - | chr3_3:64210002-64210021 | Msa0464350:five_prime_UTR | 45.0% | |
| !! | CACATGCTAACTTGCTGGAA+TGG | + | chr3_3:64208395-64208414 | None:intergenic | 45.0% |
| CATTCCAGCAAGTTAGCATG+TGG | - | chr3_3:64208393-64208412 | Msa0464350:CDS | 45.0% | |
| TTCCAGCAAGTTAGCATGTG+GGG | - | chr3_3:64208395-64208414 | Msa0464350:CDS | 45.0% | |
| CACTACTAGCATGGAGAACA+AGG | - | chr3_3:64208484-64208503 | Msa0464350:intron | 45.0% | |
| GAATGATCCCTTGGTTCATG+AGG | + | chr3_3:64208647-64208666 | None:intergenic | 45.0% | |
| TCAGCTTCTGAATGATCCCT+TGG | + | chr3_3:64208656-64208675 | None:intergenic | 45.0% | |
| ATGCAATTGGAGCTGGAGAT+TGG | - | chr3_3:64209150-64209169 | Msa0464350:intron | 45.0% | |
| TGCAATTGGAGCTGGAGATT+GGG | - | chr3_3:64209151-64209170 | Msa0464350:intron | 45.0% | |
| ! | TAGTTGCAGGGTATTTGCAC+AGG | - | chr3_3:64209292-64209311 | Msa0464350:CDS | 45.0% |
| !! | ATTGGGTTGACGAGAACCAT+AGG | - | chr3_3:64209472-64209491 | Msa0464350:intron | 45.0% |
| ! | TCAGACAAAGGCTCAAGTTG+TGG | + | chr3_3:64209822-64209841 | None:intergenic | 45.0% |
| GACAAATTTGAGGGACTCGA+AGG | - | chr3_3:64210002-64210021 | Msa0464350:five_prime_UTR | 45.0% | |
| !! | TTGAATATATATATATATAA+TGG | + | chr3_3:64207738-64207757 | None:intergenic | 5.0% |
| !! | TTGAATATATATATATATAA+TGG | + | chr3_3:64207738-64207757 | None:intergenic | 5.0% |
| GAAGCTTGGTCTCATGAGTG+TGG | - | chr3_3:64207937-64207956 | Msa0464350:intron | 50.0% | |
| GAGAGGCTGCTAAGAAAAGC+CGG | - | chr3_3:64208838-64208857 | Msa0464350:intron | 50.0% | |
| AGAGGCTGCTAAGAAAAGCC+GGG | - | chr3_3:64208839-64208858 | Msa0464350:intron | 50.0% | |
| GAAGCTCATGCAATTGGAGC+TGG | - | chr3_3:64209143-64209162 | Msa0464350:intron | 50.0% | |
| GATTGGGAGAGCAAGAAAGC+AGG | - | chr3_3:64209167-64209186 | Msa0464350:intron | 50.0% | |
| AACCAGACGAAGCTGCACTT+CGG | + | chr3_3:64209538-64209557 | None:intergenic | 50.0% | |
| TACGGATGGTTTCCACACAC+CGG | + | chr3_3:64209643-64209662 | None:intergenic | 50.0% | |
| !! | TCCATAGGAAAGGCGCTCTA+CGG | + | chr3_3:64209661-64209680 | None:intergenic | 50.0% |
| ! | AGAGCGCCTTTCCTATGGAT+CGG | - | chr3_3:64209662-64209681 | Msa0464350:intron | 50.0% |
| GATCCTCCGATCCATAGGAA+AGG | + | chr3_3:64209671-64209690 | None:intergenic | 50.0% | |
| GTTGTGGCACAATGAGCTGT+AGG | + | chr3_3:64209806-64209825 | None:intergenic | 50.0% | |
| GCCGAAGATGCTCTTTCACA+AGG | - | chr3_3:64209888-64209907 | Msa0464350:five_prime_UTR | 50.0% | |
| GAAGCTTGGTCTCATGAGTG+TGG | - | chr3_3:64207937-64207956 | Msa0464350:intron | 50.0% | |
| GAGAGGCTGCTAAGAAAAGC+CGG | - | chr3_3:64208838-64208857 | Msa0464350:intron | 50.0% | |
| AGAGGCTGCTAAGAAAAGCC+GGG | - | chr3_3:64208839-64208858 | Msa0464350:intron | 50.0% | |
| GAAGCTCATGCAATTGGAGC+TGG | - | chr3_3:64209143-64209162 | Msa0464350:intron | 50.0% | |
| GATTGGGAGAGCAAGAAAGC+AGG | - | chr3_3:64209167-64209186 | Msa0464350:intron | 50.0% | |
| AACCAGACGAAGCTGCACTT+CGG | + | chr3_3:64209538-64209557 | None:intergenic | 50.0% | |
| TACGGATGGTTTCCACACAC+CGG | + | chr3_3:64209643-64209662 | None:intergenic | 50.0% | |
| !! | TCCATAGGAAAGGCGCTCTA+CGG | + | chr3_3:64209661-64209680 | None:intergenic | 50.0% |
| ! | AGAGCGCCTTTCCTATGGAT+CGG | - | chr3_3:64209662-64209681 | Msa0464350:intron | 50.0% |
| GATCCTCCGATCCATAGGAA+AGG | + | chr3_3:64209671-64209690 | None:intergenic | 50.0% | |
| GTTGTGGCACAATGAGCTGT+AGG | + | chr3_3:64209806-64209825 | None:intergenic | 50.0% | |
| GCCGAAGATGCTCTTTCACA+AGG | - | chr3_3:64209888-64209907 | Msa0464350:five_prime_UTR | 50.0% | |
| ! | CACCCCACATGCTAACTTGC+TGG | + | chr3_3:64208400-64208419 | None:intergenic | 55.0% |
| ACGCCTCTCACAGAATCGAG+AGG | - | chr3_3:64208821-64208840 | Msa0464350:intron | 55.0% | |
| CAGCCTCTCGATTCTGTGAG+AGG | + | chr3_3:64208827-64208846 | None:intergenic | 55.0% | |
| ! | GAAAAGCCGGGAGCGCAAAA+AGG | - | chr3_3:64208851-64208870 | Msa0464350:intron | 55.0% |
| GGGTTGACGAGAACCATAGG+CGG | - | chr3_3:64209475-64209494 | Msa0464350:intron | 55.0% | |
| TGAGCTCTTCGTTCCGCCTA+TGG | + | chr3_3:64209491-64209510 | None:intergenic | 55.0% | |
| !! | TAGGAAAGGCGCTCTACGGA+TGG | + | chr3_3:64209657-64209676 | None:intergenic | 55.0% |
| ! | TCCGTAGAGCGCCTTTCCTA+TGG | - | chr3_3:64209657-64209676 | Msa0464350:intron | 55.0% |
| GTGGCACAATGAGCTGTAGG+AGG | + | chr3_3:64209803-64209822 | None:intergenic | 55.0% | |
| TGTCTTGGACCAGACTCTCC+TGG | + | chr3_3:64209926-64209945 | None:intergenic | 55.0% | |
| GGAGAGTCTGGTCCAAGACA+TGG | - | chr3_3:64209926-64209945 | Msa0464350:five_prime_UTR | 55.0% | |
| ! | CACCCCACATGCTAACTTGC+TGG | + | chr3_3:64208400-64208419 | None:intergenic | 55.0% |
| ACGCCTCTCACAGAATCGAG+AGG | - | chr3_3:64208821-64208840 | Msa0464350:intron | 55.0% | |
| CAGCCTCTCGATTCTGTGAG+AGG | + | chr3_3:64208827-64208846 | None:intergenic | 55.0% | |
| ! | GAAAAGCCGGGAGCGCAAAA+AGG | - | chr3_3:64208851-64208870 | Msa0464350:intron | 55.0% |
| GGGTTGACGAGAACCATAGG+CGG | - | chr3_3:64209475-64209494 | Msa0464350:intron | 55.0% | |
| TGAGCTCTTCGTTCCGCCTA+TGG | + | chr3_3:64209491-64209510 | None:intergenic | 55.0% | |
| !! | TAGGAAAGGCGCTCTACGGA+TGG | + | chr3_3:64209657-64209676 | None:intergenic | 55.0% |
| ! | TCCGTAGAGCGCCTTTCCTA+TGG | - | chr3_3:64209657-64209676 | Msa0464350:intron | 55.0% |
| GTGGCACAATGAGCTGTAGG+AGG | + | chr3_3:64209803-64209822 | None:intergenic | 55.0% | |
| TGTCTTGGACCAGACTCTCC+TGG | + | chr3_3:64209926-64209945 | None:intergenic | 55.0% | |
| GGAGAGTCTGGTCCAAGACA+TGG | - | chr3_3:64209926-64209945 | Msa0464350:five_prime_UTR | 55.0% | |
| GTCCGAAGTGCAGCTTCGTC+TGG | - | chr3_3:64209533-64209552 | Msa0464350:intron | 60.0% | |
| GCGCCTTTCCTATGGATCGG+AGG | - | chr3_3:64209665-64209684 | Msa0464350:intron | 60.0% | |
| GGCGAGATCCTCCGATCCAT+AGG | + | chr3_3:64209676-64209695 | None:intergenic | 60.0% | |
| GTCCGAAGTGCAGCTTCGTC+TGG | - | chr3_3:64209533-64209552 | Msa0464350:intron | 60.0% | |
| GCGCCTTTCCTATGGATCGG+AGG | - | chr3_3:64209665-64209684 | Msa0464350:intron | 60.0% | |
| GGCGAGATCCTCCGATCCAT+AGG | + | chr3_3:64209676-64209695 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 64207682 | 64210046 | 64207682 | ID=Msa0464350;Name=Msa0464350 |
| chr3_3 | mRNA | 64207682 | 64210046 | 64207682 | ID=Msa0464350-mRNA-1;Parent=Msa0464350;Name=Msa0464350-mRNA-1;_AED=0.15;_eAED=0.15;_QI=211|0.85|0.75|1|0.85|0.75|8|0|283 |
| chr3_3 | exon | 64207682 | 64207918 | 64207682 | ID=Msa0464350-mRNA-1:exon:14106;Parent=Msa0464350-mRNA-1 |
| chr3_3 | exon | 64208069 | 64208286 | 64208069 | ID=Msa0464350-mRNA-1:exon:14105;Parent=Msa0464350-mRNA-1 |
| chr3_3 | exon | 64208364 | 64208427 | 64208364 | ID=Msa0464350-mRNA-1:exon:14104;Parent=Msa0464350-mRNA-1 |
| chr3_3 | exon | 64208540 | 64208617 | 64208540 | ID=Msa0464350-mRNA-1:exon:14103;Parent=Msa0464350-mRNA-1 |
| chr3_3 | exon | 64208856 | 64208915 | 64208856 | ID=Msa0464350-mRNA-1:exon:14102;Parent=Msa0464350-mRNA-1 |
| chr3_3 | exon | 64209031 | 64209096 | 64209031 | ID=Msa0464350-mRNA-1:exon:14101;Parent=Msa0464350-mRNA-1 |
| chr3_3 | exon | 64209223 | 64209394 | 64209223 | ID=Msa0464350-mRNA-1:exon:14100;Parent=Msa0464350-mRNA-1 |
| chr3_3 | exon | 64209879 | 64210046 | 64209879 | ID=Msa0464350-mRNA-1:exon:14099;Parent=Msa0464350-mRNA-1 |
| chr3_3 | five_prime_UTR | 64209879 | 64210046 | 64209879 | ID=Msa0464350-mRNA-1:five_prime_utr;Parent=Msa0464350-mRNA-1 |
| chr3_3 | five_prime_UTR | 64209352 | 64209394 | 64209352 | ID=Msa0464350-mRNA-1:five_prime_utr;Parent=Msa0464350-mRNA-1 |
| chr3_3 | CDS | 64209223 | 64209351 | 64209223 | ID=Msa0464350-mRNA-1:cds;Parent=Msa0464350-mRNA-1 |
| chr3_3 | CDS | 64209031 | 64209096 | 64209031 | ID=Msa0464350-mRNA-1:cds;Parent=Msa0464350-mRNA-1 |
| chr3_3 | CDS | 64208856 | 64208915 | 64208856 | ID=Msa0464350-mRNA-1:cds;Parent=Msa0464350-mRNA-1 |
| chr3_3 | CDS | 64208540 | 64208617 | 64208540 | ID=Msa0464350-mRNA-1:cds;Parent=Msa0464350-mRNA-1 |
| chr3_3 | CDS | 64208364 | 64208427 | 64208364 | ID=Msa0464350-mRNA-1:cds;Parent=Msa0464350-mRNA-1 |
| chr3_3 | CDS | 64208069 | 64208286 | 64208069 | ID=Msa0464350-mRNA-1:cds;Parent=Msa0464350-mRNA-1 |
| chr3_3 | CDS | 64207682 | 64207918 | 64207682 | ID=Msa0464350-mRNA-1:cds;Parent=Msa0464350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
