AlfalfaGEDB | Msa1342380

M. sativa cultivar zhongmu-4 / Msa1342380

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1342380	XP_003600473.1	85.616	146	15	2	1	144	1	142	9.97e-62	196

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1342380	sp\|F4IWB3\|SMR13_ARATH	61.111	54	21	0	88	141	50	103	1.36e-16	73.6

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1342380	G7J261	85.616	146	15	2	1	144	1	142	4.76e-62	196

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0000050	Msa1342380	0.822148	2.765545e-53	-8.615850e-47
Msa0010110	Msa1342380	0.811153	8.073773e-51	-8.615850e-47
Msa0028620	Msa1342380	0.820134	8.052898e-53	-8.615850e-47
Msa0030700	Msa1342380	0.809887	1.515514e-50	-8.615850e-47
Msa0032080	Msa1342380	0.809685	1.674222e-50	-8.615850e-47
Msa0043980	Msa1342380	0.806022	1.006524e-49	-8.615850e-47
Msa0072720	Msa1342380	0.801270	9.748466e-49	-8.615850e-47
Msa0074600	Msa1342380	0.806214	9.170425e-50	-8.615850e-47
Msa0079070	Msa1342380	0.813578	2.383811e-51	-8.615850e-47
Msa0079130	Msa1342380	0.800965	1.125146e-48	-8.615850e-47
Msa0079370	Msa1342380	0.820414	6.946972e-53	-8.615850e-47
Msa0080090	Msa1342380	0.804994	1.653829e-49	-8.615850e-47
Msa0081020	Msa1342380	0.843518	1.333801e-58	-8.615850e-47
Msa0089750	Msa1342380	0.804059	2.591037e-49	-8.615850e-47
Msa0101250	Msa1342380	0.800937	1.140264e-48	-8.615850e-47
Msa0101500	Msa1342380	-0.804723	1.883664e-49	-8.615850e-47
Msa0103770	Msa1342380	0.841144	5.678319e-58	-8.615850e-47
Msa0104670	Msa1342380	0.812239	4.686819e-51	-8.615850e-47
Msa0115790	Msa1342380	0.817113	3.901363e-52	-8.615850e-47
Msa0613110	Msa1342380	0.826863	2.147340e-54	-8.615850e-47
Msa0613120	Msa1342380	0.807390	5.174213e-50	-8.615850e-47
Msa0624060	Msa1342380	0.816234	6.142796e-52	-8.615850e-47
Msa0637600	Msa1342380	0.825048	5.797365e-54	-8.615850e-47
Msa0637720	Msa1342380	0.809754	1.618733e-50	-8.615850e-47
Msa0641130	Msa1342380	0.826636	2.433296e-54	-8.615850e-47
Msa0653660	Msa1342380	0.812475	4.161158e-51	-8.615850e-47
Msa0676130	Msa1342380	0.810551	1.089635e-50	-8.615850e-47
Msa0676180	Msa1342380	0.824478	7.899394e-54	-8.615850e-47
Msa0681250	Msa1342380	0.818348	2.054479e-52	-8.615850e-47
Msa0689430	Msa1342380	0.800842	1.191978e-48	-8.615850e-47
Msa0697880	Msa1342380	0.801373	9.282804e-49	-8.615850e-47
Msa0707250	Msa1342380	0.835766	1.386323e-56	-8.615850e-47
Msa0709270	Msa1342380	0.807543	4.802735e-50	-8.615850e-47
Msa0717890	Msa1342380	0.817562	3.091594e-52	-8.615850e-47
Msa0733010	Msa1342380	0.840413	8.829627e-58	-8.615850e-47
Msa0738030	Msa1342380	0.815401	9.422594e-52	-8.615850e-47
Msa0738340	Msa1342380	0.827640	1.399588e-54	-8.615850e-47
Msa0743930	Msa1342380	0.814554	1.452540e-51	-8.615850e-47
Msa0763890	Msa1342380	0.807974	3.889261e-50	-8.615850e-47
Msa0763920	Msa1342380	0.812379	4.366395e-51	-8.615850e-47
Msa0769300	Msa1342380	0.809755	1.617396e-50	-8.615850e-47
Msa0784480	Msa1342380	0.803116	4.063545e-49	-8.615850e-47
Msa0790600	Msa1342380	0.807947	3.941260e-50	-8.615850e-47
Msa0796980	Msa1342380	0.804908	1.722994e-49	-8.615850e-47
Msa0797770	Msa1342380	0.804658	1.943973e-49	-8.615850e-47
Msa0817460	Msa1342380	0.811058	8.463695e-51	-8.615850e-47
Msa0818060	Msa1342380	0.808644	2.798359e-50	-8.615850e-47
Msa0829300	Msa1342380	0.817952	2.525000e-52	-8.615850e-47
Msa0829330	Msa1342380	0.819319	1.236383e-52	-8.615850e-47
Msa0830230	Msa1342380	0.817513	3.171721e-52	-8.615850e-47
Msa0831110	Msa1342380	0.811493	6.811102e-51	-8.615850e-47
Msa0832340	Msa1342380	0.817260	3.617063e-52	-8.615850e-47
Msa0835230	Msa1342380	0.815936	7.158676e-52	-8.615850e-47
Msa0120990	Msa1342380	0.829810	4.179150e-55	-8.615850e-47
Msa0124320	Msa1342380	0.800642	1.309879e-48	-8.615850e-47
Msa0138020	Msa1342380	0.809452	1.878957e-50	-8.615850e-47
Msa0144530	Msa1342380	0.814974	1.172079e-51	-8.615850e-47
Msa0150860	Msa1342380	0.808510	2.989456e-50	-8.615850e-47
Msa0160960	Msa1342380	0.816520	5.301064e-52	-8.615850e-47
Msa0168310	Msa1342380	0.808115	3.629155e-50	-8.615850e-47
Msa0172080	Msa1342380	0.831992	1.219051e-55	-8.615850e-47
Msa0189040	Msa1342380	0.814901	1.216920e-51	-8.615850e-47
Msa0189710	Msa1342380	0.820074	8.311223e-53	-8.615850e-47
Msa0217700	Msa1342380	0.821406	4.106455e-53	-8.615850e-47
Msa0218370	Msa1342380	0.839078	1.964105e-57	-8.615850e-47
Msa0219590	Msa1342380	0.829866	4.050988e-55	-8.615850e-47
Msa0225100	Msa1342380	0.801867	7.350912e-49	-8.615850e-47
Msa0225110	Msa1342380	0.825629	4.223663e-54	-8.615850e-47
Msa0230320	Msa1342380	0.801767	7.709727e-49	-8.615850e-47
Msa0232020	Msa1342380	0.831159	1.954563e-55	-8.615850e-47
Msa0232090	Msa1342380	0.826258	2.994914e-54	-8.615850e-47
Msa0236420	Msa1342380	0.808633	2.814560e-50	-8.615850e-47
Msa1225860	Msa1342380	-0.813942	1.982240e-51	-8.615850e-47
Msa1226460	Msa1342380	0.806628	7.498953e-50	-8.615850e-47
Msa1232700	Msa1342380	0.803991	2.676900e-49	-8.615850e-47
Msa1236360	Msa1342380	0.804907	1.724030e-49	-8.615850e-47
Msa1236440	Msa1342380	0.804655	1.946330e-49	-8.615850e-47
Msa1246360	Msa1342380	0.818331	2.072797e-52	-8.615850e-47
Msa1257750	Msa1342380	0.807682	4.487242e-50	-8.615850e-47
Msa1277670	Msa1342380	0.804405	2.194236e-49	-8.615850e-47
Msa1282440	Msa1342380	0.812055	5.138453e-51	-8.615850e-47
Msa1283810	Msa1342380	0.800532	1.378860e-48	-8.615850e-47
Msa1299400	Msa1342380	-0.835305	1.812765e-56	-8.615850e-47
Msa1305810	Msa1342380	0.807198	5.683659e-50	-8.615850e-47
Msa1307560	Msa1342380	0.814599	1.419155e-51	-8.615850e-47
Msa1308870	Msa1342380	0.818409	1.989981e-52	-8.615850e-47
Msa1313280	Msa1342380	0.826793	2.232382e-54	-8.615850e-47
Msa1319560	Msa1342380	0.813592	2.367085e-51	-8.615850e-47
Msa1325410	Msa1342380	-0.853300	2.618288e-61	-8.615850e-47
Msa1329200	Msa1342380	0.810988	8.766190e-51	-8.615850e-47
Msa1331000	Msa1342380	0.824831	6.522549e-54	-8.615850e-47
Msa1331050	Msa1342380	-0.823301	1.491274e-53	-8.615850e-47
Msa1342380	Msa1346840	0.825253	5.185686e-54	-8.615850e-47
Msa1342380	Msa1352280	-0.821328	4.280497e-53	-8.615850e-47
Msa1342380	Msa1368360	0.813277	2.776071e-51	-8.615850e-47
Msa1342380	Msa1369920	-0.809465	1.867284e-50	-8.615850e-47
Msa1342380	Msa1372240	0.801412	9.115094e-49	-8.615850e-47
Msa1342380	Msa1378410	0.813565	2.399851e-51	-8.615850e-47
Msa1342380	Msa1392210	0.801459	8.914026e-49	-8.615850e-47
Msa1342380	Msa1393570	0.820926	5.298763e-53	-8.615850e-47
Msa1342380	Msa1419840	0.829324	5.486129e-55	-8.615850e-47
Msa1342380	Msa1423780	0.801092	1.059945e-48	-8.615850e-47
Msa1342380	Msa1425260	0.824541	7.633426e-54	-8.615850e-47
Msa1342380	Msa1442920	0.840837	6.836551e-58	-8.615850e-47
Msa1342380	Msa1448560	0.815789	7.722176e-52	-8.615850e-47
Msa1342380	Msa1450440	0.801276	9.719859e-49	-8.615850e-47
Msa1342380	Msa1452710	0.822611	2.159298e-53	-8.615850e-47
Msa1342380	Msa1458680	0.861192	1.219555e-63	-8.615850e-47
Msa1342380	Msa1463900	0.801384	9.235132e-49	-8.615850e-47
Msa0367870	Msa1342380	0.820970	5.177003e-53	-8.615850e-47
Msa0372300	Msa1342380	0.804777	1.835525e-49	-8.615850e-47
Msa0376630	Msa1342380	0.801169	1.022060e-48	-8.615850e-47
Msa0380930	Msa1342380	0.811415	7.080454e-51	-8.615850e-47
Msa0389770	Msa1342380	0.806015	1.009669e-49	-8.615850e-47
Msa0396290	Msa1342380	0.801982	6.962062e-49	-8.615850e-47
Msa0411390	Msa1342380	0.809166	2.164620e-50	-8.615850e-47
Msa0414140	Msa1342380	0.821048	4.966835e-53	-8.615850e-47
Msa0425170	Msa1342380	0.822396	2.422498e-53	-8.615850e-47
Msa0432160	Msa1342380	0.800204	1.608254e-48	-8.615850e-47
Msa0455760	Msa1342380	0.831176	1.936520e-55	-8.615850e-47
Msa0464120	Msa1342380	0.802867	4.575600e-49	-8.615850e-47
Msa0464350	Msa1342380	0.807134	5.862737e-50	-8.615850e-47
Msa0471670	Msa1342380	0.827916	1.201014e-54	-8.615850e-47
Msa0476680	Msa1342380	0.811847	5.703708e-51	-8.615850e-47
Msa0986510	Msa1342380	0.806203	9.221182e-50	-8.615850e-47
Msa0989360	Msa1342380	0.831692	1.445207e-55	-8.615850e-47
Msa0999680	Msa1342380	0.849701	2.730465e-60	-8.615850e-47
Msa1001180	Msa1342380	0.820847	5.525749e-53	-8.615850e-47
Msa1034500	Msa1342380	0.814426	1.549699e-51	-8.615850e-47
Msa1036610	Msa1342380	0.812633	3.843846e-51	-8.615850e-47
Msa1048220	Msa1342380	0.826891	2.114813e-54	-8.615850e-47
Msa1057390	Msa1342380	0.817204	3.722245e-52	-8.615850e-47
Msa1065460	Msa1342380	0.802133	6.482063e-49	-8.615850e-47
Msa1075650	Msa1342380	0.802326	5.915744e-49	-8.615850e-47
Msa1089460	Msa1342380	0.809714	1.650339e-50	-8.615850e-47
Msa1104560	Msa1342380	0.810257	1.261345e-50	-8.615850e-47
Msa1106510	Msa1342380	0.802749	4.840638e-49	-8.615850e-47
Msa0240900	Msa1342380	0.823407	1.408192e-53	-8.615850e-47
Msa0241140	Msa1342380	0.842625	2.306944e-58	-8.615850e-47
Msa0244640	Msa1342380	0.821940	3.090871e-53	-8.615850e-47
Msa0260780	Msa1342380	0.819285	1.258661e-52	-8.615850e-47
Msa0266180	Msa1342380	0.815265	1.009893e-51	-8.615850e-47
Msa0266200	Msa1342380	0.823078	1.681324e-53	-8.615850e-47
Msa0269970	Msa1342380	0.807446	5.034721e-50	-8.615850e-47
Msa0270650	Msa1342380	0.801527	8.632164e-49	-8.615850e-47
Msa0270960	Msa1342380	0.812321	4.497041e-51	-8.615850e-47
Msa0271540	Msa1342380	0.810127	1.345082e-50	-8.615850e-47
Msa0277960	Msa1342380	0.804806	1.810323e-49	-8.615850e-47
Msa0278580	Msa1342380	0.806558	7.760177e-50	-8.615850e-47
Msa0283330	Msa1342380	0.813110	3.021275e-51	-8.615850e-47
Msa0287740	Msa1342380	0.814866	1.238443e-51	-8.615850e-47
Msa0287780	Msa1342380	0.815303	9.907300e-52	-8.615850e-47
Msa0287870	Msa1342380	0.864819	9.238539e-65	-8.615850e-47
Msa0290870	Msa1342380	0.812495	4.119079e-51	-8.615850e-47
Msa0292930	Msa1342380	0.804467	2.130762e-49	-8.615850e-47
Msa0308630	Msa1342380	0.806478	8.068852e-50	-8.615850e-47
Msa0310090	Msa1342380	0.818925	1.519419e-52	-8.615850e-47
Msa0317970	Msa1342380	0.811304	7.484265e-51	-8.615850e-47
Msa0318680	Msa1342380	0.814676	1.364584e-51	-8.615850e-47
Msa0321620	Msa1342380	0.824416	8.168589e-54	-8.615850e-47
Msa0363790	Msa1342380	0.841534	4.482686e-58	-8.615850e-47
Msa1122150	Msa1342380	0.866439	2.849263e-65	-8.615850e-47
Msa1140630	Msa1342380	0.816498	5.362940e-52	-8.615850e-47
Msa1155170	Msa1342380	-0.807203	5.669695e-50	-8.615850e-47
Msa1160560	Msa1342380	0.855946	4.482898e-62	-8.615850e-47
Msa1161810	Msa1342380	0.800584	1.345644e-48	-8.615850e-47
Msa1170760	Msa1342380	0.802421	5.654585e-49	-8.615850e-47
Msa1190920	Msa1342380	0.802558	5.299106e-49	-8.615850e-47
Msa1204530	Msa1342380	0.815562	8.675773e-52	-8.615850e-47
Msa1204630	Msa1342380	0.811724	6.066158e-51	-8.615850e-47
Msa1211230	Msa1342380	-0.833411	5.415300e-56	-8.615850e-47
Msa1211420	Msa1342380	-0.806747	7.079173e-50	-8.615850e-47
Msa0484650	Msa1342380	0.814941	1.192124e-51	-8.615850e-47
Msa0486690	Msa1342380	0.814819	1.268507e-51	-8.615850e-47
Msa0518380	Msa1342380	0.815653	8.281121e-52	-8.615850e-47
Msa0521010	Msa1342380	0.815877	7.379982e-52	-8.615850e-47
Msa0531180	Msa1342380	0.800745	1.247780e-48	-8.615850e-47
Msa0534150	Msa1342380	0.820636	6.177611e-53	-8.615850e-47
Msa0545050	Msa1342380	0.830029	3.696602e-55	-8.615850e-47
Msa0558370	Msa1342380	0.811916	5.511839e-51	-8.615850e-47
Msa0572840	Msa1342380	0.801974	6.989229e-49	-8.615850e-47
Msa0583360	Msa1342380	-0.806336	8.644035e-50	-8.615850e-47
Msa0594050	Msa1342380	0.811594	6.473783e-51	-8.615850e-47
Msa0600590	Msa1342380	0.810074	1.381134e-50	-8.615850e-47
Msa0846860	Msa1342380	0.800471	1.419084e-48	-8.615850e-47
Msa0855870	Msa1342380	0.817058	4.014989e-52	-8.615850e-47
Msa0857940	Msa1342380	0.802800	4.723602e-49	-8.615850e-47
Msa0878220	Msa1342380	0.835708	1.433358e-56	-8.615850e-47
Msa0898750	Msa1342380	0.800711	1.267855e-48	-8.615850e-47
Msa0899970	Msa1342380	0.825456	4.641997e-54	-8.615850e-47
Msa0901930	Msa1342380	0.840952	6.378701e-58	-8.615850e-47
Msa0943970	Msa1342380	0.854484	1.193763e-61	-8.615850e-47
Msa0944020	Msa1342380	0.823155	1.612721e-53	-8.615850e-47
Msa0964310	Msa1342380	0.803185	3.933743e-49	-8.615850e-47
Msa0965080	Msa1342380	0.846460	2.142375e-59	-8.615850e-47
Msa0965290	Msa1342380	0.853820	1.855264e-61	-8.615850e-47
Msa0967870	Msa1342380	0.810411	1.168360e-50	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1342380	MtrunA17_Chr3g0103421	85.616	146	15	2	1	144	1	142	9.17e-66	196
Msa1342380	MtrunA17_Chr5g0447241	52.542	118	35	4	27	144	20	116	4.53e-26	95.5
Msa1342380	MtrunA17_Chr1g0173641	45.977	87	43	3	62	144	16	102	4.92e-16	68.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1342380	AT3G20898.1	61.111	54	21	0	88	141	50	103	1.38e-17	73.6
Msa1342380	AT1G51355.1	57.895	57	22	1	88	144	56	110	3.16e-17	72.8

Find 20 sgRNAs with CRISPR-Local

Find 26 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTCTTGAAGTTTGTTCTTCT+AGG	0.207635	tig0005557:+22651	None:intergenic
CACCAAAAGGTCAGAAATTT+AGG	0.220093	tig0005557:-22461	Msa1342380:CDS
ATCCTAAATTTCTGACCTTT+TGG	0.224238	tig0005557:+22459	None:intergenic
GAAACTACCCTTTGTTTCTT+TGG	0.243329	tig0005557:+22408	None:intergenic
ATTCTTTGTACCTCCTGATT+TGG	0.303744	tig0005557:-22355	Msa1342380:CDS
ACCCTTTGTTTCTTTGGTGC+TGG	0.336817	tig0005557:+22414	None:intergenic
TTTGATGCTGTTCTTCCAGA+AGG	0.463715	tig0005557:+22735	None:intergenic
GGAGGACATGTTGAAATCTC+TGG	0.487392	tig0005557:+22435	None:intergenic
TTGATGCTGTTCTTCCAGAA+GGG	0.495665	tig0005557:+22736	None:intergenic
CTTTGTTTCTTTGGTGCTGG+AGG	0.505878	tig0005557:+22417	None:intergenic
TTTCAAATTGTTCTTTGAGA+AGG	0.508424	tig0005557:-22389	Msa1342380:CDS
TTCCTTTGAAGACTCTTGAG+AGG	0.511869	tig0005557:+22548	None:intergenic
TGATGCTGTTCTTCCAGAAG+GGG	0.536691	tig0005557:+22737	None:intergenic
AGTGCATGTTCAACACCAAA+AGG	0.539127	tig0005557:-22474	Msa1342380:CDS
GGAGGTACAAAGAATGAAAG+TGG	0.568095	tig0005557:+22363	None:intergenic
CTCCAGCACCAAAGAAACAA+AGG	0.574035	tig0005557:-22416	Msa1342380:CDS
AACCTCTCAAGAGTCTTCAA+AGG	0.577571	tig0005557:-22550	Msa1342380:CDS
TCCAGCACCAAAGAAACAAA+GGG	0.597503	tig0005557:-22415	Msa1342380:CDS
CAGCATCAAACAAAATCTCA+AGG	0.603787	tig0005557:-22722	Msa1342380:CDS
AGAGAAGACTGAAATTTCTG+AGG	0.632052	tig0005557:-22526	Msa1342380:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TGTTCTTGTTGTAGTTTTTT+TGG	+	tig0005557:22375-22394	None:intergenic	25.0%
!	AAAAAAACTACAACAAGAAC+AGG	-	tig0005557:22374-22393	Msa1342380:CDS	25.0%
!!	TTTCAAATTGTTCTTTGAGA+AGG	-	tig0005557:22681-22700	Msa1342380:CDS	25.0%
!	TTCTTGAAGTTTGTTCTTCT+AGG	+	tig0005557:22422-22441	None:intergenic	30.0%
!	ATCCTAAATTTCTGACCTTT+TGG	+	tig0005557:22614-22633	None:intergenic	30.0%
	CAGCATCAAACAAAATCTCA+AGG	-	tig0005557:22348-22367	Msa1342380:CDS	35.0%
!!	GTTTTTGAAAGACAGCTAGA+AGG	+	tig0005557:22503-22522	None:intergenic	35.0%
	AGAGAAGACTGAAATTTCTG+AGG	-	tig0005557:22544-22563	Msa1342380:CDS	35.0%
	CACCAAAAGGTCAGAAATTT+AGG	-	tig0005557:22609-22628	Msa1342380:CDS	35.0%
!	GAAACTACCCTTTGTTTCTT+TGG	+	tig0005557:22665-22684	None:intergenic	35.0%
	ATTCTTTGTACCTCCTGATT+TGG	-	tig0005557:22715-22734	Msa1342380:CDS	35.0%
!!	AAGAAAAAGTGCTCCAAATC+AGG	+	tig0005557:22731-22750	None:intergenic	35.0%
!!!	TGATTTGGAGCACTTTTTCT+TGG	-	tig0005557:22730-22749	Msa1342380:CDS	35.0%
	TTGATGCTGTTCTTCCAGAA+GGG	+	tig0005557:22337-22356	None:intergenic	40.0%
	TTTGATGCTGTTCTTCCAGA+AGG	+	tig0005557:22338-22357	None:intergenic	40.0%
	AACCTCTCAAGAGTCTTCAA+AGG	-	tig0005557:22520-22539	Msa1342380:CDS	40.0%
!	TTCCTTTGAAGACTCTTGAG+AGG	+	tig0005557:22525-22544	None:intergenic	40.0%
	AGTGCATGTTCAACACCAAA+AGG	-	tig0005557:22596-22615	Msa1342380:CDS	40.0%
	TCCAGCACCAAAGAAACAAA+GGG	-	tig0005557:22655-22674	Msa1342380:CDS	40.0%
!	GGAGGTACAAAGAATGAAAG+TGG	+	tig0005557:22710-22729	None:intergenic	40.0%
!!	AAAAAGTGCTCCAAATCAGG+AGG	+	tig0005557:22728-22747	None:intergenic	40.0%
	TGATGCTGTTCTTCCAGAAG+GGG	+	tig0005557:22336-22355	None:intergenic	45.0%
	GGAGGACATGTTGAAATCTC+TGG	+	tig0005557:22638-22657	None:intergenic	45.0%
!!	CTTTGTTTCTTTGGTGCTGG+AGG	+	tig0005557:22656-22675	None:intergenic	45.0%
	CTCCAGCACCAAAGAAACAA+AGG	-	tig0005557:22654-22673	Msa1342380:CDS	45.0%
!	ACCCTTTGTTTCTTTGGTGC+TGG	+	tig0005557:22659-22678	None:intergenic	45.0%

Chromosome	Type	Strat	End	Strand	Name
tig0005557	gene	22329	22763	22329	ID=Msa1342380;Name=Msa1342380
tig0005557	mRNA	22329	22763	22329	ID=Msa1342380-mRNA-1;Parent=Msa1342380;Name=Msa1342380-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|144
tig0005557	exon	22329	22763	22329	ID=Msa1342380-mRNA-1:exon:3593;Parent=Msa1342380-mRNA-1
tig0005557	CDS	22329	22763	22329	ID=Msa1342380-mRNA-1:cds;Parent=Msa1342380-mRNA-1

Gene Sequence

>Msa1342380

ATGGCCCCTTCTGGAAGAACAGCATCAAACAAAATCTCAAGGACCAAAAAAACTACAACAAGAACAGGAACAAGAACAAGAACAAGACAACCTAGAAGAACAAACTTCAAGAACAAGAAGCAGCAAAGTAGTACTCATAGCAAAAAACAAGAGATAATTAACAGTGTTTTACCTTCTAGCTGTCTTTCAAAAACCTCTCAAGAGTCTTCAAAGGAAGAGAAGACTGAAATTTCTGAGGTAATTGATGTTTCTAACAATAACAGTAACAGTGCATGTTCAACACCAAAAGGTCAGAAATTTAGGATACCAGAGATTTCAACATGTCCTCCAGCACCAAAGAAACAAAGGGTAGTTTCAAATTGTTCTTTGAGAAGGTCACCACTTTCATTCTTTGTACCTCCTGATTTGGAGCACTTTTTCTTGGTGACACTTTGA

Protein sequence

>Msa1342380

MAPSGRTASNKISRTKKTTTRTGTRTRTRQPRRTNFKNKKQQSSTHSKKQEIINSVLPSSCLSKTSQESSKEEKTEISEVIDVSNNNSNSACSTPKGQKFRIPEISTCPPAPKKQRVVSNCSLRRSPLSFFVPPDLEHFFLVTL*