AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0465080


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0465080 MtrunA17_Chr3g0117001 90.985 599 28 2 1 574 1 598 0.0 1110
Msa0465080 MtrunA17_Chr3g0117001 91.496 341 12 1 578 901 674 1014 0.0 649
Msa0465080 MtrunA17_Chr2g0290721 43.226 620 291 13 4 573 2 610 3.24e-143 451
Msa0465080 MtrunA17_Chr2g0290721 50.299 334 147 2 579 893 688 1021 3.46e-106 352
Msa0465080 MtrunA17_Chr4g0076511 42.165 619 299 14 4 573 2 610 2.07e-133 425
Msa0465080 MtrunA17_Chr4g0076511 49.254 335 148 5 579 893 688 1020 8.10e-97 327
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0465080 AT5G50170.1 47.377 610 278 12 4 574 2 607 1.39e-172 528
Msa0465080 AT5G50170.1 51.343 335 142 4 578 891 683 1017 2.74e-109 361
Msa0465080 AT1G03370.2 43.252 615 292 13 4 574 2 603 2.70e-149 461
Msa0465080 AT1G03370.2 73.504 117 31 0 579 695 680 796 5.72e-50 190
Msa0465080 AT1G03370.1 43.252 615 292 13 4 574 2 603 1.21e-146 460
Msa0465080 AT1G03370.1 49.563 343 150 5 579 901 680 1019 4.63e-97 327

Find 179 sgRNAs with CRISPR-Local

Find 494 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTACTTGCTCAGAGGTTTA+AGG 0.117652 3_3:-65337630 Msa0465080:CDS
ATTTCTTTCTGCAAGGGTTC+TGG 0.157779 3_3:-65336120 Msa0465080:CDS
TGATTGATGGTTACCTTAAT+TGG 0.185328 3_3:+65335474 None:intergenic
CTGACACATGCCTGTTAAAT+TGG 0.188888 3_3:+65334750 None:intergenic
TACAATTTCTCTTCATTATA+AGG 0.192020 3_3:-65338485 Msa0465080:CDS
GAGGCAACCCAAACAATTTC+TGG 0.206916 3_3:+65336324 None:intergenic
AACAAACTCCTCGTTCAAAA+TGG 0.230373 3_3:+65340833 None:intergenic
CTTTCATCATTGTGCTTTGT+AGG 0.238651 3_3:+65337711 None:intergenic
TCCTTATGGGAATTCATTTC+GGG 0.255715 3_3:-65337822 Msa0465080:CDS
TGATCTTGTTTGTCCATTAC+AGG 0.255725 3_3:+65336946 None:intergenic
AAACTCAACTGCTTCAATTA+AGG 0.266631 3_3:-65338428 Msa0465080:CDS
TTCCTTATGGGAATTCATTT+CGG 0.268510 3_3:-65337823 Msa0465080:CDS
TGTAATTTGTTCTTTCTGAT+AGG 0.271011 3_3:+65335596 None:intergenic
CTCTGCTGAACTACCAATTA+AGG 0.276365 3_3:-65335487 Msa0465080:intron
TCTACATTCCAGAAATTGTT+TGG 0.291905 3_3:-65336332 Msa0465080:CDS
CTTCCTTCAGTGTTTGTGTT+TGG 0.296689 3_3:+65334695 None:intergenic
ATCTTTCCTAAACTGAGAAT+TGG 0.299105 3_3:+65338051 None:intergenic
GAAGAGAAAATTGCATTTAC+AGG 0.299291 3_3:-65336264 Msa0465080:intron
ATGAAAGGTGTGATAGAAAA+TGG 0.304619 3_3:-65337695 Msa0465080:CDS
TGGACCCCTGAGGTTCCTTA+TGG 0.312969 3_3:-65337836 Msa0465080:CDS
TTTCTTTCTGCAAGGGTTCT+GGG 0.313222 3_3:-65336119 Msa0465080:CDS
GGCAGGCAATTACATACTTC+TGG 0.318091 3_3:-65337532 Msa0465080:CDS
TCGTCCTCTTCGAAGAATTA+TGG 0.326116 3_3:+65335983 None:intergenic
GATAAACAAAGAACATTTGC+TGG 0.331980 3_3:-65337588 Msa0465080:CDS
TTAATTGAAGCAGTTGAGTT+TGG 0.338297 3_3:+65338430 None:intergenic
GTAATTTGTTCTTTCTGATA+GGG 0.342312 3_3:+65335597 None:intergenic
TCGCGCCCAATTCTCAGTTT+AGG 0.348773 3_3:-65338057 Msa0465080:CDS
TCATTGATTAGAAATTCTTC+TGG 0.353289 3_3:+65336302 None:intergenic
AGACATATCTTCATCTTTCC+AGG 0.360057 3_3:+65337982 None:intergenic
CTCCAGTCGAACTTTAAACT+TGG 0.365288 3_3:+65334401 None:intergenic
ACTAGTTCTCCTAAGCTATC+TGG 0.370900 3_3:+65337401 None:intergenic
ATCTTTAGTCACTCTAATAT+AGG 0.372207 3_3:+65337883 None:intergenic
ATGTTACGTACCAATTTAAC+AGG 0.378460 3_3:-65334760 Msa0465080:CDS
CCTCCATCATTAGCATCATT+AGG 0.379450 3_3:-65336020 Msa0465080:CDS
CTAGTCTCATTGGAGTCAAC+AGG 0.382626 3_3:-65336995 Msa0465080:CDS
CGGATTCCTGTTGGTGAGGT+TGG 0.389430 3_3:-65340714 Msa0465080:CDS
TGAAGAAGGCATTGCACTAA+TGG 0.390731 3_3:-65338182 Msa0465080:CDS
ACACGGAAGTGATCAGAAAA+TGG 0.390903 3_3:+65334638 None:intergenic
TATGAAAAGAACTGGTTGTA+TGG 0.391972 3_3:-65334834 Msa0465080:CDS
TCCTTCTTCATCTTGCGTCT+TGG 0.391985 3_3:+65335938 None:intergenic
CCTCACATCTTGTGATATCA+TGG 0.394079 3_3:-65337745 Msa0465080:CDS
AGCAAATATTGCCACCTACT+TGG 0.399405 3_3:-65340677 Msa0465080:CDS
AGACAGAAAGCCAGTGGAAT+TGG 0.405883 3_3:-65337556 Msa0465080:CDS
AGGATAGATCCAGAGTCTTC+AGG 0.408636 3_3:+65335540 None:intergenic
CTACATTCCAGAAATTGTTT+GGG 0.410876 3_3:-65336331 Msa0465080:CDS
GATATTAGAGTTTGATGCTA+TGG 0.411267 3_3:-65336781 Msa0465080:CDS
TGCAAGAAGGGGATTGGTCC+TGG 0.412225 3_3:-65338000 Msa0465080:CDS
AGAAAGTCCTGAAAATTTGC+AGG 0.414312 3_3:-65338140 Msa0465080:CDS
TTGATGTACTTGTTAGTGTA+TGG 0.415153 3_3:-65337856 Msa0465080:CDS
GTTACTGTAGCTTTAATTGA+GGG 0.416589 3_3:-65337025 Msa0465080:CDS
AGCTGCTTCAAAATTAGTTA+AGG 0.421735 3_3:-65337930 Msa0465080:CDS
AGATGAAATGTGAGGACGTT+CGG 0.425919 3_3:+65338393 None:intergenic
GGACCCCTGAGGTTCCTTAT+GGG 0.435476 3_3:-65337835 Msa0465080:CDS
TCTTTCCTAAACTGAGAATT+GGG 0.440200 3_3:+65338052 None:intergenic
GCATGAAGATCAAGAGGTCT+TGG 0.441294 3_3:-65335568 Msa0465080:CDS
CATAAGATTATGAAAAGAAC+TGG 0.445701 3_3:-65334842 Msa0465080:CDS
ACATGCCTTTCGAGTACATC+AGG 0.447487 3_3:+65334779 None:intergenic
TGTTACTGTAGCTTTAATTG+AGG 0.451394 3_3:-65337026 Msa0465080:CDS
AGTTTCAGCAAAGGATCAAC+AGG 0.452752 3_3:-65334434 Msa0465080:CDS
TATAATGAAGAGAAATTGTA+AGG 0.453242 3_3:+65338488 None:intergenic
ACAAACTCCTCGTTCAAAAT+GGG 0.455588 3_3:+65340834 None:intergenic
ACATTGGCATTATGTGGCTT+AGG 0.455616 3_3:-65334464 Msa0465080:CDS
ATTCTTTACAAGATAATGCC+TGG 0.457645 3_3:-65337794 Msa0465080:CDS
TCAAAACCAACCTCACCAAC+AGG 0.461903 3_3:+65340708 None:intergenic
GAATTCCCATAAGGAACCTC+AGG 0.462673 3_3:+65337830 None:intergenic
GTAGAATTCCTTTGAGGTGA+TGG 0.464547 3_3:+65336350 None:intergenic
GTCGGCTATTTCTTTCTGCA+AGG 0.469677 3_3:-65336127 Msa0465080:CDS
GAGCAAGTAGGTTAGCAAAC+TGG 0.472357 3_3:+65337642 None:intergenic
TGAAAGGTGTGATAGAAAAT+GGG 0.473199 3_3:-65337694 Msa0465080:CDS
GTGTGGTCCAAGTCAACCTC+GGG 0.476221 3_3:-65337450 Msa0465080:CDS
CTTCAATGTTCTAACAAGAA+TGG 0.478900 3_3:-65340648 Msa0465080:CDS
CGAAGAATTATGGCCAATGT+AGG 0.482857 3_3:+65335993 None:intergenic
GTTTAAGGTGCTAGATAAGG+AGG 0.484599 3_3:-65337615 Msa0465080:CDS
TCTCGTGTGAAGCTTAAACT+TGG 0.484866 3_3:-65340900 Msa0465080:CDS
TGGAATGTAGAATTCCTTTG+AGG 0.485098 3_3:+65336344 None:intergenic
CAAATTTGCAAGAAGGGGAT+TGG 0.487087 3_3:-65338006 Msa0465080:CDS
ATCCAAGTTTAAAGTTCGAC+TGG 0.487330 3_3:-65334403 Msa0465080:CDS
TAATTTGTTCTTTCTGATAG+GGG 0.487805 3_3:+65335598 None:intergenic
CTTCCTAATGATGCTAATGA+TGG 0.493959 3_3:+65336017 None:intergenic
TGGGGCTAAACAAGGTTTGA+AGG 0.495842 3_3:-65337675 Msa0465080:CDS
TTGGTAATGCCTGAAGACTC+TGG 0.503073 3_3:-65335549 Msa0465080:CDS
CACCATGTGCTTTCATGCCA+TGG 0.504412 3_3:+65337059 None:intergenic
AATATAGGTTTGTTCTTCAG+TGG 0.505534 3_3:+65337898 None:intergenic
TACTGTAGCTTTAATTGAGG+GGG 0.506096 3_3:-65337023 Msa0465080:CDS
GGACAACAAATTTGCAAGAA+GGG 0.506318 3_3:-65338012 Msa0465080:CDS
GGACTATGACACTACACCTT+GGG 0.509537 3_3:-65334813 Msa0465080:CDS
CTCAGAAATCGCATGTGTAA+AGG 0.509630 3_3:-65334338 None:intergenic
GAGGTTTAAGGTGCTAGATA+AGG 0.516605 3_3:-65337618 Msa0465080:CDS
TCGGCTATTTCTTTCTGCAA+GGG 0.519816 3_3:-65336126 Msa0465080:CDS
TTACAGGTGAAAACCACATA+AGG 0.523041 3_3:+65336962 None:intergenic
TGAAGGCAAACAGTTGTTGA+AGG 0.524534 3_3:-65338338 Msa0465080:CDS
TAGTGATGAATCAAAGGTAG+TGG 0.525040 3_3:-65340754 Msa0465080:CDS
CAGAAAGCCAGTGGAATTGG+TGG 0.526703 3_3:-65337553 Msa0465080:CDS
ATGTATACATTGGCATTATG+TGG 0.530719 3_3:-65334470 Msa0465080:CDS
GAAATTGAGAAATCAGCTCT+TGG 0.533686 3_3:-65334513 Msa0465080:CDS
TTGCCTGCCACCAATTCCAC+TGG 0.534344 3_3:+65337546 None:intergenic
CTCACATCTTGTGATATCAT+GGG 0.534647 3_3:-65337744 Msa0465080:CDS
ATGCCTTCTTCAAAACTACA+AGG 0.535807 3_3:+65338193 None:intergenic
ACCCGAAATGAATTCCCATA+AGG 0.536036 3_3:+65337821 None:intergenic
ATTGAACTGCCAGATAGCTT+AGG 0.537298 3_3:-65337410 Msa0465080:CDS
TGATGTTTCTGAACAATCCA+CGG 0.537679 3_3:+65338261 None:intergenic
TCTTGTGATATCATGGGGAA+TGG 0.537854 3_3:-65337738 Msa0465080:CDS
TGCACAGGTAAGTTCAGTGA+TGG 0.538622 3_3:-65334891 Msa0465080:intron
AAGCCAGTGGAATTGGTGGC+AGG 0.542795 3_3:-65337549 Msa0465080:CDS
CAGAAAATGGAACGCCATTG+AGG 0.542984 3_3:+65334651 None:intergenic
GGGACAACAAATTTGCAAGA+AGG 0.545965 3_3:-65338013 Msa0465080:CDS
GAAGAATTATGGCCAATGTA+GGG 0.546603 3_3:+65335994 None:intergenic
CTGTTGACTCCAATGAGACT+AGG 0.548291 3_3:+65336996 None:intergenic
AGGGTTGTCAGATCCTTATG+TGG 0.551722 3_3:-65336975 Msa0465080:CDS
TTATCGCTAATCGCATAGAA+AGG 0.553560 3_3:-65338315 Msa0465080:CDS
TTGAGACATCAGATCCTCAA+TGG 0.556417 3_3:-65336910 Msa0465080:CDS
AGAAGAGCATGAAGATCAAG+AGG 0.557385 3_3:-65335574 Msa0465080:CDS
TGAAAGCACATGGTGATGGA+TGG 0.558432 3_3:-65337051 Msa0465080:CDS
TTGATTAGAAATTCTTCTGG+AGG 0.561650 3_3:+65336305 None:intergenic
TTACTGTAGCTTTAATTGAG+GGG 0.563678 3_3:-65337024 Msa0465080:CDS
GGCATGAAAGCACATGGTGA+TGG 0.566627 3_3:-65337055 Msa0465080:CDS
ATCATTAGGAAGCCCTACAT+TGG 0.568432 3_3:-65336006 Msa0465080:CDS
GCCTTCTTCAAAACTACAAG+GGG 0.570452 3_3:+65338195 None:intergenic
ACACAAGACAAATCTTCTCC+AGG 0.571230 3_3:+65337776 None:intergenic
TCATCATAGTGATGAATCAA+AGG 0.575054 3_3:-65340760 Msa0465080:CDS
TCAATCTTCCATCACCTCAA+AGG 0.575235 3_3:-65336358 Msa0465080:CDS
TAGTTCAGCAGAGTAAATCC+TGG 0.576814 3_3:+65335497 None:intergenic
ACATCAGATCCTCAATGGAA+TGG 0.576877 3_3:-65336905 Msa0465080:intron
GACAACAAATTTGCAAGAAG+GGG 0.580466 3_3:-65338011 Msa0465080:CDS
AAGATGAAGAAGGAAGGCTT+AGG 0.581766 3_3:-65335929 Msa0465080:CDS
CTACAAAGCACAATGATGAA+AGG 0.583931 3_3:-65337710 Msa0465080:CDS
ACTTCCACATACAAAACTGA+TGG 0.585002 3_3:+65336750 None:intergenic
TGGATCTATCCTAGAAGATG+AGG 0.587308 3_3:-65335529 Msa0465080:CDS
GCCAAGACGCAAGATGAAGA+AGG 0.588150 3_3:-65335939 Msa0465080:CDS
AGAAGATTTGTCTTGTGTAG+AGG 0.589987 3_3:-65337771 Msa0465080:CDS
CAAGTTTAAAGTTCGACTGG+AGG 0.590700 3_3:-65334400 Msa0465080:CDS
TGGACTATGACACTACACCT+TGG 0.591215 3_3:-65334814 Msa0465080:CDS
CCTAATGATGCTAATGATGG+AGG 0.596932 3_3:+65336020 None:intergenic
AAAGATTTAGCAGAACTACA+AGG 0.597502 3_3:-65338034 Msa0465080:CDS
ATAATTCTTCGAAGAGGACG+AGG 0.598967 3_3:-65335981 Msa0465080:CDS
TAAGGTGAAGGATATTGCTG+AGG 0.601117 3_3:-65340808 Msa0465080:CDS
GGAGCTCTAAGTTTCAGCAA+AGG 0.606303 3_3:-65334443 Msa0465080:CDS
CCTTAAACCTCTGAGCAAGT+AGG 0.607128 3_3:+65337630 None:intergenic
ATAGAAAATGGGGCTAAACA+AGG 0.607329 3_3:-65337683 Msa0465080:CDS
GAAAGCACATGGTGATGGAT+GGG 0.612846 3_3:-65337050 Msa0465080:CDS
CATTGAAGCTCGAACCAAGT+AGG 0.613844 3_3:+65340663 None:intergenic
AATGAAGTTATGATCCTCAA+TGG 0.614816 3_3:-65334665 Msa0465080:CDS
TATCCAAACACAAACACTGA+AGG 0.619398 3_3:-65334698 Msa0465080:CDS
TGCCTTCTTCAAAACTACAA+GGG 0.619857 3_3:+65338194 None:intergenic
AGAACGAAACTCAAAATCCG+TGG 0.625265 3_3:-65338278 Msa0465080:CDS
TCCACATACAAAACTGATGG+TGG 0.625286 3_3:+65336753 None:intergenic
AGACGCAAGATGAAGAAGGA+AGG 0.627033 3_3:-65335935 Msa0465080:CDS
CGAGGTATCGATGCAAGGCA+CGG 0.630444 3_3:-65335963 Msa0465080:CDS
TTGCTAACCTACTTGCTCAG+AGG 0.631684 3_3:-65337637 Msa0465080:CDS
GAAAGTCCTGAAAATTTGCA+GGG 0.631919 3_3:-65338139 Msa0465080:CDS
AATTCCCATAAGGAACCTCA+GGG 0.632610 3_3:+65337831 None:intergenic
CAAACACAAACACTGAAGGA+AGG 0.633299 3_3:-65334694 Msa0465080:CDS
GGTGTGGTCCAAGTCAACCT+CGG 0.633718 3_3:-65337451 Msa0465080:CDS
GAAAGTTTAAATACAAGACA+AGG 0.635240 3_3:-65340878 Msa0465080:CDS
GAGGACGAGGTATCGATGCA+AGG 0.637951 3_3:-65335968 Msa0465080:CDS
TAAAACCTGATGTACTCGAA+AGG 0.640491 3_3:-65334784 Msa0465080:CDS
TGTTATCAATATCTTCCCAA+AGG 0.641831 3_3:+65336054 None:intergenic
GGTGAGGTACGGATTCCTGT+TGG 0.642859 3_3:-65340723 Msa0465080:CDS
CCATGATATCACAAGATGTG+AGG 0.647215 3_3:+65337745 None:intergenic
CTTCTAATAGGAACTGACCA+TGG 0.647931 3_3:-65337076 Msa0465080:intron
AAGATTTAGCAGAACTACAA+GGG 0.650173 3_3:-65338033 Msa0465080:CDS
GAAAGGTGTGATAGAAAATG+GGG 0.653678 3_3:-65337693 Msa0465080:CDS
TCACATCTTGTGATATCATG+GGG 0.656320 3_3:-65337743 Msa0465080:CDS
AAGGACAAACCATTCCATTG+AGG 0.656530 3_3:+65336896 None:intergenic
CTTTGCAGACAGAAAGCCAG+TGG 0.659478 3_3:-65337562 Msa0465080:CDS
TTGGCCATAATTCTTCGAAG+AGG 0.663350 3_3:-65335987 Msa0465080:CDS
TAGTCTCATTGGAGTCAACA+GGG 0.666827 3_3:-65336994 Msa0465080:CDS
GGTACGGATTCCTGTTGGTG+AGG 0.669898 3_3:-65340718 Msa0465080:CDS
TATGATTCATAAAAGAAACA+TGG 0.676075 3_3:+65338461 None:intergenic
TGAAGCTCGAACCAAGTAGG+TGG 0.684082 3_3:+65340666 None:intergenic
TGCAAGTGTGATGTATACAT+TGG 0.693705 3_3:-65334480 Msa0465080:CDS
GACCATGGCATGAAAGCACA+TGG 0.699877 3_3:-65337061 Msa0465080:CDS
GTGGTCCAAGTCAACCTCGG+GGG 0.700429 3_3:-65337448 Msa0465080:CDS
TGTTAGTGTATGGACCCCTG+AGG 0.705739 3_3:-65337846 Msa0465080:CDS
AATTGATGAGATGAAATGTG+AGG 0.715068 3_3:+65338385 None:intergenic
TGTGGTCCAAGTCAACCTCG+GGG 0.726685 3_3:-65337449 Msa0465080:CDS
AGTCCTGAAAATTTGCAGGG+CGG 0.751620 3_3:-65338136 Msa0465080:CDS
CCTTCTTCAAAACTACAAGG+GGG 0.754878 3_3:+65338196 None:intergenic
ATTCCCATAAGGAACCTCAG+GGG 0.815311 3_3:+65337832 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGATATTATGTTTTTTTTAA+TGG - chr3_3:65334754-65334773 Msa0465080:CDS 10.0%
!! TTATATATGAAAAACTTAAT+AGG - chr3_3:65335660-65335679 Msa0465080:intron 10.0%
!!! ATTTTATTTTTTTTCTTTGT+TGG - chr3_3:65336450-65336469 Msa0465080:intron 10.0%
!!! ATCAATTTTTTGATAAAAAT+CGG - chr3_3:65336929-65336948 Msa0465080:CDS 10.0%
!!! AAATTTTTCAACAAATTTTG+TGG - chr3_3:65334674-65334693 Msa0465080:CDS 15.0%
!! CAATTAACATACTAATATTT+AGG + chr3_3:65334783-65334802 None:intergenic 15.0%
!! ATATTAGTATGTTAATTGTT+AGG - chr3_3:65334785-65334804 Msa0465080:CDS 15.0%
!! TATTAGTATGTTAATTGTTA+GGG - chr3_3:65334786-65334805 Msa0465080:CDS 15.0%
!! CAAAAAATATTTACTATTTG+TGG + chr3_3:65334859-65334878 None:intergenic 15.0%
!!! ATTTATCACAATTTTGAAAA+TGG + chr3_3:65334890-65334909 None:intergenic 15.0%
!! TAAGGAATTAAATAAGTTAA+AGG + chr3_3:65335045-65335064 None:intergenic 15.0%
!! TAAATAATGAATTCATATGA+AGG - chr3_3:65335539-65335558 Msa0465080:CDS 15.0%
!! AACTTCAAAAATATCAATAA+TGG - chr3_3:65335629-65335648 Msa0465080:intron 15.0%
!! CATTCTACAATTATAAAAAA+GGG + chr3_3:65336086-65336105 None:intergenic 15.0%
!! CATTCTACAATTATAAAAAA+GGG + chr3_3:65336086-65336105 None:intergenic 15.0%
!! TTCAAGAAATAAAAAAAGTA+TGG + chr3_3:65336719-65336738 None:intergenic 15.0%
!! ATATAAACACATAAAAAATG+TGG + chr3_3:65337808-65337827 None:intergenic 15.0%
!!! TTTTGACTTGATATTTAAAT+TGG + chr3_3:65339923-65339942 None:intergenic 15.0%
!!! GTTAATGTTTGTATTTTCTT+CGG - chr3_3:65334990-65335009 Msa0465080:intron 20.0%
!!! TTAATGTTTGTATTTTCTTC+GGG - chr3_3:65334991-65335010 Msa0465080:intron 20.0%
!!! CATAAAATAGGCTTTTAAAT+AGG + chr3_3:65335436-65335455 None:intergenic 20.0%
!! TTATTTAGATGCTGATATAT+TGG + chr3_3:65335575-65335594 None:intergenic 20.0%
!! GCATTCTACAATTATAAAAA+AGG + chr3_3:65336087-65336106 None:intergenic 20.0%
!! GCATTCTACAATTATAAAAA+AGG + chr3_3:65336087-65336106 None:intergenic 20.0%
!! AAATATATGCTATAGAAACT+AGG + chr3_3:65336229-65336248 None:intergenic 20.0%
!!! TTTGTTATGTTTATTACCTT+AGG - chr3_3:65336380-65336399 Msa0465080:intron 20.0%
!! AAATAAAATGACAGAAAGAA+TGG + chr3_3:65336439-65336458 None:intergenic 20.0%
!! TTTATCTTAAATGTAAACTC+AGG + chr3_3:65336571-65336590 None:intergenic 20.0%
!! TTGAGATAAAAAAATCAGTT+TGG + chr3_3:65336757-65336776 None:intergenic 20.0%
!!! AACTGATTTTTTTATCTCAA+TGG - chr3_3:65336757-65336776 Msa0465080:CDS 20.0%
!! TATAATGAAGAGAAATTGTA+AGG + chr3_3:65336813-65336832 None:intergenic 20.0%
!! TACAATTTCTCTTCATTATA+AGG - chr3_3:65336813-65336832 Msa0465080:intron 20.0%
!! TATGATTCATAAAAGAAACA+TGG + chr3_3:65336840-65336859 None:intergenic 20.0%
!!! TTTTGATAAAAATCGGAAAA+TGG - chr3_3:65336936-65336955 Msa0465080:CDS 20.0%
!! TTTGATAAAAATCGGAAAAT+GGG - chr3_3:65336937-65336956 Msa0465080:CDS 20.0%
!! ATAACAAGTACAATAATAGT+AGG + chr3_3:65338021-65338040 None:intergenic 20.0%
!!! CAAATTTTTTAGCAAATAAG+TGG + chr3_3:65338436-65338455 None:intergenic 20.0%
!! TCTTTACTTATATTCTGTAT+TGG - chr3_3:65338472-65338491 Msa0465080:CDS 20.0%
!!! ATTATTGTTTTTGACTATTG+AGG - chr3_3:65338904-65338923 Msa0465080:intron 20.0%
!!! TTATTGTTTTTGACTATTGA+GGG - chr3_3:65338905-65338924 Msa0465080:intron 20.0%
!!! AAACAAAATTTTTCTTCCTT+TGG - chr3_3:65339228-65339247 Msa0465080:intron 20.0%
!!! AACAAAATTTTTCTTCCTTT+GGG - chr3_3:65339229-65339248 Msa0465080:intron 20.0%
!! TTTCAACAAAAGAACAATAA+TGG - chr3_3:65339652-65339671 Msa0465080:intron 20.0%
!! TTTATCTTCATAATGATTGA+TGG + chr3_3:65339840-65339859 None:intergenic 20.0%
!!! AATATACTTTTCATTCATAG+TGG + chr3_3:65339999-65340018 None:intergenic 20.0%
!! AGAATGATAATTCTTAAAGA+AGG + chr3_3:65340336-65340355 None:intergenic 20.0%
!!! AGTTTTAAATTTAGCATACA+CGG + chr3_3:65340680-65340699 None:intergenic 20.0%
! GAAAGTTTAAATACAAGACA+AGG - chr3_3:65334420-65334439 Msa0465080:CDS 25.0%
! GAAGTAATTATAATTCAGGA+TGG + chr3_3:65335083-65335102 None:intergenic 25.0%
! ACAGGAAGTAATTATAATTC+AGG + chr3_3:65335087-65335106 None:intergenic 25.0%
! GGCATTCTACAATTATAATA+GGG + chr3_3:65335160-65335179 None:intergenic 25.0%
! AGGCATTCTACAATTATAAT+AGG + chr3_3:65335161-65335180 None:intergenic 25.0%
! TATTATAATTGTAGAATGCC+TGG - chr3_3:65335160-65335179 Msa0465080:intron 25.0%
!!! TATAATTTTTGAAGTAGGTC+AGG + chr3_3:65335329-65335348 None:intergenic 25.0%
! TGACCTACTTCAAAAATTAT+AGG - chr3_3:65335328-65335347 Msa0465080:intron 25.0%
!! TAAAAGCCTATTTTATGCTA+AGG - chr3_3:65335439-65335458 Msa0465080:intron 25.0%
!!! TAATAAGTTTTGGCCTATTT+AGG + chr3_3:65335489-65335508 None:intergenic 25.0%
! AAATAGGCCAAAACTTATTA+AGG - chr3_3:65335489-65335508 Msa0465080:CDS 25.0%
! ATATGAAAAACTTAATAGGC+CGG - chr3_3:65335664-65335683 Msa0465080:intron 25.0%
! TAAGGCCTATTTAATTAAAC+AGG + chr3_3:65335731-65335750 None:intergenic 25.0%
! ACTCTCAAAAACAAAAAACT+AGG + chr3_3:65336200-65336219 None:intergenic 25.0%
! CTTATAACAAACTCAAGATT+TGG + chr3_3:65336300-65336319 None:intergenic 25.0%
! CAAAAATAGAAATGCTACAT+AGG + chr3_3:65336666-65336685 None:intergenic 25.0%
! ATCTTTAGTCACTCTAATAT+AGG + chr3_3:65337418-65337437 None:intergenic 25.0%
! AAATAAAATGCTTACCCATT+TGG + chr3_3:65337995-65338014 None:intergenic 25.0%
!! TTCTTTTCGCAAATTATTAC+CGG - chr3_3:65338114-65338133 Msa0465080:CDS 25.0%
!! ATTTTCTTGGACAATAACAA+AGG - chr3_3:65338721-65338740 Msa0465080:intron 25.0%
! TGAAATTATCAAGGATTACT+TGG - chr3_3:65338747-65338766 Msa0465080:intron 25.0%
!! TCATTGATTAGAAATTCTTC+TGG + chr3_3:65338999-65339018 None:intergenic 25.0%
!! TAAATGCAATTTTCTCTTCA+GGG + chr3_3:65339033-65339052 None:intergenic 25.0%
! AATATAAATGCTTCAAAGCA+GGG - chr3_3:65339089-65339108 Msa0465080:intron 25.0%
!!! GGATTTTATGCAAATTTGTT+TGG - chr3_3:65339200-65339219 Msa0465080:intron 25.0%
! TTTCAGTCATTTGTTTCATT+CGG - chr3_3:65339398-65339417 Msa0465080:intron 25.0%
!!! TAATTTGTTCTTTCTGATAG+GGG + chr3_3:65339703-65339722 None:intergenic 25.0%
!!! GTAATTTGTTCTTTCTGATA+GGG + chr3_3:65339704-65339723 None:intergenic 25.0%
!!! TGTAATTTGTTCTTTCTGAT+AGG + chr3_3:65339705-65339724 None:intergenic 25.0%
! AAACTCGTGTTTAAATAGTA+AGG + chr3_3:65340141-65340160 None:intergenic 25.0%
!!! AAGAATAACAAAACGGATTA+AGG + chr3_3:65340388-65340407 None:intergenic 25.0%
! CATAAGATTATGAAAAGAAC+TGG - chr3_3:65340456-65340475 Msa0465080:intron 25.0%
!! TTTGTTTGCAGATTCATTTT+AGG - chr3_3:65340759-65340778 Msa0465080:CDS 25.0%
! ATTTTTCACAGGTAAGTCTT+TGG + chr3_3:65334378-65334397 None:intergenic 30.0%
TCATCATAGTGATGAATCAA+AGG - chr3_3:65334538-65334557 Msa0465080:intron 30.0%
CTTCAATGTTCTAACAAGAA+TGG - chr3_3:65334650-65334669 Msa0465080:CDS 30.0%
GAAGGAATATAATTGAGTGA+AGG + chr3_3:65334709-65334728 None:intergenic 30.0%
AATATGATGAAAACTTGCAC+AGG + chr3_3:65335105-65335124 None:intergenic 30.0%
!!! AGGCCTATAATTTTTGAAGT+AGG + chr3_3:65335334-65335353 None:intergenic 30.0%
! CTTTAGGCCTTAATAAGTTT+TGG + chr3_3:65335499-65335518 None:intergenic 30.0%
CAAACATATTTGTGTGCTTT+AGG + chr3_3:65335515-65335534 None:intergenic 30.0%
CCTATTTAATTAAACAGGTC+AGG + chr3_3:65335726-65335745 None:intergenic 30.0%
CCTGACCTGTTTAATTAAAT+AGG - chr3_3:65335723-65335742 Msa0465080:intron 30.0%
TTTACACTGTATTGTACGTA+GGG + chr3_3:65335857-65335876 None:intergenic 30.0%
! TTTTACACTGTATTGTACGT+AGG + chr3_3:65335858-65335877 None:intergenic 30.0%
GTACAATACAGTGTAAAACA+TGG - chr3_3:65335860-65335879 Msa0465080:intron 30.0%
AATTATAAAAAAGGGCAACC+CGG + chr3_3:65336078-65336097 None:intergenic 30.0%
GTAACAAATATCACATCCTA+AGG + chr3_3:65336399-65336418 None:intergenic 30.0%
! ATGTGATATTTGTTACATGC+AGG - chr3_3:65336403-65336422 Msa0465080:intron 30.0%
ATCATGAGGTAAAAAAGTCA+AGG + chr3_3:65336594-65336613 None:intergenic 30.0%
ATCTTGATTCATGAATCATG+AGG + chr3_3:65336608-65336627 None:intergenic 30.0%
ATAGAAATGCTACATAGGAT+TGG + chr3_3:65336661-65336680 None:intergenic 30.0%
TTCACAAAACAGTGGATATA+AGG + chr3_3:65336689-65336708 None:intergenic 30.0%
! TTATATCCACTGTTTTGTGA+AGG - chr3_3:65336688-65336707 Msa0465080:intron 30.0%
TTAATTGAAGCAGTTGAGTT+TGG + chr3_3:65336871-65336890 None:intergenic 30.0%
AAACTCAACTGCTTCAATTA+AGG - chr3_3:65336870-65336889 Msa0465080:intron 30.0%
AATTGATGAGATGAAATGTG+AGG + chr3_3:65336916-65336935 None:intergenic 30.0%
TCTTTCCTAAACTGAGAATT+GGG + chr3_3:65337249-65337268 None:intergenic 30.0%
ATCTTTCCTAAACTGAGAAT+TGG + chr3_3:65337250-65337269 None:intergenic 30.0%
AAAGATTTAGCAGAACTACA+AGG - chr3_3:65337264-65337283 Msa0465080:intron 30.0%
AAGATTTAGCAGAACTACAA+GGG - chr3_3:65337265-65337284 Msa0465080:intron 30.0%
AGCTGCTTCAAAATTAGTTA+AGG - chr3_3:65337368-65337387 Msa0465080:intron 30.0%
! AATATAGGTTTGTTCTTCAG+TGG + chr3_3:65337403-65337422 None:intergenic 30.0%
! TTGATGTACTTGTTAGTGTA+TGG - chr3_3:65337442-65337461 Msa0465080:CDS 30.0%
TTCCTTATGGGAATTCATTT+CGG - chr3_3:65337475-65337494 Msa0465080:CDS 30.0%
ATTCTTTACAAGATAATGCC+TGG - chr3_3:65337504-65337523 Msa0465080:CDS 30.0%
! ATGAAAGGTGTGATAGAAAA+TGG - chr3_3:65337603-65337622 Msa0465080:CDS 30.0%
! TGAAAGGTGTGATAGAAAAT+GGG - chr3_3:65337604-65337623 Msa0465080:CDS 30.0%
GATAAACAAAGAACATTTGC+TGG - chr3_3:65337710-65337729 Msa0465080:CDS 30.0%
!! ATGTGTTGCTGCATATTTTA+AGG - chr3_3:65337826-65337845 Msa0465080:CDS 30.0%
!!! TGGAATTTTAGTTATCCAGT+TGG - chr3_3:65337926-65337945 Msa0465080:CDS 30.0%
TGACTTCATTCTCTTCTAAT+AGG - chr3_3:65338210-65338229 Msa0465080:CDS 30.0%
!! TGTTACTGTAGCTTTAATTG+AGG - chr3_3:65338272-65338291 Msa0465080:CDS 30.0%
!! GTTACTGTAGCTTTAATTGA+GGG - chr3_3:65338273-65338292 Msa0465080:CDS 30.0%
!! TTACTGTAGCTTTAATTGAG+GGG - chr3_3:65338274-65338293 Msa0465080:CDS 30.0%
GATATTAGAGTTTGATGCTA+TGG - chr3_3:65338517-65338536 Msa0465080:intron 30.0%
!!! TGTGGAAGTTTTGATTTTGA+TGG - chr3_3:65338562-65338581 Msa0465080:intron 30.0%
ATTCTGTTGATGTATGCTTT+AGG + chr3_3:65338633-65338652 None:intergenic 30.0%
AAAGCATACATCAACAGAAT+TGG - chr3_3:65338633-65338652 Msa0465080:intron 30.0%
! GTTGCATTTGAGAATTTTCT+TGG - chr3_3:65338708-65338727 Msa0465080:intron 30.0%
CAAAGGAGTTGAAATTATCA+AGG - chr3_3:65338738-65338757 Msa0465080:intron 30.0%
TCTACATTCCAGAAATTGTT+TGG - chr3_3:65338966-65338985 Msa0465080:intron 30.0%
CTACATTCCAGAAATTGTTT+GGG - chr3_3:65338967-65338986 Msa0465080:intron 30.0%
TTGATTAGAAATTCTTCTGG+AGG + chr3_3:65338996-65339015 None:intergenic 30.0%
! GTAAATGCAATTTTCTCTTC+AGG + chr3_3:65339034-65339053 None:intergenic 30.0%
GAAGAGAAAATTGCATTTAC+AGG - chr3_3:65339034-65339053 Msa0465080:intron 30.0%
GCATTTACAGGTACTAAATT+TGG - chr3_3:65339046-65339065 Msa0465080:intron 30.0%
CAATATAAATGCTTCAAAGC+AGG - chr3_3:65339088-65339107 Msa0465080:intron 30.0%
TGTTATCAATATCTTCCCAA+AGG + chr3_3:65339247-65339266 None:intergenic 30.0%
ATCAATGTGACTTTGACAAA+AGG + chr3_3:65339555-65339574 None:intergenic 30.0%
TTGACAGTTTGACAGAATTA+CGG + chr3_3:65339581-65339600 None:intergenic 30.0%
TCAATCAAAGCATACATGAT+GGG - chr3_3:65339597-65339616 Msa0465080:intron 30.0%
AAAGAACAATAATGGCATTG+TGG - chr3_3:65339660-65339679 Msa0465080:intron 30.0%
! TGATTGATGGTTACCTTAAT+TGG + chr3_3:65339827-65339846 None:intergenic 30.0%
GCTATCATGTTCATATCATA+AGG + chr3_3:65339893-65339912 None:intergenic 30.0%
! AAATCCTTTTCAATCTCTTG+AGG - chr3_3:65339941-65339960 Msa0465080:intron 30.0%
ATTTCCTCAAGAGATTGAAA+AGG + chr3_3:65339948-65339967 None:intergenic 30.0%
! AGCATTTTCTTTGTTGCAAA+AGG - chr3_3:65340090-65340109 Msa0465080:intron 30.0%
TCGACGATAATGTTGTAAAA+TGG - chr3_3:65340114-65340133 Msa0465080:intron 30.0%
CTATTATCACTGAAAGCTTA+GGG + chr3_3:65340175-65340194 None:intergenic 30.0%
TCTATTATCACTGAAAGCTT+AGG + chr3_3:65340176-65340195 None:intergenic 30.0%
AGCTTTCAGTGATAATAGAA+AGG - chr3_3:65340177-65340196 Msa0465080:intron 30.0%
AAACATAGAACACACAATGT+TGG + chr3_3:65340264-65340283 None:intergenic 30.0%
!! TCAGTGATGGAAATTTTTGA+TGG - chr3_3:65340420-65340439 Msa0465080:intron 30.0%
!! CAGTGATGGAAATTTTTGAT+GGG - chr3_3:65340421-65340440 Msa0465080:intron 30.0%
!! AGTGATGGAAATTTTTGATG+GGG - chr3_3:65340422-65340441 Msa0465080:intron 30.0%
TATGAAAAGAACTGGTTGTA+TGG - chr3_3:65340464-65340483 Msa0465080:intron 30.0%
ATGTTACGTACCAATTTAAC+AGG - chr3_3:65340538-65340557 Msa0465080:intron 30.0%
AATGAAGTTATGATCCTCAA+TGG - chr3_3:65340633-65340652 Msa0465080:CDS 30.0%
AAATATCAGACTCTCTTCTA+TGG + chr3_3:65340740-65340759 None:intergenic 30.0%
ATGTATACATTGGCATTATG+TGG - chr3_3:65340828-65340847 Msa0465080:CDS 30.0%
! TTCACACGAGAATTTTTCAC+AGG + chr3_3:65334389-65334408 None:intergenic 35.0%
ACAAACTCCTCGTTCAAAAT+GGG + chr3_3:65334467-65334486 None:intergenic 35.0%
AACAAACTCCTCGTTCAAAA+TGG + chr3_3:65334468-65334487 None:intergenic 35.0%
!!! GAACGAGGAGTTTGTTTTTA+AGG - chr3_3:65334472-65334491 Msa0465080:CDS 35.0%
!!! GGAGTTTGTTTTTAAGGTGA+AGG - chr3_3:65334478-65334497 Msa0465080:CDS 35.0%
TAGTGATGAATCAAAGGTAG+TGG - chr3_3:65334544-65334563 Msa0465080:intron 35.0%
!!! TCAAAGGTAGTGGATTTTGT+TGG - chr3_3:65334554-65334573 Msa0465080:intron 35.0%
CAACGTGATCATCTAAAAGA+AGG + chr3_3:65334727-65334746 None:intergenic 35.0%
! TTTGTATTTTCTTCGGGTCT+AGG - chr3_3:65334997-65335016 Msa0465080:intron 35.0%
GTTGTTGTCATGTGATTGAA+AGG - chr3_3:65335196-65335215 Msa0465080:intron 35.0%
! CTTACCATGTTTTACACAAG+AGG + chr3_3:65335247-65335266 None:intergenic 35.0%
CTCTTGTGTAAAACATGGTA+AGG - chr3_3:65335245-65335264 Msa0465080:intron 35.0%
!! GCTTCATCAGGCTTTTAAAA+AGG + chr3_3:65335406-65335425 None:intergenic 35.0%
! AGGCTTTTAAATAGGCTTTC+AGG + chr3_3:65335428-65335447 None:intergenic 35.0%
ATGTAAGCCTACTCCTAAAT+AGG - chr3_3:65335473-65335492 Msa0465080:intron 35.0%
TAATTAAACAGGTCAGGCTA+AGG + chr3_3:65335720-65335739 None:intergenic 35.0%
TTACACTGTATTGTACGTAG+GGG + chr3_3:65335856-65335875 None:intergenic 35.0%
GTGCAATAGAGCTCAAAAAA+GGG + chr3_3:65335966-65335985 None:intergenic 35.0%
!!! TTTTTTGAGCTCTATTGCAC+CGG - chr3_3:65335966-65335985 Msa0465080:CDS 35.0%
GTGCAATAGAGCTCAAAAAA+GGG + chr3_3:65335966-65335985 None:intergenic 35.0%
!!! TTTTTTGAGCTCTATTGCAC+CGG - chr3_3:65335966-65335985 Msa0465080:CDS 35.0%
ATGCTGAAACTTTGCTAGAT+AGG - chr3_3:65336103-65336122 Msa0465080:CDS 35.0%
TGCTGAAACTTTGCTAGATA+GGG - chr3_3:65336104-65336123 Msa0465080:CDS 35.0%
GCATTATTTCAACGTTGATG+TGG - chr3_3:65336172-65336191 Msa0465080:intron 35.0%
!! TATGTTGAGAAGAGTGTTAG+AGG + chr3_3:65336476-65336495 None:intergenic 35.0%
GTTAAACCTTCACAAAACAG+TGG + chr3_3:65336697-65336716 None:intergenic 35.0%
GCTTGTGTTGTACATAATCA+GGG - chr3_3:65336779-65336798 Msa0465080:CDS 35.0%
AAAAATCGGAAAATGGGTGA+AGG - chr3_3:65336943-65336962 Msa0465080:CDS 35.0%
TTATCGCTAATCGCATAGAA+AGG - chr3_3:65336983-65337002 Msa0465080:CDS 35.0%
! TGATGTTTCTGAACAATCCA+CGG + chr3_3:65337040-65337059 None:intergenic 35.0%
TGCCTTCTTCAAAACTACAA+GGG + chr3_3:65337107-65337126 None:intergenic 35.0%
ATGCCTTCTTCAAAACTACA+AGG + chr3_3:65337108-65337127 None:intergenic 35.0%
!! AATTTTCAGGACTTTCTGGT+CGG + chr3_3:65337155-65337174 None:intergenic 35.0%
!! TGCAAATTTTCAGGACTTTC+TGG + chr3_3:65337159-65337178 None:intergenic 35.0%
AGAAAGTCCTGAAAATTTGC+AGG - chr3_3:65337158-65337177 Msa0465080:intron 35.0%
GAAAGTCCTGAAAATTTGCA+GGG - chr3_3:65337159-65337178 Msa0465080:intron 35.0%
GGACAACAAATTTGCAAGAA+GGG - chr3_3:65337286-65337305 Msa0465080:intron 35.0%
GACAACAAATTTGCAAGAAG+GGG - chr3_3:65337287-65337306 Msa0465080:intron 35.0%
AGACATATCTTCATCTTTCC+AGG + chr3_3:65337319-65337338 None:intergenic 35.0%
TCCTTATGGGAATTCATTTC+GGG - chr3_3:65337476-65337495 Msa0465080:CDS 35.0%
AGAAGATTTGTCTTGTGTAG+AGG - chr3_3:65337527-65337546 Msa0465080:CDS 35.0%
CTCACATCTTGTGATATCAT+GGG - chr3_3:65337554-65337573 Msa0465080:CDS 35.0%
TCACATCTTGTGATATCATG+GGG - chr3_3:65337555-65337574 Msa0465080:CDS 35.0%
CTTTCATCATTGTGCTTTGT+AGG + chr3_3:65337590-65337609 None:intergenic 35.0%
CTACAAAGCACAATGATGAA+AGG - chr3_3:65337588-65337607 Msa0465080:CDS 35.0%
! GAAAGGTGTGATAGAAAATG+GGG - chr3_3:65337605-65337624 Msa0465080:CDS 35.0%
ATAGAAAATGGGGCTAAACA+AGG - chr3_3:65337615-65337634 Msa0465080:CDS 35.0%
!!! TTGCTGCATATTTTAAGGTG+TGG - chr3_3:65337831-65337850 Msa0465080:CDS 35.0%
TTAGGAGAACTAGTAACAAG+TGG - chr3_3:65337906-65337925 Msa0465080:CDS 35.0%
! TTTCAGATTGAAGGTGTATC+CGG - chr3_3:65338068-65338087 Msa0465080:CDS 35.0%
!! AAAAGTGTCTTGTTGGTGTT+AGG + chr3_3:65338096-65338115 None:intergenic 35.0%
!! CGAAAAGAAAAGTGTCTTGT+TGG + chr3_3:65338103-65338122 None:intergenic 35.0%
!! TACTGTAGCTTTAATTGAGG+GGG - chr3_3:65338275-65338294 Msa0465080:CDS 35.0%
! TGATCTTGTTTGTCCATTAC+AGG + chr3_3:65338355-65338374 None:intergenic 35.0%
ACTTCCACATACAAAACTGA+TGG + chr3_3:65338551-65338570 None:intergenic 35.0%
GAGAAGAAGGAAAAAGAAGT+AGG - chr3_3:65338769-65338788 Msa0465080:intron 35.0%
GGAAAAAGAAGTAGGCAAAA+AGG - chr3_3:65338777-65338796 Msa0465080:intron 35.0%
ACACACACACACACATATAT+GGG + chr3_3:65338824-65338843 None:intergenic 35.0%
TGGAATGTAGAATTCCTTTG+AGG + chr3_3:65338957-65338976 None:intergenic 35.0%
CTTCCTAATGATGCTAATGA+TGG + chr3_3:65339284-65339303 None:intergenic 35.0%
GAAGAATTATGGCCAATGTA+GGG + chr3_3:65339307-65339326 None:intergenic 35.0%
CAAGTTTGACAAAATCACAG+TGG - chr3_3:65339497-65339516 Msa0465080:intron 35.0%
GTCAATCAAAGCATACATGA+TGG - chr3_3:65339596-65339615 Msa0465080:intron 35.0%
! ACATTTTTGCCTCATCTTCT+AGG + chr3_3:65339781-65339800 None:intergenic 35.0%
CTTCAAAACTTCGCAAATGT+GGG + chr3_3:65339870-65339889 None:intergenic 35.0%
TTTGCATTGCTGAATTCAAG+AGG + chr3_3:65340068-65340087 None:intergenic 35.0%
CCTGTGCAAGAATAACAAAA+CGG + chr3_3:65340395-65340414 None:intergenic 35.0%
!! GTGATGGAAATTTTTGATGG+GGG - chr3_3:65340423-65340442 Msa0465080:intron 35.0%
TAAAACCTGATGTACTCGAA+AGG - chr3_3:65340514-65340533 Msa0465080:intron 35.0%
TATCCAAACACAAACACTGA+AGG - chr3_3:65340600-65340619 Msa0465080:intron 35.0%
GAAATTGAGAAATCAGCTCT+TGG - chr3_3:65340785-65340804 Msa0465080:CDS 35.0%
TGCAAGTGTGATGTATACAT+TGG - chr3_3:65340818-65340837 Msa0465080:CDS 35.0%
! ATCCAAGTTTAAAGTTCGAC+TGG - chr3_3:65340895-65340914 Msa0465080:CDS 35.0%
TCTCGTGTGAAGCTTAAACT+TGG - chr3_3:65334398-65334417 Msa0465080:CDS 40.0%
! GTTCAATCCCATTTTGAACG+AGG - chr3_3:65334457-65334476 Msa0465080:CDS 40.0%
TAAGGTGAAGGATATTGCTG+AGG - chr3_3:65334490-65334509 Msa0465080:CDS 40.0%
!! TGGATTTTGTTGGTGAGGTA+CGG - chr3_3:65334564-65334583 Msa0465080:intron 40.0%
AGCAAATATTGCCACCTACT+TGG - chr3_3:65334621-65334640 Msa0465080:intron 40.0%
GTCATGTGATTGAAAGGTCA+CGG - chr3_3:65335202-65335221 Msa0465080:intron 40.0%
TCATGTGATTGAAAGGTCAC+GGG - chr3_3:65335203-65335222 Msa0465080:intron 40.0%
ACAGCCTCTTGTGTAAAACA+TGG - chr3_3:65335240-65335259 Msa0465080:intron 40.0%
TGGTAAGGTTGCGTACAATT+AGG - chr3_3:65335260-65335279 Msa0465080:intron 40.0%
GGTAAGGTTGCGTACAATTA+GGG - chr3_3:65335261-65335280 Msa0465080:intron 40.0%
GTAAGGTTGCGTACAATTAG+GGG - chr3_3:65335262-65335281 Msa0465080:intron 40.0%
GTACAATTAGGGGTGGAAAT+GGG - chr3_3:65335272-65335291 Msa0465080:intron 40.0%
!!! TTTTGAAGTAGGTCAGGCTT+AGG + chr3_3:65335323-65335342 None:intergenic 40.0%
AAAAATTATAGGCCTGAGCC+TGG - chr3_3:65335339-65335358 Msa0465080:intron 40.0%
!! ATCAGGCTTTTAAAAAGGCC+AGG + chr3_3:65335401-65335420 None:intergenic 40.0%
! GCCTATTTTATGCTAAGGCT+TGG - chr3_3:65335444-65335463 Msa0465080:intron 40.0%
GCCAAGCCTTAGCATAAAAT+AGG + chr3_3:65335448-65335467 None:intergenic 40.0%
!! GTTTTGGCCTATTTAGGAGT+AGG + chr3_3:65335483-65335502 None:intergenic 40.0%
AAAAGCCTATTAAGCCCATC+AGG + chr3_3:65335690-65335709 None:intergenic 40.0%
! CCAGGCTCAAGCTTTTTATA+AGG + chr3_3:65335749-65335768 None:intergenic 40.0%
CCTTATAAAAAGCTTGAGCC+TGG - chr3_3:65335746-65335765 Msa0465080:intron 40.0%
! GCCTTGTTAATAAACGAGCT+AGG - chr3_3:65335768-65335787 Msa0465080:intron 40.0%
GCCTAGCTCGTTTATTAACA+AGG + chr3_3:65335772-65335791 None:intergenic 40.0%
! AGCCTATTTAAAGCCTAGCT+CGG + chr3_3:65335794-65335813 None:intergenic 40.0%
!! AGCTAGGCTTTAAATAGGCT+AGG - chr3_3:65335794-65335813 Msa0465080:intron 40.0%
CTTTAAATAGGCTAGGCTGT+AGG - chr3_3:65335801-65335820 Msa0465080:intron 40.0%
GTTGCGTACAATACACCAAA+TGG - chr3_3:65335887-65335906 Msa0465080:intron 40.0%
CGTACAATACACCAAATGGT+GGG - chr3_3:65335891-65335910 Msa0465080:intron 40.0%
GGTGCAATAGAGCTCAAAAA+AGG + chr3_3:65335967-65335986 None:intergenic 40.0%
!! TTTTTGAGCTCTATTGCACC+GGG - chr3_3:65335967-65335986 Msa0465080:CDS 40.0%
GGTGCAATAGAGCTCAAAAA+AGG + chr3_3:65335967-65335986 None:intergenic 40.0%
!! TTTTTGAGCTCTATTGCACC+GGG - chr3_3:65335967-65335986 Msa0465080:CDS 40.0%
GCTGAAACTTTGCTAGATAG+GGG - chr3_3:65336105-65336124 Msa0465080:CDS 40.0%
GGCTTGTGTTGTACATAATC+AGG - chr3_3:65336778-65336797 Msa0465080:CDS 40.0%
AGATGAAATGTGAGGACGTT+CGG + chr3_3:65336908-65336927 None:intergenic 40.0%
TGAAGGCAAACAGTTGTTGA+AGG - chr3_3:65336960-65336979 Msa0465080:CDS 40.0%
AGAACGAAACTCAAAATCCG+TGG - chr3_3:65337020-65337039 Msa0465080:CDS 40.0%
! TACAAGGGGGTGAATTTTCT+TGG + chr3_3:65337092-65337111 None:intergenic 40.0%
CCTTCTTCAAAACTACAAGG+GGG + chr3_3:65337105-65337124 None:intergenic 40.0%
GCCTTCTTCAAAACTACAAG+GGG + chr3_3:65337106-65337125 None:intergenic 40.0%
!! TGAAGAAGGCATTGCACTAA+TGG - chr3_3:65337116-65337135 Msa0465080:intron 40.0%
GGGACAACAAATTTGCAAGA+AGG - chr3_3:65337285-65337304 Msa0465080:intron 40.0%
CAAATTTGCAAGAAGGGGAT+TGG - chr3_3:65337292-65337311 Msa0465080:intron 40.0%
AATTCCCATAAGGAACCTCA+GGG + chr3_3:65337470-65337489 None:intergenic 40.0%
ACCCGAAATGAATTCCCATA+AGG + chr3_3:65337480-65337499 None:intergenic 40.0%
ACACAAGACAAATCTTCTCC+AGG + chr3_3:65337525-65337544 None:intergenic 40.0%
CCATGATATCACAAGATGTG+AGG + chr3_3:65337556-65337575 None:intergenic 40.0%
CCTCACATCTTGTGATATCA+TGG - chr3_3:65337553-65337572 Msa0465080:CDS 40.0%
TCTTGTGATATCATGGGGAA+TGG - chr3_3:65337560-65337579 Msa0465080:CDS 40.0%
! GAGGTTTAAGGTGCTAGATA+AGG - chr3_3:65337680-65337699 Msa0465080:CDS 40.0%
! GTTTAAGGTGCTAGATAAGG+AGG - chr3_3:65337683-65337702 Msa0465080:CDS 40.0%
ATTGAACTGCCAGATAGCTT+AGG - chr3_3:65337888-65337907 Msa0465080:CDS 40.0%
! ACTAGTTCTCCTAAGCTATC+TGG + chr3_3:65337900-65337919 None:intergenic 40.0%
TATGATAAACACGCTCCAAC+TGG + chr3_3:65337944-65337963 None:intergenic 40.0%
GTTGGAGCGTGTTTATCATA+TGG - chr3_3:65337944-65337963 Msa0465080:CDS 40.0%
TGTGCAAGCTAGATTCCAAA+TGG - chr3_3:65337977-65337996 Msa0465080:CDS 40.0%
GTGCAAGCTAGATTCCAAAT+GGG - chr3_3:65337978-65337997 Msa0465080:CDS 40.0%
CACCAACACTTTCAGATTGA+AGG - chr3_3:65338059-65338078 Msa0465080:CDS 40.0%
! CACCTTCAATCTGAAAGTGT+TGG + chr3_3:65338064-65338083 None:intergenic 40.0%
!! ATGAAGTGCTGACACAGATA+CGG + chr3_3:65338156-65338175 None:intergenic 40.0%
CTTCTAATAGGAACTGACCA+TGG - chr3_3:65338222-65338241 Msa0465080:CDS 40.0%
TAGTCTCATTGGAGTCAACA+GGG - chr3_3:65338304-65338323 Msa0465080:CDS 40.0%
TTGAGACATCAGATCCTCAA+TGG - chr3_3:65338388-65338407 Msa0465080:CDS 40.0%
ACATCAGATCCTCAATGGAA+TGG - chr3_3:65338393-65338412 Msa0465080:CDS 40.0%
AAGGACAAACCATTCCATTG+AGG + chr3_3:65338405-65338424 None:intergenic 40.0%
CAAATAAGTGGCAAGACAGA+AGG + chr3_3:65338424-65338443 None:intergenic 40.0%
!! ACCACCATCAGTTTTGTATG+TGG - chr3_3:65338544-65338563 Msa0465080:intron 40.0%
TCCACATACAAAACTGATGG+TGG + chr3_3:65338548-65338567 None:intergenic 40.0%
!! TTTTGATGGTCCATTTGACC+AGG - chr3_3:65338576-65338595 Msa0465080:intron 40.0%
AGTGAAACATCCTGGTCAAA+TGG + chr3_3:65338589-65338608 None:intergenic 40.0%
TTTGACCAGGATGTTTCACT+TGG - chr3_3:65338589-65338608 Msa0465080:intron 40.0%
AACAGAATTGGCAGACATGT+GGG - chr3_3:65338645-65338664 Msa0465080:intron 40.0%
CAAGGATTACTTGGAGAAGA+AGG - chr3_3:65338756-65338775 Msa0465080:intron 40.0%
CACACACACACACATATATG+GGG + chr3_3:65338823-65338842 None:intergenic 40.0%
CACACACACACACACATATA+TGG + chr3_3:65338825-65338844 None:intergenic 40.0%
TCAATCTTCCATCACCTCAA+AGG - chr3_3:65338940-65338959 Msa0465080:intron 40.0%
!! GTAGAATTCCTTTGAGGTGA+TGG + chr3_3:65338951-65338970 None:intergenic 40.0%
ATGACCATGACTTCTAATGC+AGG - chr3_3:65339148-65339167 Msa0465080:intron 40.0%
TGACCATGACTTCTAATGCA+GGG - chr3_3:65339149-65339168 Msa0465080:intron 40.0%
!! TCGGCTATTTCTTTCTGCAA+GGG - chr3_3:65339172-65339191 Msa0465080:intron 40.0%
ATTTCTTTCTGCAAGGGTTC+TGG - chr3_3:65339178-65339197 Msa0465080:intron 40.0%
TTTCTTTCTGCAAGGGTTCT+GGG - chr3_3:65339179-65339198 Msa0465080:intron 40.0%
CCTAATGATGCTAATGATGG+AGG + chr3_3:65339281-65339300 None:intergenic 40.0%
CCTCCATCATTAGCATCATT+AGG - chr3_3:65339278-65339297 Msa0465080:intron 40.0%
ATCATTAGGAAGCCCTACAT+TGG - chr3_3:65339292-65339311 Msa0465080:intron 40.0%
CGAAGAATTATGGCCAATGT+AGG + chr3_3:65339308-65339327 None:intergenic 40.0%
TTGGCCATAATTCTTCGAAG+AGG - chr3_3:65339311-65339330 Msa0465080:intron 40.0%
TCGTCCTCTTCGAAGAATTA+TGG + chr3_3:65339318-65339337 None:intergenic 40.0%
ATAATTCTTCGAAGAGGACG+AGG - chr3_3:65339317-65339336 Msa0465080:intron 40.0%
AAGATGAAGAAGGAAGGCTT+AGG - chr3_3:65339369-65339388 Msa0465080:intron 40.0%
! TGCTGATTAAGAATACCTGG+AGG + chr3_3:65339429-65339448 None:intergenic 40.0%
! GCATGCTGATTAAGAATACC+TGG + chr3_3:65339432-65339451 None:intergenic 40.0%
TTATCAGTTGAGTGCATGCT+TGG - chr3_3:65339466-65339485 Msa0465080:intron 40.0%
! AGAAGAGCATGAAGATCAAG+AGG - chr3_3:65339724-65339743 Msa0465080:intron 40.0%
TGGATCTATCCTAGAAGATG+AGG - chr3_3:65339769-65339788 Msa0465080:intron 40.0%
AAGATGAGGCAAAAATGTCC+AGG - chr3_3:65339783-65339802 Msa0465080:intron 40.0%
TAGTTCAGCAGAGTAAATCC+TGG + chr3_3:65339804-65339823 None:intergenic 40.0%
CTCTGCTGAACTACCAATTA+AGG - chr3_3:65339811-65339830 Msa0465080:intron 40.0%
GCTTCAAAACTTCGCAAATG+TGG + chr3_3:65339871-65339890 None:intergenic 40.0%
GAACACACAATGTTGGATCA+CGG + chr3_3:65340257-65340276 None:intergenic 40.0%
!! AAACGGATTAAGGAGAGACT+TGG + chr3_3:65340378-65340397 None:intergenic 40.0%
!!! CCGTTTTGTTATTCTTGCAC+AGG - chr3_3:65340392-65340411 Msa0465080:intron 40.0%
! TCGAGTACATCAGGTTTTAC+TGG + chr3_3:65340513-65340532 None:intergenic 40.0%
CTGACACATGCCTGTTAAAT+TGG + chr3_3:65340551-65340570 None:intergenic 40.0%
CTTCCTTCAGTGTTTGTGTT+TGG + chr3_3:65340606-65340625 None:intergenic 40.0%
CAAACACAAACACTGAAGGA+AGG - chr3_3:65340604-65340623 Msa0465080:intron 40.0%
ACACGGAAGTGATCAGAAAA+TGG + chr3_3:65340663-65340682 None:intergenic 40.0%
ACATTGGCATTATGTGGCTT+AGG - chr3_3:65340834-65340853 Msa0465080:CDS 40.0%
AGTTTCAGCAAAGGATCAAC+AGG - chr3_3:65340864-65340883 Msa0465080:CDS 40.0%
CTCCAGTCGAACTTTAAACT+TGG + chr3_3:65340900-65340919 None:intergenic 40.0%
! CAAGTTTAAAGTTCGACTGG+AGG - chr3_3:65340898-65340917 Msa0465080:CDS 40.0%
!!! GGTAGTGGATTTTGTTGGTG+AGG - chr3_3:65334559-65334578 Msa0465080:intron 45.0%
TCAAAACCAACCTCACCAAC+AGG + chr3_3:65334593-65334612 None:intergenic 45.0%
!!! TGTTGGTGAGGTTGGTTTTG+AGG - chr3_3:65334592-65334611 Msa0465080:intron 45.0%
CATTGAAGCTCGAACCAAGT+AGG + chr3_3:65334638-65334657 None:intergenic 45.0%
TGGATAGCTCGCTTGAGTTA+AGG + chr3_3:65335063-65335082 None:intergenic 45.0%
! TTACACAAGAGGCTGTTTCC+AGG + chr3_3:65335236-65335255 None:intergenic 45.0%
CGTACAATTAGGGGTGGAAA+TGG - chr3_3:65335271-65335290 Msa0465080:intron 45.0%
CTCGAAAATGAGCCTATGAC+GGG + chr3_3:65335372-65335391 None:intergenic 45.0%
CCTCGAAAATGAGCCTATGA+CGG + chr3_3:65335373-65335392 None:intergenic 45.0%
ATAGGCTTTCAGGCTTCATC+AGG + chr3_3:65335418-65335437 None:intergenic 45.0%
GCTCGTTTATTAACAAGGCC+AGG + chr3_3:65335767-65335786 None:intergenic 45.0%
ACTGTATTGTACGTAGGGGT+GGG + chr3_3:65335852-65335871 None:intergenic 45.0%
GCGTACAATACACCAAATGG+TGG - chr3_3:65335890-65335909 Msa0465080:intron 45.0%
AGCTCAAAAAAGGGAAACCC+CGG + chr3_3:65335957-65335976 None:intergenic 45.0%
!!! CCCCCTTGTAGTTTTGAAGA+AGG - chr3_3:65337102-65337121 Msa0465080:intron 45.0%
AGTCCTGAAAATTTGCAGGG+CGG - chr3_3:65337162-65337181 Msa0465080:intron 45.0%
! ATACCGCCCTGCAAATTTTC+AGG + chr3_3:65337168-65337187 None:intergenic 45.0%
ATTCCCATAAGGAACCTCAG+GGG + chr3_3:65337469-65337488 None:intergenic 45.0%
GAATTCCCATAAGGAACCTC+AGG + chr3_3:65337471-65337490 None:intergenic 45.0%
TGGGGCTAAACAAGGTTTGA+AGG - chr3_3:65337623-65337642 Msa0465080:CDS 45.0%
GAGCAAGTAGGTTAGCAAAC+TGG + chr3_3:65337659-65337678 None:intergenic 45.0%
TTGCTAACCTACTTGCTCAG+AGG - chr3_3:65337661-65337680 Msa0465080:CDS 45.0%
CCTTAAACCTCTGAGCAAGT+AGG + chr3_3:65337671-65337690 None:intergenic 45.0%
CCTACTTGCTCAGAGGTTTA+AGG - chr3_3:65337668-65337687 Msa0465080:CDS 45.0%
AGACAGAAAGCCAGTGGAAT+TGG - chr3_3:65337742-65337761 Msa0465080:CDS 45.0%
GGCAGGCAATTACATACTTC+TGG - chr3_3:65337766-65337785 Msa0465080:CDS 45.0%
!! TGAAAGCACATGGTGATGGA+TGG - chr3_3:65338247-65338266 Msa0465080:CDS 45.0%
!! GAAAGCACATGGTGATGGAT+GGG - chr3_3:65338248-65338267 Msa0465080:CDS 45.0%
!! CTGTTGACTCCAATGAGACT+AGG + chr3_3:65338305-65338324 None:intergenic 45.0%
CTAGTCTCATTGGAGTCAAC+AGG - chr3_3:65338303-65338322 Msa0465080:CDS 45.0%
CATGTCCAAGTGAAACATCC+TGG + chr3_3:65338597-65338616 None:intergenic 45.0%
CAACAGAATTGGCAGACATG+TGG - chr3_3:65338644-65338663 Msa0465080:intron 45.0%
CAACTTCGATTGAGCAGACT+GGG + chr3_3:65338692-65338711 None:intergenic 45.0%
GAGGCAACCCAAACAATTTC+TGG + chr3_3:65338977-65338996 None:intergenic 45.0%
CATGACTTCTAATGCAGGGT+CGG - chr3_3:65339153-65339172 Msa0465080:intron 45.0%
!! GTCGGCTATTTCTTTCTGCA+AGG - chr3_3:65339171-65339190 Msa0465080:intron 45.0%
TCCTTCTTCATCTTGCGTCT+TGG + chr3_3:65339363-65339382 None:intergenic 45.0%
AGACGCAAGATGAAGAAGGA+AGG - chr3_3:65339363-65339382 Msa0465080:intron 45.0%
TGAGTGCATGCTTGGAATCA+CGG - chr3_3:65339474-65339493 Msa0465080:intron 45.0%
GCATGAAGATCAAGAGGTCT+TGG - chr3_3:65339730-65339749 Msa0465080:intron 45.0%
!! TTGGTAATGCCTGAAGACTC+TGG - chr3_3:65339749-65339768 Msa0465080:intron 45.0%
AGGATAGATCCAGAGTCTTC+AGG + chr3_3:65339761-65339780 None:intergenic 45.0%
AGGTTGACACAACAGCAAAC+AGG + chr3_3:65340316-65340335 None:intergenic 45.0%
TGCACAGGTAAGTTCAGTGA+TGG - chr3_3:65340407-65340426 Msa0465080:intron 45.0%
TGGACTATGACACTACACCT+TGG - chr3_3:65340484-65340503 Msa0465080:intron 45.0%
GGACTATGACACTACACCTT+GGG - chr3_3:65340485-65340504 Msa0465080:intron 45.0%
!!! TCAGGTTTTACTGGTTCCCA+AGG + chr3_3:65340504-65340523 None:intergenic 45.0%
! ACATGCCTTTCGAGTACATC+AGG + chr3_3:65340522-65340541 None:intergenic 45.0%
CAGAAAATGGAACGCCATTG+AGG + chr3_3:65340650-65340669 None:intergenic 45.0%
!! GGAGCTCTAAGTTTCAGCAA+AGG - chr3_3:65340855-65340874 Msa0465080:CDS 45.0%
TGAAGCTCGAACCAAGTAGG+TGG + chr3_3:65334635-65334654 None:intergenic 50.0%
ACAACTTTACCAGTTGCGCC+AGG + chr3_3:65335181-65335200 None:intergenic 50.0%
AGGTTGCGTACAATTAGGGG+TGG - chr3_3:65335265-65335284 Msa0465080:intron 50.0%
! ATTAGGGGTGGAAATGGGCT+AGG - chr3_3:65335277-65335296 Msa0465080:intron 50.0%
!! ATGAGCCTATGACGGGTAAC+AGG + chr3_3:65335365-65335384 None:intergenic 50.0%
! CCGTCATAGGCTCATTTTCG+AGG - chr3_3:65335370-65335389 Msa0465080:intron 50.0%
!! ATAGGCTCATTTTCGAGGCC+TGG - chr3_3:65335375-65335394 Msa0465080:intron 50.0%
!! GCTTTTAAAAAGGCCAGGCC+AGG + chr3_3:65335396-65335415 None:intergenic 50.0%
AACTTAATAGGCCGGCCTGA+TGG - chr3_3:65335672-65335691 Msa0465080:intron 50.0%
ACTTAATAGGCCGGCCTGAT+GGG - chr3_3:65335673-65335692 Msa0465080:intron 50.0%
!! GGCCGAGCTAGGCTTTAAAT+AGG - chr3_3:65335789-65335808 Msa0465080:intron 50.0%
TTGTACGTAGGGGTGGGAAT+AGG + chr3_3:65335846-65335865 None:intergenic 50.0%
CACTGTATTGTACGTAGGGG+TGG + chr3_3:65335853-65335872 None:intergenic 50.0%
ATAGAGCTCCCGCATATGCA+GGG + chr3_3:65335930-65335949 None:intergenic 50.0%
AATAGAGCTCCCGCATATGC+AGG + chr3_3:65335931-65335950 None:intergenic 50.0%
ATAGAGCTCCCGCATATGCA+GGG + chr3_3:65335930-65335949 None:intergenic 50.0%
AATAGAGCTCCCGCATATGC+AGG + chr3_3:65335931-65335950 None:intergenic 50.0%
TCGCGCCCAATTCTCAGTTT+AGG - chr3_3:65337241-65337260 Msa0465080:intron 50.0%
TGTTAGTGTATGGACCCCTG+AGG - chr3_3:65337452-65337471 Msa0465080:CDS 50.0%
CTTTGCAGACAGAAAGCCAG+TGG - chr3_3:65337736-65337755 Msa0465080:CDS 50.0%
CAGAAAGCCAGTGGAATTGG+TGG - chr3_3:65337745-65337764 Msa0465080:CDS 50.0%
!! GTCTTGTTGGTGTTAGGCAC+CGG + chr3_3:65338090-65338109 None:intergenic 50.0%
! GACCATGGCATGAAAGCACA+TGG - chr3_3:65338237-65338256 Msa0465080:CDS 50.0%
CACCATGTGCTTTCATGCCA+TGG + chr3_3:65338242-65338261 None:intergenic 50.0%
! GGCATGAAAGCACATGGTGA+TGG - chr3_3:65338243-65338262 Msa0465080:CDS 50.0%
GCAACTTCGATTGAGCAGAC+TGG + chr3_3:65338693-65338712 None:intergenic 50.0%
CGACCCTGCATTAGAAGTCA+TGG + chr3_3:65339155-65339174 None:intergenic 50.0%
GCCAAGACGCAAGATGAAGA+AGG - chr3_3:65339359-65339378 Msa0465080:intron 50.0%
TTTCATTCGGTTCTGCCTCC+AGG - chr3_3:65339411-65339430 Msa0465080:intron 50.0%
TGGAGACGTAGACACAGTTG+AGG - chr3_3:65340226-65340245 Msa0465080:intron 50.0%
GGAGACGTAGACACAGTTGA+GGG - chr3_3:65340227-65340246 Msa0465080:intron 50.0%
GGTGAGGTACGGATTCCTGT+TGG - chr3_3:65334575-65334594 Msa0465080:intron 55.0%
GGTACGGATTCCTGTTGGTG+AGG - chr3_3:65334580-65334599 Msa0465080:intron 55.0%
! CGGATTCCTGTTGGTGAGGT+TGG - chr3_3:65334584-65334603 Msa0465080:intron 55.0%
TGTAGAATGCCTGGCGCAAC+TGG - chr3_3:65335169-65335188 Msa0465080:intron 55.0%
AAGGTCACGGGTTCAAGTCC+TGG - chr3_3:65335215-65335234 Msa0465080:intron 55.0%
GGCTTAGGCCTTACAAAGCC+CGG + chr3_3:65335308-65335327 None:intergenic 55.0%
GCCTATTAAGCCCATCAGGC+CGG + chr3_3:65335686-65335705 None:intergenic 55.0%
TAAACGAGCTAGGCCGAGCT+AGG - chr3_3:65335778-65335797 Msa0465080:intron 55.0%
ATGCGGGAGCTCTATTGCAC+CGG - chr3_3:65335935-65335954 Msa0465080:CDS 55.0%
ATGCGGGAGCTCTATTGCAC+TGG - chr3_3:65335935-65335954 Msa0465080:CDS 55.0%
TGCGGGAGCTCTATTGCACT+GGG - chr3_3:65336027-65336046 Msa0465080:CDS 55.0%
!! TGCAAGAAGGGGATTGGTCC+TGG - chr3_3:65337298-65337317 Msa0465080:intron 55.0%
TGGACCCCTGAGGTTCCTTA+TGG - chr3_3:65337462-65337481 Msa0465080:CDS 55.0%
GGACCCCTGAGGTTCCTTAT+GGG - chr3_3:65337463-65337482 Msa0465080:CDS 55.0%
! AAGCCAGTGGAATTGGTGGC+AGG - chr3_3:65337749-65337768 Msa0465080:CDS 55.0%
TTGCCTGCCACCAATTCCAC+TGG + chr3_3:65337755-65337774 None:intergenic 55.0%
GGTGTGGTCCAAGTCAACCT+CGG - chr3_3:65337847-65337866 Msa0465080:CDS 55.0%
GTGTGGTCCAAGTCAACCTC+GGG - chr3_3:65337848-65337867 Msa0465080:CDS 55.0%
TGTGGTCCAAGTCAACCTCG+GGG - chr3_3:65337849-65337868 Msa0465080:CDS 55.0%
CTCGGGGGTTGGAGTTTAGA+GGG - chr3_3:65337865-65337884 Msa0465080:CDS 55.0%
CGGACAGCAGACATAGAGAC+CGG + chr3_3:65338136-65338155 None:intergenic 55.0%
GACATGTGGGTCGTGCTTGA+AGG - chr3_3:65338658-65338677 Msa0465080:intron 55.0%
!! GAGGACGAGGTATCGATGCA+AGG - chr3_3:65339330-65339349 Msa0465080:intron 55.0%
!! CGAGGTATCGATGCAAGGCA+CGG - chr3_3:65339335-65339354 Msa0465080:intron 55.0%
TCTACGTCTCCAACTGCAGC+TGG + chr3_3:65340218-65340237 None:intergenic 55.0%
!! GGGTGGAAATGGGCTAGGCT+GGG - chr3_3:65335282-65335301 Msa0465080:intron 60.0%
!! CCTATGACGGGTAACAGGCC+AGG + chr3_3:65335360-65335379 None:intergenic 60.0%
CCTGGCCTGTTACCCGTCAT+AGG - chr3_3:65335357-65335376 Msa0465080:intron 60.0%
!! CTCATTTTCGAGGCCTGGCC+TGG - chr3_3:65335380-65335399 Msa0465080:intron 60.0%
!! GCCGGCCTGATGGGCTTAAT+AGG - chr3_3:65335682-65335701 Msa0465080:intron 60.0%
GCTAGGCTGTAGGCCTCTGT+CGG - chr3_3:65335811-65335830 Msa0465080:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG - chr3_3:65335903-65335922 Msa0465080:intron 60.0%
CATATGCAGGGTCCGGGAAG+GGG + chr3_3:65335918-65335937 None:intergenic 60.0%
GCATATGCAGGGTCCGGGAA+GGG + chr3_3:65335919-65335938 None:intergenic 60.0%
CTTCCCGGACCCTGCATATG+CGG - chr3_3:65335918-65335937 Msa0465080:CDS 60.0%
TTCCCGGACCCTGCATATGC+GGG - chr3_3:65335919-65335938 Msa0465080:CDS 60.0%
TGCGGGAGCTCTATTGCACC+GGG - chr3_3:65335936-65335955 Msa0465080:CDS 60.0%
! TGCACCGGGTTGCCCTTTTG+TGG - chr3_3:65335981-65336000 Msa0465080:CDS 60.0%
! GCACCGGGTTGCCCTTTTGT+GGG - chr3_3:65335982-65336001 Msa0465080:CDS 60.0%
GGTCCCACAAAAGGGCAACC+CGG + chr3_3:65335988-65336007 None:intergenic 60.0%
CGGGAAGGGGTCCCACAAAA+GGG + chr3_3:65335996-65336015 None:intergenic 60.0%
! CCTTTTGTGGGACCCCTTCC+CGG - chr3_3:65335994-65336013 Msa0465080:CDS 60.0%
CATATGCAGGGTCCGGGAAG+GGG + chr3_3:65335918-65335937 None:intergenic 60.0%
GCATATGCAGGGTCCGGGAA+GGG + chr3_3:65335919-65335938 None:intergenic 60.0%
CTTCCCGGACCCTGCATATG+CGG - chr3_3:65335918-65335937 Msa0465080:CDS 60.0%
TTCCCGGACCCTGCATATGC+GGG - chr3_3:65335919-65335938 Msa0465080:CDS 60.0%
GTGGTCCAAGTCAACCTCGG+GGG - chr3_3:65337850-65337869 Msa0465080:CDS 60.0%
TCCAAGTCAACCTCGGGGGT+TGG - chr3_3:65337854-65337873 Msa0465080:CDS 60.0%
TCCAACCCCCGAGGTTGACT+TGG + chr3_3:65337858-65337877 None:intergenic 60.0%
CCTCTAAACTCCAACCCCCG+AGG + chr3_3:65337867-65337886 None:intergenic 60.0%
CCTCGGGGGTTGGAGTTTAG+AGG - chr3_3:65337864-65337883 Msa0465080:CDS 60.0%
GGGGGCTGACCTAGTCTCAT+TGG - chr3_3:65338293-65338312 Msa0465080:CDS 60.0%
AGCCACTCTCCAGCTGCAGT+TGG - chr3_3:65340206-65340225 Msa0465080:intron 60.0%
CTCCAACTGCAGCTGGAGAG+TGG + chr3_3:65340211-65340230 None:intergenic 60.0%
!! GGGGTGGAAATGGGCTAGGC+TGG - chr3_3:65335281-65335300 Msa0465080:intron 65.0%
!! GGAAATGGGCTAGGCTGGGC+CGG - chr3_3:65335286-65335305 Msa0465080:intron 65.0%
!! GAAATGGGCTAGGCTGGGCC+GGG - chr3_3:65335287-65335306 Msa0465080:intron 65.0%
! AGGCTGGGCCGGGCTTTGTA+AGG - chr3_3:65335297-65335316 Msa0465080:intron 65.0%
ACGGGTAACAGGCCAGGCTC+AGG + chr3_3:65335354-65335373 None:intergenic 65.0%
GGCTGTAGGCCTCTGTCGGA+CGG - chr3_3:65335815-65335834 Msa0465080:intron 65.0%
TAGGCCTCTGTCGGACGGTC+TGG - chr3_3:65335820-65335839 Msa0465080:intron 65.0%
TAGGCCAGACCGTCCGACAG+AGG + chr3_3:65335827-65335846 None:intergenic 65.0%
CGGGAAGGGGTCCCACCATT+TGG + chr3_3:65335905-65335924 None:intergenic 65.0%
CGCATATGCAGGGTCCGGGA+AGG + chr3_3:65335920-65335939 None:intergenic 65.0%
CTCCCGCATATGCAGGGTCC+GGG + chr3_3:65335924-65335943 None:intergenic 65.0%
GCTCCCGCATATGCAGGGTC+CGG + chr3_3:65335925-65335944 None:intergenic 65.0%
GCGGGAGCTCTATTGCACCG+GGG - chr3_3:65335937-65335956 Msa0465080:CDS 65.0%
CCGGGAAGGGGTCCCACAAA+AGG + chr3_3:65335997-65336016 None:intergenic 65.0%
CGCATATGCAGGGTCCGGGA+AGG + chr3_3:65335920-65335939 None:intergenic 65.0%
CTCCCGCATATGCAGGGTCC+GGG + chr3_3:65335924-65335943 None:intergenic 65.0%
GCTCCCGCATATGCAGGGTC+CGG + chr3_3:65335925-65335944 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 65334341 65340979 65334341 ID=Msa0465080;Name=Msa0465080
chr3_3 mRNA 65334341 65340979 65334341 ID=Msa0465080-mRNA-1;Parent=Msa0465080;Name=Msa0465080-mRNA-1;_AED=0.09;_eAED=0.10;_QI=0|0.12|0|1|1|1|9|0|901
chr3_3 exon 65340625 65340979 65340625 ID=Msa0465080-mRNA-1:exon:14541;Parent=Msa0465080-mRNA-1
chr3_3 exon 65337396 65338520 65337396 ID=Msa0465080-mRNA-1:exon:14540;Parent=Msa0465080-mRNA-1
chr3_3 exon 65336906 65337088 65336906 ID=Msa0465080-mRNA-1:exon:14539;Parent=Msa0465080-mRNA-1
chr3_3 exon 65336737 65336804 65336737 ID=Msa0465080-mRNA-1:exon:14538;Parent=Msa0465080-mRNA-1
chr3_3 exon 65336265 65336381 65336265 ID=Msa0465080-mRNA-1:exon:14537;Parent=Msa0465080-mRNA-1
chr3_3 exon 65335918 65336150 65335918 ID=Msa0465080-mRNA-1:exon:14536;Parent=Msa0465080-mRNA-1
chr3_3 exon 65335488 65335635 65335488 ID=Msa0465080-mRNA-1:exon:14535;Parent=Msa0465080-mRNA-1
chr3_3 exon 65334640 65334906 65334640 ID=Msa0465080-mRNA-1:exon:14534;Parent=Msa0465080-mRNA-1
chr3_3 exon 65334341 65334550 65334341 ID=Msa0465080-mRNA-1:exon:14533;Parent=Msa0465080-mRNA-1
chr3_3 CDS 65340625 65340979 65340625 ID=Msa0465080-mRNA-1:cds;Parent=Msa0465080-mRNA-1
chr3_3 CDS 65337396 65338520 65337396 ID=Msa0465080-mRNA-1:cds;Parent=Msa0465080-mRNA-1
chr3_3 CDS 65336906 65337088 65336906 ID=Msa0465080-mRNA-1:cds;Parent=Msa0465080-mRNA-1
chr3_3 CDS 65336737 65336804 65336737 ID=Msa0465080-mRNA-1:cds;Parent=Msa0465080-mRNA-1
chr3_3 CDS 65336265 65336381 65336265 ID=Msa0465080-mRNA-1:cds;Parent=Msa0465080-mRNA-1
chr3_3 CDS 65335918 65336150 65335918 ID=Msa0465080-mRNA-1:cds;Parent=Msa0465080-mRNA-1
chr3_3 CDS 65335488 65335635 65335488 ID=Msa0465080-mRNA-1:cds;Parent=Msa0465080-mRNA-1
chr3_3 CDS 65334640 65334906 65334640 ID=Msa0465080-mRNA-1:cds;Parent=Msa0465080-mRNA-1
chr3_3 CDS 65334341 65334550 65334341 ID=Msa0465080-mRNA-1:cds;Parent=Msa0465080-mRNA-1
Gene Sequence

>Msa0465080

ATGTTGAACAAGTTATATGTATGTGTATTAGAAGCCAAAGACTTACCTGTGAAAAATTCTCGTGTGAAGCTTAAACTTGGAAAGTTTAAATACAAGACAAGGATATTGAGAAACACGTTCAATCCCATTTTGAACGAGGAGTTTGTTTTTAAGGTGAAGGATATTGCTGAGGATGTGCTTGTTGTCAATGTTGTTAATCATCATAGTGATGAATCAAAGGTAGTGGATTTTGTTGGTGAGGTACGGATTCCTGTTGGTGAGGTTGGTTTTGAGGATAATAAGCAAATATTGCCACCTACTTGGTTCGAGCTTCAATGTTCTAACAAGAATGGCAAATTTTTCAACAAATTTTGTGGGAAGATTCTCCTTACAATTTCTCTTCATTATAAGGACCATGTTTCTTTTATGAATCATAAGCATTCTCCAAACTCAACTGCTTCAATTAAGGACTCAACAGAATCCGAACGTCCTCACATTTCATCTCATCAATTTTTTGATAAAAATCGGAAAATGGGTGAAGGCAAACAGTTGTTGAAGGTTATCGCTAATCGCATAGAAAGGATTTTACATAAGAAAGAACGAAACTCAAAATCCGTGGATTGTTCAGAAACATCAAATTCATTGTCTGATTATGAAGATAGTGTCCAAGAAAATTCACCCCCTTGTAGTTTTGAAGAAGGCATTGCACTAATGGAGTCAAGAGATAACCGACCAGAAAGTCCTGAAAATTTGCAGGGCGGTATTTTAGTAGATAAGATTTATGAAGTATCTTCACACAATCTTAATGTTGTTCTTTTCGCGCCCAATTCTCAGTTTAGGAAAGATTTAGCAGAACTACAAGGGACAACAAATTTGCAAGAAGGGGATTGGTCCTGGAAAGATGAAGATATGTCTTGTTTGACTCGAGTCGTCAACTATACAAAAGCTGCTTCAAAATTAGTTAAGGCTCTCAATACCACTGAAGAACAAACCTATATTAGAGTGACTAAAGATGAATTTGATGTACTTGTTAGTGTATGGACCCCTGAGGTTCCTTATGGGAATTCATTTCGGGTCGAAATTCTTTACAAGATAATGCCTGGAGAAGATTTGTCTTGTGTAGAGGAATCCTCACATCTTGTGATATCATGGGGAATGGTTTTCCTACAAAGCACAATGATGAAAGGTGTGATAGAAAATGGGGCTAAACAAGGTTTGAAGGAGAGTTTTGACCAGTTTGCTAACCTACTTGCTCAGAGGTTTAAGGTGCTAGATAAGGAGGATTTGATAAACAAAGAACATTTGCTGGCAACTTTGCAGACAGAAAGCCAGTGGAATTGGTGGCAGGCAATTACATACTTCTGGAATTTCACAGTTGTTTCCACATTTTTTATGTGTTTATATGTGTTGCTGCATATTTTAAGGTGTGGTCCAAGTCAACCTCGGGGGTTGGAGTTTAGAGGGATTGAACTGCCAGATAGCTTAGGAGAACTAGTAACAAGAACTGACCATGGCATGAAAGCACATGGTGATGGATGGGTTGTTACTGTAGCTTTAATTGAGGGGGCTGACCTAGTCTCATTGGAGTCAACAGGGTTGTCAGATCCTTATGTGGTTTTCACCTGTAATGGACAAACAAGATCAAGCTCTGTGAAGCTTGAGACATCAGATCCTCAATGGAATGAGATATTAGAGTTTGATGCTATGGAAGAACCACCATCAGTTTTGTATGTGGAAGTTTTGATTTTGATGTTCAATCTTCCATCACCTCAAAGGAATTCTACATTCCAGAAATTGTTTGGGTTGCCTCCAGAAGAATTTCTAATCAATGATTTCACATGTTCCCTGAAGAGAAAATTGCATTTACAGGGTCGGCTATTTCTTTCTGCAAGGGTTCTGGGATTTTATGCAAATTTGTTTGGACATAAAACAAAATTTTTCTTCCTTTGGGAAGATATTGATAACATTCTAGTGCTTCCTCCATCATTAGCATCATTAGGAAGCCCTACATTGGCCATAATTCTTCGAAGAGGACGAGGTATCGATGCAAGGCACGGTGCCAAGACGCAAGATGAAGAAGGAAGGCTTAGGTTTCATTTTCAAGCAAGAATGCTGAACCCCTATCAGAAAGAACAAATTACAGAAGAGCATGAAGATCAAGAGGTCTTGGTAATGCCTGAAGACTCTGGATCTATCCTAGAAGATGAGGCAAAAATGTCCAGGATTTACTCTGCTGAACTACCAATTAAGGTAAGTTCAGTGATGGAAATTTTTGATGGGGGAAACATAGAGCATAAGATTATGAAAAGAACTGGTTGTATGGACTATGACACTACACCTTGGGAACCAGTAAAACCTGATGTACTCGAAAGGCATGTTACGTACCAATTTAACAGGCATGTGTCAGTTTTTGATGTTACAAGCACACAACAAAAATATCCAAACACAAACACTGAAGGAAGGATTGTGAATGAAGTTATGATCCTCAATGGCGTTCCATTTTCTGATCACTTCCGTATTCATTTTAGGTACGAAATTGAGAAATCAGCTCTTGGTGAATGTGCTTGCAAGTGTGATGTATACATTGGCATTATGTGGCTTAGGAGCTCTAAGTTTCAGCAAAGGATCAACAGGAACATAACATCCAAGTTTAAAGTTCGACTGGAGGAAATATTTGAACTACTGCAGAAAGAGATTTTATTGATGTCTCAGAAATCGCATGTGTAA

Protein sequence

>Msa0465080

MLNKLYVCVLEAKDLPVKNSRVKLKLGKFKYKTRILRNTFNPILNEEFVFKVKDIAEDVLVVNVVNHHSDESKVVDFVGEVRIPVGEVGFEDNKQILPPTWFELQCSNKNGKFFNKFCGKILLTISLHYKDHVSFMNHKHSPNSTASIKDSTESERPHISSHQFFDKNRKMGEGKQLLKVIANRIERILHKKERNSKSVDCSETSNSLSDYEDSVQENSPPCSFEEGIALMESRDNRPESPENLQGGILVDKIYEVSSHNLNVVLFAPNSQFRKDLAELQGTTNLQEGDWSWKDEDMSCLTRVVNYTKAASKLVKALNTTEEQTYIRVTKDEFDVLVSVWTPEVPYGNSFRVEILYKIMPGEDLSCVEESSHLVISWGMVFLQSTMMKGVIENGAKQGLKESFDQFANLLAQRFKVLDKEDLINKEHLLATLQTESQWNWWQAITYFWNFTVVSTFFMCLYVLLHILRCGPSQPRGLEFRGIELPDSLGELVTRTDHGMKAHGDGWVVTVALIEGADLVSLESTGLSDPYVVFTCNGQTRSSSVKLETSDPQWNEILEFDAMEEPPSVLYVEVLILMFNLPSPQRNSTFQKLFGLPPEEFLINDFTCSLKRKLHLQGRLFLSARVLGFYANLFGHKTKFFFLWEDIDNILVLPPSLASLGSPTLAIILRRGRGIDARHGAKTQDEEGRLRFHFQARMLNPYQKEQITEEHEDQEVLVMPEDSGSILEDEAKMSRIYSAELPIKVSSVMEIFDGGNIEHKIMKRTGCMDYDTTPWEPVKPDVLERHVTYQFNRHVSVFDVTSTQQKYPNTNTEGRIVNEVMILNGVPFSDHFRIHFRYEIEKSALGECACKCDVYIGIMWLRSSKFQQRINRNITSKFKVRLEEIFELLQKEILLMSQKSHV*