Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0465080 | XP_003601189.1 | 90.985 | 599 | 28 | 2 | 1 | 574 | 1 | 598 | 0.0 | 1110 |
Msa0465080 | XP_003601189.1 | 91.496 | 341 | 12 | 1 | 578 | 901 | 674 | 1014 | 0.0 | 649 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0465080 | sp|Q9FGS8|C2GR2_ARATH | 47.377 | 610 | 278 | 12 | 4 | 574 | 2 | 607 | 1.37e-171 | 528 |
Msa0465080 | sp|Q9FGS8|C2GR2_ARATH | 51.343 | 335 | 142 | 4 | 578 | 891 | 683 | 1017 | 2.69e-108 | 361 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0465080 | G7J4S2 | 90.985 | 599 | 28 | 2 | 1 | 574 | 1 | 598 | 0.0 | 1110 |
Msa0465080 | G7J4S2 | 91.496 | 341 | 12 | 1 | 578 | 901 | 674 | 1014 | 0.0 | 649 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0465080 | Msa0510780 | 0.862718 | 4.154357e-64 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0465080 | MtrunA17_Chr3g0117001 | 90.985 | 599 | 28 | 2 | 1 | 574 | 1 | 598 | 0.0 | 1110 |
Msa0465080 | MtrunA17_Chr3g0117001 | 91.496 | 341 | 12 | 1 | 578 | 901 | 674 | 1014 | 0.0 | 649 |
Msa0465080 | MtrunA17_Chr2g0290721 | 43.226 | 620 | 291 | 13 | 4 | 573 | 2 | 610 | 3.24e-143 | 451 |
Msa0465080 | MtrunA17_Chr2g0290721 | 50.299 | 334 | 147 | 2 | 579 | 893 | 688 | 1021 | 3.46e-106 | 352 |
Msa0465080 | MtrunA17_Chr4g0076511 | 42.165 | 619 | 299 | 14 | 4 | 573 | 2 | 610 | 2.07e-133 | 425 |
Msa0465080 | MtrunA17_Chr4g0076511 | 49.254 | 335 | 148 | 5 | 579 | 893 | 688 | 1020 | 8.10e-97 | 327 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0465080 | AT5G50170.1 | 47.377 | 610 | 278 | 12 | 4 | 574 | 2 | 607 | 1.39e-172 | 528 |
Msa0465080 | AT5G50170.1 | 51.343 | 335 | 142 | 4 | 578 | 891 | 683 | 1017 | 2.74e-109 | 361 |
Msa0465080 | AT1G03370.2 | 43.252 | 615 | 292 | 13 | 4 | 574 | 2 | 603 | 2.70e-149 | 461 |
Msa0465080 | AT1G03370.2 | 73.504 | 117 | 31 | 0 | 579 | 695 | 680 | 796 | 5.72e-50 | 190 |
Msa0465080 | AT1G03370.1 | 43.252 | 615 | 292 | 13 | 4 | 574 | 2 | 603 | 1.21e-146 | 460 |
Msa0465080 | AT1G03370.1 | 49.563 | 343 | 150 | 5 | 579 | 901 | 680 | 1019 | 4.63e-97 | 327 |
Find 179 sgRNAs with CRISPR-Local
Find 494 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTACTTGCTCAGAGGTTTA+AGG | 0.117652 | 3_3:-65337630 | Msa0465080:CDS |
ATTTCTTTCTGCAAGGGTTC+TGG | 0.157779 | 3_3:-65336120 | Msa0465080:CDS |
TGATTGATGGTTACCTTAAT+TGG | 0.185328 | 3_3:+65335474 | None:intergenic |
CTGACACATGCCTGTTAAAT+TGG | 0.188888 | 3_3:+65334750 | None:intergenic |
TACAATTTCTCTTCATTATA+AGG | 0.192020 | 3_3:-65338485 | Msa0465080:CDS |
GAGGCAACCCAAACAATTTC+TGG | 0.206916 | 3_3:+65336324 | None:intergenic |
AACAAACTCCTCGTTCAAAA+TGG | 0.230373 | 3_3:+65340833 | None:intergenic |
CTTTCATCATTGTGCTTTGT+AGG | 0.238651 | 3_3:+65337711 | None:intergenic |
TCCTTATGGGAATTCATTTC+GGG | 0.255715 | 3_3:-65337822 | Msa0465080:CDS |
TGATCTTGTTTGTCCATTAC+AGG | 0.255725 | 3_3:+65336946 | None:intergenic |
AAACTCAACTGCTTCAATTA+AGG | 0.266631 | 3_3:-65338428 | Msa0465080:CDS |
TTCCTTATGGGAATTCATTT+CGG | 0.268510 | 3_3:-65337823 | Msa0465080:CDS |
TGTAATTTGTTCTTTCTGAT+AGG | 0.271011 | 3_3:+65335596 | None:intergenic |
CTCTGCTGAACTACCAATTA+AGG | 0.276365 | 3_3:-65335487 | Msa0465080:intron |
TCTACATTCCAGAAATTGTT+TGG | 0.291905 | 3_3:-65336332 | Msa0465080:CDS |
CTTCCTTCAGTGTTTGTGTT+TGG | 0.296689 | 3_3:+65334695 | None:intergenic |
ATCTTTCCTAAACTGAGAAT+TGG | 0.299105 | 3_3:+65338051 | None:intergenic |
GAAGAGAAAATTGCATTTAC+AGG | 0.299291 | 3_3:-65336264 | Msa0465080:intron |
ATGAAAGGTGTGATAGAAAA+TGG | 0.304619 | 3_3:-65337695 | Msa0465080:CDS |
TGGACCCCTGAGGTTCCTTA+TGG | 0.312969 | 3_3:-65337836 | Msa0465080:CDS |
TTTCTTTCTGCAAGGGTTCT+GGG | 0.313222 | 3_3:-65336119 | Msa0465080:CDS |
GGCAGGCAATTACATACTTC+TGG | 0.318091 | 3_3:-65337532 | Msa0465080:CDS |
TCGTCCTCTTCGAAGAATTA+TGG | 0.326116 | 3_3:+65335983 | None:intergenic |
GATAAACAAAGAACATTTGC+TGG | 0.331980 | 3_3:-65337588 | Msa0465080:CDS |
TTAATTGAAGCAGTTGAGTT+TGG | 0.338297 | 3_3:+65338430 | None:intergenic |
GTAATTTGTTCTTTCTGATA+GGG | 0.342312 | 3_3:+65335597 | None:intergenic |
TCGCGCCCAATTCTCAGTTT+AGG | 0.348773 | 3_3:-65338057 | Msa0465080:CDS |
TCATTGATTAGAAATTCTTC+TGG | 0.353289 | 3_3:+65336302 | None:intergenic |
AGACATATCTTCATCTTTCC+AGG | 0.360057 | 3_3:+65337982 | None:intergenic |
CTCCAGTCGAACTTTAAACT+TGG | 0.365288 | 3_3:+65334401 | None:intergenic |
ACTAGTTCTCCTAAGCTATC+TGG | 0.370900 | 3_3:+65337401 | None:intergenic |
ATCTTTAGTCACTCTAATAT+AGG | 0.372207 | 3_3:+65337883 | None:intergenic |
ATGTTACGTACCAATTTAAC+AGG | 0.378460 | 3_3:-65334760 | Msa0465080:CDS |
CCTCCATCATTAGCATCATT+AGG | 0.379450 | 3_3:-65336020 | Msa0465080:CDS |
CTAGTCTCATTGGAGTCAAC+AGG | 0.382626 | 3_3:-65336995 | Msa0465080:CDS |
CGGATTCCTGTTGGTGAGGT+TGG | 0.389430 | 3_3:-65340714 | Msa0465080:CDS |
TGAAGAAGGCATTGCACTAA+TGG | 0.390731 | 3_3:-65338182 | Msa0465080:CDS |
ACACGGAAGTGATCAGAAAA+TGG | 0.390903 | 3_3:+65334638 | None:intergenic |
TATGAAAAGAACTGGTTGTA+TGG | 0.391972 | 3_3:-65334834 | Msa0465080:CDS |
TCCTTCTTCATCTTGCGTCT+TGG | 0.391985 | 3_3:+65335938 | None:intergenic |
CCTCACATCTTGTGATATCA+TGG | 0.394079 | 3_3:-65337745 | Msa0465080:CDS |
AGCAAATATTGCCACCTACT+TGG | 0.399405 | 3_3:-65340677 | Msa0465080:CDS |
AGACAGAAAGCCAGTGGAAT+TGG | 0.405883 | 3_3:-65337556 | Msa0465080:CDS |
AGGATAGATCCAGAGTCTTC+AGG | 0.408636 | 3_3:+65335540 | None:intergenic |
CTACATTCCAGAAATTGTTT+GGG | 0.410876 | 3_3:-65336331 | Msa0465080:CDS |
GATATTAGAGTTTGATGCTA+TGG | 0.411267 | 3_3:-65336781 | Msa0465080:CDS |
TGCAAGAAGGGGATTGGTCC+TGG | 0.412225 | 3_3:-65338000 | Msa0465080:CDS |
AGAAAGTCCTGAAAATTTGC+AGG | 0.414312 | 3_3:-65338140 | Msa0465080:CDS |
TTGATGTACTTGTTAGTGTA+TGG | 0.415153 | 3_3:-65337856 | Msa0465080:CDS |
GTTACTGTAGCTTTAATTGA+GGG | 0.416589 | 3_3:-65337025 | Msa0465080:CDS |
AGCTGCTTCAAAATTAGTTA+AGG | 0.421735 | 3_3:-65337930 | Msa0465080:CDS |
AGATGAAATGTGAGGACGTT+CGG | 0.425919 | 3_3:+65338393 | None:intergenic |
GGACCCCTGAGGTTCCTTAT+GGG | 0.435476 | 3_3:-65337835 | Msa0465080:CDS |
TCTTTCCTAAACTGAGAATT+GGG | 0.440200 | 3_3:+65338052 | None:intergenic |
GCATGAAGATCAAGAGGTCT+TGG | 0.441294 | 3_3:-65335568 | Msa0465080:CDS |
CATAAGATTATGAAAAGAAC+TGG | 0.445701 | 3_3:-65334842 | Msa0465080:CDS |
ACATGCCTTTCGAGTACATC+AGG | 0.447487 | 3_3:+65334779 | None:intergenic |
TGTTACTGTAGCTTTAATTG+AGG | 0.451394 | 3_3:-65337026 | Msa0465080:CDS |
AGTTTCAGCAAAGGATCAAC+AGG | 0.452752 | 3_3:-65334434 | Msa0465080:CDS |
TATAATGAAGAGAAATTGTA+AGG | 0.453242 | 3_3:+65338488 | None:intergenic |
ACAAACTCCTCGTTCAAAAT+GGG | 0.455588 | 3_3:+65340834 | None:intergenic |
ACATTGGCATTATGTGGCTT+AGG | 0.455616 | 3_3:-65334464 | Msa0465080:CDS |
ATTCTTTACAAGATAATGCC+TGG | 0.457645 | 3_3:-65337794 | Msa0465080:CDS |
TCAAAACCAACCTCACCAAC+AGG | 0.461903 | 3_3:+65340708 | None:intergenic |
GAATTCCCATAAGGAACCTC+AGG | 0.462673 | 3_3:+65337830 | None:intergenic |
GTAGAATTCCTTTGAGGTGA+TGG | 0.464547 | 3_3:+65336350 | None:intergenic |
GTCGGCTATTTCTTTCTGCA+AGG | 0.469677 | 3_3:-65336127 | Msa0465080:CDS |
GAGCAAGTAGGTTAGCAAAC+TGG | 0.472357 | 3_3:+65337642 | None:intergenic |
TGAAAGGTGTGATAGAAAAT+GGG | 0.473199 | 3_3:-65337694 | Msa0465080:CDS |
GTGTGGTCCAAGTCAACCTC+GGG | 0.476221 | 3_3:-65337450 | Msa0465080:CDS |
CTTCAATGTTCTAACAAGAA+TGG | 0.478900 | 3_3:-65340648 | Msa0465080:CDS |
CGAAGAATTATGGCCAATGT+AGG | 0.482857 | 3_3:+65335993 | None:intergenic |
GTTTAAGGTGCTAGATAAGG+AGG | 0.484599 | 3_3:-65337615 | Msa0465080:CDS |
TCTCGTGTGAAGCTTAAACT+TGG | 0.484866 | 3_3:-65340900 | Msa0465080:CDS |
TGGAATGTAGAATTCCTTTG+AGG | 0.485098 | 3_3:+65336344 | None:intergenic |
CAAATTTGCAAGAAGGGGAT+TGG | 0.487087 | 3_3:-65338006 | Msa0465080:CDS |
ATCCAAGTTTAAAGTTCGAC+TGG | 0.487330 | 3_3:-65334403 | Msa0465080:CDS |
TAATTTGTTCTTTCTGATAG+GGG | 0.487805 | 3_3:+65335598 | None:intergenic |
CTTCCTAATGATGCTAATGA+TGG | 0.493959 | 3_3:+65336017 | None:intergenic |
TGGGGCTAAACAAGGTTTGA+AGG | 0.495842 | 3_3:-65337675 | Msa0465080:CDS |
TTGGTAATGCCTGAAGACTC+TGG | 0.503073 | 3_3:-65335549 | Msa0465080:CDS |
CACCATGTGCTTTCATGCCA+TGG | 0.504412 | 3_3:+65337059 | None:intergenic |
AATATAGGTTTGTTCTTCAG+TGG | 0.505534 | 3_3:+65337898 | None:intergenic |
TACTGTAGCTTTAATTGAGG+GGG | 0.506096 | 3_3:-65337023 | Msa0465080:CDS |
GGACAACAAATTTGCAAGAA+GGG | 0.506318 | 3_3:-65338012 | Msa0465080:CDS |
GGACTATGACACTACACCTT+GGG | 0.509537 | 3_3:-65334813 | Msa0465080:CDS |
CTCAGAAATCGCATGTGTAA+AGG | 0.509630 | 3_3:-65334338 | None:intergenic |
GAGGTTTAAGGTGCTAGATA+AGG | 0.516605 | 3_3:-65337618 | Msa0465080:CDS |
TCGGCTATTTCTTTCTGCAA+GGG | 0.519816 | 3_3:-65336126 | Msa0465080:CDS |
TTACAGGTGAAAACCACATA+AGG | 0.523041 | 3_3:+65336962 | None:intergenic |
TGAAGGCAAACAGTTGTTGA+AGG | 0.524534 | 3_3:-65338338 | Msa0465080:CDS |
TAGTGATGAATCAAAGGTAG+TGG | 0.525040 | 3_3:-65340754 | Msa0465080:CDS |
CAGAAAGCCAGTGGAATTGG+TGG | 0.526703 | 3_3:-65337553 | Msa0465080:CDS |
ATGTATACATTGGCATTATG+TGG | 0.530719 | 3_3:-65334470 | Msa0465080:CDS |
GAAATTGAGAAATCAGCTCT+TGG | 0.533686 | 3_3:-65334513 | Msa0465080:CDS |
TTGCCTGCCACCAATTCCAC+TGG | 0.534344 | 3_3:+65337546 | None:intergenic |
CTCACATCTTGTGATATCAT+GGG | 0.534647 | 3_3:-65337744 | Msa0465080:CDS |
ATGCCTTCTTCAAAACTACA+AGG | 0.535807 | 3_3:+65338193 | None:intergenic |
ACCCGAAATGAATTCCCATA+AGG | 0.536036 | 3_3:+65337821 | None:intergenic |
ATTGAACTGCCAGATAGCTT+AGG | 0.537298 | 3_3:-65337410 | Msa0465080:CDS |
TGATGTTTCTGAACAATCCA+CGG | 0.537679 | 3_3:+65338261 | None:intergenic |
TCTTGTGATATCATGGGGAA+TGG | 0.537854 | 3_3:-65337738 | Msa0465080:CDS |
TGCACAGGTAAGTTCAGTGA+TGG | 0.538622 | 3_3:-65334891 | Msa0465080:intron |
AAGCCAGTGGAATTGGTGGC+AGG | 0.542795 | 3_3:-65337549 | Msa0465080:CDS |
CAGAAAATGGAACGCCATTG+AGG | 0.542984 | 3_3:+65334651 | None:intergenic |
GGGACAACAAATTTGCAAGA+AGG | 0.545965 | 3_3:-65338013 | Msa0465080:CDS |
GAAGAATTATGGCCAATGTA+GGG | 0.546603 | 3_3:+65335994 | None:intergenic |
CTGTTGACTCCAATGAGACT+AGG | 0.548291 | 3_3:+65336996 | None:intergenic |
AGGGTTGTCAGATCCTTATG+TGG | 0.551722 | 3_3:-65336975 | Msa0465080:CDS |
TTATCGCTAATCGCATAGAA+AGG | 0.553560 | 3_3:-65338315 | Msa0465080:CDS |
TTGAGACATCAGATCCTCAA+TGG | 0.556417 | 3_3:-65336910 | Msa0465080:CDS |
AGAAGAGCATGAAGATCAAG+AGG | 0.557385 | 3_3:-65335574 | Msa0465080:CDS |
TGAAAGCACATGGTGATGGA+TGG | 0.558432 | 3_3:-65337051 | Msa0465080:CDS |
TTGATTAGAAATTCTTCTGG+AGG | 0.561650 | 3_3:+65336305 | None:intergenic |
TTACTGTAGCTTTAATTGAG+GGG | 0.563678 | 3_3:-65337024 | Msa0465080:CDS |
GGCATGAAAGCACATGGTGA+TGG | 0.566627 | 3_3:-65337055 | Msa0465080:CDS |
ATCATTAGGAAGCCCTACAT+TGG | 0.568432 | 3_3:-65336006 | Msa0465080:CDS |
GCCTTCTTCAAAACTACAAG+GGG | 0.570452 | 3_3:+65338195 | None:intergenic |
ACACAAGACAAATCTTCTCC+AGG | 0.571230 | 3_3:+65337776 | None:intergenic |
TCATCATAGTGATGAATCAA+AGG | 0.575054 | 3_3:-65340760 | Msa0465080:CDS |
TCAATCTTCCATCACCTCAA+AGG | 0.575235 | 3_3:-65336358 | Msa0465080:CDS |
TAGTTCAGCAGAGTAAATCC+TGG | 0.576814 | 3_3:+65335497 | None:intergenic |
ACATCAGATCCTCAATGGAA+TGG | 0.576877 | 3_3:-65336905 | Msa0465080:intron |
GACAACAAATTTGCAAGAAG+GGG | 0.580466 | 3_3:-65338011 | Msa0465080:CDS |
AAGATGAAGAAGGAAGGCTT+AGG | 0.581766 | 3_3:-65335929 | Msa0465080:CDS |
CTACAAAGCACAATGATGAA+AGG | 0.583931 | 3_3:-65337710 | Msa0465080:CDS |
ACTTCCACATACAAAACTGA+TGG | 0.585002 | 3_3:+65336750 | None:intergenic |
TGGATCTATCCTAGAAGATG+AGG | 0.587308 | 3_3:-65335529 | Msa0465080:CDS |
GCCAAGACGCAAGATGAAGA+AGG | 0.588150 | 3_3:-65335939 | Msa0465080:CDS |
AGAAGATTTGTCTTGTGTAG+AGG | 0.589987 | 3_3:-65337771 | Msa0465080:CDS |
CAAGTTTAAAGTTCGACTGG+AGG | 0.590700 | 3_3:-65334400 | Msa0465080:CDS |
TGGACTATGACACTACACCT+TGG | 0.591215 | 3_3:-65334814 | Msa0465080:CDS |
CCTAATGATGCTAATGATGG+AGG | 0.596932 | 3_3:+65336020 | None:intergenic |
AAAGATTTAGCAGAACTACA+AGG | 0.597502 | 3_3:-65338034 | Msa0465080:CDS |
ATAATTCTTCGAAGAGGACG+AGG | 0.598967 | 3_3:-65335981 | Msa0465080:CDS |
TAAGGTGAAGGATATTGCTG+AGG | 0.601117 | 3_3:-65340808 | Msa0465080:CDS |
GGAGCTCTAAGTTTCAGCAA+AGG | 0.606303 | 3_3:-65334443 | Msa0465080:CDS |
CCTTAAACCTCTGAGCAAGT+AGG | 0.607128 | 3_3:+65337630 | None:intergenic |
ATAGAAAATGGGGCTAAACA+AGG | 0.607329 | 3_3:-65337683 | Msa0465080:CDS |
GAAAGCACATGGTGATGGAT+GGG | 0.612846 | 3_3:-65337050 | Msa0465080:CDS |
CATTGAAGCTCGAACCAAGT+AGG | 0.613844 | 3_3:+65340663 | None:intergenic |
AATGAAGTTATGATCCTCAA+TGG | 0.614816 | 3_3:-65334665 | Msa0465080:CDS |
TATCCAAACACAAACACTGA+AGG | 0.619398 | 3_3:-65334698 | Msa0465080:CDS |
TGCCTTCTTCAAAACTACAA+GGG | 0.619857 | 3_3:+65338194 | None:intergenic |
AGAACGAAACTCAAAATCCG+TGG | 0.625265 | 3_3:-65338278 | Msa0465080:CDS |
TCCACATACAAAACTGATGG+TGG | 0.625286 | 3_3:+65336753 | None:intergenic |
AGACGCAAGATGAAGAAGGA+AGG | 0.627033 | 3_3:-65335935 | Msa0465080:CDS |
CGAGGTATCGATGCAAGGCA+CGG | 0.630444 | 3_3:-65335963 | Msa0465080:CDS |
TTGCTAACCTACTTGCTCAG+AGG | 0.631684 | 3_3:-65337637 | Msa0465080:CDS |
GAAAGTCCTGAAAATTTGCA+GGG | 0.631919 | 3_3:-65338139 | Msa0465080:CDS |
AATTCCCATAAGGAACCTCA+GGG | 0.632610 | 3_3:+65337831 | None:intergenic |
CAAACACAAACACTGAAGGA+AGG | 0.633299 | 3_3:-65334694 | Msa0465080:CDS |
GGTGTGGTCCAAGTCAACCT+CGG | 0.633718 | 3_3:-65337451 | Msa0465080:CDS |
GAAAGTTTAAATACAAGACA+AGG | 0.635240 | 3_3:-65340878 | Msa0465080:CDS |
GAGGACGAGGTATCGATGCA+AGG | 0.637951 | 3_3:-65335968 | Msa0465080:CDS |
TAAAACCTGATGTACTCGAA+AGG | 0.640491 | 3_3:-65334784 | Msa0465080:CDS |
TGTTATCAATATCTTCCCAA+AGG | 0.641831 | 3_3:+65336054 | None:intergenic |
GGTGAGGTACGGATTCCTGT+TGG | 0.642859 | 3_3:-65340723 | Msa0465080:CDS |
CCATGATATCACAAGATGTG+AGG | 0.647215 | 3_3:+65337745 | None:intergenic |
CTTCTAATAGGAACTGACCA+TGG | 0.647931 | 3_3:-65337076 | Msa0465080:intron |
AAGATTTAGCAGAACTACAA+GGG | 0.650173 | 3_3:-65338033 | Msa0465080:CDS |
GAAAGGTGTGATAGAAAATG+GGG | 0.653678 | 3_3:-65337693 | Msa0465080:CDS |
TCACATCTTGTGATATCATG+GGG | 0.656320 | 3_3:-65337743 | Msa0465080:CDS |
AAGGACAAACCATTCCATTG+AGG | 0.656530 | 3_3:+65336896 | None:intergenic |
CTTTGCAGACAGAAAGCCAG+TGG | 0.659478 | 3_3:-65337562 | Msa0465080:CDS |
TTGGCCATAATTCTTCGAAG+AGG | 0.663350 | 3_3:-65335987 | Msa0465080:CDS |
TAGTCTCATTGGAGTCAACA+GGG | 0.666827 | 3_3:-65336994 | Msa0465080:CDS |
GGTACGGATTCCTGTTGGTG+AGG | 0.669898 | 3_3:-65340718 | Msa0465080:CDS |
TATGATTCATAAAAGAAACA+TGG | 0.676075 | 3_3:+65338461 | None:intergenic |
TGAAGCTCGAACCAAGTAGG+TGG | 0.684082 | 3_3:+65340666 | None:intergenic |
TGCAAGTGTGATGTATACAT+TGG | 0.693705 | 3_3:-65334480 | Msa0465080:CDS |
GACCATGGCATGAAAGCACA+TGG | 0.699877 | 3_3:-65337061 | Msa0465080:CDS |
GTGGTCCAAGTCAACCTCGG+GGG | 0.700429 | 3_3:-65337448 | Msa0465080:CDS |
TGTTAGTGTATGGACCCCTG+AGG | 0.705739 | 3_3:-65337846 | Msa0465080:CDS |
AATTGATGAGATGAAATGTG+AGG | 0.715068 | 3_3:+65338385 | None:intergenic |
TGTGGTCCAAGTCAACCTCG+GGG | 0.726685 | 3_3:-65337449 | Msa0465080:CDS |
AGTCCTGAAAATTTGCAGGG+CGG | 0.751620 | 3_3:-65338136 | Msa0465080:CDS |
CCTTCTTCAAAACTACAAGG+GGG | 0.754878 | 3_3:+65338196 | None:intergenic |
ATTCCCATAAGGAACCTCAG+GGG | 0.815311 | 3_3:+65337832 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TGATATTATGTTTTTTTTAA+TGG | - | chr3_3:65334754-65334773 | Msa0465080:CDS | 10.0% |
!! | TTATATATGAAAAACTTAAT+AGG | - | chr3_3:65335660-65335679 | Msa0465080:intron | 10.0% |
!!! | ATTTTATTTTTTTTCTTTGT+TGG | - | chr3_3:65336450-65336469 | Msa0465080:intron | 10.0% |
!!! | ATCAATTTTTTGATAAAAAT+CGG | - | chr3_3:65336929-65336948 | Msa0465080:CDS | 10.0% |
!!! | AAATTTTTCAACAAATTTTG+TGG | - | chr3_3:65334674-65334693 | Msa0465080:CDS | 15.0% |
!! | CAATTAACATACTAATATTT+AGG | + | chr3_3:65334783-65334802 | None:intergenic | 15.0% |
!! | ATATTAGTATGTTAATTGTT+AGG | - | chr3_3:65334785-65334804 | Msa0465080:CDS | 15.0% |
!! | TATTAGTATGTTAATTGTTA+GGG | - | chr3_3:65334786-65334805 | Msa0465080:CDS | 15.0% |
!! | CAAAAAATATTTACTATTTG+TGG | + | chr3_3:65334859-65334878 | None:intergenic | 15.0% |
!!! | ATTTATCACAATTTTGAAAA+TGG | + | chr3_3:65334890-65334909 | None:intergenic | 15.0% |
!! | TAAGGAATTAAATAAGTTAA+AGG | + | chr3_3:65335045-65335064 | None:intergenic | 15.0% |
!! | TAAATAATGAATTCATATGA+AGG | - | chr3_3:65335539-65335558 | Msa0465080:CDS | 15.0% |
!! | AACTTCAAAAATATCAATAA+TGG | - | chr3_3:65335629-65335648 | Msa0465080:intron | 15.0% |
!! | CATTCTACAATTATAAAAAA+GGG | + | chr3_3:65336086-65336105 | None:intergenic | 15.0% |
!! | CATTCTACAATTATAAAAAA+GGG | + | chr3_3:65336086-65336105 | None:intergenic | 15.0% |
!! | TTCAAGAAATAAAAAAAGTA+TGG | + | chr3_3:65336719-65336738 | None:intergenic | 15.0% |
!! | ATATAAACACATAAAAAATG+TGG | + | chr3_3:65337808-65337827 | None:intergenic | 15.0% |
!!! | TTTTGACTTGATATTTAAAT+TGG | + | chr3_3:65339923-65339942 | None:intergenic | 15.0% |
!!! | GTTAATGTTTGTATTTTCTT+CGG | - | chr3_3:65334990-65335009 | Msa0465080:intron | 20.0% |
!!! | TTAATGTTTGTATTTTCTTC+GGG | - | chr3_3:65334991-65335010 | Msa0465080:intron | 20.0% |
!!! | CATAAAATAGGCTTTTAAAT+AGG | + | chr3_3:65335436-65335455 | None:intergenic | 20.0% |
!! | TTATTTAGATGCTGATATAT+TGG | + | chr3_3:65335575-65335594 | None:intergenic | 20.0% |
!! | GCATTCTACAATTATAAAAA+AGG | + | chr3_3:65336087-65336106 | None:intergenic | 20.0% |
!! | GCATTCTACAATTATAAAAA+AGG | + | chr3_3:65336087-65336106 | None:intergenic | 20.0% |
!! | AAATATATGCTATAGAAACT+AGG | + | chr3_3:65336229-65336248 | None:intergenic | 20.0% |
!!! | TTTGTTATGTTTATTACCTT+AGG | - | chr3_3:65336380-65336399 | Msa0465080:intron | 20.0% |
!! | AAATAAAATGACAGAAAGAA+TGG | + | chr3_3:65336439-65336458 | None:intergenic | 20.0% |
!! | TTTATCTTAAATGTAAACTC+AGG | + | chr3_3:65336571-65336590 | None:intergenic | 20.0% |
!! | TTGAGATAAAAAAATCAGTT+TGG | + | chr3_3:65336757-65336776 | None:intergenic | 20.0% |
!!! | AACTGATTTTTTTATCTCAA+TGG | - | chr3_3:65336757-65336776 | Msa0465080:CDS | 20.0% |
!! | TATAATGAAGAGAAATTGTA+AGG | + | chr3_3:65336813-65336832 | None:intergenic | 20.0% |
!! | TACAATTTCTCTTCATTATA+AGG | - | chr3_3:65336813-65336832 | Msa0465080:intron | 20.0% |
!! | TATGATTCATAAAAGAAACA+TGG | + | chr3_3:65336840-65336859 | None:intergenic | 20.0% |
!!! | TTTTGATAAAAATCGGAAAA+TGG | - | chr3_3:65336936-65336955 | Msa0465080:CDS | 20.0% |
!! | TTTGATAAAAATCGGAAAAT+GGG | - | chr3_3:65336937-65336956 | Msa0465080:CDS | 20.0% |
!! | ATAACAAGTACAATAATAGT+AGG | + | chr3_3:65338021-65338040 | None:intergenic | 20.0% |
!!! | CAAATTTTTTAGCAAATAAG+TGG | + | chr3_3:65338436-65338455 | None:intergenic | 20.0% |
!! | TCTTTACTTATATTCTGTAT+TGG | - | chr3_3:65338472-65338491 | Msa0465080:CDS | 20.0% |
!!! | ATTATTGTTTTTGACTATTG+AGG | - | chr3_3:65338904-65338923 | Msa0465080:intron | 20.0% |
!!! | TTATTGTTTTTGACTATTGA+GGG | - | chr3_3:65338905-65338924 | Msa0465080:intron | 20.0% |
!!! | AAACAAAATTTTTCTTCCTT+TGG | - | chr3_3:65339228-65339247 | Msa0465080:intron | 20.0% |
!!! | AACAAAATTTTTCTTCCTTT+GGG | - | chr3_3:65339229-65339248 | Msa0465080:intron | 20.0% |
!! | TTTCAACAAAAGAACAATAA+TGG | - | chr3_3:65339652-65339671 | Msa0465080:intron | 20.0% |
!! | TTTATCTTCATAATGATTGA+TGG | + | chr3_3:65339840-65339859 | None:intergenic | 20.0% |
!!! | AATATACTTTTCATTCATAG+TGG | + | chr3_3:65339999-65340018 | None:intergenic | 20.0% |
!! | AGAATGATAATTCTTAAAGA+AGG | + | chr3_3:65340336-65340355 | None:intergenic | 20.0% |
!!! | AGTTTTAAATTTAGCATACA+CGG | + | chr3_3:65340680-65340699 | None:intergenic | 20.0% |
! | GAAAGTTTAAATACAAGACA+AGG | - | chr3_3:65334420-65334439 | Msa0465080:CDS | 25.0% |
! | GAAGTAATTATAATTCAGGA+TGG | + | chr3_3:65335083-65335102 | None:intergenic | 25.0% |
! | ACAGGAAGTAATTATAATTC+AGG | + | chr3_3:65335087-65335106 | None:intergenic | 25.0% |
! | GGCATTCTACAATTATAATA+GGG | + | chr3_3:65335160-65335179 | None:intergenic | 25.0% |
! | AGGCATTCTACAATTATAAT+AGG | + | chr3_3:65335161-65335180 | None:intergenic | 25.0% |
! | TATTATAATTGTAGAATGCC+TGG | - | chr3_3:65335160-65335179 | Msa0465080:intron | 25.0% |
!!! | TATAATTTTTGAAGTAGGTC+AGG | + | chr3_3:65335329-65335348 | None:intergenic | 25.0% |
! | TGACCTACTTCAAAAATTAT+AGG | - | chr3_3:65335328-65335347 | Msa0465080:intron | 25.0% |
!! | TAAAAGCCTATTTTATGCTA+AGG | - | chr3_3:65335439-65335458 | Msa0465080:intron | 25.0% |
!!! | TAATAAGTTTTGGCCTATTT+AGG | + | chr3_3:65335489-65335508 | None:intergenic | 25.0% |
! | AAATAGGCCAAAACTTATTA+AGG | - | chr3_3:65335489-65335508 | Msa0465080:CDS | 25.0% |
! | ATATGAAAAACTTAATAGGC+CGG | - | chr3_3:65335664-65335683 | Msa0465080:intron | 25.0% |
! | TAAGGCCTATTTAATTAAAC+AGG | + | chr3_3:65335731-65335750 | None:intergenic | 25.0% |
! | ACTCTCAAAAACAAAAAACT+AGG | + | chr3_3:65336200-65336219 | None:intergenic | 25.0% |
! | CTTATAACAAACTCAAGATT+TGG | + | chr3_3:65336300-65336319 | None:intergenic | 25.0% |
! | CAAAAATAGAAATGCTACAT+AGG | + | chr3_3:65336666-65336685 | None:intergenic | 25.0% |
! | ATCTTTAGTCACTCTAATAT+AGG | + | chr3_3:65337418-65337437 | None:intergenic | 25.0% |
! | AAATAAAATGCTTACCCATT+TGG | + | chr3_3:65337995-65338014 | None:intergenic | 25.0% |
!! | TTCTTTTCGCAAATTATTAC+CGG | - | chr3_3:65338114-65338133 | Msa0465080:CDS | 25.0% |
!! | ATTTTCTTGGACAATAACAA+AGG | - | chr3_3:65338721-65338740 | Msa0465080:intron | 25.0% |
! | TGAAATTATCAAGGATTACT+TGG | - | chr3_3:65338747-65338766 | Msa0465080:intron | 25.0% |
!! | TCATTGATTAGAAATTCTTC+TGG | + | chr3_3:65338999-65339018 | None:intergenic | 25.0% |
!! | TAAATGCAATTTTCTCTTCA+GGG | + | chr3_3:65339033-65339052 | None:intergenic | 25.0% |
! | AATATAAATGCTTCAAAGCA+GGG | - | chr3_3:65339089-65339108 | Msa0465080:intron | 25.0% |
!!! | GGATTTTATGCAAATTTGTT+TGG | - | chr3_3:65339200-65339219 | Msa0465080:intron | 25.0% |
! | TTTCAGTCATTTGTTTCATT+CGG | - | chr3_3:65339398-65339417 | Msa0465080:intron | 25.0% |
!!! | TAATTTGTTCTTTCTGATAG+GGG | + | chr3_3:65339703-65339722 | None:intergenic | 25.0% |
!!! | GTAATTTGTTCTTTCTGATA+GGG | + | chr3_3:65339704-65339723 | None:intergenic | 25.0% |
!!! | TGTAATTTGTTCTTTCTGAT+AGG | + | chr3_3:65339705-65339724 | None:intergenic | 25.0% |
! | AAACTCGTGTTTAAATAGTA+AGG | + | chr3_3:65340141-65340160 | None:intergenic | 25.0% |
!!! | AAGAATAACAAAACGGATTA+AGG | + | chr3_3:65340388-65340407 | None:intergenic | 25.0% |
! | CATAAGATTATGAAAAGAAC+TGG | - | chr3_3:65340456-65340475 | Msa0465080:intron | 25.0% |
!! | TTTGTTTGCAGATTCATTTT+AGG | - | chr3_3:65340759-65340778 | Msa0465080:CDS | 25.0% |
! | ATTTTTCACAGGTAAGTCTT+TGG | + | chr3_3:65334378-65334397 | None:intergenic | 30.0% |
TCATCATAGTGATGAATCAA+AGG | - | chr3_3:65334538-65334557 | Msa0465080:intron | 30.0% | |
CTTCAATGTTCTAACAAGAA+TGG | - | chr3_3:65334650-65334669 | Msa0465080:CDS | 30.0% | |
GAAGGAATATAATTGAGTGA+AGG | + | chr3_3:65334709-65334728 | None:intergenic | 30.0% | |
AATATGATGAAAACTTGCAC+AGG | + | chr3_3:65335105-65335124 | None:intergenic | 30.0% | |
!!! | AGGCCTATAATTTTTGAAGT+AGG | + | chr3_3:65335334-65335353 | None:intergenic | 30.0% |
! | CTTTAGGCCTTAATAAGTTT+TGG | + | chr3_3:65335499-65335518 | None:intergenic | 30.0% |
CAAACATATTTGTGTGCTTT+AGG | + | chr3_3:65335515-65335534 | None:intergenic | 30.0% | |
CCTATTTAATTAAACAGGTC+AGG | + | chr3_3:65335726-65335745 | None:intergenic | 30.0% | |
CCTGACCTGTTTAATTAAAT+AGG | - | chr3_3:65335723-65335742 | Msa0465080:intron | 30.0% | |
TTTACACTGTATTGTACGTA+GGG | + | chr3_3:65335857-65335876 | None:intergenic | 30.0% | |
! | TTTTACACTGTATTGTACGT+AGG | + | chr3_3:65335858-65335877 | None:intergenic | 30.0% |
GTACAATACAGTGTAAAACA+TGG | - | chr3_3:65335860-65335879 | Msa0465080:intron | 30.0% | |
AATTATAAAAAAGGGCAACC+CGG | + | chr3_3:65336078-65336097 | None:intergenic | 30.0% | |
GTAACAAATATCACATCCTA+AGG | + | chr3_3:65336399-65336418 | None:intergenic | 30.0% | |
! | ATGTGATATTTGTTACATGC+AGG | - | chr3_3:65336403-65336422 | Msa0465080:intron | 30.0% |
ATCATGAGGTAAAAAAGTCA+AGG | + | chr3_3:65336594-65336613 | None:intergenic | 30.0% | |
ATCTTGATTCATGAATCATG+AGG | + | chr3_3:65336608-65336627 | None:intergenic | 30.0% | |
ATAGAAATGCTACATAGGAT+TGG | + | chr3_3:65336661-65336680 | None:intergenic | 30.0% | |
TTCACAAAACAGTGGATATA+AGG | + | chr3_3:65336689-65336708 | None:intergenic | 30.0% | |
! | TTATATCCACTGTTTTGTGA+AGG | - | chr3_3:65336688-65336707 | Msa0465080:intron | 30.0% |
TTAATTGAAGCAGTTGAGTT+TGG | + | chr3_3:65336871-65336890 | None:intergenic | 30.0% | |
AAACTCAACTGCTTCAATTA+AGG | - | chr3_3:65336870-65336889 | Msa0465080:intron | 30.0% | |
AATTGATGAGATGAAATGTG+AGG | + | chr3_3:65336916-65336935 | None:intergenic | 30.0% | |
TCTTTCCTAAACTGAGAATT+GGG | + | chr3_3:65337249-65337268 | None:intergenic | 30.0% | |
ATCTTTCCTAAACTGAGAAT+TGG | + | chr3_3:65337250-65337269 | None:intergenic | 30.0% | |
AAAGATTTAGCAGAACTACA+AGG | - | chr3_3:65337264-65337283 | Msa0465080:intron | 30.0% | |
AAGATTTAGCAGAACTACAA+GGG | - | chr3_3:65337265-65337284 | Msa0465080:intron | 30.0% | |
AGCTGCTTCAAAATTAGTTA+AGG | - | chr3_3:65337368-65337387 | Msa0465080:intron | 30.0% | |
! | AATATAGGTTTGTTCTTCAG+TGG | + | chr3_3:65337403-65337422 | None:intergenic | 30.0% |
! | TTGATGTACTTGTTAGTGTA+TGG | - | chr3_3:65337442-65337461 | Msa0465080:CDS | 30.0% |
TTCCTTATGGGAATTCATTT+CGG | - | chr3_3:65337475-65337494 | Msa0465080:CDS | 30.0% | |
ATTCTTTACAAGATAATGCC+TGG | - | chr3_3:65337504-65337523 | Msa0465080:CDS | 30.0% | |
! | ATGAAAGGTGTGATAGAAAA+TGG | - | chr3_3:65337603-65337622 | Msa0465080:CDS | 30.0% |
! | TGAAAGGTGTGATAGAAAAT+GGG | - | chr3_3:65337604-65337623 | Msa0465080:CDS | 30.0% |
GATAAACAAAGAACATTTGC+TGG | - | chr3_3:65337710-65337729 | Msa0465080:CDS | 30.0% | |
!! | ATGTGTTGCTGCATATTTTA+AGG | - | chr3_3:65337826-65337845 | Msa0465080:CDS | 30.0% |
!!! | TGGAATTTTAGTTATCCAGT+TGG | - | chr3_3:65337926-65337945 | Msa0465080:CDS | 30.0% |
TGACTTCATTCTCTTCTAAT+AGG | - | chr3_3:65338210-65338229 | Msa0465080:CDS | 30.0% | |
!! | TGTTACTGTAGCTTTAATTG+AGG | - | chr3_3:65338272-65338291 | Msa0465080:CDS | 30.0% |
!! | GTTACTGTAGCTTTAATTGA+GGG | - | chr3_3:65338273-65338292 | Msa0465080:CDS | 30.0% |
!! | TTACTGTAGCTTTAATTGAG+GGG | - | chr3_3:65338274-65338293 | Msa0465080:CDS | 30.0% |
GATATTAGAGTTTGATGCTA+TGG | - | chr3_3:65338517-65338536 | Msa0465080:intron | 30.0% | |
!!! | TGTGGAAGTTTTGATTTTGA+TGG | - | chr3_3:65338562-65338581 | Msa0465080:intron | 30.0% |
ATTCTGTTGATGTATGCTTT+AGG | + | chr3_3:65338633-65338652 | None:intergenic | 30.0% | |
AAAGCATACATCAACAGAAT+TGG | - | chr3_3:65338633-65338652 | Msa0465080:intron | 30.0% | |
! | GTTGCATTTGAGAATTTTCT+TGG | - | chr3_3:65338708-65338727 | Msa0465080:intron | 30.0% |
CAAAGGAGTTGAAATTATCA+AGG | - | chr3_3:65338738-65338757 | Msa0465080:intron | 30.0% | |
TCTACATTCCAGAAATTGTT+TGG | - | chr3_3:65338966-65338985 | Msa0465080:intron | 30.0% | |
CTACATTCCAGAAATTGTTT+GGG | - | chr3_3:65338967-65338986 | Msa0465080:intron | 30.0% | |
TTGATTAGAAATTCTTCTGG+AGG | + | chr3_3:65338996-65339015 | None:intergenic | 30.0% | |
! | GTAAATGCAATTTTCTCTTC+AGG | + | chr3_3:65339034-65339053 | None:intergenic | 30.0% |
GAAGAGAAAATTGCATTTAC+AGG | - | chr3_3:65339034-65339053 | Msa0465080:intron | 30.0% | |
GCATTTACAGGTACTAAATT+TGG | - | chr3_3:65339046-65339065 | Msa0465080:intron | 30.0% | |
CAATATAAATGCTTCAAAGC+AGG | - | chr3_3:65339088-65339107 | Msa0465080:intron | 30.0% | |
TGTTATCAATATCTTCCCAA+AGG | + | chr3_3:65339247-65339266 | None:intergenic | 30.0% | |
ATCAATGTGACTTTGACAAA+AGG | + | chr3_3:65339555-65339574 | None:intergenic | 30.0% | |
TTGACAGTTTGACAGAATTA+CGG | + | chr3_3:65339581-65339600 | None:intergenic | 30.0% | |
TCAATCAAAGCATACATGAT+GGG | - | chr3_3:65339597-65339616 | Msa0465080:intron | 30.0% | |
AAAGAACAATAATGGCATTG+TGG | - | chr3_3:65339660-65339679 | Msa0465080:intron | 30.0% | |
! | TGATTGATGGTTACCTTAAT+TGG | + | chr3_3:65339827-65339846 | None:intergenic | 30.0% |
GCTATCATGTTCATATCATA+AGG | + | chr3_3:65339893-65339912 | None:intergenic | 30.0% | |
! | AAATCCTTTTCAATCTCTTG+AGG | - | chr3_3:65339941-65339960 | Msa0465080:intron | 30.0% |
ATTTCCTCAAGAGATTGAAA+AGG | + | chr3_3:65339948-65339967 | None:intergenic | 30.0% | |
! | AGCATTTTCTTTGTTGCAAA+AGG | - | chr3_3:65340090-65340109 | Msa0465080:intron | 30.0% |
TCGACGATAATGTTGTAAAA+TGG | - | chr3_3:65340114-65340133 | Msa0465080:intron | 30.0% | |
CTATTATCACTGAAAGCTTA+GGG | + | chr3_3:65340175-65340194 | None:intergenic | 30.0% | |
TCTATTATCACTGAAAGCTT+AGG | + | chr3_3:65340176-65340195 | None:intergenic | 30.0% | |
AGCTTTCAGTGATAATAGAA+AGG | - | chr3_3:65340177-65340196 | Msa0465080:intron | 30.0% | |
AAACATAGAACACACAATGT+TGG | + | chr3_3:65340264-65340283 | None:intergenic | 30.0% | |
!! | TCAGTGATGGAAATTTTTGA+TGG | - | chr3_3:65340420-65340439 | Msa0465080:intron | 30.0% |
!! | CAGTGATGGAAATTTTTGAT+GGG | - | chr3_3:65340421-65340440 | Msa0465080:intron | 30.0% |
!! | AGTGATGGAAATTTTTGATG+GGG | - | chr3_3:65340422-65340441 | Msa0465080:intron | 30.0% |
TATGAAAAGAACTGGTTGTA+TGG | - | chr3_3:65340464-65340483 | Msa0465080:intron | 30.0% | |
ATGTTACGTACCAATTTAAC+AGG | - | chr3_3:65340538-65340557 | Msa0465080:intron | 30.0% | |
AATGAAGTTATGATCCTCAA+TGG | - | chr3_3:65340633-65340652 | Msa0465080:CDS | 30.0% | |
AAATATCAGACTCTCTTCTA+TGG | + | chr3_3:65340740-65340759 | None:intergenic | 30.0% | |
ATGTATACATTGGCATTATG+TGG | - | chr3_3:65340828-65340847 | Msa0465080:CDS | 30.0% | |
! | TTCACACGAGAATTTTTCAC+AGG | + | chr3_3:65334389-65334408 | None:intergenic | 35.0% |
ACAAACTCCTCGTTCAAAAT+GGG | + | chr3_3:65334467-65334486 | None:intergenic | 35.0% | |
AACAAACTCCTCGTTCAAAA+TGG | + | chr3_3:65334468-65334487 | None:intergenic | 35.0% | |
!!! | GAACGAGGAGTTTGTTTTTA+AGG | - | chr3_3:65334472-65334491 | Msa0465080:CDS | 35.0% |
!!! | GGAGTTTGTTTTTAAGGTGA+AGG | - | chr3_3:65334478-65334497 | Msa0465080:CDS | 35.0% |
TAGTGATGAATCAAAGGTAG+TGG | - | chr3_3:65334544-65334563 | Msa0465080:intron | 35.0% | |
!!! | TCAAAGGTAGTGGATTTTGT+TGG | - | chr3_3:65334554-65334573 | Msa0465080:intron | 35.0% |
CAACGTGATCATCTAAAAGA+AGG | + | chr3_3:65334727-65334746 | None:intergenic | 35.0% | |
! | TTTGTATTTTCTTCGGGTCT+AGG | - | chr3_3:65334997-65335016 | Msa0465080:intron | 35.0% |
GTTGTTGTCATGTGATTGAA+AGG | - | chr3_3:65335196-65335215 | Msa0465080:intron | 35.0% | |
! | CTTACCATGTTTTACACAAG+AGG | + | chr3_3:65335247-65335266 | None:intergenic | 35.0% |
CTCTTGTGTAAAACATGGTA+AGG | - | chr3_3:65335245-65335264 | Msa0465080:intron | 35.0% | |
!! | GCTTCATCAGGCTTTTAAAA+AGG | + | chr3_3:65335406-65335425 | None:intergenic | 35.0% |
! | AGGCTTTTAAATAGGCTTTC+AGG | + | chr3_3:65335428-65335447 | None:intergenic | 35.0% |
ATGTAAGCCTACTCCTAAAT+AGG | - | chr3_3:65335473-65335492 | Msa0465080:intron | 35.0% | |
TAATTAAACAGGTCAGGCTA+AGG | + | chr3_3:65335720-65335739 | None:intergenic | 35.0% | |
TTACACTGTATTGTACGTAG+GGG | + | chr3_3:65335856-65335875 | None:intergenic | 35.0% | |
GTGCAATAGAGCTCAAAAAA+GGG | + | chr3_3:65335966-65335985 | None:intergenic | 35.0% | |
!!! | TTTTTTGAGCTCTATTGCAC+CGG | - | chr3_3:65335966-65335985 | Msa0465080:CDS | 35.0% |
GTGCAATAGAGCTCAAAAAA+GGG | + | chr3_3:65335966-65335985 | None:intergenic | 35.0% | |
!!! | TTTTTTGAGCTCTATTGCAC+CGG | - | chr3_3:65335966-65335985 | Msa0465080:CDS | 35.0% |
ATGCTGAAACTTTGCTAGAT+AGG | - | chr3_3:65336103-65336122 | Msa0465080:CDS | 35.0% | |
TGCTGAAACTTTGCTAGATA+GGG | - | chr3_3:65336104-65336123 | Msa0465080:CDS | 35.0% | |
GCATTATTTCAACGTTGATG+TGG | - | chr3_3:65336172-65336191 | Msa0465080:intron | 35.0% | |
!! | TATGTTGAGAAGAGTGTTAG+AGG | + | chr3_3:65336476-65336495 | None:intergenic | 35.0% |
GTTAAACCTTCACAAAACAG+TGG | + | chr3_3:65336697-65336716 | None:intergenic | 35.0% | |
GCTTGTGTTGTACATAATCA+GGG | - | chr3_3:65336779-65336798 | Msa0465080:CDS | 35.0% | |
AAAAATCGGAAAATGGGTGA+AGG | - | chr3_3:65336943-65336962 | Msa0465080:CDS | 35.0% | |
TTATCGCTAATCGCATAGAA+AGG | - | chr3_3:65336983-65337002 | Msa0465080:CDS | 35.0% | |
! | TGATGTTTCTGAACAATCCA+CGG | + | chr3_3:65337040-65337059 | None:intergenic | 35.0% |
TGCCTTCTTCAAAACTACAA+GGG | + | chr3_3:65337107-65337126 | None:intergenic | 35.0% | |
ATGCCTTCTTCAAAACTACA+AGG | + | chr3_3:65337108-65337127 | None:intergenic | 35.0% | |
!! | AATTTTCAGGACTTTCTGGT+CGG | + | chr3_3:65337155-65337174 | None:intergenic | 35.0% |
!! | TGCAAATTTTCAGGACTTTC+TGG | + | chr3_3:65337159-65337178 | None:intergenic | 35.0% |
AGAAAGTCCTGAAAATTTGC+AGG | - | chr3_3:65337158-65337177 | Msa0465080:intron | 35.0% | |
GAAAGTCCTGAAAATTTGCA+GGG | - | chr3_3:65337159-65337178 | Msa0465080:intron | 35.0% | |
GGACAACAAATTTGCAAGAA+GGG | - | chr3_3:65337286-65337305 | Msa0465080:intron | 35.0% | |
GACAACAAATTTGCAAGAAG+GGG | - | chr3_3:65337287-65337306 | Msa0465080:intron | 35.0% | |
AGACATATCTTCATCTTTCC+AGG | + | chr3_3:65337319-65337338 | None:intergenic | 35.0% | |
TCCTTATGGGAATTCATTTC+GGG | - | chr3_3:65337476-65337495 | Msa0465080:CDS | 35.0% | |
AGAAGATTTGTCTTGTGTAG+AGG | - | chr3_3:65337527-65337546 | Msa0465080:CDS | 35.0% | |
CTCACATCTTGTGATATCAT+GGG | - | chr3_3:65337554-65337573 | Msa0465080:CDS | 35.0% | |
TCACATCTTGTGATATCATG+GGG | - | chr3_3:65337555-65337574 | Msa0465080:CDS | 35.0% | |
CTTTCATCATTGTGCTTTGT+AGG | + | chr3_3:65337590-65337609 | None:intergenic | 35.0% | |
CTACAAAGCACAATGATGAA+AGG | - | chr3_3:65337588-65337607 | Msa0465080:CDS | 35.0% | |
! | GAAAGGTGTGATAGAAAATG+GGG | - | chr3_3:65337605-65337624 | Msa0465080:CDS | 35.0% |
ATAGAAAATGGGGCTAAACA+AGG | - | chr3_3:65337615-65337634 | Msa0465080:CDS | 35.0% | |
!!! | TTGCTGCATATTTTAAGGTG+TGG | - | chr3_3:65337831-65337850 | Msa0465080:CDS | 35.0% |
TTAGGAGAACTAGTAACAAG+TGG | - | chr3_3:65337906-65337925 | Msa0465080:CDS | 35.0% | |
! | TTTCAGATTGAAGGTGTATC+CGG | - | chr3_3:65338068-65338087 | Msa0465080:CDS | 35.0% |
!! | AAAAGTGTCTTGTTGGTGTT+AGG | + | chr3_3:65338096-65338115 | None:intergenic | 35.0% |
!! | CGAAAAGAAAAGTGTCTTGT+TGG | + | chr3_3:65338103-65338122 | None:intergenic | 35.0% |
!! | TACTGTAGCTTTAATTGAGG+GGG | - | chr3_3:65338275-65338294 | Msa0465080:CDS | 35.0% |
! | TGATCTTGTTTGTCCATTAC+AGG | + | chr3_3:65338355-65338374 | None:intergenic | 35.0% |
ACTTCCACATACAAAACTGA+TGG | + | chr3_3:65338551-65338570 | None:intergenic | 35.0% | |
GAGAAGAAGGAAAAAGAAGT+AGG | - | chr3_3:65338769-65338788 | Msa0465080:intron | 35.0% | |
GGAAAAAGAAGTAGGCAAAA+AGG | - | chr3_3:65338777-65338796 | Msa0465080:intron | 35.0% | |
ACACACACACACACATATAT+GGG | + | chr3_3:65338824-65338843 | None:intergenic | 35.0% | |
TGGAATGTAGAATTCCTTTG+AGG | + | chr3_3:65338957-65338976 | None:intergenic | 35.0% | |
CTTCCTAATGATGCTAATGA+TGG | + | chr3_3:65339284-65339303 | None:intergenic | 35.0% | |
GAAGAATTATGGCCAATGTA+GGG | + | chr3_3:65339307-65339326 | None:intergenic | 35.0% | |
CAAGTTTGACAAAATCACAG+TGG | - | chr3_3:65339497-65339516 | Msa0465080:intron | 35.0% | |
GTCAATCAAAGCATACATGA+TGG | - | chr3_3:65339596-65339615 | Msa0465080:intron | 35.0% | |
! | ACATTTTTGCCTCATCTTCT+AGG | + | chr3_3:65339781-65339800 | None:intergenic | 35.0% |
CTTCAAAACTTCGCAAATGT+GGG | + | chr3_3:65339870-65339889 | None:intergenic | 35.0% | |
TTTGCATTGCTGAATTCAAG+AGG | + | chr3_3:65340068-65340087 | None:intergenic | 35.0% | |
CCTGTGCAAGAATAACAAAA+CGG | + | chr3_3:65340395-65340414 | None:intergenic | 35.0% | |
!! | GTGATGGAAATTTTTGATGG+GGG | - | chr3_3:65340423-65340442 | Msa0465080:intron | 35.0% |
TAAAACCTGATGTACTCGAA+AGG | - | chr3_3:65340514-65340533 | Msa0465080:intron | 35.0% | |
TATCCAAACACAAACACTGA+AGG | - | chr3_3:65340600-65340619 | Msa0465080:intron | 35.0% | |
GAAATTGAGAAATCAGCTCT+TGG | - | chr3_3:65340785-65340804 | Msa0465080:CDS | 35.0% | |
TGCAAGTGTGATGTATACAT+TGG | - | chr3_3:65340818-65340837 | Msa0465080:CDS | 35.0% | |
! | ATCCAAGTTTAAAGTTCGAC+TGG | - | chr3_3:65340895-65340914 | Msa0465080:CDS | 35.0% |
TCTCGTGTGAAGCTTAAACT+TGG | - | chr3_3:65334398-65334417 | Msa0465080:CDS | 40.0% | |
! | GTTCAATCCCATTTTGAACG+AGG | - | chr3_3:65334457-65334476 | Msa0465080:CDS | 40.0% |
TAAGGTGAAGGATATTGCTG+AGG | - | chr3_3:65334490-65334509 | Msa0465080:CDS | 40.0% | |
!! | TGGATTTTGTTGGTGAGGTA+CGG | - | chr3_3:65334564-65334583 | Msa0465080:intron | 40.0% |
AGCAAATATTGCCACCTACT+TGG | - | chr3_3:65334621-65334640 | Msa0465080:intron | 40.0% | |
GTCATGTGATTGAAAGGTCA+CGG | - | chr3_3:65335202-65335221 | Msa0465080:intron | 40.0% | |
TCATGTGATTGAAAGGTCAC+GGG | - | chr3_3:65335203-65335222 | Msa0465080:intron | 40.0% | |
ACAGCCTCTTGTGTAAAACA+TGG | - | chr3_3:65335240-65335259 | Msa0465080:intron | 40.0% | |
TGGTAAGGTTGCGTACAATT+AGG | - | chr3_3:65335260-65335279 | Msa0465080:intron | 40.0% | |
GGTAAGGTTGCGTACAATTA+GGG | - | chr3_3:65335261-65335280 | Msa0465080:intron | 40.0% | |
GTAAGGTTGCGTACAATTAG+GGG | - | chr3_3:65335262-65335281 | Msa0465080:intron | 40.0% | |
GTACAATTAGGGGTGGAAAT+GGG | - | chr3_3:65335272-65335291 | Msa0465080:intron | 40.0% | |
!!! | TTTTGAAGTAGGTCAGGCTT+AGG | + | chr3_3:65335323-65335342 | None:intergenic | 40.0% |
AAAAATTATAGGCCTGAGCC+TGG | - | chr3_3:65335339-65335358 | Msa0465080:intron | 40.0% | |
!! | ATCAGGCTTTTAAAAAGGCC+AGG | + | chr3_3:65335401-65335420 | None:intergenic | 40.0% |
! | GCCTATTTTATGCTAAGGCT+TGG | - | chr3_3:65335444-65335463 | Msa0465080:intron | 40.0% |
GCCAAGCCTTAGCATAAAAT+AGG | + | chr3_3:65335448-65335467 | None:intergenic | 40.0% | |
!! | GTTTTGGCCTATTTAGGAGT+AGG | + | chr3_3:65335483-65335502 | None:intergenic | 40.0% |
AAAAGCCTATTAAGCCCATC+AGG | + | chr3_3:65335690-65335709 | None:intergenic | 40.0% | |
! | CCAGGCTCAAGCTTTTTATA+AGG | + | chr3_3:65335749-65335768 | None:intergenic | 40.0% |
CCTTATAAAAAGCTTGAGCC+TGG | - | chr3_3:65335746-65335765 | Msa0465080:intron | 40.0% | |
! | GCCTTGTTAATAAACGAGCT+AGG | - | chr3_3:65335768-65335787 | Msa0465080:intron | 40.0% |
GCCTAGCTCGTTTATTAACA+AGG | + | chr3_3:65335772-65335791 | None:intergenic | 40.0% | |
! | AGCCTATTTAAAGCCTAGCT+CGG | + | chr3_3:65335794-65335813 | None:intergenic | 40.0% |
!! | AGCTAGGCTTTAAATAGGCT+AGG | - | chr3_3:65335794-65335813 | Msa0465080:intron | 40.0% |
CTTTAAATAGGCTAGGCTGT+AGG | - | chr3_3:65335801-65335820 | Msa0465080:intron | 40.0% | |
GTTGCGTACAATACACCAAA+TGG | - | chr3_3:65335887-65335906 | Msa0465080:intron | 40.0% | |
CGTACAATACACCAAATGGT+GGG | - | chr3_3:65335891-65335910 | Msa0465080:intron | 40.0% | |
GGTGCAATAGAGCTCAAAAA+AGG | + | chr3_3:65335967-65335986 | None:intergenic | 40.0% | |
!! | TTTTTGAGCTCTATTGCACC+GGG | - | chr3_3:65335967-65335986 | Msa0465080:CDS | 40.0% |
GGTGCAATAGAGCTCAAAAA+AGG | + | chr3_3:65335967-65335986 | None:intergenic | 40.0% | |
!! | TTTTTGAGCTCTATTGCACC+GGG | - | chr3_3:65335967-65335986 | Msa0465080:CDS | 40.0% |
GCTGAAACTTTGCTAGATAG+GGG | - | chr3_3:65336105-65336124 | Msa0465080:CDS | 40.0% | |
GGCTTGTGTTGTACATAATC+AGG | - | chr3_3:65336778-65336797 | Msa0465080:CDS | 40.0% | |
AGATGAAATGTGAGGACGTT+CGG | + | chr3_3:65336908-65336927 | None:intergenic | 40.0% | |
TGAAGGCAAACAGTTGTTGA+AGG | - | chr3_3:65336960-65336979 | Msa0465080:CDS | 40.0% | |
AGAACGAAACTCAAAATCCG+TGG | - | chr3_3:65337020-65337039 | Msa0465080:CDS | 40.0% | |
! | TACAAGGGGGTGAATTTTCT+TGG | + | chr3_3:65337092-65337111 | None:intergenic | 40.0% |
CCTTCTTCAAAACTACAAGG+GGG | + | chr3_3:65337105-65337124 | None:intergenic | 40.0% | |
GCCTTCTTCAAAACTACAAG+GGG | + | chr3_3:65337106-65337125 | None:intergenic | 40.0% | |
!! | TGAAGAAGGCATTGCACTAA+TGG | - | chr3_3:65337116-65337135 | Msa0465080:intron | 40.0% |
GGGACAACAAATTTGCAAGA+AGG | - | chr3_3:65337285-65337304 | Msa0465080:intron | 40.0% | |
CAAATTTGCAAGAAGGGGAT+TGG | - | chr3_3:65337292-65337311 | Msa0465080:intron | 40.0% | |
AATTCCCATAAGGAACCTCA+GGG | + | chr3_3:65337470-65337489 | None:intergenic | 40.0% | |
ACCCGAAATGAATTCCCATA+AGG | + | chr3_3:65337480-65337499 | None:intergenic | 40.0% | |
ACACAAGACAAATCTTCTCC+AGG | + | chr3_3:65337525-65337544 | None:intergenic | 40.0% | |
CCATGATATCACAAGATGTG+AGG | + | chr3_3:65337556-65337575 | None:intergenic | 40.0% | |
CCTCACATCTTGTGATATCA+TGG | - | chr3_3:65337553-65337572 | Msa0465080:CDS | 40.0% | |
TCTTGTGATATCATGGGGAA+TGG | - | chr3_3:65337560-65337579 | Msa0465080:CDS | 40.0% | |
! | GAGGTTTAAGGTGCTAGATA+AGG | - | chr3_3:65337680-65337699 | Msa0465080:CDS | 40.0% |
! | GTTTAAGGTGCTAGATAAGG+AGG | - | chr3_3:65337683-65337702 | Msa0465080:CDS | 40.0% |
ATTGAACTGCCAGATAGCTT+AGG | - | chr3_3:65337888-65337907 | Msa0465080:CDS | 40.0% | |
! | ACTAGTTCTCCTAAGCTATC+TGG | + | chr3_3:65337900-65337919 | None:intergenic | 40.0% |
TATGATAAACACGCTCCAAC+TGG | + | chr3_3:65337944-65337963 | None:intergenic | 40.0% | |
GTTGGAGCGTGTTTATCATA+TGG | - | chr3_3:65337944-65337963 | Msa0465080:CDS | 40.0% | |
TGTGCAAGCTAGATTCCAAA+TGG | - | chr3_3:65337977-65337996 | Msa0465080:CDS | 40.0% | |
GTGCAAGCTAGATTCCAAAT+GGG | - | chr3_3:65337978-65337997 | Msa0465080:CDS | 40.0% | |
CACCAACACTTTCAGATTGA+AGG | - | chr3_3:65338059-65338078 | Msa0465080:CDS | 40.0% | |
! | CACCTTCAATCTGAAAGTGT+TGG | + | chr3_3:65338064-65338083 | None:intergenic | 40.0% |
!! | ATGAAGTGCTGACACAGATA+CGG | + | chr3_3:65338156-65338175 | None:intergenic | 40.0% |
CTTCTAATAGGAACTGACCA+TGG | - | chr3_3:65338222-65338241 | Msa0465080:CDS | 40.0% | |
TAGTCTCATTGGAGTCAACA+GGG | - | chr3_3:65338304-65338323 | Msa0465080:CDS | 40.0% | |
TTGAGACATCAGATCCTCAA+TGG | - | chr3_3:65338388-65338407 | Msa0465080:CDS | 40.0% | |
ACATCAGATCCTCAATGGAA+TGG | - | chr3_3:65338393-65338412 | Msa0465080:CDS | 40.0% | |
AAGGACAAACCATTCCATTG+AGG | + | chr3_3:65338405-65338424 | None:intergenic | 40.0% | |
CAAATAAGTGGCAAGACAGA+AGG | + | chr3_3:65338424-65338443 | None:intergenic | 40.0% | |
!! | ACCACCATCAGTTTTGTATG+TGG | - | chr3_3:65338544-65338563 | Msa0465080:intron | 40.0% |
TCCACATACAAAACTGATGG+TGG | + | chr3_3:65338548-65338567 | None:intergenic | 40.0% | |
!! | TTTTGATGGTCCATTTGACC+AGG | - | chr3_3:65338576-65338595 | Msa0465080:intron | 40.0% |
AGTGAAACATCCTGGTCAAA+TGG | + | chr3_3:65338589-65338608 | None:intergenic | 40.0% | |
TTTGACCAGGATGTTTCACT+TGG | - | chr3_3:65338589-65338608 | Msa0465080:intron | 40.0% | |
AACAGAATTGGCAGACATGT+GGG | - | chr3_3:65338645-65338664 | Msa0465080:intron | 40.0% | |
CAAGGATTACTTGGAGAAGA+AGG | - | chr3_3:65338756-65338775 | Msa0465080:intron | 40.0% | |
CACACACACACACATATATG+GGG | + | chr3_3:65338823-65338842 | None:intergenic | 40.0% | |
CACACACACACACACATATA+TGG | + | chr3_3:65338825-65338844 | None:intergenic | 40.0% | |
TCAATCTTCCATCACCTCAA+AGG | - | chr3_3:65338940-65338959 | Msa0465080:intron | 40.0% | |
!! | GTAGAATTCCTTTGAGGTGA+TGG | + | chr3_3:65338951-65338970 | None:intergenic | 40.0% |
ATGACCATGACTTCTAATGC+AGG | - | chr3_3:65339148-65339167 | Msa0465080:intron | 40.0% | |
TGACCATGACTTCTAATGCA+GGG | - | chr3_3:65339149-65339168 | Msa0465080:intron | 40.0% | |
!! | TCGGCTATTTCTTTCTGCAA+GGG | - | chr3_3:65339172-65339191 | Msa0465080:intron | 40.0% |
ATTTCTTTCTGCAAGGGTTC+TGG | - | chr3_3:65339178-65339197 | Msa0465080:intron | 40.0% | |
TTTCTTTCTGCAAGGGTTCT+GGG | - | chr3_3:65339179-65339198 | Msa0465080:intron | 40.0% | |
CCTAATGATGCTAATGATGG+AGG | + | chr3_3:65339281-65339300 | None:intergenic | 40.0% | |
CCTCCATCATTAGCATCATT+AGG | - | chr3_3:65339278-65339297 | Msa0465080:intron | 40.0% | |
ATCATTAGGAAGCCCTACAT+TGG | - | chr3_3:65339292-65339311 | Msa0465080:intron | 40.0% | |
CGAAGAATTATGGCCAATGT+AGG | + | chr3_3:65339308-65339327 | None:intergenic | 40.0% | |
TTGGCCATAATTCTTCGAAG+AGG | - | chr3_3:65339311-65339330 | Msa0465080:intron | 40.0% | |
TCGTCCTCTTCGAAGAATTA+TGG | + | chr3_3:65339318-65339337 | None:intergenic | 40.0% | |
ATAATTCTTCGAAGAGGACG+AGG | - | chr3_3:65339317-65339336 | Msa0465080:intron | 40.0% | |
AAGATGAAGAAGGAAGGCTT+AGG | - | chr3_3:65339369-65339388 | Msa0465080:intron | 40.0% | |
! | TGCTGATTAAGAATACCTGG+AGG | + | chr3_3:65339429-65339448 | None:intergenic | 40.0% |
! | GCATGCTGATTAAGAATACC+TGG | + | chr3_3:65339432-65339451 | None:intergenic | 40.0% |
TTATCAGTTGAGTGCATGCT+TGG | - | chr3_3:65339466-65339485 | Msa0465080:intron | 40.0% | |
! | AGAAGAGCATGAAGATCAAG+AGG | - | chr3_3:65339724-65339743 | Msa0465080:intron | 40.0% |
TGGATCTATCCTAGAAGATG+AGG | - | chr3_3:65339769-65339788 | Msa0465080:intron | 40.0% | |
AAGATGAGGCAAAAATGTCC+AGG | - | chr3_3:65339783-65339802 | Msa0465080:intron | 40.0% | |
TAGTTCAGCAGAGTAAATCC+TGG | + | chr3_3:65339804-65339823 | None:intergenic | 40.0% | |
CTCTGCTGAACTACCAATTA+AGG | - | chr3_3:65339811-65339830 | Msa0465080:intron | 40.0% | |
GCTTCAAAACTTCGCAAATG+TGG | + | chr3_3:65339871-65339890 | None:intergenic | 40.0% | |
GAACACACAATGTTGGATCA+CGG | + | chr3_3:65340257-65340276 | None:intergenic | 40.0% | |
!! | AAACGGATTAAGGAGAGACT+TGG | + | chr3_3:65340378-65340397 | None:intergenic | 40.0% |
!!! | CCGTTTTGTTATTCTTGCAC+AGG | - | chr3_3:65340392-65340411 | Msa0465080:intron | 40.0% |
! | TCGAGTACATCAGGTTTTAC+TGG | + | chr3_3:65340513-65340532 | None:intergenic | 40.0% |
CTGACACATGCCTGTTAAAT+TGG | + | chr3_3:65340551-65340570 | None:intergenic | 40.0% | |
CTTCCTTCAGTGTTTGTGTT+TGG | + | chr3_3:65340606-65340625 | None:intergenic | 40.0% | |
CAAACACAAACACTGAAGGA+AGG | - | chr3_3:65340604-65340623 | Msa0465080:intron | 40.0% | |
ACACGGAAGTGATCAGAAAA+TGG | + | chr3_3:65340663-65340682 | None:intergenic | 40.0% | |
ACATTGGCATTATGTGGCTT+AGG | - | chr3_3:65340834-65340853 | Msa0465080:CDS | 40.0% | |
AGTTTCAGCAAAGGATCAAC+AGG | - | chr3_3:65340864-65340883 | Msa0465080:CDS | 40.0% | |
CTCCAGTCGAACTTTAAACT+TGG | + | chr3_3:65340900-65340919 | None:intergenic | 40.0% | |
! | CAAGTTTAAAGTTCGACTGG+AGG | - | chr3_3:65340898-65340917 | Msa0465080:CDS | 40.0% |
!!! | GGTAGTGGATTTTGTTGGTG+AGG | - | chr3_3:65334559-65334578 | Msa0465080:intron | 45.0% |
TCAAAACCAACCTCACCAAC+AGG | + | chr3_3:65334593-65334612 | None:intergenic | 45.0% | |
!!! | TGTTGGTGAGGTTGGTTTTG+AGG | - | chr3_3:65334592-65334611 | Msa0465080:intron | 45.0% |
CATTGAAGCTCGAACCAAGT+AGG | + | chr3_3:65334638-65334657 | None:intergenic | 45.0% | |
TGGATAGCTCGCTTGAGTTA+AGG | + | chr3_3:65335063-65335082 | None:intergenic | 45.0% | |
! | TTACACAAGAGGCTGTTTCC+AGG | + | chr3_3:65335236-65335255 | None:intergenic | 45.0% |
CGTACAATTAGGGGTGGAAA+TGG | - | chr3_3:65335271-65335290 | Msa0465080:intron | 45.0% | |
CTCGAAAATGAGCCTATGAC+GGG | + | chr3_3:65335372-65335391 | None:intergenic | 45.0% | |
CCTCGAAAATGAGCCTATGA+CGG | + | chr3_3:65335373-65335392 | None:intergenic | 45.0% | |
ATAGGCTTTCAGGCTTCATC+AGG | + | chr3_3:65335418-65335437 | None:intergenic | 45.0% | |
GCTCGTTTATTAACAAGGCC+AGG | + | chr3_3:65335767-65335786 | None:intergenic | 45.0% | |
ACTGTATTGTACGTAGGGGT+GGG | + | chr3_3:65335852-65335871 | None:intergenic | 45.0% | |
GCGTACAATACACCAAATGG+TGG | - | chr3_3:65335890-65335909 | Msa0465080:intron | 45.0% | |
AGCTCAAAAAAGGGAAACCC+CGG | + | chr3_3:65335957-65335976 | None:intergenic | 45.0% | |
!!! | CCCCCTTGTAGTTTTGAAGA+AGG | - | chr3_3:65337102-65337121 | Msa0465080:intron | 45.0% |
AGTCCTGAAAATTTGCAGGG+CGG | - | chr3_3:65337162-65337181 | Msa0465080:intron | 45.0% | |
! | ATACCGCCCTGCAAATTTTC+AGG | + | chr3_3:65337168-65337187 | None:intergenic | 45.0% |
ATTCCCATAAGGAACCTCAG+GGG | + | chr3_3:65337469-65337488 | None:intergenic | 45.0% | |
GAATTCCCATAAGGAACCTC+AGG | + | chr3_3:65337471-65337490 | None:intergenic | 45.0% | |
TGGGGCTAAACAAGGTTTGA+AGG | - | chr3_3:65337623-65337642 | Msa0465080:CDS | 45.0% | |
GAGCAAGTAGGTTAGCAAAC+TGG | + | chr3_3:65337659-65337678 | None:intergenic | 45.0% | |
TTGCTAACCTACTTGCTCAG+AGG | - | chr3_3:65337661-65337680 | Msa0465080:CDS | 45.0% | |
CCTTAAACCTCTGAGCAAGT+AGG | + | chr3_3:65337671-65337690 | None:intergenic | 45.0% | |
CCTACTTGCTCAGAGGTTTA+AGG | - | chr3_3:65337668-65337687 | Msa0465080:CDS | 45.0% | |
AGACAGAAAGCCAGTGGAAT+TGG | - | chr3_3:65337742-65337761 | Msa0465080:CDS | 45.0% | |
GGCAGGCAATTACATACTTC+TGG | - | chr3_3:65337766-65337785 | Msa0465080:CDS | 45.0% | |
!! | TGAAAGCACATGGTGATGGA+TGG | - | chr3_3:65338247-65338266 | Msa0465080:CDS | 45.0% |
!! | GAAAGCACATGGTGATGGAT+GGG | - | chr3_3:65338248-65338267 | Msa0465080:CDS | 45.0% |
!! | CTGTTGACTCCAATGAGACT+AGG | + | chr3_3:65338305-65338324 | None:intergenic | 45.0% |
CTAGTCTCATTGGAGTCAAC+AGG | - | chr3_3:65338303-65338322 | Msa0465080:CDS | 45.0% | |
CATGTCCAAGTGAAACATCC+TGG | + | chr3_3:65338597-65338616 | None:intergenic | 45.0% | |
CAACAGAATTGGCAGACATG+TGG | - | chr3_3:65338644-65338663 | Msa0465080:intron | 45.0% | |
CAACTTCGATTGAGCAGACT+GGG | + | chr3_3:65338692-65338711 | None:intergenic | 45.0% | |
GAGGCAACCCAAACAATTTC+TGG | + | chr3_3:65338977-65338996 | None:intergenic | 45.0% | |
CATGACTTCTAATGCAGGGT+CGG | - | chr3_3:65339153-65339172 | Msa0465080:intron | 45.0% | |
!! | GTCGGCTATTTCTTTCTGCA+AGG | - | chr3_3:65339171-65339190 | Msa0465080:intron | 45.0% |
TCCTTCTTCATCTTGCGTCT+TGG | + | chr3_3:65339363-65339382 | None:intergenic | 45.0% | |
AGACGCAAGATGAAGAAGGA+AGG | - | chr3_3:65339363-65339382 | Msa0465080:intron | 45.0% | |
TGAGTGCATGCTTGGAATCA+CGG | - | chr3_3:65339474-65339493 | Msa0465080:intron | 45.0% | |
GCATGAAGATCAAGAGGTCT+TGG | - | chr3_3:65339730-65339749 | Msa0465080:intron | 45.0% | |
!! | TTGGTAATGCCTGAAGACTC+TGG | - | chr3_3:65339749-65339768 | Msa0465080:intron | 45.0% |
AGGATAGATCCAGAGTCTTC+AGG | + | chr3_3:65339761-65339780 | None:intergenic | 45.0% | |
AGGTTGACACAACAGCAAAC+AGG | + | chr3_3:65340316-65340335 | None:intergenic | 45.0% | |
TGCACAGGTAAGTTCAGTGA+TGG | - | chr3_3:65340407-65340426 | Msa0465080:intron | 45.0% | |
TGGACTATGACACTACACCT+TGG | - | chr3_3:65340484-65340503 | Msa0465080:intron | 45.0% | |
GGACTATGACACTACACCTT+GGG | - | chr3_3:65340485-65340504 | Msa0465080:intron | 45.0% | |
!!! | TCAGGTTTTACTGGTTCCCA+AGG | + | chr3_3:65340504-65340523 | None:intergenic | 45.0% |
! | ACATGCCTTTCGAGTACATC+AGG | + | chr3_3:65340522-65340541 | None:intergenic | 45.0% |
CAGAAAATGGAACGCCATTG+AGG | + | chr3_3:65340650-65340669 | None:intergenic | 45.0% | |
!! | GGAGCTCTAAGTTTCAGCAA+AGG | - | chr3_3:65340855-65340874 | Msa0465080:CDS | 45.0% |
TGAAGCTCGAACCAAGTAGG+TGG | + | chr3_3:65334635-65334654 | None:intergenic | 50.0% | |
ACAACTTTACCAGTTGCGCC+AGG | + | chr3_3:65335181-65335200 | None:intergenic | 50.0% | |
AGGTTGCGTACAATTAGGGG+TGG | - | chr3_3:65335265-65335284 | Msa0465080:intron | 50.0% | |
! | ATTAGGGGTGGAAATGGGCT+AGG | - | chr3_3:65335277-65335296 | Msa0465080:intron | 50.0% |
!! | ATGAGCCTATGACGGGTAAC+AGG | + | chr3_3:65335365-65335384 | None:intergenic | 50.0% |
! | CCGTCATAGGCTCATTTTCG+AGG | - | chr3_3:65335370-65335389 | Msa0465080:intron | 50.0% |
!! | ATAGGCTCATTTTCGAGGCC+TGG | - | chr3_3:65335375-65335394 | Msa0465080:intron | 50.0% |
!! | GCTTTTAAAAAGGCCAGGCC+AGG | + | chr3_3:65335396-65335415 | None:intergenic | 50.0% |
AACTTAATAGGCCGGCCTGA+TGG | - | chr3_3:65335672-65335691 | Msa0465080:intron | 50.0% | |
ACTTAATAGGCCGGCCTGAT+GGG | - | chr3_3:65335673-65335692 | Msa0465080:intron | 50.0% | |
!! | GGCCGAGCTAGGCTTTAAAT+AGG | - | chr3_3:65335789-65335808 | Msa0465080:intron | 50.0% |
TTGTACGTAGGGGTGGGAAT+AGG | + | chr3_3:65335846-65335865 | None:intergenic | 50.0% | |
CACTGTATTGTACGTAGGGG+TGG | + | chr3_3:65335853-65335872 | None:intergenic | 50.0% | |
ATAGAGCTCCCGCATATGCA+GGG | + | chr3_3:65335930-65335949 | None:intergenic | 50.0% | |
AATAGAGCTCCCGCATATGC+AGG | + | chr3_3:65335931-65335950 | None:intergenic | 50.0% | |
ATAGAGCTCCCGCATATGCA+GGG | + | chr3_3:65335930-65335949 | None:intergenic | 50.0% | |
AATAGAGCTCCCGCATATGC+AGG | + | chr3_3:65335931-65335950 | None:intergenic | 50.0% | |
TCGCGCCCAATTCTCAGTTT+AGG | - | chr3_3:65337241-65337260 | Msa0465080:intron | 50.0% | |
TGTTAGTGTATGGACCCCTG+AGG | - | chr3_3:65337452-65337471 | Msa0465080:CDS | 50.0% | |
CTTTGCAGACAGAAAGCCAG+TGG | - | chr3_3:65337736-65337755 | Msa0465080:CDS | 50.0% | |
CAGAAAGCCAGTGGAATTGG+TGG | - | chr3_3:65337745-65337764 | Msa0465080:CDS | 50.0% | |
!! | GTCTTGTTGGTGTTAGGCAC+CGG | + | chr3_3:65338090-65338109 | None:intergenic | 50.0% |
! | GACCATGGCATGAAAGCACA+TGG | - | chr3_3:65338237-65338256 | Msa0465080:CDS | 50.0% |
CACCATGTGCTTTCATGCCA+TGG | + | chr3_3:65338242-65338261 | None:intergenic | 50.0% | |
! | GGCATGAAAGCACATGGTGA+TGG | - | chr3_3:65338243-65338262 | Msa0465080:CDS | 50.0% |
GCAACTTCGATTGAGCAGAC+TGG | + | chr3_3:65338693-65338712 | None:intergenic | 50.0% | |
CGACCCTGCATTAGAAGTCA+TGG | + | chr3_3:65339155-65339174 | None:intergenic | 50.0% | |
GCCAAGACGCAAGATGAAGA+AGG | - | chr3_3:65339359-65339378 | Msa0465080:intron | 50.0% | |
TTTCATTCGGTTCTGCCTCC+AGG | - | chr3_3:65339411-65339430 | Msa0465080:intron | 50.0% | |
TGGAGACGTAGACACAGTTG+AGG | - | chr3_3:65340226-65340245 | Msa0465080:intron | 50.0% | |
GGAGACGTAGACACAGTTGA+GGG | - | chr3_3:65340227-65340246 | Msa0465080:intron | 50.0% | |
GGTGAGGTACGGATTCCTGT+TGG | - | chr3_3:65334575-65334594 | Msa0465080:intron | 55.0% | |
GGTACGGATTCCTGTTGGTG+AGG | - | chr3_3:65334580-65334599 | Msa0465080:intron | 55.0% | |
! | CGGATTCCTGTTGGTGAGGT+TGG | - | chr3_3:65334584-65334603 | Msa0465080:intron | 55.0% |
TGTAGAATGCCTGGCGCAAC+TGG | - | chr3_3:65335169-65335188 | Msa0465080:intron | 55.0% | |
AAGGTCACGGGTTCAAGTCC+TGG | - | chr3_3:65335215-65335234 | Msa0465080:intron | 55.0% | |
GGCTTAGGCCTTACAAAGCC+CGG | + | chr3_3:65335308-65335327 | None:intergenic | 55.0% | |
GCCTATTAAGCCCATCAGGC+CGG | + | chr3_3:65335686-65335705 | None:intergenic | 55.0% | |
TAAACGAGCTAGGCCGAGCT+AGG | - | chr3_3:65335778-65335797 | Msa0465080:intron | 55.0% | |
ATGCGGGAGCTCTATTGCAC+CGG | - | chr3_3:65335935-65335954 | Msa0465080:CDS | 55.0% | |
ATGCGGGAGCTCTATTGCAC+TGG | - | chr3_3:65335935-65335954 | Msa0465080:CDS | 55.0% | |
TGCGGGAGCTCTATTGCACT+GGG | - | chr3_3:65336027-65336046 | Msa0465080:CDS | 55.0% | |
!! | TGCAAGAAGGGGATTGGTCC+TGG | - | chr3_3:65337298-65337317 | Msa0465080:intron | 55.0% |
TGGACCCCTGAGGTTCCTTA+TGG | - | chr3_3:65337462-65337481 | Msa0465080:CDS | 55.0% | |
GGACCCCTGAGGTTCCTTAT+GGG | - | chr3_3:65337463-65337482 | Msa0465080:CDS | 55.0% | |
! | AAGCCAGTGGAATTGGTGGC+AGG | - | chr3_3:65337749-65337768 | Msa0465080:CDS | 55.0% |
TTGCCTGCCACCAATTCCAC+TGG | + | chr3_3:65337755-65337774 | None:intergenic | 55.0% | |
GGTGTGGTCCAAGTCAACCT+CGG | - | chr3_3:65337847-65337866 | Msa0465080:CDS | 55.0% | |
GTGTGGTCCAAGTCAACCTC+GGG | - | chr3_3:65337848-65337867 | Msa0465080:CDS | 55.0% | |
TGTGGTCCAAGTCAACCTCG+GGG | - | chr3_3:65337849-65337868 | Msa0465080:CDS | 55.0% | |
CTCGGGGGTTGGAGTTTAGA+GGG | - | chr3_3:65337865-65337884 | Msa0465080:CDS | 55.0% | |
CGGACAGCAGACATAGAGAC+CGG | + | chr3_3:65338136-65338155 | None:intergenic | 55.0% | |
GACATGTGGGTCGTGCTTGA+AGG | - | chr3_3:65338658-65338677 | Msa0465080:intron | 55.0% | |
!! | GAGGACGAGGTATCGATGCA+AGG | - | chr3_3:65339330-65339349 | Msa0465080:intron | 55.0% |
!! | CGAGGTATCGATGCAAGGCA+CGG | - | chr3_3:65339335-65339354 | Msa0465080:intron | 55.0% |
TCTACGTCTCCAACTGCAGC+TGG | + | chr3_3:65340218-65340237 | None:intergenic | 55.0% | |
!! | GGGTGGAAATGGGCTAGGCT+GGG | - | chr3_3:65335282-65335301 | Msa0465080:intron | 60.0% |
!! | CCTATGACGGGTAACAGGCC+AGG | + | chr3_3:65335360-65335379 | None:intergenic | 60.0% |
CCTGGCCTGTTACCCGTCAT+AGG | - | chr3_3:65335357-65335376 | Msa0465080:intron | 60.0% | |
!! | CTCATTTTCGAGGCCTGGCC+TGG | - | chr3_3:65335380-65335399 | Msa0465080:intron | 60.0% |
!! | GCCGGCCTGATGGGCTTAAT+AGG | - | chr3_3:65335682-65335701 | Msa0465080:intron | 60.0% |
GCTAGGCTGTAGGCCTCTGT+CGG | - | chr3_3:65335811-65335830 | Msa0465080:intron | 60.0% | |
! | CAAATGGTGGGACCCCTTCC+CGG | - | chr3_3:65335903-65335922 | Msa0465080:intron | 60.0% |
CATATGCAGGGTCCGGGAAG+GGG | + | chr3_3:65335918-65335937 | None:intergenic | 60.0% | |
GCATATGCAGGGTCCGGGAA+GGG | + | chr3_3:65335919-65335938 | None:intergenic | 60.0% | |
CTTCCCGGACCCTGCATATG+CGG | - | chr3_3:65335918-65335937 | Msa0465080:CDS | 60.0% | |
TTCCCGGACCCTGCATATGC+GGG | - | chr3_3:65335919-65335938 | Msa0465080:CDS | 60.0% | |
TGCGGGAGCTCTATTGCACC+GGG | - | chr3_3:65335936-65335955 | Msa0465080:CDS | 60.0% | |
! | TGCACCGGGTTGCCCTTTTG+TGG | - | chr3_3:65335981-65336000 | Msa0465080:CDS | 60.0% |
! | GCACCGGGTTGCCCTTTTGT+GGG | - | chr3_3:65335982-65336001 | Msa0465080:CDS | 60.0% |
GGTCCCACAAAAGGGCAACC+CGG | + | chr3_3:65335988-65336007 | None:intergenic | 60.0% | |
CGGGAAGGGGTCCCACAAAA+GGG | + | chr3_3:65335996-65336015 | None:intergenic | 60.0% | |
! | CCTTTTGTGGGACCCCTTCC+CGG | - | chr3_3:65335994-65336013 | Msa0465080:CDS | 60.0% |
CATATGCAGGGTCCGGGAAG+GGG | + | chr3_3:65335918-65335937 | None:intergenic | 60.0% | |
GCATATGCAGGGTCCGGGAA+GGG | + | chr3_3:65335919-65335938 | None:intergenic | 60.0% | |
CTTCCCGGACCCTGCATATG+CGG | - | chr3_3:65335918-65335937 | Msa0465080:CDS | 60.0% | |
TTCCCGGACCCTGCATATGC+GGG | - | chr3_3:65335919-65335938 | Msa0465080:CDS | 60.0% | |
GTGGTCCAAGTCAACCTCGG+GGG | - | chr3_3:65337850-65337869 | Msa0465080:CDS | 60.0% | |
TCCAAGTCAACCTCGGGGGT+TGG | - | chr3_3:65337854-65337873 | Msa0465080:CDS | 60.0% | |
TCCAACCCCCGAGGTTGACT+TGG | + | chr3_3:65337858-65337877 | None:intergenic | 60.0% | |
CCTCTAAACTCCAACCCCCG+AGG | + | chr3_3:65337867-65337886 | None:intergenic | 60.0% | |
CCTCGGGGGTTGGAGTTTAG+AGG | - | chr3_3:65337864-65337883 | Msa0465080:CDS | 60.0% | |
GGGGGCTGACCTAGTCTCAT+TGG | - | chr3_3:65338293-65338312 | Msa0465080:CDS | 60.0% | |
AGCCACTCTCCAGCTGCAGT+TGG | - | chr3_3:65340206-65340225 | Msa0465080:intron | 60.0% | |
CTCCAACTGCAGCTGGAGAG+TGG | + | chr3_3:65340211-65340230 | None:intergenic | 60.0% | |
!! | GGGGTGGAAATGGGCTAGGC+TGG | - | chr3_3:65335281-65335300 | Msa0465080:intron | 65.0% |
!! | GGAAATGGGCTAGGCTGGGC+CGG | - | chr3_3:65335286-65335305 | Msa0465080:intron | 65.0% |
!! | GAAATGGGCTAGGCTGGGCC+GGG | - | chr3_3:65335287-65335306 | Msa0465080:intron | 65.0% |
! | AGGCTGGGCCGGGCTTTGTA+AGG | - | chr3_3:65335297-65335316 | Msa0465080:intron | 65.0% |
ACGGGTAACAGGCCAGGCTC+AGG | + | chr3_3:65335354-65335373 | None:intergenic | 65.0% | |
GGCTGTAGGCCTCTGTCGGA+CGG | - | chr3_3:65335815-65335834 | Msa0465080:intron | 65.0% | |
TAGGCCTCTGTCGGACGGTC+TGG | - | chr3_3:65335820-65335839 | Msa0465080:intron | 65.0% | |
TAGGCCAGACCGTCCGACAG+AGG | + | chr3_3:65335827-65335846 | None:intergenic | 65.0% | |
CGGGAAGGGGTCCCACCATT+TGG | + | chr3_3:65335905-65335924 | None:intergenic | 65.0% | |
CGCATATGCAGGGTCCGGGA+AGG | + | chr3_3:65335920-65335939 | None:intergenic | 65.0% | |
CTCCCGCATATGCAGGGTCC+GGG | + | chr3_3:65335924-65335943 | None:intergenic | 65.0% | |
GCTCCCGCATATGCAGGGTC+CGG | + | chr3_3:65335925-65335944 | None:intergenic | 65.0% | |
GCGGGAGCTCTATTGCACCG+GGG | - | chr3_3:65335937-65335956 | Msa0465080:CDS | 65.0% | |
CCGGGAAGGGGTCCCACAAA+AGG | + | chr3_3:65335997-65336016 | None:intergenic | 65.0% | |
CGCATATGCAGGGTCCGGGA+AGG | + | chr3_3:65335920-65335939 | None:intergenic | 65.0% | |
CTCCCGCATATGCAGGGTCC+GGG | + | chr3_3:65335924-65335943 | None:intergenic | 65.0% | |
GCTCCCGCATATGCAGGGTC+CGG | + | chr3_3:65335925-65335944 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_3 | gene | 65334341 | 65340979 | 65334341 | ID=Msa0465080;Name=Msa0465080 |
chr3_3 | mRNA | 65334341 | 65340979 | 65334341 | ID=Msa0465080-mRNA-1;Parent=Msa0465080;Name=Msa0465080-mRNA-1;_AED=0.09;_eAED=0.10;_QI=0|0.12|0|1|1|1|9|0|901 |
chr3_3 | exon | 65340625 | 65340979 | 65340625 | ID=Msa0465080-mRNA-1:exon:14541;Parent=Msa0465080-mRNA-1 |
chr3_3 | exon | 65337396 | 65338520 | 65337396 | ID=Msa0465080-mRNA-1:exon:14540;Parent=Msa0465080-mRNA-1 |
chr3_3 | exon | 65336906 | 65337088 | 65336906 | ID=Msa0465080-mRNA-1:exon:14539;Parent=Msa0465080-mRNA-1 |
chr3_3 | exon | 65336737 | 65336804 | 65336737 | ID=Msa0465080-mRNA-1:exon:14538;Parent=Msa0465080-mRNA-1 |
chr3_3 | exon | 65336265 | 65336381 | 65336265 | ID=Msa0465080-mRNA-1:exon:14537;Parent=Msa0465080-mRNA-1 |
chr3_3 | exon | 65335918 | 65336150 | 65335918 | ID=Msa0465080-mRNA-1:exon:14536;Parent=Msa0465080-mRNA-1 |
chr3_3 | exon | 65335488 | 65335635 | 65335488 | ID=Msa0465080-mRNA-1:exon:14535;Parent=Msa0465080-mRNA-1 |
chr3_3 | exon | 65334640 | 65334906 | 65334640 | ID=Msa0465080-mRNA-1:exon:14534;Parent=Msa0465080-mRNA-1 |
chr3_3 | exon | 65334341 | 65334550 | 65334341 | ID=Msa0465080-mRNA-1:exon:14533;Parent=Msa0465080-mRNA-1 |
chr3_3 | CDS | 65340625 | 65340979 | 65340625 | ID=Msa0465080-mRNA-1:cds;Parent=Msa0465080-mRNA-1 |
chr3_3 | CDS | 65337396 | 65338520 | 65337396 | ID=Msa0465080-mRNA-1:cds;Parent=Msa0465080-mRNA-1 |
chr3_3 | CDS | 65336906 | 65337088 | 65336906 | ID=Msa0465080-mRNA-1:cds;Parent=Msa0465080-mRNA-1 |
chr3_3 | CDS | 65336737 | 65336804 | 65336737 | ID=Msa0465080-mRNA-1:cds;Parent=Msa0465080-mRNA-1 |
chr3_3 | CDS | 65336265 | 65336381 | 65336265 | ID=Msa0465080-mRNA-1:cds;Parent=Msa0465080-mRNA-1 |
chr3_3 | CDS | 65335918 | 65336150 | 65335918 | ID=Msa0465080-mRNA-1:cds;Parent=Msa0465080-mRNA-1 |
chr3_3 | CDS | 65335488 | 65335635 | 65335488 | ID=Msa0465080-mRNA-1:cds;Parent=Msa0465080-mRNA-1 |
chr3_3 | CDS | 65334640 | 65334906 | 65334640 | ID=Msa0465080-mRNA-1:cds;Parent=Msa0465080-mRNA-1 |
chr3_3 | CDS | 65334341 | 65334550 | 65334341 | ID=Msa0465080-mRNA-1:cds;Parent=Msa0465080-mRNA-1 |
Gene Sequence |
Protein sequence |