AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0510780


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0510780 MtrunA17_Chr3g0117001 90.049 1015 40 4 1 955 1 1014 0.0 1860
Msa0510780 MtrunA17_Chr2g0290721 46.169 1031 457 16 4 947 2 1021 0.0 875
Msa0510780 MtrunA17_Chr4g0076511 45.005 1031 468 20 4 947 2 1020 0.0 823
Msa0510780 MtrunA17_Chr4g0045581 20.939 511 326 18 498 946 74 568 9.41e-21 97.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0510780 AT5G50170.1 49.314 1020 435 17 4 945 2 1017 0.0 964
Msa0510780 AT1G03370.1 45.841 1034 462 19 4 955 2 1019 0.0 859
Msa0510780 AT1G03370.2 48.267 808 343 14 4 749 2 796 0.0 721

Find 192 sgRNAs with CRISPR-Local

Find 503 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTACTTGCTCAGAGGTTTA+AGG 0.117652 3_4:-59945563 Msa0510780:CDS
ATTTCTTTCTGCAAGGGTTC+TGG 0.157779 3_4:-59944052 Msa0510780:CDS
CTGACACATGCCTGTTAAAT+TGG 0.188888 3_4:+59942682 None:intergenic
TACAATTTCTCTTCATTATA+AGG 0.192020 3_4:-59946418 Msa0510780:CDS
GAGGCAACCCAAACAATTTC+TGG 0.206916 3_4:+59944256 None:intergenic
CTTTCATCATTGTGCTTTGT+AGG 0.238651 3_4:+59945644 None:intergenic
TGATCTTGTTTGTCCATTAC+AGG 0.255725 3_4:+59944879 None:intergenic
TCCTTATGGGAATTCATTTC+GGG 0.256504 3_4:-59945755 Msa0510780:CDS
TGATTGATGGTTACCTTAAT+TGG 0.265899 3_4:+59943406 None:intergenic
AAACTCAACTGCTTCAATTA+AGG 0.266631 3_4:-59946361 Msa0510780:CDS
TTCCTTATGGGAATTCATTT+CGG 0.268510 3_4:-59945756 Msa0510780:CDS
TGTAATTTGTTCTTTCTGAT+AGG 0.271011 3_4:+59943528 None:intergenic
CTCTGCTGAACTACCAATTA+AGG 0.276365 3_4:-59943419 Msa0510780:intron
TCTACATTCCAGAAATTGTT+TGG 0.291905 3_4:-59944264 Msa0510780:CDS
CTTCCTTCAGTGTTTGTGTT+TGG 0.296689 3_4:+59942627 None:intergenic
ATCTTTCCTAAACTGAGAAT+TGG 0.299105 3_4:+59945984 None:intergenic
GAAGAGAAAATTGCATTTAC+AGG 0.299291 3_4:-59944196 Msa0510780:intron
ATGAAAGGTGTGATAGAAAA+TGG 0.304619 3_4:-59945628 Msa0510780:CDS
ATTCTGTTGATGTATGCTTT+AGG 0.312579 3_4:+59944600 None:intergenic
TGGACCCCTGAGGTTCCTTA+TGG 0.312969 3_4:-59945769 Msa0510780:CDS
TTTCTTTCTGCAAGGGTTCT+GGG 0.313222 3_4:-59944051 Msa0510780:CDS
GGCAGGCAATTACATACTTC+TGG 0.318091 3_4:-59945465 Msa0510780:CDS
TCGTCCTCTTCGAAGAATTA+TGG 0.326116 3_4:+59943915 None:intergenic
GATAAACAAAGAACATTTGC+TGG 0.331980 3_4:-59945521 Msa0510780:CDS
TTAATTGAAGCAGTTGAGTT+TGG 0.338297 3_4:+59946363 None:intergenic
GTAATTTGTTCTTTCTGATA+GGG 0.342312 3_4:+59943529 None:intergenic
TCGCGCCCAATTCTCAGTTT+AGG 0.348773 3_4:-59945990 Msa0510780:CDS
TCATTGATTAGAAATTCTTC+TGG 0.353289 3_4:+59944234 None:intergenic
AGACATATCTTCATCTTTCC+AGG 0.360057 3_4:+59945915 None:intergenic
TAGGTACGAAATTGAGAAAT+CGG 0.362527 3_4:-59942452 Msa0510780:CDS
CGGATTCCTGTTGGTGAGGT+TGG 0.366375 3_4:-59948641 Msa0510780:CDS
ACTAGTTCTCCTAAGCTATC+TGG 0.370900 3_4:+59945334 None:intergenic
ATGTTACGTACCAATTTAAC+AGG 0.378460 3_4:-59942692 Msa0510780:CDS
CCTCCATCATTAGCATCATT+AGG 0.379450 3_4:-59943952 Msa0510780:CDS
CTAGTCTCATTGGAGTCAAC+AGG 0.382626 3_4:-59944928 Msa0510780:CDS
TGAAGAAGGCATTGCACTAA+TGG 0.390731 3_4:-59946115 Msa0510780:CDS
ACACGGAAGTGATCAGAAAA+TGG 0.390903 3_4:+59942570 None:intergenic
TATGAAAAGAACTGGTTGTA+TGG 0.391972 3_4:-59942766 Msa0510780:CDS
TCCTTCTTCATCTTGCGTCT+TGG 0.391985 3_4:+59943870 None:intergenic
CCTCACATCTTGTGATATCA+TGG 0.394079 3_4:-59945678 Msa0510780:CDS
TAGGATAGATCCAGAGTCTT+CGG 0.396595 3_4:+59943471 None:intergenic
AGCAAATATTGCCACCTACT+TGG 0.399405 3_4:-59948604 Msa0510780:CDS
AAAGCATACATCAACAGAAT+TGG 0.403641 3_4:-59944597 Msa0510780:CDS
AGACAGAAAGCCAGTGGAAT+TGG 0.405883 3_4:-59945489 Msa0510780:CDS
CTACATTCCAGAAATTGTTT+GGG 0.410876 3_4:-59944263 Msa0510780:CDS
GATATTAGAGTTTGATGCTA+TGG 0.411267 3_4:-59944714 Msa0510780:CDS
TGCAAGAAGGGGATTGGTCC+TGG 0.412225 3_4:-59945933 Msa0510780:CDS
AGAAAGTCCTGAAAATTTGC+AGG 0.414312 3_4:-59946073 Msa0510780:CDS
TTGATGTACTTGTTAGTGTA+TGG 0.415153 3_4:-59945789 Msa0510780:CDS
AACAAACTCCTCGTTCCAAA+TGG 0.415882 3_4:+59948760 None:intergenic
GTTACTGTAGCTTTAATTGA+GGG 0.416589 3_4:-59944958 Msa0510780:CDS
GAAACACGTTCAATCCCATT+TGG 0.417583 3_4:-59948775 Msa0510780:CDS
AGCTGCTTCAAAATTAGTTA+AGG 0.421735 3_4:-59945863 Msa0510780:CDS
AGATGAAATGTGAGGACGTT+CGG 0.425919 3_4:+59946326 None:intergenic
AGGATAGATCCAGAGTCTTC+GGG 0.430269 3_4:+59943472 None:intergenic
GGACCCCTGAGGTTCCTTAT+GGG 0.435476 3_4:-59945768 Msa0510780:CDS
TCTTTCCTAAACTGAGAATT+GGG 0.440200 3_4:+59945985 None:intergenic
GCATGAAGATCAAGAGGTCT+TGG 0.441294 3_4:-59943500 Msa0510780:CDS
ATCTTTAGTCACTCTAATAT+AGG 0.442217 3_4:+59945816 None:intergenic
AGTGAAACATCCTGGTCAAA+TGG 0.443287 3_4:+59944644 None:intergenic
CATAAGATTATGAAAAGAAC+TGG 0.445701 3_4:-59942774 Msa0510780:CDS
AGTTTCAGCAAAGGATCAAC+AGG 0.445721 3_4:-59942366 Msa0510780:CDS
ACATGCCTTTCGAGTACATC+AGG 0.447487 3_4:+59942711 None:intergenic
ATTCTTTACAAGATAATGCC+TGG 0.450825 3_4:-59945727 Msa0510780:CDS
TGTTACTGTAGCTTTAATTG+AGG 0.451394 3_4:-59944959 Msa0510780:CDS
TATAATGAAGAGAAATTGTA+AGG 0.453242 3_4:+59946421 None:intergenic
ACATTGGCATTATGTGGCTT+AGG 0.455616 3_4:-59942396 Msa0510780:CDS
TCAAAACCAACCTCACCAAC+AGG 0.461903 3_4:+59948635 None:intergenic
GAATTCCCATAAGGAACCTC+AGG 0.462673 3_4:+59945763 None:intergenic
GTAGAATTCCTTTGAGGTGA+TGG 0.464547 3_4:+59944282 None:intergenic
GTCGGCTATTTCTTTCTGCA+AGG 0.469677 3_4:-59944059 Msa0510780:CDS
ACCCGAAATGAATTCCCATA+AGG 0.470288 3_4:+59945754 None:intergenic
GAGCAAGTAGGTTAGCAAAC+TGG 0.472357 3_4:+59945575 None:intergenic
TGAAAGGTGTGATAGAAAAT+GGG 0.473199 3_4:-59945627 Msa0510780:CDS
ATCCAAGTTTAAAATTCGAC+TGG 0.474960 3_4:-59942335 Msa0510780:CDS
GTGTGGTCCAAGTCAACCTC+GGG 0.476221 3_4:-59945383 Msa0510780:CDS
CTTCAATGTTCTAACAAGAA+TGG 0.478900 3_4:-59948575 Msa0510780:CDS
CGAAGAATTATGGCCAATGT+AGG 0.482857 3_4:+59943925 None:intergenic
TTGGTAATGCCCGAAGACTC+TGG 0.484116 3_4:-59943481 Msa0510780:CDS
GTTTAAGGTGCTAGATAAGG+AGG 0.484599 3_4:-59945548 Msa0510780:CDS
TCTCGTGTGAAGCTTAAACT+TGG 0.484866 3_4:-59948827 Msa0510780:CDS
TGGAATGTAGAATTCCTTTG+AGG 0.485098 3_4:+59944276 None:intergenic
CAAATTTGCAAGAAGGGGAT+TGG 0.487087 3_4:-59945939 Msa0510780:CDS
GACATGTGGGTCGTGCTTGA+AGG 0.487724 3_4:-59944572 Msa0510780:CDS
TAATTTGTTCTTTCTGATAG+GGG 0.487805 3_4:+59943530 None:intergenic
GCAACTTCGATTGAGCAGAC+TGG 0.488529 3_4:+59944540 None:intergenic
CTTCCTAATGATGCTAATGA+TGG 0.493959 3_4:+59943949 None:intergenic
TGGGGCTAAACAAGGTTTGA+AGG 0.495842 3_4:-59945608 Msa0510780:CDS
CACCATGTGCTTTCATGCCA+TGG 0.504412 3_4:+59944992 None:intergenic
TACTGTAGCTTTAATTGAGG+GGG 0.506096 3_4:-59944956 Msa0510780:CDS
GGACAACAAATTTGCAAGAA+GGG 0.506318 3_4:-59945945 Msa0510780:CDS
TAGTGATGAATCAAAGGTAG+TGG 0.506625 3_4:-59948681 Msa0510780:CDS
ACAAACTCCTCGTTCCAAAT+GGG 0.506973 3_4:+59948761 None:intergenic
GGACTATGACACTACACCTT+GGG 0.509537 3_4:-59942745 Msa0510780:CDS
CTCAGAAATCGCATGTGTAA+AGG 0.509630 3_4:-59942270 None:intergenic
GAGGTTTAAGGTGCTAGATA+AGG 0.516605 3_4:-59945551 Msa0510780:CDS
TCGGCTATTTCTTTCTGCAA+GGG 0.519816 3_4:-59944058 Msa0510780:CDS
TTACAGGTGAAAACCACATA+AGG 0.523041 3_4:+59944895 None:intergenic
GAAATTGAGAAATCGGCTCT+TGG 0.524528 3_4:-59942445 Msa0510780:CDS
TGAAGGCAAACAGTTGTTGA+AGG 0.524534 3_4:-59946271 Msa0510780:CDS
CAGAAAGCCAGTGGAATTGG+TGG 0.526703 3_4:-59945486 Msa0510780:CDS
ATGTATACATTGGCATTATG+TGG 0.530719 3_4:-59942402 Msa0510780:CDS
TTGCCTGCCACCAATTCCAC+TGG 0.534344 3_4:+59945479 None:intergenic
CTCACATCTTGTGATATCAT+GGG 0.534647 3_4:-59945677 Msa0510780:CDS
ATGCCTTCTTCAAAACTACA+AGG 0.535807 3_4:+59946126 None:intergenic
ATTGAACTGCCAGATAGCTT+AGG 0.537298 3_4:-59945343 Msa0510780:CDS
TGATGTTTCTGAACAATCCA+CGG 0.537679 3_4:+59946194 None:intergenic
TCTTGTGATATCATGGGGAA+TGG 0.537854 3_4:-59945671 Msa0510780:CDS
CAACTTCGATTGAGCAGACT+GGG 0.538317 3_4:+59944541 None:intergenic
TGCACAGGTAAGTTCAGTGA+TGG 0.538622 3_4:-59942823 Msa0510780:intron
TTTGACCAGGATGTTTCACT+TGG 0.539474 3_4:-59944641 Msa0510780:CDS
AAGCCAGTGGAATTGGTGGC+AGG 0.542795 3_4:-59945482 Msa0510780:CDS
CAGAAAATGGAACGCCATTG+AGG 0.542984 3_4:+59942583 None:intergenic
GGGACAACAAATTTGCAAGA+AGG 0.545965 3_4:-59945946 Msa0510780:CDS
GAAGAATTATGGCCAATGTA+GGG 0.546603 3_4:+59943926 None:intergenic
CTGTTGACTCCAATGAGACT+AGG 0.548291 3_4:+59944929 None:intergenic
AGGGTTGTCAGATCCTTATG+TGG 0.551722 3_4:-59944908 Msa0510780:CDS
TTATCGCTAATCGCATAGAA+AGG 0.553560 3_4:-59946248 Msa0510780:CDS
TTGAGACATCAGATCCTCAA+TGG 0.556417 3_4:-59944843 Msa0510780:CDS
AGAAGAGCATGAAGATCAAG+AGG 0.557385 3_4:-59943506 Msa0510780:CDS
TGAAAGCACATGGTGATGGA+TGG 0.558432 3_4:-59944984 Msa0510780:CDS
TTGATTAGAAATTCTTCTGG+AGG 0.561650 3_4:+59944237 None:intergenic
TTACTGTAGCTTTAATTGAG+GGG 0.563678 3_4:-59944957 Msa0510780:CDS
GGCATGAAAGCACATGGTGA+TGG 0.566627 3_4:-59944988 Msa0510780:CDS
ATCATTAGGAAGCCCTACAT+TGG 0.568432 3_4:-59943938 Msa0510780:CDS
AACAGAATTGGCAGACATGT+GGG 0.569445 3_4:-59944585 Msa0510780:CDS
GCCTTCTTCAAAACTACAAG+GGG 0.570452 3_4:+59946128 None:intergenic
ACACAAGACAAATCTTCTCC+AGG 0.571230 3_4:+59945709 None:intergenic
CAACAGAATTGGCAGACATG+TGG 0.573435 3_4:-59944586 Msa0510780:CDS
TCATCATAGTGATGAATCAA+AGG 0.575054 3_4:-59948687 Msa0510780:CDS
TCAATCTTCCATCACCTCAA+AGG 0.575235 3_4:-59944290 Msa0510780:CDS
CATGTCCAAGTGAAACATCC+TGG 0.575676 3_4:+59944636 None:intergenic
TAGTTCAGCAGAGTAAATCC+TGG 0.576814 3_4:+59943429 None:intergenic
ACATCAGATCCTCAATGGAA+TGG 0.576877 3_4:-59944838 Msa0510780:intron
GACAACAAATTTGCAAGAAG+GGG 0.580466 3_4:-59945944 Msa0510780:CDS
AAGATGAAGAAGGAAGGCTT+AGG 0.581766 3_4:-59943861 Msa0510780:CDS
CTACAAAGCACAATGATGAA+AGG 0.583931 3_4:-59945643 Msa0510780:CDS
ACTTCCACATACAAAACTGA+TGG 0.585002 3_4:+59944683 None:intergenic
TGGATCTATCCTAGAAGATG+AGG 0.587308 3_4:-59943461 Msa0510780:CDS
GCCAAGACGCAAGATGAAGA+AGG 0.588150 3_4:-59943871 Msa0510780:CDS
AGAAGATTTGTCTTGTGTAG+AGG 0.589987 3_4:-59945704 Msa0510780:CDS
TGGACTATGACACTACACCT+TGG 0.591215 3_4:-59942746 Msa0510780:CDS
CCTAATGATGCTAATGATGG+AGG 0.596932 3_4:+59943952 None:intergenic
AAAGATTTAGCAGAACTACA+AGG 0.597502 3_4:-59945967 Msa0510780:CDS
ATAATTCTTCGAAGAGGACG+AGG 0.598967 3_4:-59943913 Msa0510780:CDS
TAAGGTGAAGGATATTGCTG+AGG 0.601117 3_4:-59948735 Msa0510780:CDS
AATATAGGTCTGTTCTTCAG+TGG 0.605361 3_4:+59945831 None:intergenic
GGAGCTCTAAGTTTCAGCAA+AGG 0.606303 3_4:-59942375 Msa0510780:CDS
CCTTAAACCTCTGAGCAAGT+AGG 0.607128 3_4:+59945563 None:intergenic
ATAGAAAATGGGGCTAAACA+AGG 0.607329 3_4:-59945616 Msa0510780:CDS
AGTGATGAATCAAAGGTAGT+GGG 0.608098 3_4:-59948680 Msa0510780:CDS
GAAAGCACATGGTGATGGAT+GGG 0.612846 3_4:-59944983 Msa0510780:CDS
CATTGAAGCTCGAACCAAGT+AGG 0.613844 3_4:+59948590 None:intergenic
AATGAAGTTATGATCCTCAA+TGG 0.614816 3_4:-59942597 Msa0510780:CDS
TATCCAAACACAAACACTGA+AGG 0.619398 3_4:-59942630 Msa0510780:CDS
TGCCTTCTTCAAAACTACAA+GGG 0.619857 3_4:+59946127 None:intergenic
GGTGAGGCACGGATTCCTGT+TGG 0.624800 3_4:-59948650 Msa0510780:CDS
AGAACGAAACTCAAAATCCG+TGG 0.625265 3_4:-59946211 Msa0510780:CDS
TCCACATACAAAACTGATGG+TGG 0.625286 3_4:+59944686 None:intergenic
AGACGCAAGATGAAGAAGGA+AGG 0.627033 3_4:-59943867 Msa0510780:CDS
CGAGGTATCGATGCAAGGCA+CGG 0.630444 3_4:-59943895 Msa0510780:CDS
TTGCTAACCTACTTGCTCAG+AGG 0.631684 3_4:-59945570 Msa0510780:CDS
GAAAGTCCTGAAAATTTGCA+GGG 0.631919 3_4:-59946072 Msa0510780:CDS
AATTCCCATAAGGAACCTCA+GGG 0.632610 3_4:+59945764 None:intergenic
CAAACACAAACACTGAAGGA+AGG 0.633299 3_4:-59942626 Msa0510780:CDS
GGTGTGGTCCAAGTCAACCT+CGG 0.633718 3_4:-59945384 Msa0510780:CDS
GAAAGTTTAAATACAAGACA+AGG 0.635240 3_4:-59948805 Msa0510780:CDS
GGCACGGATTCCTGTTGGTG+AGG 0.637030 3_4:-59948645 Msa0510780:CDS
GAGGACGAGGTATCGATGCA+AGG 0.637951 3_4:-59943900 Msa0510780:CDS
TAAAACCTGATGTACTCGAA+AGG 0.640491 3_4:-59942716 Msa0510780:CDS
TGTTATCAATATCTTCCCAA+AGG 0.641831 3_4:+59943986 None:intergenic
CCATGATATCACAAGATGTG+AGG 0.647215 3_4:+59945678 None:intergenic
CTTCTAATAGGAACTGACCA+TGG 0.647931 3_4:-59945009 Msa0510780:intron
AAGATTTAGCAGAACTACAA+GGG 0.650173 3_4:-59945966 Msa0510780:CDS
GTTCAATCCCATTTGGAACG+AGG 0.651678 3_4:-59948768 Msa0510780:CDS
GAAAGGTGTGATAGAAAATG+GGG 0.653678 3_4:-59945626 Msa0510780:CDS
TCACATCTTGTGATATCATG+GGG 0.656320 3_4:-59945676 Msa0510780:CDS
AAGGACAAACCATTCCATTG+AGG 0.656530 3_4:+59944829 None:intergenic
CTTTGCAGACAGAAAGCCAG+TGG 0.659478 3_4:-59945495 Msa0510780:CDS
TTGGCCATAATTCTTCGAAG+AGG 0.663350 3_4:-59943919 Msa0510780:CDS
TAGTCTCATTGGAGTCAACA+GGG 0.666827 3_4:-59944927 Msa0510780:CDS
TATGATTCATAAAAGAAACA+TGG 0.676075 3_4:+59946394 None:intergenic
TGAAGCTCGAACCAAGTAGG+TGG 0.684082 3_4:+59948593 None:intergenic
TGCAAGTGTGATGTATACAT+TGG 0.693705 3_4:-59942412 Msa0510780:CDS
GACCATGGCATGAAAGCACA+TGG 0.699877 3_4:-59944994 Msa0510780:CDS
GTGGTCCAAGTCAACCTCGG+GGG 0.700429 3_4:-59945381 Msa0510780:CDS
TGTTAGTGTATGGACCCCTG+AGG 0.705739 3_4:-59945779 Msa0510780:CDS
AATTGATGAGATGAAATGTG+AGG 0.715068 3_4:+59946318 None:intergenic
TGTGGTCCAAGTCAACCTCG+GGG 0.726685 3_4:-59945382 Msa0510780:CDS
AGTCCTGAAAATTTGCAGGG+CGG 0.751620 3_4:-59946069 Msa0510780:CDS
CCTTCTTCAAAACTACAAGG+GGG 0.754878 3_4:+59946129 None:intergenic
ATTCCCATAAGGAACCTCAG+GGG 0.815311 3_4:+59945765 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATATATGAAAAACTTAAT+AGG - chr3_4:59943586-59943605 Msa0510780:intron 10.0%
!!! ATTTTATTTTTTTTCTTTGT+TGG - chr3_4:59944376-59944395 Msa0510780:intron 10.0%
!!! ATCAATTTTTTGATAAAAAT+CGG - chr3_4:59944855-59944874 Msa0510780:CDS 10.0%
!!! AAATTTTTCAACAAATTTTG+TGG - chr3_4:59942606-59942625 Msa0510780:CDS 15.0%
!! CAATTAACATACTAATATTT+AGG + chr3_4:59942717-59942736 None:intergenic 15.0%
!! CAATAAATATTTACTATTTG+TGG + chr3_4:59942793-59942812 None:intergenic 15.0%
!!! ATTTATCACAATTTTGAAAA+TGG + chr3_4:59942824-59942843 None:intergenic 15.0%
!! TAAGGAATTAAATAAGTTAA+AGG + chr3_4:59942974-59942993 None:intergenic 15.0%
!! TAAATAATGAATTCATATGA+AGG - chr3_4:59943465-59943484 Msa0510780:CDS 15.0%
!! AACTTCAAAAATATCAATAA+TGG - chr3_4:59943555-59943574 Msa0510780:intron 15.0%
!! CATTCTACAATTATAAAAAA+GGG + chr3_4:59944012-59944031 None:intergenic 15.0%
!! CATTCTACAATTATAAAAAA+GGG + chr3_4:59944012-59944031 None:intergenic 15.0%
!! TTCAAGAAATAAAAAAAGTA+TGG + chr3_4:59944645-59944664 None:intergenic 15.0%
!! ATATAAACACATAAAAAATG+TGG + chr3_4:59945734-59945753 None:intergenic 15.0%
!!! TTTTGACTTGATATTTAAAT+TGG + chr3_4:59947850-59947869 None:intergenic 15.0%
!! ATATTAGTATGTTAATTGCT+AGG - chr3_4:59942719-59942738 Msa0510780:CDS 20.0%
!! TATTAGTATGTTAATTGCTA+GGG - chr3_4:59942720-59942739 Msa0510780:CDS 20.0%
!!! GTTAATGTTTGTATTTTCTT+CGG - chr3_4:59942919-59942938 Msa0510780:intron 20.0%
!!! TTAATGTTTGTATTTTCTTC+GGG - chr3_4:59942920-59942939 Msa0510780:intron 20.0%
!!! CATAAAATAGGCTTTTAAAT+AGG + chr3_4:59943362-59943381 None:intergenic 20.0%
!! TTATTTAGATGCTGATATAT+TGG + chr3_4:59943501-59943520 None:intergenic 20.0%
!! CTAAATAACAAATCATATGA+AGG - chr3_4:59943513-59943532 Msa0510780:CDS 20.0%
!! GCATTCTACAATTATAAAAA+AGG + chr3_4:59944013-59944032 None:intergenic 20.0%
!! GCATTCTACAATTATAAAAA+AGG + chr3_4:59944013-59944032 None:intergenic 20.0%
!!! TTTGTTATGTTTATTACCTT+AGG - chr3_4:59944306-59944325 Msa0510780:intron 20.0%
!! AAATAAAATGACAGAAAGAA+TGG + chr3_4:59944365-59944384 None:intergenic 20.0%
!! TTGAGATAAAAAAATCAGTT+TGG + chr3_4:59944683-59944702 None:intergenic 20.0%
!!! AACTGATTTTTTTATCTCAA+TGG - chr3_4:59944683-59944702 Msa0510780:CDS 20.0%
!! TATAATGAAGAGAAATTGTA+AGG + chr3_4:59944739-59944758 None:intergenic 20.0%
!! TACAATTTCTCTTCATTATA+AGG - chr3_4:59944739-59944758 Msa0510780:intron 20.0%
!! TATGATTCATAAAAGAAACA+TGG + chr3_4:59944766-59944785 None:intergenic 20.0%
!!! TTTTGATAAAAATCGGAAAA+TGG - chr3_4:59944862-59944881 Msa0510780:CDS 20.0%
!! TTTGATAAAAATCGGAAAAT+GGG - chr3_4:59944863-59944882 Msa0510780:CDS 20.0%
!! ATAACAAGTACAATAATAGT+AGG + chr3_4:59945947-59945966 None:intergenic 20.0%
!!! CAAATTTTTTAGCAAATAAG+TGG + chr3_4:59946362-59946381 None:intergenic 20.0%
!! TCTTTACTTATATTCTGTAT+TGG - chr3_4:59946398-59946417 Msa0510780:CDS 20.0%
!!! ATTATTGTTTTTGACTATTG+AGG - chr3_4:59946831-59946850 Msa0510780:intron 20.0%
!!! TTATTGTTTTTGACTATTGA+GGG - chr3_4:59946832-59946851 Msa0510780:intron 20.0%
!!! AAACAAAATTTTTCTTCCTT+TGG - chr3_4:59947155-59947174 Msa0510780:intron 20.0%
!!! AACAAAATTTTTCTTCCTTT+GGG - chr3_4:59947156-59947175 Msa0510780:intron 20.0%
!! ATATATTTAAATTCAGCTGA+CGG - chr3_4:59947547-59947566 Msa0510780:intron 20.0%
!! TTTCAACAAAAGAACAATAA+TGG - chr3_4:59947579-59947598 Msa0510780:intron 20.0%
!!! AATATACTTTTCATTCATAG+TGG + chr3_4:59947926-59947945 None:intergenic 20.0%
!! AGAATGATAATTCTTAAAGA+AGG + chr3_4:59948263-59948282 None:intergenic 20.0%
!!! AGTTTTAAATTTAGCATACA+CGG + chr3_4:59948607-59948626 None:intergenic 20.0%
! GAAAGTTTAAATACAAGACA+AGG - chr3_4:59942352-59942371 Msa0510780:CDS 25.0%
! GAAGTAATTATAATTCAGGA+TGG + chr3_4:59943012-59943031 None:intergenic 25.0%
! ACAGGAAGTAATTATAATTC+AGG + chr3_4:59943016-59943035 None:intergenic 25.0%
! GGCATTCTACAATTATAATA+GGG + chr3_4:59943086-59943105 None:intergenic 25.0%
! AGGCATTCTACAATTATAAT+AGG + chr3_4:59943087-59943106 None:intergenic 25.0%
! TATTATAATTGTAGAATGCC+TGG - chr3_4:59943086-59943105 Msa0510780:intron 25.0%
!! TAAAAGCCTATTTTATGCTA+AGG - chr3_4:59943365-59943384 Msa0510780:intron 25.0%
!!! TAATAAGTTTTGGCCTATTT+AGG + chr3_4:59943415-59943434 None:intergenic 25.0%
! AAATAGGCCAAAACTTATTA+AGG - chr3_4:59943415-59943434 Msa0510780:intron 25.0%
!! CTTTAGACCTTAATAAGTTT+TGG + chr3_4:59943425-59943444 None:intergenic 25.0%
! ATATGAAAAACTTAATAGGC+CGG - chr3_4:59943590-59943609 Msa0510780:intron 25.0%
! TAAGGCCTATTTAAATAAAC+AGG + chr3_4:59943658-59943677 None:intergenic 25.0%
! AATACAGTGTAAAAATGGTA+AGG - chr3_4:59943791-59943810 Msa0510780:intron 25.0%
! ACTCTCAAAAACAAAAAACT+AGG + chr3_4:59944126-59944145 None:intergenic 25.0%
! AGATATATGCTATAGAAACT+AGG + chr3_4:59944155-59944174 None:intergenic 25.0%
! CTTATAACAAACTCAAGATT+TGG + chr3_4:59944226-59944245 None:intergenic 25.0%
! CAAAAATAGAAATGCTACAT+AGG + chr3_4:59944592-59944611 None:intergenic 25.0%
! ATCTTTAGTCACTCTAATAT+AGG + chr3_4:59945344-59945363 None:intergenic 25.0%
! AAATAAAATGCTTACCCATT+TGG + chr3_4:59945921-59945940 None:intergenic 25.0%
!! TTCTTTTCGCAAATTATTAC+CGG - chr3_4:59946040-59946059 Msa0510780:CDS 25.0%
!! ATTTTCTTGGACAATAACAA+AGG - chr3_4:59946648-59946667 Msa0510780:intron 25.0%
! TGAAATTATCAAGGATTACT+TGG - chr3_4:59946674-59946693 Msa0510780:intron 25.0%
!! TCATTGATTAGAAATTCTTC+TGG + chr3_4:59946926-59946945 None:intergenic 25.0%
!! TAAATGCAATTTTCTCTTCA+GGG + chr3_4:59946960-59946979 None:intergenic 25.0%
! AATATAAATGCTTCAAAGCA+GGG - chr3_4:59947016-59947035 Msa0510780:intron 25.0%
!!! GGATTTTATGCAAATTTGTT+TGG - chr3_4:59947127-59947146 Msa0510780:intron 25.0%
! TTTCAGTCATTTGTTTCATT+CGG - chr3_4:59947325-59947344 Msa0510780:intron 25.0%
!! TTGATAGTTTGACAGAATTA+CGG + chr3_4:59947508-59947527 None:intergenic 25.0%
!!! TAATTTGTTCTTTCTGATAG+GGG + chr3_4:59947630-59947649 None:intergenic 25.0%
!!! GTAATTTGTTCTTTCTGATA+GGG + chr3_4:59947631-59947650 None:intergenic 25.0%
!!! TGTAATTTGTTCTTTCTGAT+AGG + chr3_4:59947632-59947651 None:intergenic 25.0%
! TTTATCTTCATAGTGATTGA+TGG + chr3_4:59947767-59947786 None:intergenic 25.0%
! AAACTCGTGTTTAAATAGTA+AGG + chr3_4:59948068-59948087 None:intergenic 25.0%
!!! AAGAATAACAAAACGGATTA+AGG + chr3_4:59948315-59948334 None:intergenic 25.0%
! CATAAGATTATGAAAAGAAC+TGG - chr3_4:59948383-59948402 Msa0510780:intron 25.0%
!! TTTGTTTGCAGATTCATTTT+AGG - chr3_4:59948686-59948705 Msa0510780:CDS 25.0%
! ATTTTTCACAGGTAAGTCTT+TGG + chr3_4:59942310-59942329 None:intergenic 30.0%
TCATCATAGTGATGAATCAA+AGG - chr3_4:59942470-59942489 Msa0510780:intron 30.0%
CTTCAATGTTCTAACAAGAA+TGG - chr3_4:59942582-59942601 Msa0510780:CDS 30.0%
GAAGGAATATAATTGAGTGA+AGG + chr3_4:59942641-59942660 None:intergenic 30.0%
!!! TATAATTTTTGAAGTAGGCC+AGG + chr3_4:59943255-59943274 None:intergenic 30.0%
TGGCCTACTTCAAAAATTAT+AGG - chr3_4:59943254-59943273 Msa0510780:intron 30.0%
!!! AGGCCTATAATTTTTGAAGT+AGG + chr3_4:59943260-59943279 None:intergenic 30.0%
TTTACACTGTATTGTACGTA+GGG + chr3_4:59943784-59943803 None:intergenic 30.0%
! TTTTACACTGTATTGTACGT+AGG + chr3_4:59943785-59943804 None:intergenic 30.0%
CGTACAATACAGTGTAAAAA+TGG - chr3_4:59943786-59943805 Msa0510780:intron 30.0%
AATTATAAAAAAGGGCAACC+CGG + chr3_4:59944004-59944023 None:intergenic 30.0%
GTAACAAATATCACATCCTA+AGG + chr3_4:59944325-59944344 None:intergenic 30.0%
! ATGTGATATTTGTTACATGC+AGG - chr3_4:59944329-59944348 Msa0510780:intron 30.0%
TTTATCTTGAATGTGAACTC+AGG + chr3_4:59944497-59944516 None:intergenic 30.0%
ATCATGAGGTAAAAAAGTCA+AGG + chr3_4:59944520-59944539 None:intergenic 30.0%
ATCTTGATTCATGAATCATG+AGG + chr3_4:59944534-59944553 None:intergenic 30.0%
ATAGAAATGCTACATAGGAT+TGG + chr3_4:59944587-59944606 None:intergenic 30.0%
TTCACAAAACAGTGGATATA+AGG + chr3_4:59944615-59944634 None:intergenic 30.0%
! TTATATCCACTGTTTTGTGA+AGG - chr3_4:59944614-59944633 Msa0510780:CDS 30.0%
TTAATTGAAGCAGTTGAGTT+TGG + chr3_4:59944797-59944816 None:intergenic 30.0%
AAACTCAACTGCTTCAATTA+AGG - chr3_4:59944796-59944815 Msa0510780:intron 30.0%
AATTGATGAGATGAAATGTG+AGG + chr3_4:59944842-59944861 None:intergenic 30.0%
TCTTTCCTAAACTGAGAATT+GGG + chr3_4:59945175-59945194 None:intergenic 30.0%
ATCTTTCCTAAACTGAGAAT+TGG + chr3_4:59945176-59945195 None:intergenic 30.0%
AAAGATTTAGCAGAACTACA+AGG - chr3_4:59945190-59945209 Msa0510780:intron 30.0%
AAGATTTAGCAGAACTACAA+GGG - chr3_4:59945191-59945210 Msa0510780:intron 30.0%
AGCTGCTTCAAAATTAGTTA+AGG - chr3_4:59945294-59945313 Msa0510780:intron 30.0%
! TTGATGTACTTGTTAGTGTA+TGG - chr3_4:59945368-59945387 Msa0510780:CDS 30.0%
TTCCTTATGGGAATTCATTT+CGG - chr3_4:59945401-59945420 Msa0510780:CDS 30.0%
ATTCTTTACAAGATAATGCC+TGG - chr3_4:59945430-59945449 Msa0510780:CDS 30.0%
! ATGAAAGGTGTGATAGAAAA+TGG - chr3_4:59945529-59945548 Msa0510780:CDS 30.0%
! TGAAAGGTGTGATAGAAAAT+GGG - chr3_4:59945530-59945549 Msa0510780:CDS 30.0%
GATAAACAAAGAACATTTGC+TGG - chr3_4:59945636-59945655 Msa0510780:CDS 30.0%
!! ATGTGTTGCTGCATATTTTA+AGG - chr3_4:59945752-59945771 Msa0510780:CDS 30.0%
!!! TGGAATTTTAGTTATCCAGT+TGG - chr3_4:59945852-59945871 Msa0510780:CDS 30.0%
TGACTTCATTCTCTTCTAAT+AGG - chr3_4:59946136-59946155 Msa0510780:CDS 30.0%
!! TGTTACTGTAGCTTTAATTG+AGG - chr3_4:59946198-59946217 Msa0510780:CDS 30.0%
!! GTTACTGTAGCTTTAATTGA+GGG - chr3_4:59946199-59946218 Msa0510780:CDS 30.0%
!! TTACTGTAGCTTTAATTGAG+GGG - chr3_4:59946200-59946219 Msa0510780:CDS 30.0%
GATATTAGAGTTTGATGCTA+TGG - chr3_4:59946443-59946462 Msa0510780:intron 30.0%
!!! GTGGAAGTTTTTGATTTTGA+TGG - chr3_4:59946489-59946508 Msa0510780:intron 30.0%
ATTCTGTTGATGTATGCTTT+AGG + chr3_4:59946560-59946579 None:intergenic 30.0%
AAAGCATACATCAACAGAAT+TGG - chr3_4:59946560-59946579 Msa0510780:intron 30.0%
! GTTGCATTTGAGAATTTTCT+TGG - chr3_4:59946635-59946654 Msa0510780:intron 30.0%
CAAAGGAGTTGAAATTATCA+AGG - chr3_4:59946665-59946684 Msa0510780:intron 30.0%
TCTACATTCCAGAAATTGTT+TGG - chr3_4:59946893-59946912 Msa0510780:intron 30.0%
CTACATTCCAGAAATTGTTT+GGG - chr3_4:59946894-59946913 Msa0510780:intron 30.0%
TTGATTAGAAATTCTTCTGG+AGG + chr3_4:59946923-59946942 None:intergenic 30.0%
! GTAAATGCAATTTTCTCTTC+AGG + chr3_4:59946961-59946980 None:intergenic 30.0%
GAAGAGAAAATTGCATTTAC+AGG - chr3_4:59946961-59946980 Msa0510780:intron 30.0%
GCATTTACAGGTACTAAATT+TGG - chr3_4:59946973-59946992 Msa0510780:intron 30.0%
CAATATAAATGCTTCAAAGC+AGG - chr3_4:59947015-59947034 Msa0510780:intron 30.0%
TGTTATCAATATCTTCCCAA+AGG + chr3_4:59947174-59947193 None:intergenic 30.0%
ATCAATGTGACTTTGACAAA+AGG + chr3_4:59947482-59947501 None:intergenic 30.0%
ATCAATCAAAGCATACATGA+TGG - chr3_4:59947523-59947542 Msa0510780:intron 30.0%
TCAATCAAAGCATACATGAT+GGG - chr3_4:59947524-59947543 Msa0510780:intron 30.0%
AAAGAACAATAATGGCATTG+TGG - chr3_4:59947587-59947606 Msa0510780:intron 30.0%
! TGATTGATGGTTACCTTAAT+TGG + chr3_4:59947754-59947773 None:intergenic 30.0%
GCTATCATGTTCATATCATA+AGG + chr3_4:59947820-59947839 None:intergenic 30.0%
! AAATCCTTTTCAATCTCTTG+AGG - chr3_4:59947868-59947887 Msa0510780:intron 30.0%
ATTTCCTCAAGAGATTGAAA+AGG + chr3_4:59947875-59947894 None:intergenic 30.0%
TTTGAATTGCTGAATTCAAG+AGG + chr3_4:59947995-59948014 None:intergenic 30.0%
! AGCATTTTCTTTGTTGCAAA+AGG - chr3_4:59948017-59948036 Msa0510780:intron 30.0%
TCGACGATAATGTTGTAAAA+TGG - chr3_4:59948041-59948060 Msa0510780:intron 30.0%
CTATTATCACTGAAAGCTTA+GGG + chr3_4:59948102-59948121 None:intergenic 30.0%
TCTATTATCACTGAAAGCTT+AGG + chr3_4:59948103-59948122 None:intergenic 30.0%
AGCTTTCAGTGATAATAGAA+AGG - chr3_4:59948104-59948123 Msa0510780:intron 30.0%
AAACATAGAACACACAATGT+TGG + chr3_4:59948191-59948210 None:intergenic 30.0%
!! TCAGTGATGGAAATTTTTGA+TGG - chr3_4:59948347-59948366 Msa0510780:intron 30.0%
TATGAAAAGAACTGGTTGTA+TGG - chr3_4:59948391-59948410 Msa0510780:intron 30.0%
ATGTTACGTACCAATTTAAC+AGG - chr3_4:59948465-59948484 Msa0510780:intron 30.0%
AATGAAGTTATGATCCTCAA+TGG - chr3_4:59948560-59948579 Msa0510780:CDS 30.0%
AAATATCAGACTCTCTTCTA+TGG + chr3_4:59948667-59948686 None:intergenic 30.0%
TAGGTACGAAATTGAGAAAT+CGG - chr3_4:59948705-59948724 Msa0510780:CDS 30.0%
ATGTATACATTGGCATTATG+TGG - chr3_4:59948755-59948774 Msa0510780:CDS 30.0%
! ATCCAAGTTTAAAATTCGAC+TGG - chr3_4:59948822-59948841 Msa0510780:CDS 30.0%
! TTCCAGTCGAATTTTAAACT+TGG + chr3_4:59948827-59948846 None:intergenic 30.0%
! TTCACACGAGAATTTTTCAC+AGG + chr3_4:59942321-59942340 None:intergenic 35.0%
!!! GAACGAGGAGTTTGTTTTTA+AGG - chr3_4:59942404-59942423 Msa0510780:CDS 35.0%
!!! GGAGTTTGTTTTTAAGGTGA+AGG - chr3_4:59942410-59942429 Msa0510780:CDS 35.0%
TAGTGATGAATCAAAGGTAG+TGG - chr3_4:59942476-59942495 Msa0510780:intron 35.0%
AGTGATGAATCAAAGGTAGT+GGG - chr3_4:59942477-59942496 Msa0510780:intron 35.0%
CAACGTGATCATCTAAAAGA+AGG + chr3_4:59942659-59942678 None:intergenic 35.0%
! TTTGTATTTTCTTCGGGTCT+AGG - chr3_4:59942926-59942945 Msa0510780:intron 35.0%
CTCAATATGAAAACTTGCAC+AGG + chr3_4:59943034-59943053 None:intergenic 35.0%
! CTTACCATGTTTTACACAAG+AGG + chr3_4:59943173-59943192 None:intergenic 35.0%
CTCTTGTGTAAAACATGGTA+AGG - chr3_4:59943171-59943190 Msa0510780:intron 35.0%
!! GCTTCATCAGGCTTTTAAAA+AGG + chr3_4:59943332-59943351 None:intergenic 35.0%
! AGGCTTTTAAATAGGCTTTC+AGG + chr3_4:59943354-59943373 None:intergenic 35.0%
GTCAAGCCTTAGCATAAAAT+AGG + chr3_4:59943374-59943393 None:intergenic 35.0%
ATGTAAGCCTACTCCTAAAT+AGG - chr3_4:59943399-59943418 Msa0510780:intron 35.0%
CCTATTTAAATAAACAGGCC+AGG + chr3_4:59943653-59943672 None:intergenic 35.0%
CCTGGCCTGTTTATTTAAAT+AGG - chr3_4:59943650-59943669 Msa0510780:intron 35.0%
! GCCTTATTAATAAACGAGCT+GGG - chr3_4:59943695-59943714 Msa0510780:intron 35.0%
TTACACTGTATTGTACGTAG+GGG + chr3_4:59943783-59943802 None:intergenic 35.0%
GTGCAATAGAGCTCAAAAAA+GGG + chr3_4:59943892-59943911 None:intergenic 35.0%
!!! TTTTTTGAGCTCTATTGCAC+CGG - chr3_4:59943892-59943911 Msa0510780:CDS 35.0%
GTGCAATAGAGCTCAAAAAA+GGG + chr3_4:59943892-59943911 None:intergenic 35.0%
!!! TTTTTTGAGCTCTATTGCAC+CGG - chr3_4:59943892-59943911 Msa0510780:CDS 35.0%
ATGCTGAAACTTTGCTAGAT+AGG - chr3_4:59944029-59944048 Msa0510780:CDS 35.0%
TGCTGAAACTTTGCTAGATA+GGG - chr3_4:59944030-59944049 Msa0510780:CDS 35.0%
GCATTATTTCAACGTTGATG+TGG - chr3_4:59944098-59944117 Msa0510780:intron 35.0%
!! TATGTTGAGAAGAGTGTTAG+AGG + chr3_4:59944402-59944421 None:intergenic 35.0%
GTTAAACCTTCACAAAACAG+TGG + chr3_4:59944623-59944642 None:intergenic 35.0%
GCTTGTGTTGTACATAATCA+GGG - chr3_4:59944705-59944724 Msa0510780:CDS 35.0%
AAAAATCGGAAAATGGGTGA+AGG - chr3_4:59944869-59944888 Msa0510780:CDS 35.0%
TTATCGCTAATCGCATAGAA+AGG - chr3_4:59944909-59944928 Msa0510780:CDS 35.0%
! TGATGTTTCTGAACAATCCA+CGG + chr3_4:59944966-59944985 None:intergenic 35.0%
TGCCTTCTTCAAAACTACAA+GGG + chr3_4:59945033-59945052 None:intergenic 35.0%
ATGCCTTCTTCAAAACTACA+AGG + chr3_4:59945034-59945053 None:intergenic 35.0%
!! AATTTTCAGGACTTTCTGGT+CGG + chr3_4:59945081-59945100 None:intergenic 35.0%
!! TGCAAATTTTCAGGACTTTC+TGG + chr3_4:59945085-59945104 None:intergenic 35.0%
AGAAAGTCCTGAAAATTTGC+AGG - chr3_4:59945084-59945103 Msa0510780:intron 35.0%
GAAAGTCCTGAAAATTTGCA+GGG - chr3_4:59945085-59945104 Msa0510780:intron 35.0%
GGACAACAAATTTGCAAGAA+GGG - chr3_4:59945212-59945231 Msa0510780:intron 35.0%
GACAACAAATTTGCAAGAAG+GGG - chr3_4:59945213-59945232 Msa0510780:intron 35.0%
AGACATATCTTCATCTTTCC+AGG + chr3_4:59945245-59945264 None:intergenic 35.0%
AATATAGGTCTGTTCTTCAG+TGG + chr3_4:59945329-59945348 None:intergenic 35.0%
TCCTTATGGGAATTCATTTC+GGG - chr3_4:59945402-59945421 Msa0510780:CDS 35.0%
AGAAGATTTGTCTTGTGTAG+AGG - chr3_4:59945453-59945472 Msa0510780:CDS 35.0%
CTCACATCTTGTGATATCAT+GGG - chr3_4:59945480-59945499 Msa0510780:CDS 35.0%
TCACATCTTGTGATATCATG+GGG - chr3_4:59945481-59945500 Msa0510780:CDS 35.0%
CTTTCATCATTGTGCTTTGT+AGG + chr3_4:59945516-59945535 None:intergenic 35.0%
CTACAAAGCACAATGATGAA+AGG - chr3_4:59945514-59945533 Msa0510780:CDS 35.0%
! GAAAGGTGTGATAGAAAATG+GGG - chr3_4:59945531-59945550 Msa0510780:CDS 35.0%
ATAGAAAATGGGGCTAAACA+AGG - chr3_4:59945541-59945560 Msa0510780:CDS 35.0%
!!! TTGCTGCATATTTTAAGGTG+TGG - chr3_4:59945757-59945776 Msa0510780:CDS 35.0%
TTAGGAGAACTAGTAACAAG+TGG - chr3_4:59945832-59945851 Msa0510780:CDS 35.0%
! TTTCAGATTGAAGGTGTATC+CGG - chr3_4:59945994-59946013 Msa0510780:CDS 35.0%
!! AAAAGTGTCTTGTTGGTGTT+AGG + chr3_4:59946022-59946041 None:intergenic 35.0%
!! CGAAAAGAAAAGTGTCTTGT+TGG + chr3_4:59946029-59946048 None:intergenic 35.0%
!! TACTGTAGCTTTAATTGAGG+GGG - chr3_4:59946201-59946220 Msa0510780:CDS 35.0%
! TGATCTTGTTTGTCCATTAC+AGG + chr3_4:59946281-59946300 None:intergenic 35.0%
ACTTCCACATACAAAACTGA+TGG + chr3_4:59946477-59946496 None:intergenic 35.0%
GAGAAGAAGGAAAAAGAAGT+AGG - chr3_4:59946696-59946715 Msa0510780:intron 35.0%
GGAAAAAGAAGTAGGCAAAA+AGG - chr3_4:59946704-59946723 Msa0510780:intron 35.0%
ACACACACACACACATATAT+GGG + chr3_4:59946751-59946770 None:intergenic 35.0%
TGGAATGTAGAATTCCTTTG+AGG + chr3_4:59946884-59946903 None:intergenic 35.0%
CTTCCTAATGATGCTAATGA+TGG + chr3_4:59947211-59947230 None:intergenic 35.0%
GAAGAATTATGGCCAATGTA+GGG + chr3_4:59947234-59947253 None:intergenic 35.0%
CAAGTTTGACAAAATCACAG+TGG - chr3_4:59947424-59947443 Msa0510780:intron 35.0%
! ACATTTTTGCCTCATCTTCT+AGG + chr3_4:59947708-59947727 None:intergenic 35.0%
CTTCAAAACTTCGCAAATGT+GGG + chr3_4:59947797-59947816 None:intergenic 35.0%
CCTGTGCAAGAATAACAAAA+CGG + chr3_4:59948322-59948341 None:intergenic 35.0%
!! GTGATGGAAATTTTTGATGG+AGG - chr3_4:59948350-59948369 Msa0510780:intron 35.0%
TAAAACCTGATGTACTCGAA+AGG - chr3_4:59948441-59948460 Msa0510780:intron 35.0%
TATCCAAACACAAACACTGA+AGG - chr3_4:59948527-59948546 Msa0510780:intron 35.0%
TGCAAGTGTGATGTATACAT+TGG - chr3_4:59948745-59948764 Msa0510780:CDS 35.0%
TCTCGTGTGAAGCTTAAACT+TGG - chr3_4:59942330-59942349 Msa0510780:CDS 40.0%
GAAACACGTTCAATCCCATT+TGG - chr3_4:59942382-59942401 Msa0510780:CDS 40.0%
ACAAACTCCTCGTTCCAAAT+GGG + chr3_4:59942399-59942418 None:intergenic 40.0%
AACAAACTCCTCGTTCCAAA+TGG + chr3_4:59942400-59942419 None:intergenic 40.0%
TAAGGTGAAGGATATTGCTG+AGG - chr3_4:59942422-59942441 Msa0510780:CDS 40.0%
!!! TCAAAGGTAGTGGGTTTTGT+TGG - chr3_4:59942486-59942505 Msa0510780:intron 40.0%
AGCAAATATTGCCACCTACT+TGG - chr3_4:59942553-59942572 Msa0510780:intron 40.0%
GTTGTTGTCATGTGACTGAA+AGG - chr3_4:59943122-59943141 Msa0510780:intron 40.0%
ACAGCCTCTTGTGTAAAACA+TGG - chr3_4:59943166-59943185 Msa0510780:intron 40.0%
TGGTAAGGTTGCGTACAATT+AGG - chr3_4:59943186-59943205 Msa0510780:intron 40.0%
GGTAAGGTTGCGTACAATTA+GGG - chr3_4:59943187-59943206 Msa0510780:intron 40.0%
GTAAGGTTGCGTACAATTAG+GGG - chr3_4:59943188-59943207 Msa0510780:intron 40.0%
GTACAATTAGGGGTGGAAAT+GGG - chr3_4:59943198-59943217 Msa0510780:intron 40.0%
AAAAATTATAGGCCTGAGCC+TGG - chr3_4:59943265-59943284 Msa0510780:intron 40.0%
!! ATCAGGCTTTTAAAAAGGCC+AGG + chr3_4:59943327-59943346 None:intergenic 40.0%
!! GTTTTGGCCTATTTAGGAGT+AGG + chr3_4:59943409-59943428 None:intergenic 40.0%
AAAAGCCTATTAAGCCCATC+AGG + chr3_4:59943616-59943635 None:intergenic 40.0%
!!! TTTTTTTGCAAGCCTTAGCC+TGG - chr3_4:59943632-59943651 Msa0510780:intron 40.0%
TAAATAAACAGGCCAGGCTA+AGG + chr3_4:59943647-59943666 None:intergenic 40.0%
! CCAGGCTCAAGCTTTTTATA+AGG + chr3_4:59943676-59943695 None:intergenic 40.0%
CCTTATAAAAAGCTTGAGCC+TGG - chr3_4:59943673-59943692 Msa0510780:intron 40.0%
GCTCGTTTATTAATAAGGCC+AGG + chr3_4:59943694-59943713 None:intergenic 40.0%
!! GGCCTTATTAATAAACGAGC+TGG - chr3_4:59943694-59943713 Msa0510780:intron 40.0%
GCCCAGCTCGTTTATTAATA+AGG + chr3_4:59943699-59943718 None:intergenic 40.0%
CTTTAAACAGGCTAGGTTGT+AGG - chr3_4:59943728-59943747 Msa0510780:intron 40.0%
GTTGCGTACAATACACCAAA+TGG - chr3_4:59943813-59943832 Msa0510780:intron 40.0%
CGTACAATACACCAAATGGT+GGG - chr3_4:59943817-59943836 Msa0510780:intron 40.0%
GGTGCAATAGAGCTCAAAAA+AGG + chr3_4:59943893-59943912 None:intergenic 40.0%
!! TTTTTGAGCTCTATTGCACC+GGG - chr3_4:59943893-59943912 Msa0510780:CDS 40.0%
GGTGCAATAGAGCTCAAAAA+AGG + chr3_4:59943893-59943912 None:intergenic 40.0%
!! TTTTTGAGCTCTATTGCACC+GGG - chr3_4:59943893-59943912 Msa0510780:CDS 40.0%
GCTGAAACTTTGCTAGATAG+GGG - chr3_4:59944031-59944050 Msa0510780:CDS 40.0%
GGCTTGTGTTGTACATAATC+AGG - chr3_4:59944704-59944723 Msa0510780:CDS 40.0%
AGATGAAATGTGAGGACGTT+CGG + chr3_4:59944834-59944853 None:intergenic 40.0%
TGAAGGCAAACAGTTGTTGA+AGG - chr3_4:59944886-59944905 Msa0510780:CDS 40.0%
AGAACGAAACTCAAAATCCG+TGG - chr3_4:59944946-59944965 Msa0510780:CDS 40.0%
! TACAAGGGGGTGAATTTTCT+TGG + chr3_4:59945018-59945037 None:intergenic 40.0%
CCTTCTTCAAAACTACAAGG+GGG + chr3_4:59945031-59945050 None:intergenic 40.0%
GCCTTCTTCAAAACTACAAG+GGG + chr3_4:59945032-59945051 None:intergenic 40.0%
!! TGAAGAAGGCATTGCACTAA+TGG - chr3_4:59945042-59945061 Msa0510780:intron 40.0%
GGGACAACAAATTTGCAAGA+AGG - chr3_4:59945211-59945230 Msa0510780:intron 40.0%
CAAATTTGCAAGAAGGGGAT+TGG - chr3_4:59945218-59945237 Msa0510780:intron 40.0%
AATTCCCATAAGGAACCTCA+GGG + chr3_4:59945396-59945415 None:intergenic 40.0%
ACCCGAAATGAATTCCCATA+AGG + chr3_4:59945406-59945425 None:intergenic 40.0%
ACACAAGACAAATCTTCTCC+AGG + chr3_4:59945451-59945470 None:intergenic 40.0%
CCATGATATCACAAGATGTG+AGG + chr3_4:59945482-59945501 None:intergenic 40.0%
CCTCACATCTTGTGATATCA+TGG - chr3_4:59945479-59945498 Msa0510780:CDS 40.0%
TCTTGTGATATCATGGGGAA+TGG - chr3_4:59945486-59945505 Msa0510780:CDS 40.0%
! GAGGTTTAAGGTGCTAGATA+AGG - chr3_4:59945606-59945625 Msa0510780:CDS 40.0%
! GTTTAAGGTGCTAGATAAGG+AGG - chr3_4:59945609-59945628 Msa0510780:CDS 40.0%
ATTGAACTGCCAGATAGCTT+AGG - chr3_4:59945814-59945833 Msa0510780:CDS 40.0%
! ACTAGTTCTCCTAAGCTATC+TGG + chr3_4:59945826-59945845 None:intergenic 40.0%
TATGATAAACACGCTCCAAC+TGG + chr3_4:59945870-59945889 None:intergenic 40.0%
GTTGGAGCGTGTTTATCATA+TGG - chr3_4:59945870-59945889 Msa0510780:CDS 40.0%
TGTGCAAGCTAGATTCCAAA+TGG - chr3_4:59945903-59945922 Msa0510780:CDS 40.0%
GTGCAAGCTAGATTCCAAAT+GGG - chr3_4:59945904-59945923 Msa0510780:CDS 40.0%
CACCAACACTTTCAGATTGA+AGG - chr3_4:59945985-59946004 Msa0510780:CDS 40.0%
! CACCTTCAATCTGAAAGTGT+TGG + chr3_4:59945990-59946009 None:intergenic 40.0%
!! ATGAAGTGCTGACACAGATA+CGG + chr3_4:59946082-59946101 None:intergenic 40.0%
CTTCTAATAGGAACTGACCA+TGG - chr3_4:59946148-59946167 Msa0510780:CDS 40.0%
TAGTCTCATTGGAGTCAACA+GGG - chr3_4:59946230-59946249 Msa0510780:CDS 40.0%
TTGAGACATCAGATCCTCAA+TGG - chr3_4:59946314-59946333 Msa0510780:CDS 40.0%
ACATCAGATCCTCAATGGAA+TGG - chr3_4:59946319-59946338 Msa0510780:CDS 40.0%
AAGGACAAACCATTCCATTG+AGG + chr3_4:59946331-59946350 None:intergenic 40.0%
CAAATAAGTGGCAAGACAGA+AGG + chr3_4:59946350-59946369 None:intergenic 40.0%
!! ACCACCATCAGTTTTGTATG+TGG - chr3_4:59946470-59946489 Msa0510780:intron 40.0%
TCCACATACAAAACTGATGG+TGG + chr3_4:59946474-59946493 None:intergenic 40.0%
!! TTTTGATGGTCCATTTGACC+AGG - chr3_4:59946503-59946522 Msa0510780:intron 40.0%
AGTGAAACATCCTGGTCAAA+TGG + chr3_4:59946516-59946535 None:intergenic 40.0%
TTTGACCAGGATGTTTCACT+TGG - chr3_4:59946516-59946535 Msa0510780:intron 40.0%
AACAGAATTGGCAGACATGT+GGG - chr3_4:59946572-59946591 Msa0510780:intron 40.0%
CAAGGATTACTTGGAGAAGA+AGG - chr3_4:59946683-59946702 Msa0510780:intron 40.0%
CACACACACACACATATATG+GGG + chr3_4:59946750-59946769 None:intergenic 40.0%
CACACACACACACACATATA+TGG + chr3_4:59946752-59946771 None:intergenic 40.0%
TCAATCTTCCATCACCTCAA+AGG - chr3_4:59946867-59946886 Msa0510780:intron 40.0%
!! GTAGAATTCCTTTGAGGTGA+TGG + chr3_4:59946878-59946897 None:intergenic 40.0%
!! TCGGCTATTTCTTTCTGCAA+GGG - chr3_4:59947099-59947118 Msa0510780:intron 40.0%
ATTTCTTTCTGCAAGGGTTC+TGG - chr3_4:59947105-59947124 Msa0510780:intron 40.0%
TTTCTTTCTGCAAGGGTTCT+GGG - chr3_4:59947106-59947125 Msa0510780:intron 40.0%
CCTAATGATGCTAATGATGG+AGG + chr3_4:59947208-59947227 None:intergenic 40.0%
CCTCCATCATTAGCATCATT+AGG - chr3_4:59947205-59947224 Msa0510780:intron 40.0%
ATCATTAGGAAGCCCTACAT+TGG - chr3_4:59947219-59947238 Msa0510780:intron 40.0%
CGAAGAATTATGGCCAATGT+AGG + chr3_4:59947235-59947254 None:intergenic 40.0%
TTGGCCATAATTCTTCGAAG+AGG - chr3_4:59947238-59947257 Msa0510780:intron 40.0%
TCGTCCTCTTCGAAGAATTA+TGG + chr3_4:59947245-59947264 None:intergenic 40.0%
ATAATTCTTCGAAGAGGACG+AGG - chr3_4:59947244-59947263 Msa0510780:intron 40.0%
AAGATGAAGAAGGAAGGCTT+AGG - chr3_4:59947296-59947315 Msa0510780:intron 40.0%
! TGCTGATTAAGAATACCTGG+AGG + chr3_4:59947356-59947375 None:intergenic 40.0%
! GCATGCTGATTAAGAATACC+TGG + chr3_4:59947359-59947378 None:intergenic 40.0%
TTATCAGTTGAGTGCATGCT+TGG - chr3_4:59947393-59947412 Msa0510780:intron 40.0%
! AGAAGAGCATGAAGATCAAG+AGG - chr3_4:59947651-59947670 Msa0510780:intron 40.0%
TAGGATAGATCCAGAGTCTT+CGG + chr3_4:59947689-59947708 None:intergenic 40.0%
TGGATCTATCCTAGAAGATG+AGG - chr3_4:59947696-59947715 Msa0510780:intron 40.0%
AAGATGAGGCAAAAATGTCC+AGG - chr3_4:59947710-59947729 Msa0510780:intron 40.0%
TAGTTCAGCAGAGTAAATCC+TGG + chr3_4:59947731-59947750 None:intergenic 40.0%
CTCTGCTGAACTACCAATTA+AGG - chr3_4:59947738-59947757 Msa0510780:intron 40.0%
GCTTCAAAACTTCGCAAATG+TGG + chr3_4:59947798-59947817 None:intergenic 40.0%
GAACACACAATGTTGGATCA+CGG + chr3_4:59948184-59948203 None:intergenic 40.0%
!! AAACGGATTAAGGAGAGACT+TGG + chr3_4:59948305-59948324 None:intergenic 40.0%
!!! CCGTTTTGTTATTCTTGCAC+AGG - chr3_4:59948319-59948338 Msa0510780:intron 40.0%
! TCGAGTACATCAGGTTTTAC+TGG + chr3_4:59948440-59948459 None:intergenic 40.0%
CTGACACATGCCTGTTAAAT+TGG + chr3_4:59948478-59948497 None:intergenic 40.0%
CTTCCTTCAGTGTTTGTGTT+TGG + chr3_4:59948533-59948552 None:intergenic 40.0%
CAAACACAAACACTGAAGGA+AGG - chr3_4:59948531-59948550 Msa0510780:intron 40.0%
ACACGGAAGTGATCAGAAAA+TGG + chr3_4:59948590-59948609 None:intergenic 40.0%
! GAAATTGAGAAATCGGCTCT+TGG - chr3_4:59948712-59948731 Msa0510780:CDS 40.0%
ACATTGGCATTATGTGGCTT+AGG - chr3_4:59948761-59948780 Msa0510780:CDS 40.0%
AGTTTCAGCAAAGGATCAAC+AGG - chr3_4:59948791-59948810 Msa0510780:CDS 40.0%
! GTTCAATCCCATTTGGAACG+AGG - chr3_4:59942389-59942408 Msa0510780:CDS 45.0%
TCAAAACCAACCTCACCAAC+AGG + chr3_4:59942525-59942544 None:intergenic 45.0%
!!! TGTTGGTGAGGTTGGTTTTG+AGG - chr3_4:59942524-59942543 Msa0510780:intron 45.0%
CATTGAAGCTCGAACCAAGT+AGG + chr3_4:59942570-59942589 None:intergenic 45.0%
TGGATAGCTCGCTTGAGTTA+AGG + chr3_4:59942992-59943011 None:intergenic 45.0%
GTCATGTGACTGAAAGGTCA+CGG - chr3_4:59943128-59943147 Msa0510780:intron 45.0%
TCATGTGACTGAAAGGTCAC+GGG - chr3_4:59943129-59943148 Msa0510780:intron 45.0%
! TTACACAAGAGGCTGTTTCC+AGG + chr3_4:59943162-59943181 None:intergenic 45.0%
CGTACAATTAGGGGTGGAAA+TGG - chr3_4:59943197-59943216 Msa0510780:intron 45.0%
!!! TTTTGAAGTAGGCCAGGCTT+AGG + chr3_4:59943249-59943268 None:intergenic 45.0%
CTCGAAAATGAGCCTATGAC+GGG + chr3_4:59943298-59943317 None:intergenic 45.0%
CCTCGAAAATGAGCCTATGA+CGG + chr3_4:59943299-59943318 None:intergenic 45.0%
ATAGGCTTTCAGGCTTCATC+AGG + chr3_4:59943344-59943363 None:intergenic 45.0%
! AGCCTGTTTAAAGCCTAGCT+CGG + chr3_4:59943721-59943740 None:intergenic 45.0%
!! AGCTAGGCTTTAAACAGGCT+AGG - chr3_4:59943721-59943740 Msa0510780:intron 45.0%
ACTGTATTGTACGTAGGGGT+GGG + chr3_4:59943779-59943798 None:intergenic 45.0%
GCGTACAATACACCAAATGG+TGG - chr3_4:59943816-59943835 Msa0510780:intron 45.0%
AGCTCAAAAAAGGGAAACCC+CGG + chr3_4:59943883-59943902 None:intergenic 45.0%
!!! CCCCCTTGTAGTTTTGAAGA+AGG - chr3_4:59945028-59945047 Msa0510780:intron 45.0%
AGTCCTGAAAATTTGCAGGG+CGG - chr3_4:59945088-59945107 Msa0510780:intron 45.0%
! ATACCGCCCTGCAAATTTTC+AGG + chr3_4:59945094-59945113 None:intergenic 45.0%
ATTCCCATAAGGAACCTCAG+GGG + chr3_4:59945395-59945414 None:intergenic 45.0%
GAATTCCCATAAGGAACCTC+AGG + chr3_4:59945397-59945416 None:intergenic 45.0%
TGGGGCTAAACAAGGTTTGA+AGG - chr3_4:59945549-59945568 Msa0510780:CDS 45.0%
GAGCAAGTAGGTTAGCAAAC+TGG + chr3_4:59945585-59945604 None:intergenic 45.0%
TTGCTAACCTACTTGCTCAG+AGG - chr3_4:59945587-59945606 Msa0510780:CDS 45.0%
CCTTAAACCTCTGAGCAAGT+AGG + chr3_4:59945597-59945616 None:intergenic 45.0%
CCTACTTGCTCAGAGGTTTA+AGG - chr3_4:59945594-59945613 Msa0510780:CDS 45.0%
AGACAGAAAGCCAGTGGAAT+TGG - chr3_4:59945668-59945687 Msa0510780:CDS 45.0%
GGCAGGCAATTACATACTTC+TGG - chr3_4:59945692-59945711 Msa0510780:CDS 45.0%
!! TGAAAGCACATGGTGATGGA+TGG - chr3_4:59946173-59946192 Msa0510780:CDS 45.0%
!! GAAAGCACATGGTGATGGAT+GGG - chr3_4:59946174-59946193 Msa0510780:CDS 45.0%
!! CTGTTGACTCCAATGAGACT+AGG + chr3_4:59946231-59946250 None:intergenic 45.0%
CTAGTCTCATTGGAGTCAAC+AGG - chr3_4:59946229-59946248 Msa0510780:CDS 45.0%
AGGGTTGTCAGATCCTTATG+TGG - chr3_4:59946249-59946268 Msa0510780:CDS 45.0%
CATGTCCAAGTGAAACATCC+TGG + chr3_4:59946524-59946543 None:intergenic 45.0%
CAACAGAATTGGCAGACATG+TGG - chr3_4:59946571-59946590 Msa0510780:intron 45.0%
CAACTTCGATTGAGCAGACT+GGG + chr3_4:59946619-59946638 None:intergenic 45.0%
GAGGCAACCCAAACAATTTC+TGG + chr3_4:59946904-59946923 None:intergenic 45.0%
ATGACCATGCCTTCTAATGC+AGG - chr3_4:59947075-59947094 Msa0510780:intron 45.0%
TGACCATGCCTTCTAATGCA+GGG - chr3_4:59947076-59947095 Msa0510780:intron 45.0%
!! GTCGGCTATTTCTTTCTGCA+AGG - chr3_4:59947098-59947117 Msa0510780:intron 45.0%
TCCTTCTTCATCTTGCGTCT+TGG + chr3_4:59947290-59947309 None:intergenic 45.0%
AGACGCAAGATGAAGAAGGA+AGG - chr3_4:59947290-59947309 Msa0510780:intron 45.0%
TGAGTGCATGCTTGGAATCA+CGG - chr3_4:59947401-59947420 Msa0510780:intron 45.0%
GCATGAAGATCAAGAGGTCT+TGG - chr3_4:59947657-59947676 Msa0510780:intron 45.0%
AGGATAGATCCAGAGTCTTC+GGG + chr3_4:59947688-59947707 None:intergenic 45.0%
AGGTTGACACAACAGCAAAC+AGG + chr3_4:59948243-59948262 None:intergenic 45.0%
TGCACAGGTAAGTTCAGTGA+TGG - chr3_4:59948334-59948353 Msa0510780:intron 45.0%
TGGACTATGACACTACACCT+TGG - chr3_4:59948411-59948430 Msa0510780:intron 45.0%
GGACTATGACACTACACCTT+GGG - chr3_4:59948412-59948431 Msa0510780:intron 45.0%
!!! TCAGGTTTTACTGGTTCCCA+AGG + chr3_4:59948431-59948450 None:intergenic 45.0%
! ACATGCCTTTCGAGTACATC+AGG + chr3_4:59948449-59948468 None:intergenic 45.0%
CAGAAAATGGAACGCCATTG+AGG + chr3_4:59948577-59948596 None:intergenic 45.0%
!! GGAGCTCTAAGTTTCAGCAA+AGG - chr3_4:59948782-59948801 Msa0510780:CDS 45.0%
!!! ATATTATGTTTTTTTTTTAA+TGG - chr3_4:59942688-59942707 Msa0510780:CDS 5.0%
!!! GGTAGTGGGTTTTGTTGGTG+AGG - chr3_4:59942491-59942510 Msa0510780:intron 50.0%
!!! TGGGTTTTGTTGGTGAGGCA+CGG - chr3_4:59942496-59942515 Msa0510780:intron 50.0%
TGAAGCTCGAACCAAGTAGG+TGG + chr3_4:59942567-59942586 None:intergenic 50.0%
ACAACTTTACCAGTTGCGCC+AGG + chr3_4:59943107-59943126 None:intergenic 50.0%
AAGGTCACGGGTTTAAGTCC+TGG - chr3_4:59943141-59943160 Msa0510780:intron 50.0%
AGGTTGCGTACAATTAGGGG+TGG - chr3_4:59943191-59943210 Msa0510780:intron 50.0%
! ATTAGGGGTGGAAATGGGCT+AGG - chr3_4:59943203-59943222 Msa0510780:intron 50.0%
!! ATGAGCCTATGACGGGTAAC+AGG + chr3_4:59943291-59943310 None:intergenic 50.0%
! CCGTCATAGGCTCATTTTCG+AGG - chr3_4:59943296-59943315 Msa0510780:intron 50.0%
!! ATAGGCTCATTTTCGAGGCC+TGG - chr3_4:59943301-59943320 Msa0510780:intron 50.0%
!! GCTTTTAAAAAGGCCAGGCC+AGG + chr3_4:59943322-59943341 None:intergenic 50.0%
AACTTAATAGGCCGGCCTGA+TGG - chr3_4:59943598-59943617 Msa0510780:intron 50.0%
ACTTAATAGGCCGGCCTGAT+GGG - chr3_4:59943599-59943618 Msa0510780:intron 50.0%
TTGTACGTAGGGGTGGGAAT+AGG + chr3_4:59943773-59943792 None:intergenic 50.0%
CACTGTATTGTACGTAGGGG+TGG + chr3_4:59943780-59943799 None:intergenic 50.0%
ATAGAGCTCCCGCATATGCA+GGG + chr3_4:59943856-59943875 None:intergenic 50.0%
AATAGAGCTCCCGCATATGC+AGG + chr3_4:59943857-59943876 None:intergenic 50.0%
ATAGAGCTCCCGCATATGCA+GGG + chr3_4:59943856-59943875 None:intergenic 50.0%
AATAGAGCTCCCGCATATGC+AGG + chr3_4:59943857-59943876 None:intergenic 50.0%
GAGCTCAAAAAAGGGCAACC+TGG + chr3_4:59943974-59943993 None:intergenic 50.0%
TCGCGCCCAATTCTCAGTTT+AGG - chr3_4:59945167-59945186 Msa0510780:intron 50.0%
TGTTAGTGTATGGACCCCTG+AGG - chr3_4:59945378-59945397 Msa0510780:CDS 50.0%
CTTTGCAGACAGAAAGCCAG+TGG - chr3_4:59945662-59945681 Msa0510780:CDS 50.0%
CAGAAAGCCAGTGGAATTGG+TGG - chr3_4:59945671-59945690 Msa0510780:CDS 50.0%
!! GTCTTGTTGGTGTTAGGCAC+CGG + chr3_4:59946016-59946035 None:intergenic 50.0%
! GACCATGGCATGAAAGCACA+TGG - chr3_4:59946163-59946182 Msa0510780:CDS 50.0%
CACCATGTGCTTTCATGCCA+TGG + chr3_4:59946168-59946187 None:intergenic 50.0%
! GGCATGAAAGCACATGGTGA+TGG - chr3_4:59946169-59946188 Msa0510780:CDS 50.0%
GCAACTTCGATTGAGCAGAC+TGG + chr3_4:59946620-59946639 None:intergenic 50.0%
CATGCCTTCTAATGCAGGGT+CGG - chr3_4:59947080-59947099 Msa0510780:intron 50.0%
ATAGCCGACCCTGCATTAGA+AGG + chr3_4:59947087-59947106 None:intergenic 50.0%
GCCAAGACGCAAGATGAAGA+AGG - chr3_4:59947286-59947305 Msa0510780:intron 50.0%
TTTCATTCGGTTCTGCCTCC+AGG - chr3_4:59947338-59947357 Msa0510780:intron 50.0%
!! TTGGTAATGCCCGAAGACTC+TGG - chr3_4:59947676-59947695 Msa0510780:intron 50.0%
TGGAGACGTAGACACAGTTG+AGG - chr3_4:59948153-59948172 Msa0510780:intron 50.0%
GGAGACGTAGACACAGTTGA+GGG - chr3_4:59948154-59948173 Msa0510780:intron 50.0%
! CGGATTCCTGTTGGTGAGGT+TGG - chr3_4:59942516-59942535 Msa0510780:intron 55.0%
TGTAGAATGCCTGGCGCAAC+TGG - chr3_4:59943095-59943114 Msa0510780:intron 55.0%
GGCTTAGGCCTTACAAAGCC+CGG + chr3_4:59943234-59943253 None:intergenic 55.0%
! GGCTTTGTAAGGCCTAAGCC+TGG - chr3_4:59943234-59943253 Msa0510780:intron 55.0%
GCCTATTAAGCCCATCAGGC+CGG + chr3_4:59943612-59943631 None:intergenic 55.0%
!! GGCCGAGCTAGGCTTTAAAC+AGG - chr3_4:59943716-59943735 Msa0510780:intron 55.0%
ATGCGGGAGCTCTATTGCAC+CGG - chr3_4:59943861-59943880 Msa0510780:CDS 55.0%
!! TGCAAGAAGGGGATTGGTCC+TGG - chr3_4:59945224-59945243 Msa0510780:intron 55.0%
TGGACCCCTGAGGTTCCTTA+TGG - chr3_4:59945388-59945407 Msa0510780:CDS 55.0%
GGACCCCTGAGGTTCCTTAT+GGG - chr3_4:59945389-59945408 Msa0510780:CDS 55.0%
! AAGCCAGTGGAATTGGTGGC+AGG - chr3_4:59945675-59945694 Msa0510780:CDS 55.0%
TTGCCTGCCACCAATTCCAC+TGG + chr3_4:59945681-59945700 None:intergenic 55.0%
GGTGTGGTCCAAGTCAACCT+CGG - chr3_4:59945773-59945792 Msa0510780:CDS 55.0%
GTGTGGTCCAAGTCAACCTC+GGG - chr3_4:59945774-59945793 Msa0510780:CDS 55.0%
TGTGGTCCAAGTCAACCTCG+GGG - chr3_4:59945775-59945794 Msa0510780:CDS 55.0%
CTCGGGGGTTGGAGTTTAGA+GGG - chr3_4:59945791-59945810 Msa0510780:CDS 55.0%
CGGACAGCAGACATAGAGAC+CGG + chr3_4:59946062-59946081 None:intergenic 55.0%
GACATGTGGGTCGTGCTTGA+AGG - chr3_4:59946585-59946604 Msa0510780:intron 55.0%
CGACCCTGCATTAGAAGGCA+TGG + chr3_4:59947082-59947101 None:intergenic 55.0%
!! GAGGACGAGGTATCGATGCA+AGG - chr3_4:59947257-59947276 Msa0510780:intron 55.0%
!! CGAGGTATCGATGCAAGGCA+CGG - chr3_4:59947262-59947281 Msa0510780:intron 55.0%
TCTACGTCTCCAACTGCAGC+TGG + chr3_4:59948145-59948164 None:intergenic 55.0%
GGTGAGGCACGGATTCCTGT+TGG - chr3_4:59942507-59942526 Msa0510780:intron 60.0%
GGCACGGATTCCTGTTGGTG+AGG - chr3_4:59942512-59942531 Msa0510780:intron 60.0%
!! GGGTGGAAATGGGCTAGGCT+GGG - chr3_4:59943208-59943227 Msa0510780:intron 60.0%
!! CCTATGACGGGTAACAGGCC+AGG + chr3_4:59943286-59943305 None:intergenic 60.0%
CCTGGCCTGTTACCCGTCAT+AGG - chr3_4:59943283-59943302 Msa0510780:intron 60.0%
!! CTCATTTTCGAGGCCTGGCC+TGG - chr3_4:59943306-59943325 Msa0510780:intron 60.0%
!! GCCGGCCTGATGGGCTTAAT+AGG - chr3_4:59943608-59943627 Msa0510780:intron 60.0%
TAAACGAGCTGGGCCGAGCT+AGG - chr3_4:59943705-59943724 Msa0510780:intron 60.0%
GCTAGGTTGTAGGCCCCTGT+CGG - chr3_4:59943738-59943757 Msa0510780:intron 60.0%
ATAGGCCAGACCGTCCGACA+GGG + chr3_4:59943755-59943774 None:intergenic 60.0%
AATAGGCCAGACCGTCCGAC+AGG + chr3_4:59943756-59943775 None:intergenic 60.0%
! CAAATGGTGGGACCCCTTCC+CGG - chr3_4:59943829-59943848 Msa0510780:intron 60.0%
CATATGCAGGGTCCGGGAAG+GGG + chr3_4:59943844-59943863 None:intergenic 60.0%
GCATATGCAGGGTCCGGGAA+GGG + chr3_4:59943845-59943864 None:intergenic 60.0%
CTTCCCGGACCCTGCATATG+CGG - chr3_4:59943844-59943863 Msa0510780:intron 60.0%
TTCCCGGACCCTGCATATGC+GGG - chr3_4:59943845-59943864 Msa0510780:intron 60.0%
TGCGGGAGCTCTATTGCACC+GGG - chr3_4:59943862-59943881 Msa0510780:CDS 60.0%
! TGCACCGGGTTGCCCTTTTG+TGG - chr3_4:59943907-59943926 Msa0510780:CDS 60.0%
! GCACCGGGTTGCCCTTTTGT+GGG - chr3_4:59943908-59943927 Msa0510780:CDS 60.0%
GGTCCCACAAAAGGGCAACC+CGG + chr3_4:59943914-59943933 None:intergenic 60.0%
CGGGAAGGGGTCCCACAAAA+GGG + chr3_4:59943922-59943941 None:intergenic 60.0%
! CCTTTTGTGGGACCCCTTCC+CGG - chr3_4:59943920-59943939 Msa0510780:CDS 60.0%
CATATGCAGGGTCCGGGAAG+GGG + chr3_4:59943844-59943863 None:intergenic 60.0%
GCATATGCAGGGTCCGGGAA+GGG + chr3_4:59943845-59943864 None:intergenic 60.0%
CTTCCCGGACCCTGCATATG+CGG - chr3_4:59943844-59943863 Msa0510780:intron 60.0%
TTCCCGGACCCTGCATATGC+GGG - chr3_4:59943845-59943864 Msa0510780:intron 60.0%
TGCGGGAGCTCTATTGCACC+AGG - chr3_4:59943862-59943881 Msa0510780:CDS 60.0%
GTGGTCCAAGTCAACCTCGG+GGG - chr3_4:59945776-59945795 Msa0510780:CDS 60.0%
TCCAAGTCAACCTCGGGGGT+TGG - chr3_4:59945780-59945799 Msa0510780:CDS 60.0%
TCCAACCCCCGAGGTTGACT+TGG + chr3_4:59945784-59945803 None:intergenic 60.0%
CCTCTAAACTCCAACCCCCG+AGG + chr3_4:59945793-59945812 None:intergenic 60.0%
CCTCGGGGGTTGGAGTTTAG+AGG - chr3_4:59945790-59945809 Msa0510780:CDS 60.0%
GGGGGCTGACCTAGTCTCAT+TGG - chr3_4:59946219-59946238 Msa0510780:CDS 60.0%
AGCCACTCTCCAGCTGCAGT+TGG - chr3_4:59948133-59948152 Msa0510780:intron 60.0%
CTCCAACTGCAGCTGGAGAG+TGG + chr3_4:59948138-59948157 None:intergenic 60.0%
!! GGGGTGGAAATGGGCTAGGC+TGG - chr3_4:59943207-59943226 Msa0510780:intron 65.0%
!! GGAAATGGGCTAGGCTGGGC+CGG - chr3_4:59943212-59943231 Msa0510780:intron 65.0%
!! GAAATGGGCTAGGCTGGGCC+GGG - chr3_4:59943213-59943232 Msa0510780:intron 65.0%
! AGGCTGGGCCGGGCTTTGTA+AGG - chr3_4:59943223-59943242 Msa0510780:intron 65.0%
ACGGGTAACAGGCCAGGCTC+AGG + chr3_4:59943280-59943299 None:intergenic 65.0%
GGTTGTAGGCCCCTGTCGGA+CGG - chr3_4:59943742-59943761 Msa0510780:intron 65.0%
TAGGCCAGACCGTCCGACAG+GGG + chr3_4:59943754-59943773 None:intergenic 65.0%
CGGGAAGGGGTCCCACCATT+TGG + chr3_4:59943831-59943850 None:intergenic 65.0%
CGCATATGCAGGGTCCGGGA+AGG + chr3_4:59943846-59943865 None:intergenic 65.0%
CTCCCGCATATGCAGGGTCC+GGG + chr3_4:59943850-59943869 None:intergenic 65.0%
GCTCCCGCATATGCAGGGTC+CGG + chr3_4:59943851-59943870 None:intergenic 65.0%
GCGGGAGCTCTATTGCACCG+GGG - chr3_4:59943863-59943882 Msa0510780:CDS 65.0%
CCGGGAAGGGGTCCCACAAA+AGG + chr3_4:59943923-59943942 None:intergenic 65.0%
CGCATATGCAGGGTCCGGGA+AGG + chr3_4:59943846-59943865 None:intergenic 65.0%
CTCCCGCATATGCAGGGTCC+GGG + chr3_4:59943850-59943869 None:intergenic 65.0%
GCTCCCGCATATGCAGGGTC+CGG + chr3_4:59943851-59943870 None:intergenic 65.0%
TAGGCCCCTGTCGGACGGTC+TGG - chr3_4:59943747-59943766 Msa0510780:intron 70.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 59942273 59948906 59942273 ID=Msa0510780;Name=Msa0510780
chr3_4 mRNA 59942273 59948906 59942273 ID=Msa0510780-mRNA-1;Parent=Msa0510780;Name=Msa0510780-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0.12|0|1|1|1|9|0|955
chr3_4 exon 59948552 59948906 59948552 ID=Msa0510780-mRNA-1:exon:14223;Parent=Msa0510780-mRNA-1
chr3_4 exon 59945329 59946453 59945329 ID=Msa0510780-mRNA-1:exon:14222;Parent=Msa0510780-mRNA-1
chr3_4 exon 59944839 59945021 59944839 ID=Msa0510780-mRNA-1:exon:14221;Parent=Msa0510780-mRNA-1
chr3_4 exon 59944508 59944737 59944508 ID=Msa0510780-mRNA-1:exon:14220;Parent=Msa0510780-mRNA-1
chr3_4 exon 59944197 59944313 59944197 ID=Msa0510780-mRNA-1:exon:14219;Parent=Msa0510780-mRNA-1
chr3_4 exon 59943850 59944082 59943850 ID=Msa0510780-mRNA-1:exon:14218;Parent=Msa0510780-mRNA-1
chr3_4 exon 59943420 59943567 59943420 ID=Msa0510780-mRNA-1:exon:14217;Parent=Msa0510780-mRNA-1
chr3_4 exon 59942572 59942838 59942572 ID=Msa0510780-mRNA-1:exon:14216;Parent=Msa0510780-mRNA-1
chr3_4 exon 59942273 59942482 59942273 ID=Msa0510780-mRNA-1:exon:14215;Parent=Msa0510780-mRNA-1
chr3_4 CDS 59948552 59948906 59948552 ID=Msa0510780-mRNA-1:cds;Parent=Msa0510780-mRNA-1
chr3_4 CDS 59945329 59946453 59945329 ID=Msa0510780-mRNA-1:cds;Parent=Msa0510780-mRNA-1
chr3_4 CDS 59944839 59945021 59944839 ID=Msa0510780-mRNA-1:cds;Parent=Msa0510780-mRNA-1
chr3_4 CDS 59944508 59944737 59944508 ID=Msa0510780-mRNA-1:cds;Parent=Msa0510780-mRNA-1
chr3_4 CDS 59944197 59944313 59944197 ID=Msa0510780-mRNA-1:cds;Parent=Msa0510780-mRNA-1
chr3_4 CDS 59943850 59944082 59943850 ID=Msa0510780-mRNA-1:cds;Parent=Msa0510780-mRNA-1
chr3_4 CDS 59943420 59943567 59943420 ID=Msa0510780-mRNA-1:cds;Parent=Msa0510780-mRNA-1
chr3_4 CDS 59942572 59942838 59942572 ID=Msa0510780-mRNA-1:cds;Parent=Msa0510780-mRNA-1
chr3_4 CDS 59942273 59942482 59942273 ID=Msa0510780-mRNA-1:cds;Parent=Msa0510780-mRNA-1
Gene Sequence

>Msa0510780

ATGTTGAACAAGTTATATGTATGTGTATTAGAAGCCAAAGACTTACCTGTGAAAAATTCTCGTGTGAAGCTTAAACTTGGAAAGTTTAAATACAAGACAAGGATATTGAGAAACACGTTCAATCCCATTTGGAACGAGGAGTTTGTTTTTAAGGTGAAGGATATTGCTGAGGATGTGCTTGTTGTCAATGTTGTTAATCATCATAGTGATGAATCAAAGGTAGTGGGTTTTGTTGGTGAGGCACGGATTCCTGTTGGTGAGGTTGGTTTTGAGGATAATAAGCAAATATTGCCACCTACTTGGTTCGAGCTTCAATGTTCTAACAAGAATGGCAAATTTTTCAACAAATTTTGTGGGAAGATTCTCCTTACAATTTCTCTTCATTATAAGGACCATGTTTCTTTTATGAATCATAAGCATTCTCCAAACTCAACTGCTTCAATTAAGGACTCAACAGAATCCGAACGTCCTCACATTTCATCTCATCAATTTTTTGATAAAAATCGGAAAATGGGTGAAGGCAAACAGTTGTTGAAGGTTATCGCTAATCGCATAGAAAGGATTTTACATAAGAAAGAACGAAACTCAAAATCCGTGGATTGTTCAGAAACATCAAATTCATTGTCTGATTATGAAGATAGTGTCCAAGAAAATTCACCCCCTTGTAGTTTTGAAGAAGGCATTGCACTAATGGAGTCAAGAGATAACCGACCAGAAAGTCCTGAAAATTTGCAGGGCGGTATTTTAGTAGATAAGATTTATGAAGTATCTTCACACAATCTTAATGTTGTTCTTTTCGCGCCCAATTCTCAGTTTAGGAAAGATTTAGCAGAACTACAAGGGACAACAAATTTGCAAGAAGGGGATTGGTCCTGGAAAGATGAAGATATGTCTTGTTTGACTCGAGTCGTCAACTATACAAAAGCTGCTTCAAAATTAGTTAAGGCTCTCAATACCACTGAAGAACAGACCTATATTAGAGTGACTAAAGATGAATTTGATGTACTTGTTAGTGTATGGACCCCTGAGGTTCCTTATGGGAATTCATTTCGGGTCAAAATTCTTTACAAGATAATGCCTGGAGAAGATTTGTCTTGTGTAGAGGAATCCTCACATCTTGTGATATCATGGGGAATGGTTTTCCTACAAAGCACAATGATGAAAGGTGTGATAGAAAATGGGGCTAAACAAGGTTTGAAGGAGAGTTTTGACCAGTTTGCTAACCTACTTGCTCAGAGGTTTAAGGTGCTAGATAAGGAGGATTTGATAAACAAAGAACATTTGCTGGCAACTTTGCAGACAGAAAGCCAGTGGAATTGGTGGCAGGCAATTACATACTTCTGGAATTTCACAGTTGTTTCCACATTTTTTATGTGTTTATATGTGTTGCTGCATATTTTAAGGTGTGGTCCAAGTCAACCTCGGGGGTTGGAGTTTAGAGGGATTGAACTGCCAGATAGCTTAGGAGAACTAGTAACAAGAACTGACCATGGCATGAAAGCACATGGTGATGGATGGGTTGTTACTGTAGCTTTAATTGAGGGGGCTGACCTAGTCTCATTGGAGTCAACAGGGTTGTCAGATCCTTATGTGGTTTTCACCTGTAATGGACAAACAAGATCAAGCTCTGTCAAGCTTGAGACATCAGATCCTCAATGGAATGAGATATTAGAGTTTGATGCTATGGAAGAACCACCATCAGTTTTGTATGTGGAAGTTTTTGATTTTGATGGTCCATTTGACCAGGATGTTTCACTTGGACATGCTGAGATCAATTTCCTAAAGCATACATCAACAGAATTGGCAGACATGTGGGTCGTGCTTGAAGGAAAACTCGCCCAGTCTGCTCAATCGAAGTTGCATTTGAGAATTTTCTTGGACAATAACAAAGGATTCAATCTTCCATCACCTCAAAGGAATTCTACATTCCAGAAATTGTTTGGGTTGCCTCCAGAAGAATTTCTAATCAATGATTTCACATGTTCCCTGAAGAGAAAATTGCATTTACAGGGTCGGCTATTTCTTTCTGCAAGGGTTCTGGGATTTTATGCAAATTTGTTTGGACATAAAACAAAATTTTTCTTCCTTTGGGAAGATATTGATAACATTCTAGTGCTTCCTCCATCATTAGCATCATTAGGAAGCCCTACATTGGCCATAATTCTTCGAAGAGGACGAGGTATCGATGCAAGGCACGGTGCCAAGACGCAAGATGAAGAAGGAAGGCTTAGGTTTCATTTTCAAGCAAGAATGCTGAACCCCTATCAGAAAGAACAAATTACAGAAGAGCATGAAGATCAAGAGGTCTTGGTAATGCCCGAAGACTCTGGATCTATCCTAGAAGATGAGGCAAAAATGTCCAGGATTTACTCTGCTGAACTACCAATTAAGGTAAGTTCAGTGATGGAAATTTTTGATGGAGGAAACATAGAGCATAAGATTATGAAAAGAACTGGTTGTATGGACTATGACACTACACCTTGGGAACCAGTAAAACCTGATGTACTCGAAAGGCATGTTACGTACCAATTTAACAGGCATGTGTCAGTTTTTGATGTTACAAGCACACAACAAAAATATCCAAACACAAACACTGAAGGAAGGATTGTGAATGAAGTTATGATCCTCAATGGCGTTCCATTTTCTGATCACTTCCGTATTCATTTTAGGTACGAAATTGAGAAATCGGCTCTTGGTGAATGTGCTTGCAAGTGTGATGTATACATTGGCATTATGTGGCTTAGGAGCTCTAAGTTTCAGCAAAGGATCAACAGGAATATAACATCCAAGTTTAAAATTCGACTGGAAGAAATATTTGAACTACTGCAGAAAGAGATTTTATTGATGTCTCAGAAATCGCATGTGTAA

Protein sequence

>Msa0510780

MLNKLYVCVLEAKDLPVKNSRVKLKLGKFKYKTRILRNTFNPIWNEEFVFKVKDIAEDVLVVNVVNHHSDESKVVGFVGEARIPVGEVGFEDNKQILPPTWFELQCSNKNGKFFNKFCGKILLTISLHYKDHVSFMNHKHSPNSTASIKDSTESERPHISSHQFFDKNRKMGEGKQLLKVIANRIERILHKKERNSKSVDCSETSNSLSDYEDSVQENSPPCSFEEGIALMESRDNRPESPENLQGGILVDKIYEVSSHNLNVVLFAPNSQFRKDLAELQGTTNLQEGDWSWKDEDMSCLTRVVNYTKAASKLVKALNTTEEQTYIRVTKDEFDVLVSVWTPEVPYGNSFRVKILYKIMPGEDLSCVEESSHLVISWGMVFLQSTMMKGVIENGAKQGLKESFDQFANLLAQRFKVLDKEDLINKEHLLATLQTESQWNWWQAITYFWNFTVVSTFFMCLYVLLHILRCGPSQPRGLEFRGIELPDSLGELVTRTDHGMKAHGDGWVVTVALIEGADLVSLESTGLSDPYVVFTCNGQTRSSSVKLETSDPQWNEILEFDAMEEPPSVLYVEVFDFDGPFDQDVSLGHAEINFLKHTSTELADMWVVLEGKLAQSAQSKLHLRIFLDNNKGFNLPSPQRNSTFQKLFGLPPEEFLINDFTCSLKRKLHLQGRLFLSARVLGFYANLFGHKTKFFFLWEDIDNILVLPPSLASLGSPTLAIILRRGRGIDARHGAKTQDEEGRLRFHFQARMLNPYQKEQITEEHEDQEVLVMPEDSGSILEDEAKMSRIYSAELPIKVSSVMEIFDGGNIEHKIMKRTGCMDYDTTPWEPVKPDVLERHVTYQFNRHVSVFDVTSTQQKYPNTNTEGRIVNEVMILNGVPFSDHFRIHFRYEIEKSALGECACKCDVYIGIMWLRSSKFQQRINRNITSKFKIRLEEIFELLQKEILLMSQKSHV*