Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0465880 | XP_003602077.1 | 95.739 | 352 | 15 | 0 | 1 | 352 | 1 | 352 | 0.0 | 657 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0465880 | sp|Q84P23|4CLL9_ARATH | 50.427 | 351 | 161 | 5 | 11 | 352 | 6 | 352 | 5.87e-107 | 327 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0465880 | G7J515 | 95.739 | 352 | 15 | 0 | 1 | 352 | 1 | 352 | 0.0 | 657 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0465880 | Msa0510240 | 0.950424 | 1.695253e-108 | -8.615850e-47 |
| Msa0465880 | Msa0859120 | -0.816304 | 5.923952e-52 | -8.615850e-47 |
| Msa0358220 | Msa0465880 | 0.926753 | 3.040741e-91 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0465880 | MtrunA17_Chr3g0116271 | 95.739 | 352 | 15 | 0 | 1 | 352 | 1 | 352 | 0.0 | 657 |
| Msa0465880 | MtrunA17_Chr3g0116251 | 89.831 | 354 | 30 | 3 | 1 | 352 | 1 | 350 | 0.0 | 597 |
| Msa0465880 | MtrunA17_Chr1g0186071 | 45.559 | 349 | 176 | 6 | 5 | 352 | 16 | 351 | 5.01e-80 | 255 |
| Msa0465880 | MtrunA17_Chr8g0353341 | 35.150 | 367 | 198 | 11 | 11 | 352 | 6 | 357 | 7.83e-59 | 199 |
| Msa0465880 | MtrunA17_Chr1g0157401 | 35.000 | 360 | 192 | 11 | 16 | 352 | 14 | 354 | 4.00e-57 | 195 |
| Msa0465880 | MtrunA17_Chr1g0157431 | 33.693 | 371 | 204 | 11 | 16 | 363 | 14 | 365 | 9.76e-57 | 193 |
| Msa0465880 | MtrunA17_Chr4g0028411 | 37.982 | 337 | 184 | 9 | 29 | 352 | 12 | 336 | 1.42e-55 | 190 |
| Msa0465880 | MtrunA17_Chr2g0327341 | 35.735 | 347 | 194 | 10 | 19 | 352 | 3 | 333 | 1.92e-52 | 182 |
| Msa0465880 | MtrunA17_Chr1g0197391 | 36.127 | 346 | 199 | 8 | 17 | 350 | 22 | 357 | 1.06e-50 | 177 |
| Msa0465880 | MtrunA17_Chr4g0039791 | 32.692 | 364 | 219 | 10 | 2 | 352 | 5 | 355 | 1.44e-43 | 158 |
| Msa0465880 | MtrunA17_Chr5g0409771 | 34.211 | 304 | 178 | 7 | 63 | 352 | 54 | 349 | 1.55e-42 | 155 |
| Msa0465880 | MtrunA17_Chr1g0180541 | 33.048 | 351 | 199 | 12 | 23 | 352 | 5 | 340 | 4.70e-41 | 151 |
| Msa0465880 | MtrunA17_Chr1g0180551 | 32.239 | 335 | 192 | 10 | 40 | 352 | 92 | 413 | 1.15e-38 | 145 |
| Msa0465880 | MtrunA17_Chr5g0409791 | 31.949 | 313 | 185 | 8 | 63 | 352 | 55 | 362 | 9.25e-38 | 142 |
| Msa0465880 | MtrunA17_Chr3g0102411 | 27.273 | 330 | 215 | 9 | 36 | 354 | 20 | 335 | 3.85e-33 | 129 |
| Msa0465880 | MtrunA17_Chr4g0000461 | 28.620 | 297 | 194 | 6 | 67 | 352 | 43 | 332 | 1.80e-28 | 116 |
| Msa0465880 | MtrunA17_Chr5g0395431 | 28.739 | 341 | 217 | 8 | 26 | 352 | 50 | 378 | 3.48e-27 | 112 |
| Msa0465880 | MtrunA17_Chr4g0072561 | 27.451 | 306 | 196 | 8 | 63 | 352 | 45 | 340 | 1.58e-26 | 110 |
| Msa0465880 | MtrunA17_Chr2g0334131 | 50.000 | 74 | 37 | 0 | 279 | 352 | 1 | 74 | 2.92e-16 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0465880 | AT5G63380.1 | 50.427 | 351 | 161 | 5 | 11 | 352 | 6 | 352 | 5.96e-108 | 327 |
| Msa0465880 | AT5G38120.4 | 35.405 | 370 | 198 | 11 | 1 | 352 | 1 | 347 | 2.89e-59 | 199 |
| Msa0465880 | AT5G38120.2 | 35.405 | 370 | 198 | 11 | 1 | 352 | 1 | 347 | 2.89e-59 | 199 |
| Msa0465880 | AT5G38120.3 | 35.405 | 370 | 198 | 11 | 1 | 352 | 1 | 347 | 6.81e-59 | 199 |
| Msa0465880 | AT5G38120.1 | 35.405 | 370 | 198 | 11 | 1 | 352 | 1 | 347 | 1.71e-58 | 198 |
| Msa0465880 | AT1G20490.2 | 33.799 | 358 | 195 | 10 | 16 | 352 | 10 | 346 | 5.76e-58 | 194 |
| Msa0465880 | AT1G20490.1 | 33.799 | 358 | 195 | 10 | 16 | 352 | 10 | 346 | 5.76e-58 | 194 |
| Msa0465880 | AT1G20510.3 | 34.540 | 359 | 191 | 12 | 15 | 352 | 3 | 338 | 3.05e-54 | 185 |
| Msa0465880 | AT1G20510.2 | 34.540 | 359 | 191 | 12 | 15 | 352 | 3 | 338 | 4.84e-54 | 185 |
| Msa0465880 | AT1G20500.1 | 32.584 | 356 | 210 | 9 | 11 | 352 | 5 | 344 | 7.79e-54 | 186 |
| Msa0465880 | AT1G20510.1 | 34.540 | 359 | 191 | 12 | 15 | 352 | 3 | 338 | 2.10e-53 | 185 |
| Msa0465880 | AT1G20480.1 | 32.418 | 364 | 206 | 12 | 10 | 352 | 15 | 359 | 1.69e-49 | 175 |
| Msa0465880 | AT4G05160.1 | 34.670 | 349 | 200 | 9 | 19 | 352 | 3 | 338 | 4.02e-47 | 168 |
| Msa0465880 | AT4G19010.1 | 31.788 | 302 | 184 | 8 | 66 | 352 | 62 | 356 | 3.13e-37 | 141 |
| Msa0465880 | AT1G62940.1 | 28.869 | 336 | 206 | 9 | 29 | 350 | 13 | 329 | 1.97e-34 | 133 |
| Msa0465880 | AT3G21240.2 | 30.058 | 346 | 209 | 9 | 23 | 352 | 17 | 345 | 1.15e-31 | 125 |
| Msa0465880 | AT3G21240.3 | 30.058 | 346 | 209 | 9 | 23 | 352 | 17 | 345 | 1.15e-31 | 125 |
| Msa0465880 | AT3G21240.1 | 30.058 | 346 | 209 | 9 | 23 | 352 | 17 | 345 | 2.91e-31 | 124 |
| Msa0465880 | AT1G51680.2 | 28.701 | 331 | 197 | 8 | 45 | 352 | 38 | 352 | 4.78e-30 | 120 |
| Msa0465880 | AT1G51680.3 | 28.701 | 331 | 197 | 8 | 45 | 352 | 38 | 352 | 5.82e-30 | 120 |
| Msa0465880 | AT1G51680.1 | 28.701 | 331 | 197 | 8 | 45 | 352 | 38 | 352 | 9.57e-30 | 120 |
| Msa0465880 | AT1G65060.2 | 29.706 | 340 | 208 | 10 | 27 | 352 | 33 | 355 | 3.95e-29 | 118 |
| Msa0465880 | AT1G65060.1 | 29.706 | 340 | 208 | 10 | 27 | 352 | 33 | 355 | 8.70e-29 | 117 |
| Msa0465880 | AT3G21230.4 | 27.139 | 339 | 225 | 5 | 24 | 347 | 24 | 355 | 2.33e-26 | 109 |
| Msa0465880 | AT3G21230.2 | 27.139 | 339 | 225 | 5 | 24 | 347 | 24 | 355 | 5.23e-26 | 108 |
| Msa0465880 | AT3G21230.1 | 27.139 | 339 | 225 | 5 | 24 | 347 | 24 | 355 | 7.86e-26 | 108 |
| Msa0465880 | AT3G21230.3 | 27.139 | 339 | 225 | 5 | 24 | 347 | 24 | 355 | 1.10e-25 | 108 |
Find 140 sgRNAs with CRISPR-Local
Find 356 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGGAGAGAGGTTGGGAGGG+TGG | 0.253200 | 3_3:-66346634 | None:intergenic |
| GGTTGGGAGGGTGGAGGAAG+AGG | 0.260867 | 3_3:-66346625 | None:intergenic |
| GACAGTGCCAAGGGGTAGTT+TGG | 0.266390 | 3_3:-66347007 | None:intergenic |
| CGTCATCATACGCGTGCTTC+AGG | 0.280905 | 3_3:-66347218 | None:intergenic |
| TTTGATTTGGCGGAGGAAGG+TGG | 0.289151 | 3_3:-66346755 | None:intergenic |
| TTTGACTCGTCCGGTTGTTC+CGG | 0.302096 | 3_3:-66347142 | None:intergenic |
| GCGGAGGCTGTGGAAGGTTC+TGG | 0.316498 | 3_3:-66346593 | None:intergenic |
| GGGAGCGGTGGTGCGCCGCT+TGG | 0.320085 | 3_3:+66347495 | Msa0465880:CDS |
| ATGAAGAGAGGGATTTGATT+TGG | 0.332556 | 3_3:-66346768 | None:intergenic |
| ACCTGCACAATTTCCACATT+GGG | 0.334454 | 3_3:-66347552 | None:intergenic |
| GGTAACTTCATCGCTTTAAT+CGG | 0.343989 | 3_3:+66347183 | Msa0465880:CDS |
| ATTAGTTCGATTCGGTTGTT+GGG | 0.344628 | 3_3:+66347474 | Msa0465880:CDS |
| GGAGCGGTGGTGCGCCGCTT+GGG | 0.353021 | 3_3:+66347496 | Msa0465880:CDS |
| GGGCGATTGGGCGGAGGCTG+TGG | 0.356963 | 3_3:-66346603 | None:intergenic |
| TTGGGAGGGTGGAGGAAGAG+GGG | 0.365124 | 3_3:-66346623 | None:intergenic |
| TGAGAGCAGTAACCGGTGTT+TGG | 0.373573 | 3_3:-66346568 | None:intergenic |
| GTTGGGAGGGTGGAGGAAGA+GGG | 0.390963 | 3_3:-66346624 | None:intergenic |
| CTCTTCTCATCCGGAACAAC+CGG | 0.392218 | 3_3:+66347132 | Msa0465880:CDS |
| GAGAGAGGTTGGGAGGGTGG+AGG | 0.392686 | 3_3:-66346631 | None:intergenic |
| TGTTACAGTGTGGTTGGTAT+TGG | 0.409247 | 3_3:-66346521 | None:intergenic |
| GTTGTTGGTGACGGCGGTGG+TGG | 0.409335 | 3_3:-66346686 | None:intergenic |
| GGAGGAAGGTGGGGTAAGTG+AGG | 0.409454 | 3_3:-66346744 | None:intergenic |
| GAGAGCAGTAACCGGTGTTT+GGG | 0.418632 | 3_3:-66346567 | None:intergenic |
| GGGGAGGAGAGTGGGTTAGC+AGG | 0.422508 | 3_3:-66346907 | None:intergenic |
| GTTGGTGACGGCGGTGGTGG+TGG | 0.425025 | 3_3:-66346683 | None:intergenic |
| TTGATTTGGCGGAGGAAGGT+GGG | 0.425769 | 3_3:-66346754 | None:intergenic |
| TGAAGGCGGTTGAGAAGTAT+AGG | 0.426249 | 3_3:+66347379 | Msa0465880:CDS |
| GAGGAGGGAGAAATAGAGTA+CGG | 0.430842 | 3_3:-66346863 | None:intergenic |
| GTGGAGGAAGAGGGGCGATT+GGG | 0.431823 | 3_3:-66346615 | None:intergenic |
| GAAGAGGGGCGATTGGGCGG+AGG | 0.432504 | 3_3:-66346609 | None:intergenic |
| TATTAGTTCGATTCGGTTGT+TGG | 0.435812 | 3_3:+66347473 | Msa0465880:CDS |
| GATGAGAGCGATGTGGCCTT+TGG | 0.439362 | 3_3:-66346815 | None:intergenic |
| GGATTTGATTTGGCGGAGGA+AGG | 0.439543 | 3_3:-66346758 | None:intergenic |
| CCCCAATGTGGAAATTGTGC+AGG | 0.440981 | 3_3:+66347551 | Msa0465880:CDS |
| GAGGAAGAGGGGCGATTGGG+CGG | 0.446771 | 3_3:-66346612 | None:intergenic |
| GGTGGAGGAAGAGGGGCGAT+TGG | 0.448469 | 3_3:-66346616 | None:intergenic |
| CGGTGGTGCGCCGCTTGGGA+AGG | 0.448533 | 3_3:+66347500 | Msa0465880:CDS |
| TGTTTCGACAGGGCGAAGTT+CGG | 0.451751 | 3_3:-66347085 | None:intergenic |
| AGTCGGCGAGGGAGAGAGGT+TGG | 0.452070 | 3_3:-66346642 | None:intergenic |
| GTCGGCGAGGGAGAGAGGTT+GGG | 0.457260 | 3_3:-66346641 | None:intergenic |
| GGAAGGTGGGGTAAGTGAGG+TGG | 0.459896 | 3_3:-66346741 | None:intergenic |
| GATGAGGGCGGTGGTGTTGT+TGG | 0.465856 | 3_3:-66346701 | None:intergenic |
| AGTGAGGTGGTGGTCGGTAG+CGG | 0.466840 | 3_3:-66346728 | None:intergenic |
| GTCGGTAGCGGCGTCGATGA+GGG | 0.468202 | 3_3:-66346716 | None:intergenic |
| ATAGAGTACGGGGACGTGTA+TGG | 0.470056 | 3_3:-66346851 | None:intergenic |
| TAATACTCCTTTGACTCGTC+CGG | 0.471789 | 3_3:-66347151 | None:intergenic |
| GGTGTTGTTGGTGACGGCGG+TGG | 0.475016 | 3_3:-66346689 | None:intergenic |
| TCTGATTGACTTGTTTCGAC+AGG | 0.476408 | 3_3:-66347096 | None:intergenic |
| GCCGCTTGGGAAGGAGGTTG+CGG | 0.477833 | 3_3:+66347509 | Msa0465880:CDS |
| GATGGTGAGAGCTTTGGCCA+TGG | 0.477837 | 3_3:+66347311 | Msa0465880:CDS |
| TGGAGAGAGTAGTGTGTGAT+TGG | 0.477926 | 3_3:-66346795 | None:intergenic |
| AGTATGATATTAGTTCGATT+CGG | 0.481766 | 3_3:+66347466 | Msa0465880:CDS |
| ACAGTGCCAAGGGGTAGTTT+GGG | 0.485690 | 3_3:-66347006 | None:intergenic |
| GATTGAAGATGAACCGCATC+CGG | 0.487397 | 3_3:+66347242 | Msa0465880:CDS |
| AACCTGCACAATTTCCACAT+TGG | 0.488140 | 3_3:-66347553 | None:intergenic |
| CTGAAGCACGCGTATGATGA+CGG | 0.488866 | 3_3:+66347219 | Msa0465880:CDS |
| GGCGGTGGTGTTGTTGGTGA+CGG | 0.491691 | 3_3:-66346695 | None:intergenic |
| GCAGCAATCCTCTTCTCATC+CGG | 0.491754 | 3_3:+66347123 | Msa0465880:CDS |
| AAGAGAGGGATTTGATTTGG+CGG | 0.493043 | 3_3:-66346765 | None:intergenic |
| TGAAGCACGCGTATGATGAC+GGG | 0.493539 | 3_3:+66347220 | Msa0465880:CDS |
| GAGTGGGTTAGCAGGAGCTA+TGG | 0.493763 | 3_3:-66346899 | None:intergenic |
| GATTGGGCGGAGGCTGTGGA+AGG | 0.499317 | 3_3:-66346599 | None:intergenic |
| TGGTGCGCCGCTTGGGAAGG+AGG | 0.500170 | 3_3:+66347503 | Msa0465880:CDS |
| ATGGTGAGAGCTTTGGCCAT+GGG | 0.504644 | 3_3:+66347312 | Msa0465880:CDS |
| AGTGTCGCCACCGTTGATTA+CGG | 0.508220 | 3_3:+66347416 | Msa0465880:CDS |
| GACGTGGAGAATGCGATGAC+CGG | 0.509346 | 3_3:-66346964 | None:intergenic |
| TGATTTGGCGGAGGAAGGTG+GGG | 0.510168 | 3_3:-66346753 | None:intergenic |
| GTAATCAACGGTGGCGACAC+TGG | 0.516736 | 3_3:-66347414 | None:intergenic |
| CTGATTGACTTGTTTCGACA+GGG | 0.520253 | 3_3:-66347095 | None:intergenic |
| CGGTTGTTCCGGATGAGAAG+AGG | 0.520963 | 3_3:-66347131 | None:intergenic |
| GGGGTAAGTGAGGTGGTGGT+CGG | 0.523850 | 3_3:-66346734 | None:intergenic |
| TATTTCTCCCTCCTCTCCCT+CGG | 0.524784 | 3_3:+66346871 | Msa0465880:CDS |
| TCGATTCGGTTGTTGGGGAG+CGG | 0.526443 | 3_3:+66347480 | Msa0465880:CDS |
| TCTCGTTCATCTCATCAATC+CGG | 0.528177 | 3_3:+66346945 | Msa0465880:CDS |
| GGTCGGTAGCGGCGTCGATG+AGG | 0.529692 | 3_3:-66346717 | None:intergenic |
| TTGAACACGGAAAGAAAAGA+AGG | 0.530918 | 3_3:-66347042 | None:intergenic |
| AGAGGGATTTGATTTGGCGG+AGG | 0.532523 | 3_3:-66346762 | None:intergenic |
| AACTTCATCGCTTTAATCGG+AGG | 0.533711 | 3_3:+66347186 | Msa0465880:CDS |
| CTATGGTGACACCGAGGGAG+AGG | 0.534025 | 3_3:-66346882 | None:intergenic |
| ACGGGGACGTGTATGGAAGA+AGG | 0.536690 | 3_3:-66346844 | None:intergenic |
| GGCGTTTACTAAGTCGGAGT+TGG | 0.537296 | 3_3:+66347437 | Msa0465880:CDS |
| AGGAGGGAGAAATAGAGTAC+GGG | 0.537451 | 3_3:-66346862 | None:intergenic |
| AGGTGGGGTAAGTGAGGTGG+TGG | 0.539145 | 3_3:-66346738 | None:intergenic |
| CGTGTATGGAAGAAGGGATG+AGG | 0.540128 | 3_3:-66346837 | None:intergenic |
| TCTGGAATGAGAGCAGTAAC+CGG | 0.540479 | 3_3:-66346575 | None:intergenic |
| AGCGGCGTCGATGAGGGCGG+TGG | 0.541086 | 3_3:-66346710 | None:intergenic |
| AGAGAGTAGTGTGTGATTGG+AGG | 0.542341 | 3_3:-66346792 | None:intergenic |
| GAGGAGAGAGAGTGCATAGT+CGG | 0.547879 | 3_3:-66346659 | None:intergenic |
| CGGGGACGTGTATGGAAGAA+GGG | 0.551028 | 3_3:-66346843 | None:intergenic |
| GCATAGTCGGCGAGGGAGAG+AGG | 0.551454 | 3_3:-66346646 | None:intergenic |
| TGACGGCGGTGGTGGTGGAG+AGG | 0.558240 | 3_3:-66346678 | None:intergenic |
| CGAGATGAGATAACTCTGAA+GGG | 0.560743 | 3_3:-66346927 | None:intergenic |
| TGGTGACACCGAGGGAGAGG+AGG | 0.566172 | 3_3:-66346879 | None:intergenic |
| ACTCTGAAGGGGAGGAGAGT+GGG | 0.573844 | 3_3:-66346915 | None:intergenic |
| GGAACAACCGGACGAGTCAA+AGG | 0.573988 | 3_3:+66347144 | Msa0465880:CDS |
| TTAGTAAACGCCGTAATCAA+CGG | 0.575095 | 3_3:-66347426 | None:intergenic |
| ACCGGTGTTTGGGTCGATTG+TGG | 0.575528 | 3_3:-66346557 | None:intergenic |
| ATCAGTTACGACAGTGCCAA+GGG | 0.575867 | 3_3:-66347016 | None:intergenic |
| GGTGACACCGAGGGAGAGGA+GGG | 0.577747 | 3_3:-66346878 | None:intergenic |
| CAGTGCCAAGGGGTAGTTTG+GGG | 0.579097 | 3_3:-66347005 | None:intergenic |
| ACGAGATGAGATAACTCTGA+AGG | 0.580156 | 3_3:-66346928 | None:intergenic |
| AACTCTGAAGGGGAGGAGAG+TGG | 0.581496 | 3_3:-66346916 | None:intergenic |
| GGTGTTTGGGTCGATTGTGG+TGG | 0.582718 | 3_3:-66346554 | None:intergenic |
| ATTCGGTTGTTGGGGAGCGG+TGG | 0.584180 | 3_3:+66347483 | Msa0465880:CDS |
| GGCGAGGGAGAGAGGTTGGG+AGG | 0.584810 | 3_3:-66346638 | None:intergenic |
| GCGAGGGAGAGAGGTTGGGA+GGG | 0.589278 | 3_3:-66346637 | None:intergenic |
| GAGAGAGTGCATAGTCGGCG+AGG | 0.591049 | 3_3:-66346654 | None:intergenic |
| AGAGAGTGCATAGTCGGCGA+GGG | 0.591762 | 3_3:-66346653 | None:intergenic |
| AAAATCCCCAAACTACCCCT+TGG | 0.592785 | 3_3:+66347000 | Msa0465880:CDS |
| GATTACGGCGTTTACTAAGT+CGG | 0.593273 | 3_3:+66347431 | Msa0465880:CDS |
| GGAAACAACGACACCGGATG+CGG | 0.595570 | 3_3:-66347255 | None:intergenic |
| AATCAGTTACGACAGTGCCA+AGG | 0.597190 | 3_3:-66347017 | None:intergenic |
| GGTGGTGTTGTTGGTGACGG+CGG | 0.601529 | 3_3:-66346692 | None:intergenic |
| TGACTGTGTTACAGTGTGGT+TGG | 0.602910 | 3_3:-66346527 | None:intergenic |
| AGGAGCTATGGTGACACCGA+GGG | 0.608016 | 3_3:-66346887 | None:intergenic |
| TTAGTTCGATTCGGTTGTTG+GGG | 0.609605 | 3_3:+66347475 | Msa0465880:CDS |
| ATGAGATAACTCTGAAGGGG+AGG | 0.614560 | 3_3:-66346923 | None:intergenic |
| GGTAGCGGCGTCGATGAGGG+CGG | 0.617002 | 3_3:-66346713 | None:intergenic |
| AAGTTCGGTATCAGTATCAA+CGG | 0.617012 | 3_3:-66347070 | None:intergenic |
| TCCGCAACCTCCTTCCCAAG+CGG | 0.626066 | 3_3:-66347510 | None:intergenic |
| AGACGTTGGTGATGATGCAG+AGG | 0.629831 | 3_3:+66347337 | Msa0465880:CDS |
| ACCACAATCGACCCAAACAC+CGG | 0.630252 | 3_3:+66346556 | Msa0465880:CDS |
| AAAGGAGTATTATTAACTCA+CGG | 0.632386 | 3_3:+66347162 | Msa0465880:CDS |
| TGGTGAGAGCTTTGGCCATG+GGG | 0.633827 | 3_3:+66347313 | Msa0465880:CDS |
| CCTGCACAATTTCCACATTG+GGG | 0.635844 | 3_3:-66347551 | None:intergenic |
| GGAAGCGGAAACAACGACAC+CGG | 0.643897 | 3_3:-66347261 | None:intergenic |
| TGATTGGAGGAATGAAGAGA+GGG | 0.650390 | 3_3:-66346779 | None:intergenic |
| GTGATTGGAGGAATGAAGAG+AGG | 0.652386 | 3_3:-66346780 | None:intergenic |
| GGTGAGAGCTTTGGCCATGG+GGG | 0.656509 | 3_3:+66347314 | Msa0465880:CDS |
| GAGATGAGATAACTCTGAAG+GGG | 0.663184 | 3_3:-66346926 | None:intergenic |
| CAAAGCTAAATTCCCCAATG+TGG | 0.668229 | 3_3:+66347539 | Msa0465880:CDS |
| GGAGGGAGAAATAGAGTACG+GGG | 0.671555 | 3_3:-66346861 | None:intergenic |
| TCACACACTACTCTCTCCAA+AGG | 0.673470 | 3_3:+66346799 | Msa0465880:CDS |
| TTCGGTATCAGTATCAACGG+TGG | 0.683288 | 3_3:-66347067 | None:intergenic |
| ATCAACGGTGGAATTGAACA+CGG | 0.689055 | 3_3:-66347055 | None:intergenic |
| GGATGAGGATGAGAGCGATG+TGG | 0.692251 | 3_3:-66346822 | None:intergenic |
| CAGGAGCTATGGTGACACCG+AGG | 0.699047 | 3_3:-66346888 | None:intergenic |
| GTAAACGCCGTAATCAACGG+TGG | 0.747593 | 3_3:-66347423 | None:intergenic |
| TCAGTTACGACAGTGCCAAG+GGG | 0.751020 | 3_3:-66347015 | None:intergenic |
| AGTGTGACTGTGTTACAGTG+TGG | 0.753566 | 3_3:-66346531 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATAATTAAAAAACAGAAGT+GGG | - | chr3_3:66347593-66347612 | None:intergenic | 20.0% |
| !! | TGATAATTAAAAAACAGAAG+TGG | - | chr3_3:66347594-66347613 | None:intergenic | 20.0% |
| !!! | TCACAAACAATAAAGAATTT+TGG | + | chr3_3:66348214-66348233 | Msa0465880:intron | 20.0% |
| !!! | ACCTTAATTTAAGTTTCATT+TGG | + | chr3_3:66348271-66348290 | Msa0465880:intron | 20.0% |
| !!! | CCTTAATTTAAGTTTCATTT+GGG | + | chr3_3:66348272-66348291 | Msa0465880:intron | 20.0% |
| !!! | CTTAATTTAAGTTTCATTTG+GGG | + | chr3_3:66348273-66348292 | Msa0465880:intron | 20.0% |
| !! | GATAATTAAAAAACAGAAGT+GGG | - | chr3_3:66347593-66347612 | None:intergenic | 20.0% |
| !! | TGATAATTAAAAAACAGAAG+TGG | - | chr3_3:66347594-66347613 | None:intergenic | 20.0% |
| !!! | TCACAAACAATAAAGAATTT+TGG | + | chr3_3:66348214-66348233 | Msa0465880:intron | 20.0% |
| !!! | ACCTTAATTTAAGTTTCATT+TGG | + | chr3_3:66348271-66348290 | Msa0465880:intron | 20.0% |
| !!! | CCTTAATTTAAGTTTCATTT+GGG | + | chr3_3:66348272-66348291 | Msa0465880:intron | 20.0% |
| !!! | CTTAATTTAAGTTTCATTTG+GGG | + | chr3_3:66348273-66348292 | Msa0465880:intron | 20.0% |
| !!! | AAAGGAGTATTATTAACTCA+CGG | + | chr3_3:66347162-66347181 | Msa0465880:CDS | 25.0% |
| !!! | TGTGTTTGGATTTTTTATGA+TGG | + | chr3_3:66347293-66347312 | Msa0465880:CDS | 25.0% |
| ! | AGTATGATATTAGTTCGATT+CGG | + | chr3_3:66347466-66347485 | Msa0465880:CDS | 25.0% |
| ! | AAACGAAATTACTGTTCAAA+AGG | - | chr3_3:66347807-66347826 | None:intergenic | 25.0% |
| ! | TGAACAGTAATTTCGTTTAA+AGG | + | chr3_3:66347809-66347828 | Msa0465880:intron | 25.0% |
| ! | TTCTTATTGGTCAAAAACAA+TGG | - | chr3_3:66348010-66348029 | None:intergenic | 25.0% |
| !!! | TTGTTTTTGTCACTTCTTAT+TGG | - | chr3_3:66348023-66348042 | None:intergenic | 25.0% |
| ! | AATAAGAAGTGACAAAAACA+AGG | + | chr3_3:66348022-66348041 | Msa0465880:intron | 25.0% |
| !! | CAATAAAGAATTTTGGACAT+AGG | + | chr3_3:66348221-66348240 | Msa0465880:intron | 25.0% |
| ! | CCCAAATGAAACTTAAATTA+AGG | - | chr3_3:66348275-66348294 | None:intergenic | 25.0% |
| !!! | AAAGGAGTATTATTAACTCA+CGG | + | chr3_3:66347162-66347181 | Msa0465880:CDS | 25.0% |
| !!! | TGTGTTTGGATTTTTTATGA+TGG | + | chr3_3:66347293-66347312 | Msa0465880:CDS | 25.0% |
| ! | AGTATGATATTAGTTCGATT+CGG | + | chr3_3:66347466-66347485 | Msa0465880:CDS | 25.0% |
| ! | AAACGAAATTACTGTTCAAA+AGG | - | chr3_3:66347807-66347826 | None:intergenic | 25.0% |
| ! | TGAACAGTAATTTCGTTTAA+AGG | + | chr3_3:66347809-66347828 | Msa0465880:intron | 25.0% |
| ! | TTCTTATTGGTCAAAAACAA+TGG | - | chr3_3:66348010-66348029 | None:intergenic | 25.0% |
| !!! | TTGTTTTTGTCACTTCTTAT+TGG | - | chr3_3:66348023-66348042 | None:intergenic | 25.0% |
| ! | AATAAGAAGTGACAAAAACA+AGG | + | chr3_3:66348022-66348041 | Msa0465880:intron | 25.0% |
| !! | CAATAAAGAATTTTGGACAT+AGG | + | chr3_3:66348221-66348240 | Msa0465880:intron | 25.0% |
| ! | CCCAAATGAAACTTAAATTA+AGG | - | chr3_3:66348275-66348294 | None:intergenic | 25.0% |
| AATCCAAACACATGAAAAAG+CGG | - | chr3_3:66347285-66347304 | None:intergenic | 30.0% | |
| AATTAAAAAACAGAAGTGGG+TGG | - | chr3_3:66347590-66347609 | None:intergenic | 30.0% | |
| AAAACAATGGAGAGAGAAAA+AGG | - | chr3_3:66347997-66348016 | None:intergenic | 30.0% | |
| ATGAGATATGCTTCTTTACA+CGG | + | chr3_3:66348147-66348166 | Msa0465880:intron | 30.0% | |
| ! | AATTTAAGTTTCATTTGGGG+AGG | + | chr3_3:66348276-66348295 | Msa0465880:intron | 30.0% |
| AATCCAAACACATGAAAAAG+CGG | - | chr3_3:66347285-66347304 | None:intergenic | 30.0% | |
| AATTAAAAAACAGAAGTGGG+TGG | - | chr3_3:66347590-66347609 | None:intergenic | 30.0% | |
| AAAACAATGGAGAGAGAAAA+AGG | - | chr3_3:66347997-66348016 | None:intergenic | 30.0% | |
| ATGAGATATGCTTCTTTACA+CGG | + | chr3_3:66348147-66348166 | Msa0465880:intron | 30.0% | |
| ! | AATTTAAGTTTCATTTGGGG+AGG | + | chr3_3:66348276-66348295 | Msa0465880:intron | 30.0% |
| ATGAAGAGAGGGATTTGATT+TGG | - | chr3_3:66346771-66346790 | None:intergenic | 35.0% | |
| TTGAACACGGAAAGAAAAGA+AGG | - | chr3_3:66347045-66347064 | None:intergenic | 35.0% | |
| AAGTTCGGTATCAGTATCAA+CGG | - | chr3_3:66347073-66347092 | None:intergenic | 35.0% | |
| GGTAACTTCATCGCTTTAAT+CGG | + | chr3_3:66347183-66347202 | Msa0465880:CDS | 35.0% | |
| !! | TTTTATGATGGTGAGAGCTT+TGG | + | chr3_3:66347305-66347324 | Msa0465880:CDS | 35.0% |
| !! | ATGCAGAGGTTTGATTTTGA+AGG | + | chr3_3:66347351-66347370 | Msa0465880:CDS | 35.0% |
| !! | TGCAGAGGTTTGATTTTGAA+GGG | + | chr3_3:66347352-66347371 | Msa0465880:CDS | 35.0% |
| !! | TGATTTTGAAGGGATGTTGA+AGG | + | chr3_3:66347362-66347381 | Msa0465880:CDS | 35.0% |
| TTAGTAAACGCCGTAATCAA+CGG | - | chr3_3:66347429-66347448 | None:intergenic | 35.0% | |
| !! | TATTAGTTCGATTCGGTTGT+TGG | + | chr3_3:66347473-66347492 | Msa0465880:CDS | 35.0% |
| !! | ATTAGTTCGATTCGGTTGTT+GGG | + | chr3_3:66347474-66347493 | Msa0465880:CDS | 35.0% |
| GTAGAAAGATCATATAGACG+AGG | - | chr3_3:66347653-66347672 | None:intergenic | 35.0% | |
| GAGAGAAAGTTGTCAAAAAG+TGG | - | chr3_3:66347941-66347960 | None:intergenic | 35.0% | |
| GTCAACAAAGTTGTCATCAA+TGG | + | chr3_3:66348047-66348066 | Msa0465880:intron | 35.0% | |
| ATGAAGAGAGGGATTTGATT+TGG | - | chr3_3:66346771-66346790 | None:intergenic | 35.0% | |
| TTGAACACGGAAAGAAAAGA+AGG | - | chr3_3:66347045-66347064 | None:intergenic | 35.0% | |
| AAGTTCGGTATCAGTATCAA+CGG | - | chr3_3:66347073-66347092 | None:intergenic | 35.0% | |
| GGTAACTTCATCGCTTTAAT+CGG | + | chr3_3:66347183-66347202 | Msa0465880:CDS | 35.0% | |
| !! | TTTTATGATGGTGAGAGCTT+TGG | + | chr3_3:66347305-66347324 | Msa0465880:CDS | 35.0% |
| !! | ATGCAGAGGTTTGATTTTGA+AGG | + | chr3_3:66347351-66347370 | Msa0465880:CDS | 35.0% |
| !! | TGCAGAGGTTTGATTTTGAA+GGG | + | chr3_3:66347352-66347371 | Msa0465880:CDS | 35.0% |
| !! | TGATTTTGAAGGGATGTTGA+AGG | + | chr3_3:66347362-66347381 | Msa0465880:CDS | 35.0% |
| TTAGTAAACGCCGTAATCAA+CGG | - | chr3_3:66347429-66347448 | None:intergenic | 35.0% | |
| !! | TATTAGTTCGATTCGGTTGT+TGG | + | chr3_3:66347473-66347492 | Msa0465880:CDS | 35.0% |
| !! | ATTAGTTCGATTCGGTTGTT+GGG | + | chr3_3:66347474-66347493 | Msa0465880:CDS | 35.0% |
| GTAGAAAGATCATATAGACG+AGG | - | chr3_3:66347653-66347672 | None:intergenic | 35.0% | |
| GAGAGAAAGTTGTCAAAAAG+TGG | - | chr3_3:66347941-66347960 | None:intergenic | 35.0% | |
| GTCAACAAAGTTGTCATCAA+TGG | + | chr3_3:66348047-66348066 | Msa0465880:intron | 35.0% | |
| ! | TGTTACAGTGTGGTTGGTAT+TGG | - | chr3_3:66346524-66346543 | None:intergenic | 40.0% |
| !! | AAGAGAGGGATTTGATTTGG+CGG | - | chr3_3:66346768-66346787 | None:intergenic | 40.0% |
| TGATTGGAGGAATGAAGAGA+GGG | - | chr3_3:66346782-66346801 | None:intergenic | 40.0% | |
| ! | GAGATGAGATAACTCTGAAG+GGG | - | chr3_3:66346929-66346948 | None:intergenic | 40.0% |
| CGAGATGAGATAACTCTGAA+GGG | - | chr3_3:66346930-66346949 | None:intergenic | 40.0% | |
| ACGAGATGAGATAACTCTGA+AGG | - | chr3_3:66346931-66346950 | None:intergenic | 40.0% | |
| TCTCGTTCATCTCATCAATC+CGG | + | chr3_3:66346945-66346964 | Msa0465880:CDS | 40.0% | |
| ATCAACGGTGGAATTGAACA+CGG | - | chr3_3:66347058-66347077 | None:intergenic | 40.0% | |
| !! | CTGATTGACTTGTTTCGACA+GGG | - | chr3_3:66347098-66347117 | None:intergenic | 40.0% |
| !! | TCTGATTGACTTGTTTCGAC+AGG | - | chr3_3:66347099-66347118 | None:intergenic | 40.0% |
| ! | TAATACTCCTTTGACTCGTC+CGG | - | chr3_3:66347154-66347173 | None:intergenic | 40.0% |
| AACTTCATCGCTTTAATCGG+AGG | + | chr3_3:66347186-66347205 | Msa0465880:CDS | 40.0% | |
| AACACATGAAAAAGCGGAAG+CGG | - | chr3_3:66347279-66347298 | None:intergenic | 40.0% | |
| !!! | CTTCCGCTTTTTCATGTGTT+TGG | + | chr3_3:66347279-66347298 | Msa0465880:CDS | 40.0% |
| !! | TTTTGAAGGGATGTTGAAGG+CGG | + | chr3_3:66347365-66347384 | Msa0465880:CDS | 40.0% |
| GATTACGGCGTTTACTAAGT+CGG | + | chr3_3:66347431-66347450 | Msa0465880:CDS | 40.0% | |
| !! | TTAGTTCGATTCGGTTGTTG+GGG | + | chr3_3:66347475-66347494 | Msa0465880:CDS | 40.0% |
| CAAAGCTAAATTCCCCAATG+TGG | + | chr3_3:66347539-66347558 | Msa0465880:CDS | 40.0% | |
| ACCTGCACAATTTCCACATT+GGG | - | chr3_3:66347555-66347574 | None:intergenic | 40.0% | |
| AACCTGCACAATTTCCACAT+TGG | - | chr3_3:66347556-66347575 | None:intergenic | 40.0% | |
| ACTACTGCTATTGTTGCCTT+CGG | + | chr3_3:66347622-66347641 | Msa0465880:intron | 40.0% | |
| AGAGAGAAAAAGGAAGAGAG+AGG | - | chr3_3:66347987-66348006 | None:intergenic | 40.0% | |
| !! | GTTTGTTGTCATTGCCTCAT+TGG | + | chr3_3:66348172-66348191 | Msa0465880:intron | 40.0% |
| GTCACTATATGCATCCAATG+AGG | - | chr3_3:66348189-66348208 | None:intergenic | 40.0% | |
| ! | TGTTACAGTGTGGTTGGTAT+TGG | - | chr3_3:66346524-66346543 | None:intergenic | 40.0% |
| !! | AAGAGAGGGATTTGATTTGG+CGG | - | chr3_3:66346768-66346787 | None:intergenic | 40.0% |
| TGATTGGAGGAATGAAGAGA+GGG | - | chr3_3:66346782-66346801 | None:intergenic | 40.0% | |
| ! | GAGATGAGATAACTCTGAAG+GGG | - | chr3_3:66346929-66346948 | None:intergenic | 40.0% |
| CGAGATGAGATAACTCTGAA+GGG | - | chr3_3:66346930-66346949 | None:intergenic | 40.0% | |
| ACGAGATGAGATAACTCTGA+AGG | - | chr3_3:66346931-66346950 | None:intergenic | 40.0% | |
| TCTCGTTCATCTCATCAATC+CGG | + | chr3_3:66346945-66346964 | Msa0465880:CDS | 40.0% | |
| ATCAACGGTGGAATTGAACA+CGG | - | chr3_3:66347058-66347077 | None:intergenic | 40.0% | |
| !! | CTGATTGACTTGTTTCGACA+GGG | - | chr3_3:66347098-66347117 | None:intergenic | 40.0% |
| !! | TCTGATTGACTTGTTTCGAC+AGG | - | chr3_3:66347099-66347118 | None:intergenic | 40.0% |
| ! | TAATACTCCTTTGACTCGTC+CGG | - | chr3_3:66347154-66347173 | None:intergenic | 40.0% |
| AACTTCATCGCTTTAATCGG+AGG | + | chr3_3:66347186-66347205 | Msa0465880:CDS | 40.0% | |
| AACACATGAAAAAGCGGAAG+CGG | - | chr3_3:66347279-66347298 | None:intergenic | 40.0% | |
| !!! | CTTCCGCTTTTTCATGTGTT+TGG | + | chr3_3:66347279-66347298 | Msa0465880:CDS | 40.0% |
| !! | TTTTGAAGGGATGTTGAAGG+CGG | + | chr3_3:66347365-66347384 | Msa0465880:CDS | 40.0% |
| GATTACGGCGTTTACTAAGT+CGG | + | chr3_3:66347431-66347450 | Msa0465880:CDS | 40.0% | |
| !! | TTAGTTCGATTCGGTTGTTG+GGG | + | chr3_3:66347475-66347494 | Msa0465880:CDS | 40.0% |
| CAAAGCTAAATTCCCCAATG+TGG | + | chr3_3:66347539-66347558 | Msa0465880:CDS | 40.0% | |
| ACCTGCACAATTTCCACATT+GGG | - | chr3_3:66347555-66347574 | None:intergenic | 40.0% | |
| AACCTGCACAATTTCCACAT+TGG | - | chr3_3:66347556-66347575 | None:intergenic | 40.0% | |
| ACTACTGCTATTGTTGCCTT+CGG | + | chr3_3:66347622-66347641 | Msa0465880:intron | 40.0% | |
| AGAGAGAAAAAGGAAGAGAG+AGG | - | chr3_3:66347987-66348006 | None:intergenic | 40.0% | |
| !! | GTTTGTTGTCATTGCCTCAT+TGG | + | chr3_3:66348172-66348191 | Msa0465880:intron | 40.0% |
| GTCACTATATGCATCCAATG+AGG | - | chr3_3:66348189-66348208 | None:intergenic | 40.0% | |
| TGACTGTGTTACAGTGTGGT+TGG | - | chr3_3:66346530-66346549 | None:intergenic | 45.0% | |
| AGTGTGACTGTGTTACAGTG+TGG | - | chr3_3:66346534-66346553 | None:intergenic | 45.0% | |
| ! | TCTGGAATGAGAGCAGTAAC+CGG | - | chr3_3:66346578-66346597 | None:intergenic | 45.0% |
| GTGATTGGAGGAATGAAGAG+AGG | - | chr3_3:66346783-66346802 | None:intergenic | 45.0% | |
| AGAGAGTAGTGTGTGATTGG+AGG | - | chr3_3:66346795-66346814 | None:intergenic | 45.0% | |
| TGGAGAGAGTAGTGTGTGAT+TGG | - | chr3_3:66346798-66346817 | None:intergenic | 45.0% | |
| TCACACACTACTCTCTCCAA+AGG | + | chr3_3:66346799-66346818 | Msa0465880:CDS | 45.0% | |
| AGGAGGGAGAAATAGAGTAC+GGG | - | chr3_3:66346865-66346884 | None:intergenic | 45.0% | |
| GAGGAGGGAGAAATAGAGTA+CGG | - | chr3_3:66346866-66346885 | None:intergenic | 45.0% | |
| ! | ATGAGATAACTCTGAAGGGG+AGG | - | chr3_3:66346926-66346945 | None:intergenic | 45.0% |
| ! | TTTTGTTGCAGTTGAGGACG+TGG | - | chr3_3:66346983-66347002 | None:intergenic | 45.0% |
| ! | GGGGATTTTTGTTGCAGTTG+AGG | - | chr3_3:66346989-66347008 | None:intergenic | 45.0% |
| AAAATCCCCAAACTACCCCT+TGG | + | chr3_3:66347000-66347019 | Msa0465880:CDS | 45.0% | |
| ATCAGTTACGACAGTGCCAA+GGG | - | chr3_3:66347019-66347038 | None:intergenic | 45.0% | |
| AATCAGTTACGACAGTGCCA+AGG | - | chr3_3:66347020-66347039 | None:intergenic | 45.0% | |
| TTCGGTATCAGTATCAACGG+TGG | - | chr3_3:66347070-66347089 | None:intergenic | 45.0% | |
| GATTGAAGATGAACCGCATC+CGG | + | chr3_3:66347242-66347261 | Msa0465880:CDS | 45.0% | |
| ! | TGAAGGCGGTTGAGAAGTAT+AGG | + | chr3_3:66347379-66347398 | Msa0465880:CDS | 45.0% |
| CCTGCACAATTTCCACATTG+GGG | - | chr3_3:66347554-66347573 | None:intergenic | 45.0% | |
| TGACTGTGTTACAGTGTGGT+TGG | - | chr3_3:66346530-66346549 | None:intergenic | 45.0% | |
| AGTGTGACTGTGTTACAGTG+TGG | - | chr3_3:66346534-66346553 | None:intergenic | 45.0% | |
| ! | TCTGGAATGAGAGCAGTAAC+CGG | - | chr3_3:66346578-66346597 | None:intergenic | 45.0% |
| GTGATTGGAGGAATGAAGAG+AGG | - | chr3_3:66346783-66346802 | None:intergenic | 45.0% | |
| AGAGAGTAGTGTGTGATTGG+AGG | - | chr3_3:66346795-66346814 | None:intergenic | 45.0% | |
| TGGAGAGAGTAGTGTGTGAT+TGG | - | chr3_3:66346798-66346817 | None:intergenic | 45.0% | |
| TCACACACTACTCTCTCCAA+AGG | + | chr3_3:66346799-66346818 | Msa0465880:CDS | 45.0% | |
| AGGAGGGAGAAATAGAGTAC+GGG | - | chr3_3:66346865-66346884 | None:intergenic | 45.0% | |
| GAGGAGGGAGAAATAGAGTA+CGG | - | chr3_3:66346866-66346885 | None:intergenic | 45.0% | |
| ! | ATGAGATAACTCTGAAGGGG+AGG | - | chr3_3:66346926-66346945 | None:intergenic | 45.0% |
| ! | TTTTGTTGCAGTTGAGGACG+TGG | - | chr3_3:66346983-66347002 | None:intergenic | 45.0% |
| ! | GGGGATTTTTGTTGCAGTTG+AGG | - | chr3_3:66346989-66347008 | None:intergenic | 45.0% |
| AAAATCCCCAAACTACCCCT+TGG | + | chr3_3:66347000-66347019 | Msa0465880:CDS | 45.0% | |
| ATCAGTTACGACAGTGCCAA+GGG | - | chr3_3:66347019-66347038 | None:intergenic | 45.0% | |
| AATCAGTTACGACAGTGCCA+AGG | - | chr3_3:66347020-66347039 | None:intergenic | 45.0% | |
| TTCGGTATCAGTATCAACGG+TGG | - | chr3_3:66347070-66347089 | None:intergenic | 45.0% | |
| GATTGAAGATGAACCGCATC+CGG | + | chr3_3:66347242-66347261 | Msa0465880:CDS | 45.0% | |
| ! | TGAAGGCGGTTGAGAAGTAT+AGG | + | chr3_3:66347379-66347398 | Msa0465880:CDS | 45.0% |
| CCTGCACAATTTCCACATTG+GGG | - | chr3_3:66347554-66347573 | None:intergenic | 45.0% | |
| ACCACAATCGACCCAAACAC+CGG | + | chr3_3:66346556-66346575 | Msa0465880:CDS | 50.0% | |
| GAGAGCAGTAACCGGTGTTT+GGG | - | chr3_3:66346570-66346589 | None:intergenic | 50.0% | |
| TGAGAGCAGTAACCGGTGTT+TGG | - | chr3_3:66346571-66346590 | None:intergenic | 50.0% | |
| ! | GAGGAGAGAGAGTGCATAGT+CGG | - | chr3_3:66346662-66346681 | None:intergenic | 50.0% |
| !! | TTGATTTGGCGGAGGAAGGT+GGG | - | chr3_3:66346757-66346776 | None:intergenic | 50.0% |
| !! | TTTGATTTGGCGGAGGAAGG+TGG | - | chr3_3:66346758-66346777 | None:intergenic | 50.0% |
| !! | GGATTTGATTTGGCGGAGGA+AGG | - | chr3_3:66346761-66346780 | None:intergenic | 50.0% |
| !! | AGAGGGATTTGATTTGGCGG+AGG | - | chr3_3:66346765-66346784 | None:intergenic | 50.0% |
| CGTGTATGGAAGAAGGGATG+AGG | - | chr3_3:66346840-66346859 | None:intergenic | 50.0% | |
| ATAGAGTACGGGGACGTGTA+TGG | - | chr3_3:66346854-66346873 | None:intergenic | 50.0% | |
| GGAGGGAGAAATAGAGTACG+GGG | - | chr3_3:66346864-66346883 | None:intergenic | 50.0% | |
| TATTTCTCCCTCCTCTCCCT+CGG | + | chr3_3:66346871-66346890 | Msa0465880:CDS | 50.0% | |
| ACAGTGCCAAGGGGTAGTTT+GGG | - | chr3_3:66347009-66347028 | None:intergenic | 50.0% | |
| TCAGTTACGACAGTGCCAAG+GGG | - | chr3_3:66347018-66347037 | None:intergenic | 50.0% | |
| TGTTTCGACAGGGCGAAGTT+CGG | - | chr3_3:66347088-66347107 | None:intergenic | 50.0% | |
| GCAGCAATCCTCTTCTCATC+CGG | + | chr3_3:66347123-66347142 | Msa0465880:CDS | 50.0% | |
| CTCTTCTCATCCGGAACAAC+CGG | + | chr3_3:66347132-66347151 | Msa0465880:CDS | 50.0% | |
| ! | TTTGACTCGTCCGGTTGTTC+CGG | - | chr3_3:66347145-66347164 | None:intergenic | 50.0% |
| CTGAAGCACGCGTATGATGA+CGG | + | chr3_3:66347219-66347238 | Msa0465880:CDS | 50.0% | |
| TGAAGCACGCGTATGATGAC+GGG | + | chr3_3:66347220-66347239 | Msa0465880:CDS | 50.0% | |
| ! | ATGGTGAGAGCTTTGGCCAT+GGG | + | chr3_3:66347312-66347331 | Msa0465880:CDS | 50.0% |
| !! | AGACGTTGGTGATGATGCAG+AGG | + | chr3_3:66347337-66347356 | Msa0465880:CDS | 50.0% |
| ! | AGTGTCGCCACCGTTGATTA+CGG | + | chr3_3:66347416-66347435 | Msa0465880:CDS | 50.0% |
| GTAAACGCCGTAATCAACGG+TGG | - | chr3_3:66347426-66347445 | None:intergenic | 50.0% | |
| GGCGTTTACTAAGTCGGAGT+TGG | + | chr3_3:66347437-66347456 | Msa0465880:CDS | 50.0% | |
| CCCCAATGTGGAAATTGTGC+AGG | + | chr3_3:66347551-66347570 | Msa0465880:CDS | 50.0% | |
| TATAGACGAGGACACTCCGA+AGG | - | chr3_3:66347641-66347660 | None:intergenic | 50.0% | |
| ACCACAATCGACCCAAACAC+CGG | + | chr3_3:66346556-66346575 | Msa0465880:CDS | 50.0% | |
| GAGAGCAGTAACCGGTGTTT+GGG | - | chr3_3:66346570-66346589 | None:intergenic | 50.0% | |
| TGAGAGCAGTAACCGGTGTT+TGG | - | chr3_3:66346571-66346590 | None:intergenic | 50.0% | |
| ! | GAGGAGAGAGAGTGCATAGT+CGG | - | chr3_3:66346662-66346681 | None:intergenic | 50.0% |
| !! | TTGATTTGGCGGAGGAAGGT+GGG | - | chr3_3:66346757-66346776 | None:intergenic | 50.0% |
| !! | TTTGATTTGGCGGAGGAAGG+TGG | - | chr3_3:66346758-66346777 | None:intergenic | 50.0% |
| !! | GGATTTGATTTGGCGGAGGA+AGG | - | chr3_3:66346761-66346780 | None:intergenic | 50.0% |
| !! | AGAGGGATTTGATTTGGCGG+AGG | - | chr3_3:66346765-66346784 | None:intergenic | 50.0% |
| CGTGTATGGAAGAAGGGATG+AGG | - | chr3_3:66346840-66346859 | None:intergenic | 50.0% | |
| ATAGAGTACGGGGACGTGTA+TGG | - | chr3_3:66346854-66346873 | None:intergenic | 50.0% | |
| GGAGGGAGAAATAGAGTACG+GGG | - | chr3_3:66346864-66346883 | None:intergenic | 50.0% | |
| TATTTCTCCCTCCTCTCCCT+CGG | + | chr3_3:66346871-66346890 | Msa0465880:CDS | 50.0% | |
| ACAGTGCCAAGGGGTAGTTT+GGG | - | chr3_3:66347009-66347028 | None:intergenic | 50.0% | |
| TCAGTTACGACAGTGCCAAG+GGG | - | chr3_3:66347018-66347037 | None:intergenic | 50.0% | |
| TGTTTCGACAGGGCGAAGTT+CGG | - | chr3_3:66347088-66347107 | None:intergenic | 50.0% | |
| GCAGCAATCCTCTTCTCATC+CGG | + | chr3_3:66347123-66347142 | Msa0465880:CDS | 50.0% | |
| CTCTTCTCATCCGGAACAAC+CGG | + | chr3_3:66347132-66347151 | Msa0465880:CDS | 50.0% | |
| ! | TTTGACTCGTCCGGTTGTTC+CGG | - | chr3_3:66347145-66347164 | None:intergenic | 50.0% |
| CTGAAGCACGCGTATGATGA+CGG | + | chr3_3:66347219-66347238 | Msa0465880:CDS | 50.0% | |
| TGAAGCACGCGTATGATGAC+GGG | + | chr3_3:66347220-66347239 | Msa0465880:CDS | 50.0% | |
| ! | ATGGTGAGAGCTTTGGCCAT+GGG | + | chr3_3:66347312-66347331 | Msa0465880:CDS | 50.0% |
| !! | AGACGTTGGTGATGATGCAG+AGG | + | chr3_3:66347337-66347356 | Msa0465880:CDS | 50.0% |
| ! | AGTGTCGCCACCGTTGATTA+CGG | + | chr3_3:66347416-66347435 | Msa0465880:CDS | 50.0% |
| GTAAACGCCGTAATCAACGG+TGG | - | chr3_3:66347426-66347445 | None:intergenic | 50.0% | |
| GGCGTTTACTAAGTCGGAGT+TGG | + | chr3_3:66347437-66347456 | Msa0465880:CDS | 50.0% | |
| CCCCAATGTGGAAATTGTGC+AGG | + | chr3_3:66347551-66347570 | Msa0465880:CDS | 50.0% | |
| TATAGACGAGGACACTCCGA+AGG | - | chr3_3:66347641-66347660 | None:intergenic | 50.0% | |
| GGTGTTTGGGTCGATTGTGG+TGG | - | chr3_3:66346557-66346576 | None:intergenic | 55.0% | |
| ACCGGTGTTTGGGTCGATTG+TGG | - | chr3_3:66346560-66346579 | None:intergenic | 55.0% | |
| ! | AGAGAGTGCATAGTCGGCGA+GGG | - | chr3_3:66346656-66346675 | None:intergenic | 55.0% |
| ! | TGATTTGGCGGAGGAAGGTG+GGG | - | chr3_3:66346756-66346775 | None:intergenic | 55.0% |
| GATGAGAGCGATGTGGCCTT+TGG | - | chr3_3:66346818-66346837 | None:intergenic | 55.0% | |
| GGATGAGGATGAGAGCGATG+TGG | - | chr3_3:66346825-66346844 | None:intergenic | 55.0% | |
| CGGGGACGTGTATGGAAGAA+GGG | - | chr3_3:66346846-66346865 | None:intergenic | 55.0% | |
| ACGGGGACGTGTATGGAAGA+AGG | - | chr3_3:66346847-66346866 | None:intergenic | 55.0% | |
| AGGAGCTATGGTGACACCGA+GGG | - | chr3_3:66346890-66346909 | None:intergenic | 55.0% | |
| !! | GAGTGGGTTAGCAGGAGCTA+TGG | - | chr3_3:66346902-66346921 | None:intergenic | 55.0% |
| ! | ACTCTGAAGGGGAGGAGAGT+GGG | - | chr3_3:66346918-66346937 | None:intergenic | 55.0% |
| ! | AACTCTGAAGGGGAGGAGAG+TGG | - | chr3_3:66346919-66346938 | None:intergenic | 55.0% |
| GACGTGGAGAATGCGATGAC+CGG | - | chr3_3:66346967-66346986 | None:intergenic | 55.0% | |
| CAGTGCCAAGGGGTAGTTTG+GGG | - | chr3_3:66347008-66347027 | None:intergenic | 55.0% | |
| GACAGTGCCAAGGGGTAGTT+TGG | - | chr3_3:66347010-66347029 | None:intergenic | 55.0% | |
| CGGTTGTTCCGGATGAGAAG+AGG | - | chr3_3:66347134-66347153 | None:intergenic | 55.0% | |
| GGAACAACCGGACGAGTCAA+AGG | + | chr3_3:66347144-66347163 | Msa0465880:CDS | 55.0% | |
| CGTCATCATACGCGTGCTTC+AGG | - | chr3_3:66347221-66347240 | None:intergenic | 55.0% | |
| GGAAACAACGACACCGGATG+CGG | - | chr3_3:66347258-66347277 | None:intergenic | 55.0% | |
| GGAAGCGGAAACAACGACAC+CGG | - | chr3_3:66347264-66347283 | None:intergenic | 55.0% | |
| ! | GATGGTGAGAGCTTTGGCCA+TGG | + | chr3_3:66347311-66347330 | Msa0465880:CDS | 55.0% |
| ! | TGGTGAGAGCTTTGGCCATG+GGG | + | chr3_3:66347313-66347332 | Msa0465880:CDS | 55.0% |
| GTAATCAACGGTGGCGACAC+TGG | - | chr3_3:66347417-66347436 | None:intergenic | 55.0% | |
| !! | TCGATTCGGTTGTTGGGGAG+CGG | + | chr3_3:66347480-66347499 | Msa0465880:CDS | 55.0% |
| GGTGTTTGGGTCGATTGTGG+TGG | - | chr3_3:66346557-66346576 | None:intergenic | 55.0% | |
| ACCGGTGTTTGGGTCGATTG+TGG | - | chr3_3:66346560-66346579 | None:intergenic | 55.0% | |
| ! | AGAGAGTGCATAGTCGGCGA+GGG | - | chr3_3:66346656-66346675 | None:intergenic | 55.0% |
| ! | TGATTTGGCGGAGGAAGGTG+GGG | - | chr3_3:66346756-66346775 | None:intergenic | 55.0% |
| GATGAGAGCGATGTGGCCTT+TGG | - | chr3_3:66346818-66346837 | None:intergenic | 55.0% | |
| GGATGAGGATGAGAGCGATG+TGG | - | chr3_3:66346825-66346844 | None:intergenic | 55.0% | |
| CGGGGACGTGTATGGAAGAA+GGG | - | chr3_3:66346846-66346865 | None:intergenic | 55.0% | |
| ACGGGGACGTGTATGGAAGA+AGG | - | chr3_3:66346847-66346866 | None:intergenic | 55.0% | |
| AGGAGCTATGGTGACACCGA+GGG | - | chr3_3:66346890-66346909 | None:intergenic | 55.0% | |
| !! | GAGTGGGTTAGCAGGAGCTA+TGG | - | chr3_3:66346902-66346921 | None:intergenic | 55.0% |
| ! | ACTCTGAAGGGGAGGAGAGT+GGG | - | chr3_3:66346918-66346937 | None:intergenic | 55.0% |
| ! | AACTCTGAAGGGGAGGAGAG+TGG | - | chr3_3:66346919-66346938 | None:intergenic | 55.0% |
| GACGTGGAGAATGCGATGAC+CGG | - | chr3_3:66346967-66346986 | None:intergenic | 55.0% | |
| CAGTGCCAAGGGGTAGTTTG+GGG | - | chr3_3:66347008-66347027 | None:intergenic | 55.0% | |
| GACAGTGCCAAGGGGTAGTT+TGG | - | chr3_3:66347010-66347029 | None:intergenic | 55.0% | |
| CGGTTGTTCCGGATGAGAAG+AGG | - | chr3_3:66347134-66347153 | None:intergenic | 55.0% | |
| GGAACAACCGGACGAGTCAA+AGG | + | chr3_3:66347144-66347163 | Msa0465880:CDS | 55.0% | |
| CGTCATCATACGCGTGCTTC+AGG | - | chr3_3:66347221-66347240 | None:intergenic | 55.0% | |
| GGAAACAACGACACCGGATG+CGG | - | chr3_3:66347258-66347277 | None:intergenic | 55.0% | |
| GGAAGCGGAAACAACGACAC+CGG | - | chr3_3:66347264-66347283 | None:intergenic | 55.0% | |
| ! | GATGGTGAGAGCTTTGGCCA+TGG | + | chr3_3:66347311-66347330 | Msa0465880:CDS | 55.0% |
| ! | TGGTGAGAGCTTTGGCCATG+GGG | + | chr3_3:66347313-66347332 | Msa0465880:CDS | 55.0% |
| GTAATCAACGGTGGCGACAC+TGG | - | chr3_3:66347417-66347436 | None:intergenic | 55.0% | |
| !! | TCGATTCGGTTGTTGGGGAG+CGG | + | chr3_3:66347480-66347499 | Msa0465880:CDS | 55.0% |
| GTGGAGGAAGAGGGGCGATT+GGG | - | chr3_3:66346618-66346637 | None:intergenic | 60.0% | |
| TTGGGAGGGTGGAGGAAGAG+GGG | - | chr3_3:66346626-66346645 | None:intergenic | 60.0% | |
| GTTGGGAGGGTGGAGGAAGA+GGG | - | chr3_3:66346627-66346646 | None:intergenic | 60.0% | |
| ! | GAGAGAGTGCATAGTCGGCG+AGG | - | chr3_3:66346657-66346676 | None:intergenic | 60.0% |
| !! | GGTGGTGTTGTTGGTGACGG+CGG | - | chr3_3:66346695-66346714 | None:intergenic | 60.0% |
| !! | GGCGGTGGTGTTGTTGGTGA+CGG | - | chr3_3:66346698-66346717 | None:intergenic | 60.0% |
| !! | GATGAGGGCGGTGGTGTTGT+TGG | - | chr3_3:66346704-66346723 | None:intergenic | 60.0% |
| ! | AGTGAGGTGGTGGTCGGTAG+CGG | - | chr3_3:66346731-66346750 | None:intergenic | 60.0% |
| ! | GGGGTAAGTGAGGTGGTGGT+CGG | - | chr3_3:66346737-66346756 | None:intergenic | 60.0% |
| AGGTGGGGTAAGTGAGGTGG+TGG | - | chr3_3:66346741-66346760 | None:intergenic | 60.0% | |
| GGAAGGTGGGGTAAGTGAGG+TGG | - | chr3_3:66346744-66346763 | None:intergenic | 60.0% | |
| GGAGGAAGGTGGGGTAAGTG+AGG | - | chr3_3:66346747-66346766 | None:intergenic | 60.0% | |
| CTATGGTGACACCGAGGGAG+AGG | - | chr3_3:66346885-66346904 | None:intergenic | 60.0% | |
| CAGGAGCTATGGTGACACCG+AGG | - | chr3_3:66346891-66346910 | None:intergenic | 60.0% | |
| ! | GGTGAGAGCTTTGGCCATGG+GGG | + | chr3_3:66347314-66347333 | Msa0465880:CDS | 60.0% |
| TTTGGCCATGGGGGAGACGT+TGG | + | chr3_3:66347323-66347342 | Msa0465880:CDS | 60.0% | |
| CATCACCAACGTCTCCCCCA+TGG | - | chr3_3:66347331-66347350 | None:intergenic | 60.0% | |
| ATTCGGTTGTTGGGGAGCGG+TGG | + | chr3_3:66347483-66347502 | Msa0465880:CDS | 60.0% | |
| TCCGCAACCTCCTTCCCAAG+CGG | - | chr3_3:66347513-66347532 | None:intergenic | 60.0% | |
| GTGGAGGAAGAGGGGCGATT+GGG | - | chr3_3:66346618-66346637 | None:intergenic | 60.0% | |
| TTGGGAGGGTGGAGGAAGAG+GGG | - | chr3_3:66346626-66346645 | None:intergenic | 60.0% | |
| GTTGGGAGGGTGGAGGAAGA+GGG | - | chr3_3:66346627-66346646 | None:intergenic | 60.0% | |
| ! | GAGAGAGTGCATAGTCGGCG+AGG | - | chr3_3:66346657-66346676 | None:intergenic | 60.0% |
| !! | GGTGGTGTTGTTGGTGACGG+CGG | - | chr3_3:66346695-66346714 | None:intergenic | 60.0% |
| !! | GGCGGTGGTGTTGTTGGTGA+CGG | - | chr3_3:66346698-66346717 | None:intergenic | 60.0% |
| !! | GATGAGGGCGGTGGTGTTGT+TGG | - | chr3_3:66346704-66346723 | None:intergenic | 60.0% |
| ! | AGTGAGGTGGTGGTCGGTAG+CGG | - | chr3_3:66346731-66346750 | None:intergenic | 60.0% |
| ! | GGGGTAAGTGAGGTGGTGGT+CGG | - | chr3_3:66346737-66346756 | None:intergenic | 60.0% |
| AGGTGGGGTAAGTGAGGTGG+TGG | - | chr3_3:66346741-66346760 | None:intergenic | 60.0% | |
| GGAAGGTGGGGTAAGTGAGG+TGG | - | chr3_3:66346744-66346763 | None:intergenic | 60.0% | |
| GGAGGAAGGTGGGGTAAGTG+AGG | - | chr3_3:66346747-66346766 | None:intergenic | 60.0% | |
| CTATGGTGACACCGAGGGAG+AGG | - | chr3_3:66346885-66346904 | None:intergenic | 60.0% | |
| CAGGAGCTATGGTGACACCG+AGG | - | chr3_3:66346891-66346910 | None:intergenic | 60.0% | |
| ! | GGTGAGAGCTTTGGCCATGG+GGG | + | chr3_3:66347314-66347333 | Msa0465880:CDS | 60.0% |
| TTTGGCCATGGGGGAGACGT+TGG | + | chr3_3:66347323-66347342 | Msa0465880:CDS | 60.0% | |
| CATCACCAACGTCTCCCCCA+TGG | - | chr3_3:66347331-66347350 | None:intergenic | 60.0% | |
| ATTCGGTTGTTGGGGAGCGG+TGG | + | chr3_3:66347483-66347502 | Msa0465880:CDS | 60.0% | |
| TCCGCAACCTCCTTCCCAAG+CGG | - | chr3_3:66347513-66347532 | None:intergenic | 60.0% | |
| GCGGAGGCTGTGGAAGGTTC+TGG | - | chr3_3:66346596-66346615 | None:intergenic | 65.0% | |
| GATTGGGCGGAGGCTGTGGA+AGG | - | chr3_3:66346602-66346621 | None:intergenic | 65.0% | |
| GAGGAAGAGGGGCGATTGGG+CGG | - | chr3_3:66346615-66346634 | None:intergenic | 65.0% | |
| GGTGGAGGAAGAGGGGCGAT+TGG | - | chr3_3:66346619-66346638 | None:intergenic | 65.0% | |
| GGTTGGGAGGGTGGAGGAAG+AGG | - | chr3_3:66346628-66346647 | None:intergenic | 65.0% | |
| GAGAGAGGTTGGGAGGGTGG+AGG | - | chr3_3:66346634-66346653 | None:intergenic | 65.0% | |
| AGGGAGAGAGGTTGGGAGGG+TGG | - | chr3_3:66346637-66346656 | None:intergenic | 65.0% | |
| GCGAGGGAGAGAGGTTGGGA+GGG | - | chr3_3:66346640-66346659 | None:intergenic | 65.0% | |
| GTCGGCGAGGGAGAGAGGTT+GGG | - | chr3_3:66346644-66346663 | None:intergenic | 65.0% | |
| AGTCGGCGAGGGAGAGAGGT+TGG | - | chr3_3:66346645-66346664 | None:intergenic | 65.0% | |
| GCATAGTCGGCGAGGGAGAG+AGG | - | chr3_3:66346649-66346668 | None:intergenic | 65.0% | |
| !! | GTTGTTGGTGACGGCGGTGG+TGG | - | chr3_3:66346689-66346708 | None:intergenic | 65.0% |
| !! | GGTGTTGTTGGTGACGGCGG+TGG | - | chr3_3:66346692-66346711 | None:intergenic | 65.0% |
| !! | GTCGGTAGCGGCGTCGATGA+GGG | - | chr3_3:66346719-66346738 | None:intergenic | 65.0% |
| GGTGACACCGAGGGAGAGGA+GGG | - | chr3_3:66346881-66346900 | None:intergenic | 65.0% | |
| TGGTGACACCGAGGGAGAGG+AGG | - | chr3_3:66346882-66346901 | None:intergenic | 65.0% | |
| !! | GGGGAGGAGAGTGGGTTAGC+AGG | - | chr3_3:66346910-66346929 | None:intergenic | 65.0% |
| GCCGCTTGGGAAGGAGGTTG+CGG | + | chr3_3:66347509-66347528 | Msa0465880:CDS | 65.0% | |
| GCGGAGGCTGTGGAAGGTTC+TGG | - | chr3_3:66346596-66346615 | None:intergenic | 65.0% | |
| GATTGGGCGGAGGCTGTGGA+AGG | - | chr3_3:66346602-66346621 | None:intergenic | 65.0% | |
| GAGGAAGAGGGGCGATTGGG+CGG | - | chr3_3:66346615-66346634 | None:intergenic | 65.0% | |
| GGTGGAGGAAGAGGGGCGAT+TGG | - | chr3_3:66346619-66346638 | None:intergenic | 65.0% | |
| GGTTGGGAGGGTGGAGGAAG+AGG | - | chr3_3:66346628-66346647 | None:intergenic | 65.0% | |
| GAGAGAGGTTGGGAGGGTGG+AGG | - | chr3_3:66346634-66346653 | None:intergenic | 65.0% | |
| AGGGAGAGAGGTTGGGAGGG+TGG | - | chr3_3:66346637-66346656 | None:intergenic | 65.0% | |
| GCGAGGGAGAGAGGTTGGGA+GGG | - | chr3_3:66346640-66346659 | None:intergenic | 65.0% | |
| GTCGGCGAGGGAGAGAGGTT+GGG | - | chr3_3:66346644-66346663 | None:intergenic | 65.0% | |
| AGTCGGCGAGGGAGAGAGGT+TGG | - | chr3_3:66346645-66346664 | None:intergenic | 65.0% | |
| GCATAGTCGGCGAGGGAGAG+AGG | - | chr3_3:66346649-66346668 | None:intergenic | 65.0% | |
| !! | GTTGTTGGTGACGGCGGTGG+TGG | - | chr3_3:66346689-66346708 | None:intergenic | 65.0% |
| !! | GGTGTTGTTGGTGACGGCGG+TGG | - | chr3_3:66346692-66346711 | None:intergenic | 65.0% |
| !! | GTCGGTAGCGGCGTCGATGA+GGG | - | chr3_3:66346719-66346738 | None:intergenic | 65.0% |
| GGTGACACCGAGGGAGAGGA+GGG | - | chr3_3:66346881-66346900 | None:intergenic | 65.0% | |
| TGGTGACACCGAGGGAGAGG+AGG | - | chr3_3:66346882-66346901 | None:intergenic | 65.0% | |
| !! | GGGGAGGAGAGTGGGTTAGC+AGG | - | chr3_3:66346910-66346929 | None:intergenic | 65.0% |
| GCCGCTTGGGAAGGAGGTTG+CGG | + | chr3_3:66347509-66347528 | Msa0465880:CDS | 65.0% | |
| GAAGAGGGGCGATTGGGCGG+AGG | - | chr3_3:66346612-66346631 | None:intergenic | 70.0% | |
| GGCGAGGGAGAGAGGTTGGG+AGG | - | chr3_3:66346641-66346660 | None:intergenic | 70.0% | |
| !! | TGACGGCGGTGGTGGTGGAG+AGG | - | chr3_3:66346681-66346700 | None:intergenic | 70.0% |
| !! | GTTGGTGACGGCGGTGGTGG+TGG | - | chr3_3:66346686-66346705 | None:intergenic | 70.0% |
| !! | GGTAGCGGCGTCGATGAGGG+CGG | - | chr3_3:66346716-66346735 | None:intergenic | 70.0% |
| !! | GGTCGGTAGCGGCGTCGATG+AGG | - | chr3_3:66346720-66346739 | None:intergenic | 70.0% |
| TGGTGCGCCGCTTGGGAAGG+AGG | + | chr3_3:66347503-66347522 | Msa0465880:CDS | 70.0% | |
| GAAGAGGGGCGATTGGGCGG+AGG | - | chr3_3:66346612-66346631 | None:intergenic | 70.0% | |
| GGCGAGGGAGAGAGGTTGGG+AGG | - | chr3_3:66346641-66346660 | None:intergenic | 70.0% | |
| !! | TGACGGCGGTGGTGGTGGAG+AGG | - | chr3_3:66346681-66346700 | None:intergenic | 70.0% |
| !! | GTTGGTGACGGCGGTGGTGG+TGG | - | chr3_3:66346686-66346705 | None:intergenic | 70.0% |
| !! | GGTAGCGGCGTCGATGAGGG+CGG | - | chr3_3:66346716-66346735 | None:intergenic | 70.0% |
| !! | GGTCGGTAGCGGCGTCGATG+AGG | - | chr3_3:66346720-66346739 | None:intergenic | 70.0% |
| TGGTGCGCCGCTTGGGAAGG+AGG | + | chr3_3:66347503-66347522 | Msa0465880:CDS | 70.0% | |
| GGGCGATTGGGCGGAGGCTG+TGG | - | chr3_3:66346606-66346625 | None:intergenic | 75.0% | |
| !! | AGCGGCGTCGATGAGGGCGG+TGG | - | chr3_3:66346713-66346732 | None:intergenic | 75.0% |
| GGAGCGGTGGTGCGCCGCTT+GGG | + | chr3_3:66347496-66347515 | Msa0465880:CDS | 75.0% | |
| CGGTGGTGCGCCGCTTGGGA+AGG | + | chr3_3:66347500-66347519 | Msa0465880:CDS | 75.0% | |
| GGGCGATTGGGCGGAGGCTG+TGG | - | chr3_3:66346606-66346625 | None:intergenic | 75.0% | |
| !! | AGCGGCGTCGATGAGGGCGG+TGG | - | chr3_3:66346713-66346732 | None:intergenic | 75.0% |
| GGAGCGGTGGTGCGCCGCTT+GGG | + | chr3_3:66347496-66347515 | Msa0465880:CDS | 75.0% | |
| CGGTGGTGCGCCGCTTGGGA+AGG | + | chr3_3:66347500-66347519 | Msa0465880:CDS | 75.0% | |
| ! | GGGAGCGGTGGTGCGCCGCT+TGG | + | chr3_3:66347495-66347514 | Msa0465880:CDS | 80.0% |
| ! | GGGAGCGGTGGTGCGCCGCT+TGG | + | chr3_3:66347495-66347514 | Msa0465880:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 66346517 | 66348364 | 66346517 | ID=Msa0465880;Name=Msa0465880 |
| chr3_3 | mRNA | 66346517 | 66348364 | 66346517 | ID=Msa0465880-mRNA-1;Parent=Msa0465880;Name=Msa0465880-mRNA-1;_AED=0.34;_eAED=0.34;_QI=0|0|0|0.5|1|1|2|0|363 |
| chr3_3 | exon | 66346517 | 66347572 | 66346517 | ID=Msa0465880-mRNA-1:exon:15024;Parent=Msa0465880-mRNA-1 |
| chr3_3 | exon | 66348329 | 66348364 | 66348329 | ID=Msa0465880-mRNA-1:exon:15025;Parent=Msa0465880-mRNA-1 |
| chr3_3 | CDS | 66346517 | 66347572 | 66346517 | ID=Msa0465880-mRNA-1:cds;Parent=Msa0465880-mRNA-1 |
| chr3_3 | CDS | 66348329 | 66348364 | 66348329 | ID=Msa0465880-mRNA-1:cds;Parent=Msa0465880-mRNA-1 |
| Gene Sequence |
| Protein sequence |
