AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0468280

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0468280 MtrunA17_Chr3g0116431 88.742 453 21 6 307 730 60 511 0.0 803
Msa0468280 MtrunA17_Chr3g0116431 91.857 307 14 3 9 306 138 442 0.0 581
Msa0468280 MtrunA17_Chr3g0116431 35.354 99 62 2 69 166 378 475 1.24e-11 67.8
Msa0468280 MtrunA17_Chr4g0058011 65.537 354 98 9 396 730 221 569 8.50e-159 471
Msa0468280 MtrunA17_Chr4g0058011 66.667 285 79 7 33 306 221 500 4.23e-129 395
Msa0468280 MtrunA17_Chr7g0249221 37.027 370 186 8 406 730 27 394 1.15e-71 239
Msa0468280 MtrunA17_Chr7g0249221 36.610 295 152 8 43 306 27 317 1.84e-48 176
Msa0468280 MtrunA17_Chr7g0249221 36.752 117 65 2 92 208 277 384 1.84e-13 73.2
Msa0468280 MtrunA17_Chr7g0249221 39.130 115 50 4 18 124 253 355 5.01e-13 71.6
Msa0468280 MtrunA17_Chr5g0438891 39.634 328 154 11 406 702 36 350 1.07e-64 221
Msa0468280 MtrunA17_Chr5g0438891 37.722 281 132 11 43 299 36 297 7.37e-43 160
Msa0468280 MtrunA17_Chr5g0438891 41.379 116 61 4 90 201 262 374 2.18e-15 79.0
Msa0468280 MtrunA17_Chr5g0438891 38.095 105 56 3 20 118 233 334 1.94e-12 70.1
Msa0468280 MtrunA17_Chr2g0286151 35.380 342 167 10 404 695 42 379 2.51e-51 186
Msa0468280 MtrunA17_Chr2g0286151 46.970 132 67 3 41 171 42 171 5.37e-31 127
Msa0468280 MtrunA17_Chr1g0195891 35.161 310 157 10 399 669 39 343 4.30e-48 173
Msa0468280 MtrunA17_Chr1g0195891 33.333 300 160 10 36 301 39 332 7.60e-43 158
Msa0468280 MtrunA17_Chr1g0195891 41.880 117 63 2 618 730 90 205 5.94e-20 92.0
Msa0468280 MtrunA17_Chr8g0356241 32.402 358 153 9 403 721 187 494 1.05e-46 174
Msa0468280 MtrunA17_Chr8g0356241 30.699 329 140 11 259 533 185 479 5.02e-34 137
Msa0468280 MtrunA17_Chr8g0356241 29.640 361 130 10 43 325 138 452 1.28e-31 129
Msa0468280 MtrunA17_Chr8g0356241 31.373 306 140 10 40 293 187 474 2.27e-28 120
Msa0468280 MtrunA17_Chr8g0356241 35.673 171 66 5 44 171 310 479 2.06e-22 101
Msa0468280 MtrunA17_Chr8g0356241 48.810 84 38 1 614 697 185 263 1.27e-16 83.6
Msa0468280 MtrunA17_Chr4g0066941 31.818 374 167 10 404 696 41 407 1.11e-45 171
Msa0468280 MtrunA17_Chr4g0066941 31.287 342 149 10 41 306 41 372 4.17e-39 152
Msa0468280 MtrunA17_Chr4g0066941 44.156 77 40 3 90 166 332 405 7.43e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0468280 AT3G48440.1 52.121 330 134 6 393 698 93 422 1.58e-115 356
Msa0468280 AT3G48440.1 51.020 294 126 7 30 306 93 385 1.86e-92 296
Msa0468280 AT3G48440.1 47.500 80 41 1 40 119 340 418 9.50e-15 77.8
Msa0468280 AT3G48440.1 42.308 78 44 1 88 165 341 417 3.64e-11 66.6
Msa0468280 AT5G63260.1 52.339 342 135 5 406 727 98 431 2.64e-114 352
Msa0468280 AT5G63260.1 51.342 298 125 5 43 327 98 388 3.61e-90 289
Msa0468280 AT5G63260.1 29.646 226 142 5 264 482 191 406 2.48e-19 92.0
Msa0468280 AT5G63260.1 30.000 150 81 4 19 168 283 408 1.26e-11 67.8
Msa0468280 AT5G63260.2 50.000 358 135 6 406 727 98 447 3.87e-110 342
Msa0468280 AT5G63260.2 48.726 314 125 6 43 327 98 404 4.98e-86 279
Msa0468280 AT5G63260.2 29.646 226 142 5 264 482 207 422 3.60e-19 91.7
Msa0468280 AT5G63260.2 30.000 150 81 4 19 168 299 424 1.74e-11 67.4
Msa0468280 AT3G02830.1 40.881 318 157 5 406 697 37 349 6.38e-73 242
Msa0468280 AT3G02830.1 37.113 291 144 7 43 307 37 314 6.05e-49 177
Msa0468280 AT3G02830.1 45.545 101 54 1 618 717 81 181 6.83e-18 87.0
Msa0468280 AT3G02830.1 28.099 242 142 6 264 489 128 353 2.00e-16 82.4
Msa0468280 AT3G02830.1 46.512 86 43 2 92 177 273 355 4.17e-14 75.5
Msa0468280 AT3G02830.1 30.068 296 143 16 42 298 81 351 6.79e-12 68.6
Msa0468280 AT3G02830.2 40.881 318 157 5 406 697 17 329 6.87e-73 241
Msa0468280 AT3G02830.2 37.113 291 144 7 43 307 17 294 5.90e-49 177
Msa0468280 AT3G02830.2 45.545 101 54 1 618 717 61 161 6.71e-18 86.7
Msa0468280 AT3G02830.2 28.099 242 142 6 264 489 108 333 2.27e-16 82.0
Msa0468280 AT3G02830.2 46.512 86 43 2 92 177 253 335 4.34e-14 75.1
Msa0468280 AT3G02830.2 30.068 296 143 16 42 298 61 331 7.40e-12 68.2
Msa0468280 AT5G16540.3 41.639 305 140 6 406 697 18 297 1.25e-68 229
Msa0468280 AT5G16540.3 35.897 273 139 6 43 307 18 262 4.36e-46 168
Msa0468280 AT5G16540.3 32.927 246 136 8 263 487 62 299 1.35e-22 100
Msa0468280 AT5G16540.3 33.158 190 58 6 405 528 62 248 3.31e-17 84.3
Msa0468280 AT5G16540.3 32.984 191 58 7 42 166 62 248 1.11e-15 79.7
Msa0468280 AT5G16540.3 48.000 75 38 1 92 166 221 294 1.64e-13 73.2
Msa0468280 AT5G16540.1 41.639 305 140 6 406 697 39 318 1.85e-68 230
Msa0468280 AT5G16540.1 35.897 273 139 6 43 307 39 283 7.12e-46 168
Msa0468280 AT5G16540.1 32.927 246 136 8 263 487 83 320 2.41e-22 100
Msa0468280 AT5G16540.1 33.158 190 58 6 405 528 83 269 3.89e-17 84.3
Msa0468280 AT5G16540.1 32.984 191 58 7 42 166 83 269 1.27e-15 79.7
Msa0468280 AT5G16540.1 48.000 75 38 1 92 166 242 315 1.98e-13 73.2
Msa0468280 AT3G06410.1 39.640 333 155 9 404 693 49 378 2.99e-65 224
Msa0468280 AT3G06410.1 36.860 293 145 9 41 297 49 337 3.61e-46 171
Msa0468280 AT3G06410.1 46.914 81 41 1 619 697 97 177 3.63e-17 85.5
Msa0468280 AT3G06410.1 38.961 77 46 1 89 165 303 378 1.73e-11 67.8
Msa0468280 AT3G06410.1 34.884 86 49 2 36 118 297 378 3.61e-11 66.6
Msa0468280 AT3G06410.1 34.884 86 49 2 399 481 297 378 3.61e-11 66.6
Msa0468280 AT2G47850.1 37.931 348 179 10 384 696 18 363 9.87e-65 223
Msa0468280 AT2G47850.1 35.331 317 168 12 21 306 18 328 5.59e-47 174
Msa0468280 AT2G47850.1 41.489 94 44 2 73 166 279 361 1.25e-14 77.4
Msa0468280 AT2G47850.3 37.931 348 179 10 384 696 18 363 9.87e-65 223
Msa0468280 AT2G47850.3 35.331 317 168 12 21 306 18 328 5.59e-47 174
Msa0468280 AT2G47850.3 41.489 94 44 2 73 166 279 361 1.25e-14 77.4
Msa0468280 AT5G18550.3 38.110 328 162 9 404 693 14 338 1.25e-62 216
Msa0468280 AT5G18550.3 35.915 284 148 8 41 293 14 294 3.08e-45 168
Msa0468280 AT5G18550.3 50.000 78 39 0 617 694 14 91 8.41e-18 87.0
Msa0468280 AT5G18550.3 35.897 78 48 1 41 118 263 338 3.01e-11 66.6
Msa0468280 AT5G18550.3 32.979 94 61 2 72 165 247 338 7.44e-11 65.5
Msa0468280 AT5G18550.1 38.110 328 162 9 404 693 46 370 1.62e-62 216
Msa0468280 AT5G18550.1 35.915 284 148 8 41 293 46 326 3.97e-45 168
Msa0468280 AT5G18550.1 50.000 78 39 0 617 694 46 123 6.32e-18 87.8
Msa0468280 AT5G18550.1 35.897 78 48 1 41 118 295 370 4.61e-11 66.2
Msa0468280 AT5G18550.1 40.541 74 42 2 92 165 299 370 8.49e-11 65.5
Msa0468280 AT5G18550.4 38.110 328 162 9 404 693 46 370 1.80e-62 216
Msa0468280 AT5G18550.4 35.915 284 148 8 41 293 46 326 4.30e-45 168
Msa0468280 AT5G18550.4 50.000 78 39 0 617 694 46 123 7.38e-18 87.4
Msa0468280 AT5G18550.4 35.897 78 48 1 41 118 295 370 4.17e-11 66.2
Msa0468280 AT5G18550.4 40.541 74 42 2 92 165 299 370 8.63e-11 65.5
Msa0468280 AT1G04990.1 37.690 329 187 8 383 702 21 340 2.80e-62 214
Msa0468280 AT1G04990.1 35.616 292 163 9 20 302 21 296 2.39e-45 167
Msa0468280 AT1G04990.1 33.835 133 73 3 90 222 258 375 9.32e-11 65.1
Msa0468280 AT1G04990.6 37.690 329 187 8 383 702 21 340 2.80e-62 214
Msa0468280 AT1G04990.6 35.616 292 163 9 20 302 21 296 2.39e-45 167
Msa0468280 AT1G04990.6 33.835 133 73 3 90 222 258 375 9.32e-11 65.1
Msa0468280 AT1G04990.2 37.690 329 187 8 383 702 21 340 2.80e-62 214
Msa0468280 AT1G04990.2 35.616 292 163 9 20 302 21 296 2.39e-45 167
Msa0468280 AT1G04990.2 33.835 133 73 3 90 222 258 375 9.32e-11 65.1
Msa0468280 AT5G16540.2 39.672 305 139 7 406 697 39 311 1.78e-61 211
Msa0468280 AT5G16540.2 35.897 273 139 6 43 307 39 283 4.76e-46 168
Msa0468280 AT5G16540.2 32.922 243 133 7 263 487 83 313 7.85e-23 101
Msa0468280 AT5G16540.2 32.984 191 58 7 42 166 83 269 1.17e-15 79.7
Msa0468280 AT5G16540.2 43.902 82 38 1 43 124 240 313 5.17e-12 68.6
Msa0468280 AT2G32930.2 34.770 348 185 11 377 699 12 342 3.53e-56 199
Msa0468280 AT2G32930.2 33.007 306 165 12 21 306 19 304 3.60e-40 154
Msa0468280 AT5G18550.2 35.671 328 157 9 404 693 46 357 1.31e-55 197
Msa0468280 AT5G18550.2 35.915 284 148 8 41 293 46 326 3.27e-45 168
Msa0468280 AT5G18550.2 50.000 78 39 0 617 694 46 123 5.49e-18 87.8
Msa0468280 AT2G32930.3 35.455 330 171 11 395 699 3 315 4.84e-55 195
Msa0468280 AT2G32930.3 33.220 295 157 12 32 306 3 277 2.80e-39 151
Msa0468280 AT1G04990.5 35.258 329 175 9 383 702 21 320 1.83e-53 189
Msa0468280 AT1G04990.5 35.336 283 158 9 20 293 21 287 4.82e-43 160
Msa0468280 AT5G16540.4 39.711 277 129 6 406 669 18 269 3.07e-53 185
Msa0468280 AT5G16540.4 35.897 273 139 6 43 307 18 262 6.39e-47 168
Msa0468280 AT5G16540.4 49.351 77 39 0 618 694 62 138 1.48e-18 87.0
Msa0468280 AT5G16540.4 33.158 190 58 6 405 528 62 248 2.31e-17 83.6
Msa0468280 AT5G16540.4 32.984 191 58 7 42 166 62 248 8.46e-16 79.0
Msa0468280 AT5G16540.4 46.835 79 39 2 619 696 18 94 1.17e-13 72.4
Msa0468280 AT2G32930.1 34.483 348 182 12 377 699 12 338 9.12e-53 189
Msa0468280 AT2G32930.1 32.680 306 162 13 21 306 19 300 5.76e-37 145
Msa0468280 AT3G12680.1 30.833 360 154 8 372 694 198 499 4.90e-48 178
Msa0468280 AT3G12680.1 29.503 322 131 9 9 300 198 453 2.19e-35 141
Msa0468280 AT3G12680.1 30.599 317 149 7 259 533 217 504 9.54e-33 133
Msa0468280 AT3G12680.1 35.882 170 64 4 44 171 338 504 6.02e-23 103
Msa0468280 AT3G12680.1 45.977 87 42 2 614 698 217 300 4.25e-16 82.4
Msa0468280 AT3G12680.1 39.024 82 44 1 43 118 417 498 8.05e-13 72.0
Msa0468280 AT2G47850.2 35.452 299 139 9 451 696 40 337 3.48e-45 168
Msa0468280 AT2G47850.2 32.013 303 171 13 21 306 18 302 3.88e-34 136
Msa0468280 AT2G47850.2 41.489 94 44 2 73 166 253 335 7.73e-15 78.2
Msa0468280 AT2G47850.2 40.000 90 39 2 404 486 258 339 3.51e-12 69.7
Msa0468280 AT1G04990.3 37.154 253 145 7 459 702 12 259 4.93e-45 164
Msa0468280 AT1G04990.3 34.259 216 121 8 96 302 12 215 1.43e-28 117
Msa0468280 AT1G04990.3 25.275 273 148 9 275 528 17 252 1.66e-12 69.7
Msa0468280 AT1G04990.3 41.558 77 44 1 90 166 177 252 5.23e-11 65.1
Msa0468280 AT2G47850.4 39.916 238 110 8 492 696 4 241 5.01e-41 154
Msa0468280 AT2G47850.4 29.818 275 151 7 258 528 3 239 1.11e-24 106
Msa0468280 AT2G47850.4 36.232 207 99 10 129 306 4 206 4.59e-24 104
Msa0468280 AT2G47850.4 41.489 94 44 2 73 166 157 239 2.60e-15 78.6
Msa0468280 AT2G47850.4 40.000 90 39 2 41 123 162 243 1.40e-12 70.1
Msa0468280 AT1G04990.4 33.992 253 133 8 459 702 12 239 1.47e-36 140
Msa0468280 AT1G04990.4 33.816 207 116 8 96 293 12 206 2.20e-26 110
Msa0468280 AT1G48195.1 64.935 77 27 0 617 693 4 80 2.56e-31 117
Msa0468280 AT1G48195.1 38.961 77 47 0 451 527 4 80 1.77e-13 66.6
Msa0468280 AT1G48195.1 60.000 45 18 0 262 306 4 48 2.64e-12 63.5
Msa0468280 AT1G48195.1 38.462 78 47 1 88 165 4 80 7.49e-12 62.0

Find 203 sgRNAs with CRISPR-Local

Find 539 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGATATGGAATTTGCAAATT+TGG 0.116818 3_3:-69904739 Msa0468280:CDS
TCAGGTTCACCAGGTCTTTC+TGG 0.127881 3_3:+69905004 None:intergenic
TCAGGTTCACCAGGTCTTTC+TGG 0.127881 3_3:+69909285 None:intergenic
AAGACTGGAACTTGCAAATT+TGG 0.144169 3_3:-69907415 Msa0468280:CDS
AAGACTGGAACTTGCAAATT+TGG 0.144169 3_3:-69911700 Msa0468280:CDS
GAACCGGTGCGCATGTAATA+AGG 0.235921 3_3:+69906112 None:intergenic
GAACCGGTGCGCATGTAATA+AGG 0.252734 3_3:+69910396 None:intergenic
CAAAAGAACTGCTCAATTAA+TGG 0.266115 3_3:-69904251 Msa0468280:three_prime_UTR
TTCCAGTTTGTTATCTCTCT+TGG 0.278370 3_3:-69904379 Msa0468280:three_prime_UTR
AAGATGAAAATCACAAAATA+TGG 0.299144 3_3:+69904519 None:intergenic
AAAATACCTTGCATTCTATC+TGG 0.302106 3_3:+69907080 None:intergenic
AAAATACCTTGCATTCTATC+TGG 0.302106 3_3:+69911364 None:intergenic
CGCACCGGTTCTTGTAAGTT+TGG 0.307678 3_3:-69906100 Msa0468280:CDS
GGCAGGAGAAAGAGATGAAT+TGG 0.309939 3_3:-69907116 Msa0468280:CDS
GGCAGGAGAAAGAGATGAAT+TGG 0.309939 3_3:-69911400 Msa0468280:CDS
AGCAGCTGTAGATTATCTTT+TGG 0.310382 3_3:-69904402 Msa0468280:three_prime_UTR
TCCATTCCAGTCAGAACTTC+GGG 0.313058 3_3:+69905880 None:intergenic
TCCATTCCAGTCAGAACTTC+GGG 0.313058 3_3:+69910161 None:intergenic
GGAGGGTATGACTCCACTTT+AGG 0.326168 3_3:-69906037 Msa0468280:CDS
GGAGGGTATGACTCCACTTT+AGG 0.326168 3_3:-69910318 Msa0468280:CDS
TGTAATGAGTGCACACATTC+TGG 0.330211 3_3:+69904764 None:intergenic
TTTAAGAAGAAACTGCATTC+AGG 0.330498 3_3:+69904986 None:intergenic
TTTAAGAAGAAACTGCATTC+AGG 0.330498 3_3:+69909267 None:intergenic
ACCGGTTCTTCTTGTAAGTT+TGG 0.331529 3_3:-69910381 Msa0468280:CDS
ACCTGGTTTCTTCTCCAAAC+AGG 0.348538 3_3:+69907370 None:intergenic
ACCTGGTTTCTTCTCCAAAC+AGG 0.348538 3_3:+69911655 None:intergenic
TGCACTCATTACAACCGATA+TGG 0.357948 3_3:-69904754 Msa0468280:CDS
AAAGAACAGTCTTCAGCTTC+AGG 0.362830 3_3:+69907445 None:intergenic
AAAGAACAGTCTTCAGCTTC+AGG 0.362830 3_3:+69911730 None:intergenic
TAAGCATTCGTTTCCATAGC+TGG 0.369326 3_3:+69905064 None:intergenic
TAAGCATTCGTTTCCATAGC+TGG 0.369326 3_3:+69909345 None:intergenic
CAAATTTGCAAATTCCATAT+CGG 0.369456 3_3:+69904740 None:intergenic
TGACAGTATTATTCAAGATC+TGG 0.369833 3_3:-69906377 Msa0468280:intron
TGACAGTATTATTCAAGATC+TGG 0.369833 3_3:-69910661 Msa0468280:intron
GCAAGTTTAATCACCCTGTT+TGG 0.377149 3_3:-69907384 Msa0468280:CDS
GCAAGTTTAATCACCCTGTT+TGG 0.377149 3_3:-69911669 Msa0468280:CDS
ACTAAAGTTCAACATTTCAT+TGG 0.377225 3_3:+69904279 None:intergenic
GTGATTATGTGGTGAGTGAT+TGG 0.386277 3_3:-69907540 Msa0468280:CDS
TATGACTCCACTTTAGGATA+TGG 0.386430 3_3:-69906031 Msa0468280:intron
TATGACTCCACTTTAGGATA+TGG 0.386430 3_3:-69910312 Msa0468280:intron
TTCTGACTGGAATGGATATC+AGG 0.390808 3_3:-69905873 Msa0468280:intron
TTCTGACTGGAATGGATATC+AGG 0.390808 3_3:-69910154 Msa0468280:intron
TTGTTTAGTTTACTTGAAAC+AGG 0.394761 3_3:+69904183 None:intergenic
TGCTCCAAACTTACAAGAAC+CGG 0.396802 3_3:+69906096 None:intergenic
TATCTCTCTTGGATTAGTAT+TGG 0.397975 3_3:-69904368 Msa0468280:three_prime_UTR
CCTTGGCCTACCTATTCGTT+TGG 0.402338 3_3:-69906273 Msa0468280:intron
CCTTGGCCTACCTATTCGTT+TGG 0.402338 3_3:-69910557 Msa0468280:intron
GATAACGTCCAGGCATAGTT+GGG 0.405460 3_3:+69904677 None:intergenic
TGCTGTTCTAGAATTTGATA+AGG 0.409379 3_3:-69907740 Msa0468280:CDS
ATTACTTTATTTAACTTCAC+TGG 0.413927 3_3:-69904489 Msa0468280:three_prime_UTR
ATGATTATGTGGTGAGTGAT+TGG 0.418010 3_3:-69911825 Msa0468280:CDS
CTTTCTGGAAACTCTTCAAC+TGG 0.426995 3_3:+69905019 None:intergenic
CTTTCTGGAAACTCTTCAAC+TGG 0.426995 3_3:+69909300 None:intergenic
GCTGGATTGTTCACGGCATA+TGG 0.429292 3_3:+69905082 None:intergenic
GCTGGATTGTTCACGGCATA+TGG 0.429292 3_3:+69909363 None:intergenic
TTCCATAGCTGGATTGTTCA+CGG 0.431515 3_3:+69905075 None:intergenic
TTCCATAGCTGGATTGTTCA+CGG 0.431515 3_3:+69909356 None:intergenic
GCAACAATTTAATAGCTTTG+AGG 0.433569 3_3:-69904592 Msa0468280:exon
AAAGCTTATACCAAACGAAT+AGG 0.433676 3_3:+69906263 None:intergenic
AAAGCTTATACCAAACGAAT+AGG 0.433676 3_3:+69910547 None:intergenic
AAAGGTTCAAACTTTGAAGT+TGG 0.439652 3_3:-69907772 Msa0468280:intron
ATCTGCTGAAAACTTTCCTC+TGG 0.440653 3_3:+69906316 None:intergenic
ATCTGCTGAAAACTTTCCTC+TGG 0.440653 3_3:+69910600 None:intergenic
CAAAAGGCTTGTGCCACATC+AGG 0.446756 3_3:+69904461 None:intergenic
AATTTCATCATCCAAAGAAC+CGG 0.447322 3_3:-69904931 Msa0468280:CDS
AATTTCATCATCCAAAGAAC+CGG 0.447322 3_3:-69909212 Msa0468280:CDS
GTGAGTGGAATTGATGATAA+AGG 0.457463 3_3:-69907655 Msa0468280:CDS
AAGGCAGACCCTTGTCACTT+AGG 0.458239 3_3:+69904885 None:intergenic
ATCATAATTTCACCGACTCC+AGG 0.458700 3_3:-69905911 Msa0468280:CDS
ATCATAATTTCACCGACTCC+AGG 0.458700 3_3:-69910192 Msa0468280:CDS
TCTTCAGCTTCAGGCCTCAA+TGG 0.459779 3_3:+69907454 None:intergenic
TCTTCAGCTTCAGGCCTCAA+TGG 0.459779 3_3:+69911739 None:intergenic
GAAATTATGATTGGCGCAAA+AGG 0.463542 3_3:+69905923 None:intergenic
GAAATTATGATTGGCGCAAA+AGG 0.463542 3_3:+69910204 None:intergenic
GCTGTTCTAGAATTTGATAA+GGG 0.467346 3_3:-69907739 Msa0468280:CDS
ATATATAGCTATTCCGCAAA+AGG 0.469443 3_3:+69904445 None:intergenic
CCCTTGTCACTTAGGTTGCA+TGG 0.470112 3_3:+69904893 None:intergenic
CCCTTGTCACTTAGGTTGCA+TGG 0.470112 3_3:+69909174 None:intergenic
GACAGTATTATTCAAGATCT+GGG 0.475323 3_3:-69906376 Msa0468280:intron
GACAGTATTATTCAAGATCT+GGG 0.475323 3_3:-69910660 Msa0468280:intron
CATCAAGTTCATGATGATGA+TGG 0.477201 3_3:-69907571 Msa0468280:CDS
GAACTTCGGGGAGAAGCCCC+TGG 0.478122 3_3:+69905893 None:intergenic
GAACTTCGGGGAGAAGCCCC+TGG 0.478122 3_3:+69910174 None:intergenic
TCCAAACTTACAAGAAGAAC+CGG 0.485308 3_3:+69910380 None:intergenic
AACCGGTGCGCATGTAATAA+GGG 0.486519 3_3:+69906113 None:intergenic
CCCGATCCTACATCTGTTGG+AGG 0.492082 3_3:-69906055 Msa0468280:CDS
CCCGATCCTACATCTGTTGG+AGG 0.492082 3_3:-69910336 Msa0468280:CDS
AGTATTGAGGAGGCTGGAAG+TGG 0.494418 3_3:-69904628 Msa0468280:CDS
AACCGGTGCGCATGTAATAA+GGG 0.496486 3_3:+69910397 None:intergenic
CATCCCGATCCTACATCTGT+TGG 0.500007 3_3:-69906058 Msa0468280:CDS
CATCCCGATCCTACATCTGT+TGG 0.500007 3_3:-69910339 Msa0468280:CDS
ATCCAAGAGAGATAACAAAC+TGG 0.502672 3_3:+69904377 None:intergenic
ATCCATTCCAGTCAGAACTT+CGG 0.504723 3_3:+69905879 None:intergenic
ATCCATTCCAGTCAGAACTT+CGG 0.504723 3_3:+69910160 None:intergenic
CCCTGTTTGGAGAAGAAACC+AGG 0.508022 3_3:-69907371 Msa0468280:intron
CCCTGTTTGGAGAAGAAACC+AGG 0.508022 3_3:-69911656 Msa0468280:intron
GGATTTAAATTTGCAATCCC+CGG 0.510053 3_3:+69904961 None:intergenic
GGATTTAAATTTGCAATCCC+CGG 0.510053 3_3:+69909242 None:intergenic
TCATCAGTTCATGATGATGA+TGG 0.514961 3_3:-69911856 Msa0468280:CDS
TGATAACGTCCAGGCATAGT+TGG 0.516040 3_3:+69904676 None:intergenic
CACAAACTCGGCTAGTATTG+AGG 0.521153 3_3:-69904641 Msa0468280:CDS
CTTCTCCCCGAAGTTCTGAC+TGG 0.521361 3_3:-69905886 Msa0468280:CDS
CTTCTCCCCGAAGTTCTGAC+TGG 0.521361 3_3:-69910167 Msa0468280:CDS
CCCTCCAACAGATGTAGGAT+CGG 0.524928 3_3:+69906054 None:intergenic
CCCTCCAACAGATGTAGGAT+CGG 0.524928 3_3:+69910335 None:intergenic
TCCATTACCATATCCTAAAG+TGG 0.526454 3_3:+69906024 None:intergenic
TCCATTACCATATCCTAAAG+TGG 0.526454 3_3:+69910305 None:intergenic
GGAGTCGGTGAAATTATGAT+TGG 0.532435 3_3:+69905914 None:intergenic
GGAGTCGGTGAAATTATGAT+TGG 0.532435 3_3:+69910195 None:intergenic
TGGATGATGAAATTTGCAAT+GGG 0.532458 3_3:+69904940 None:intergenic
TGGATGATGAAATTTGCAAT+GGG 0.532458 3_3:+69909221 None:intergenic
TCGGCTAGTATTGAGGAGGC+TGG 0.532916 3_3:-69904634 Msa0468280:CDS
ATTGGATTATATAGTTGTGC+TGG 0.534752 3_3:-69904350 Msa0468280:three_prime_UTR
AGGAGAAAGAGATGAATTGG+AGG 0.535415 3_3:-69907113 Msa0468280:CDS
AGGAGAAAGAGATGAATTGG+AGG 0.535415 3_3:-69911397 Msa0468280:CDS
CCTCCAACAGATGTAGGATC+GGG 0.539485 3_3:+69906055 None:intergenic
CCTCCAACAGATGTAGGATC+GGG 0.539485 3_3:+69910336 None:intergenic
TCATAATTTCACCGACTCCA+GGG 0.539855 3_3:-69905910 Msa0468280:CDS
TCATAATTTCACCGACTCCA+GGG 0.539855 3_3:-69910191 Msa0468280:CDS
TTGGATGATGAAATTTGCAA+TGG 0.544786 3_3:+69904939 None:intergenic
TTGGATGATGAAATTTGCAA+TGG 0.544786 3_3:+69909220 None:intergenic
CGGGGAGAAGCCCCTGGAGT+CGG 0.550896 3_3:+69905899 None:intergenic
CGGGGAGAAGCCCCTGGAGT+CGG 0.550896 3_3:+69910180 None:intergenic
TGCCGTGAACAATCCAGCTA+TGG 0.554540 3_3:-69905077 Msa0468280:CDS
TGCCGTGAACAATCCAGCTA+TGG 0.554540 3_3:-69909358 Msa0468280:CDS
CAGTTCATGATGATGATGGT+TGG 0.557502 3_3:-69911852 Msa0468280:CDS
TCATACCCTCCAACAGATGT+AGG 0.560380 3_3:+69906049 None:intergenic
TCATACCCTCCAACAGATGT+AGG 0.560380 3_3:+69910330 None:intergenic
CCCCGAAGTTCTGACTGGAA+TGG 0.564246 3_3:-69905881 Msa0468280:CDS
CCCCGAAGTTCTGACTGGAA+TGG 0.564246 3_3:-69910162 Msa0468280:CDS
ATCAAGCCAGATAGAATGCA+AGG 0.564984 3_3:-69907086 Msa0468280:intron
ATCAAGCCAGATAGAATGCA+AGG 0.564984 3_3:-69911370 Msa0468280:intron
TGCCCTTATTACATGCGCAC+CGG 0.565218 3_3:-69906115 Msa0468280:CDS
TGCCCTTATTACATGCGCAC+CGG 0.565218 3_3:-69910399 Msa0468280:CDS
GGGGCGGTAGGTTTATCGGG+TGG 0.565245 3_3:+69904698 None:intergenic
ATTGAGGAGGCTGGAAGTGG+AGG 0.565408 3_3:-69904625 Msa0468280:CDS
ACAATCCTCTCACACAAACT+CGG 0.577005 3_3:-69904653 Msa0468280:CDS
TGGTTGGAGTGGTGATTATG+TGG 0.578479 3_3:-69907551 Msa0468280:CDS
CTTATACCAAACGAATAGGT+AGG 0.578718 3_3:+69906267 None:intergenic
CTTATACCAAACGAATAGGT+AGG 0.578718 3_3:+69910551 None:intergenic
AAGATAATCTACAGCTGCTG+AGG 0.580481 3_3:+69904406 None:intergenic
CCTGGTTTCTTCTCCAAACA+GGG 0.582322 3_3:+69907371 None:intergenic
CCTGGTTTCTTCTCCAAACA+GGG 0.582322 3_3:+69911656 None:intergenic
ACTAGCCGAGTTTGTGTGAG+AGG 0.582786 3_3:+69904648 None:intergenic
TGAAAATCACAAAATATGGA+TGG 0.582977 3_3:+69904523 None:intergenic
CATAATTTCACCGACTCCAG+GGG 0.587604 3_3:-69905909 Msa0468280:CDS
CATAATTTCACCGACTCCAG+GGG 0.587604 3_3:-69910190 Msa0468280:CDS
AAATAACTTACAGGTCTCAA+AGG 0.588071 3_3:+69904866 None:intergenic
AAACTGCATTCAGGTTCACC+AGG 0.589001 3_3:+69904995 None:intergenic
AAACTGCATTCAGGTTCACC+AGG 0.589001 3_3:+69909276 None:intergenic
GAGTGATTGGATTGAGAATG+AGG 0.592997 3_3:-69907527 Msa0468280:CDS
GAGTGATTGGATTGAGAATG+AGG 0.592997 3_3:-69911812 Msa0468280:CDS
GAGGATTGTTGATAACGTCC+AGG 0.597566 3_3:+69904667 None:intergenic
ACAGTATGTGAGAAGGGACA+AGG 0.601001 3_3:-69907598 Msa0468280:intron
TTTCACAGTATGTGATGACA+AGG 0.603141 3_3:-69911882 None:intergenic
GGGTGGTCATACTTACAAGC+TGG 0.604093 3_3:+69904715 None:intergenic
ACAGTATTATTCAAGATCTG+GGG 0.604261 3_3:-69906375 Msa0468280:intron
ACAGTATTATTCAAGATCTG+GGG 0.604261 3_3:-69910659 Msa0468280:intron
TGGTTGGAGTGATGATTATG+TGG 0.606737 3_3:-69911836 Msa0468280:CDS
CAGTATTATTCAAGATCTGG+GGG 0.613736 3_3:-69906374 Msa0468280:CDS
CAGTATTATTCAAGATCTGG+GGG 0.613736 3_3:-69910658 Msa0468280:CDS
CCAAACGAATAGGTAGGCCA+AGG 0.617276 3_3:+69906273 None:intergenic
CCAAACGAATAGGTAGGCCA+AGG 0.617276 3_3:+69910557 None:intergenic
ATAACGTCCAGGCATAGTTG+GGG 0.618044 3_3:+69904678 None:intergenic
TATGTTGATGAAAGAAGCAA+TGG 0.625149 3_3:-69907493 Msa0468280:CDS
TATGTTGATGAAAGAAGCAA+TGG 0.625149 3_3:-69911778 Msa0468280:CDS
AAGTTCATGATGATGATGGT+TGG 0.628126 3_3:-69907567 Msa0468280:CDS
TTCACTGGTTATGCCTGATG+TGG 0.629637 3_3:-69904474 Msa0468280:three_prime_UTR
ATTGAGAATGAGGTGGTGAG+TGG 0.632045 3_3:-69907517 Msa0468280:CDS
ATTGAGAATGAGGTGGTGAG+TGG 0.632045 3_3:-69911802 Msa0468280:CDS
TGTAAATTTGATCACACCAG+AGG 0.632238 3_3:-69906332 Msa0468280:CDS
TGTAAATTTGATCACACCAG+AGG 0.632238 3_3:-69910616 Msa0468280:CDS
TTCACGGCATATGGTGAAGG+TGG 0.632618 3_3:+69905091 None:intergenic
TTCACGGCATATGGTGAAGG+TGG 0.632618 3_3:+69909372 None:intergenic
TCCATGCAACCTAAGTGACA+AGG 0.634773 3_3:-69904894 Msa0468280:CDS
GTTGATGAAAGAAGCAATGG+TGG 0.638205 3_3:-69907490 Msa0468280:CDS
GTTGATGAAAGAAGCAATGG+TGG 0.638205 3_3:-69911775 Msa0468280:CDS
CCGATCCTACATCTGTTGGA+GGG 0.641989 3_3:-69906054 Msa0468280:CDS
CCGATCCTACATCTGTTGGA+GGG 0.641989 3_3:-69910335 Msa0468280:CDS
CAACTGGTGTATGCTTATGA+CGG 0.648143 3_3:+69905035 None:intergenic
CAACTGGTGTATGCTTATGA+CGG 0.648143 3_3:+69909316 None:intergenic
TAACGTCCAGGCATAGTTGG+GGG 0.648794 3_3:+69904679 None:intergenic
TTGTTCACGGCATATGGTGA+AGG 0.648890 3_3:+69905088 None:intergenic
TTGTTCACGGCATATGGTGA+AGG 0.648890 3_3:+69909369 None:intergenic
GAAGAGTTTCCAGAAAGACC+TGG 0.657339 3_3:-69905013 Msa0468280:CDS
GAAGAGTTTCCAGAAAGACC+TGG 0.657339 3_3:-69909294 Msa0468280:CDS
TTCACAGTATGTGATGACAA+GGG 0.658008 3_3:-69911881 None:intergenic
ACTGATGTTGATGAAGTGAG+TGG 0.661166 3_3:-69907670 Msa0468280:CDS
TGATGAGAATGTGAATGAGA+AGG 0.672400 3_3:-69907698 Msa0468280:CDS
CCATGCAACCTAAGTGACAA+GGG 0.676957 3_3:-69904893 Msa0468280:CDS
CATGATGATGATGGTTGGAG+TGG 0.678716 3_3:-69907562 Msa0468280:CDS
CAGTATGTGAGAAGGGACAA+GGG 0.679158 3_3:-69907597 Msa0468280:intron
GAGCTGAACAGTATCCATTG+AGG 0.685815 3_3:-69907468 Msa0468280:CDS
GAGCTGAACAGTATCCATTG+AGG 0.685815 3_3:-69911753 Msa0468280:CDS
AAACTCGGCTAGTATTGAGG+AGG 0.710931 3_3:-69904638 Msa0468280:CDS
TTGTCACTTAGGTTGCATGG+AGG 0.747188 3_3:+69904896 None:intergenic
TTGTCACTTAGGTTGCATGG+AGG 0.747188 3_3:+69909177 None:intergenic
CCATTCCAGTCAGAACTTCG+GGG 0.756262 3_3:+69905881 None:intergenic
CCATTCCAGTCAGAACTTCG+GGG 0.756262 3_3:+69910162 None:intergenic
TGATTGGATTGAGAATGAGG+TGG 0.762353 3_3:-69907524 Msa0468280:CDS
TGATTGGATTGAGAATGAGG+TGG 0.762353 3_3:-69911809 Msa0468280:CDS
TTTCTGGTAGAAGACCATGG+GGG 0.864818 3_3:+69905962 None:intergenic
TTTCTGGTAGAAGACCATGG+GGG 0.864818 3_3:+69910243 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATAATTTTCTTTGTAAAAA+TGG - chr3_3:69907456-69907475 Msa0468280:CDS 10.0%
!! TTACTCATTATTATTATTTG+TGG - chr3_3:69904435-69904454 Msa0468280:three_prime_UTR 15.0%
!!! AAACTTTTAAAACTAAATGA+AGG - chr3_3:69904597-69904616 Msa0468280:exon 15.0%
!!! TGTACATTTTTTTATATCAT+CGG - chr3_3:69905940-69905959 Msa0468280:CDS 15.0%
!!! ATATTTTACAAAGAAAAAAG+TGG + chr3_3:69907651-69907670 None:intergenic 15.0%
!!! ACTTTTTTCTTTGTAAAATA+TGG - chr3_3:69907650-69907669 Msa0468280:CDS 15.0%
!! TCTAAATACATTTATTTAAG+AGG + chr3_3:69907719-69907738 None:intergenic 15.0%
!!! TTTTATTTGAGGAAAATAAA+AGG + chr3_3:69907979-69907998 None:intergenic 15.0%
!! TTACTCATTATTATTATTTG+TGG - chr3_3:69904435-69904454 Msa0468280:three_prime_UTR 15.0%
!!! AAAACTTTTAAAACTAAATG+AGG - chr3_3:69904596-69904615 Msa0468280:exon 15.0%
!!! TGTACATTTTTTTATATCAT+CGG - chr3_3:69905940-69905959 Msa0468280:CDS 15.0%
!!! ATTTTCTTGTTTATGTATTA+TGG - chr3_3:69911728-69911747 Msa0468280:CDS 15.0%
!! TGCATTCATTTATGTATATT+AGG - chr3_3:69904481-69904500 Msa0468280:three_prime_UTR 20.0%
!!! TTTTTCTGACATAATTTACT+CGG + chr3_3:69905102-69905121 None:intergenic 20.0%
!!! TTTGCTATATTGAAAAATGT+TGG - chr3_3:69905210-69905229 Msa0468280:intron 20.0%
!! GTTATAATCTAAATAATAGC+AGG + chr3_3:69905320-69905339 None:intergenic 20.0%
!!! AAACTTTTTTCTCTCTTTTT+AGG - chr3_3:69906140-69906159 Msa0468280:intron 20.0%
!! AAATGCAAGTAATATACTTA+AGG - chr3_3:69906387-69906406 Msa0468280:intron 20.0%
!! TCATAAGAATAATTAACTGA+CGG + chr3_3:69906549-69906568 None:intergenic 20.0%
!! AAGATGAAAATCACAAAATA+TGG + chr3_3:69907236-69907255 None:intergenic 20.0%
!!! ATTACTTTATTTAACTTCAC+TGG - chr3_3:69907263-69907282 Msa0468280:intron 20.0%
!!! ATACCATTTCTCTTATTTAA+AGG + chr3_3:69907528-69907547 None:intergenic 20.0%
!!! TCTTATTTGATAAACCAATT+TGG + chr3_3:69907694-69907713 None:intergenic 20.0%
!! TCAATCAAATTTCAACTATT+AGG - chr3_3:69908032-69908051 Msa0468280:intron 20.0%
!! CAATCAAATTTCAACTATTA+GGG - chr3_3:69908033-69908052 Msa0468280:intron 20.0%
!! TGCATTCATTTATGTATATT+AGG - chr3_3:69904481-69904500 Msa0468280:three_prime_UTR 20.0%
!!! TTTTTCTGACATAATTTACT+CGG + chr3_3:69905102-69905121 None:intergenic 20.0%
!!! TTTGCTATATTGAAAAATGT+TGG - chr3_3:69905210-69905229 Msa0468280:intron 20.0%
!! GTTATAATCTAAATAATAGC+AGG + chr3_3:69905320-69905339 None:intergenic 20.0%
!!! AAACTTTTTTCTCTCTTTTT+AGG - chr3_3:69906140-69906159 Msa0468280:intron 20.0%
!! AAATGCAAGTAATATACTTA+AGG - chr3_3:69906387-69906406 Msa0468280:intron 20.0%
!! TCATAAGAATAATTAACTGA+CGG + chr3_3:69906549-69906568 None:intergenic 20.0%
!! AAGATGAAAATCACAAAATA+TGG + chr3_3:69907236-69907255 None:intergenic 20.0%
!!! ATTACTTTATTTAACTTCAC+TGG - chr3_3:69907263-69907282 Msa0468280:intron 20.0%
!! TGTTCTTTTTATCTTAAGAC+TGG - chr3_3:69904318-69904337 Msa0468280:three_prime_UTR 25.0%
! TCTTATATGTTATAGCATAG+CGG - chr3_3:69904925-69904944 Msa0468280:CDS 25.0%
!!! TTTTTCAATATAGCAAAGCT+AGG + chr3_3:69905207-69905226 None:intergenic 25.0%
! TACTGTCATATCATAACATT+AGG + chr3_3:69905360-69905379 None:intergenic 25.0%
! GACATTGTATGATAGAAAAT+TGG + chr3_3:69905988-69906007 None:intergenic 25.0%
! GTATAGTTAATACTGAGTTA+TGG - chr3_3:69906065-69906084 Msa0468280:CDS 25.0%
!!! ATTTTTTAGTAATTGCCCTT+AGG - chr3_3:69906270-69906289 Msa0468280:intron 25.0%
!!! TTTTTTAGTAATTGCCCTTA+GGG - chr3_3:69906271-69906290 Msa0468280:intron 25.0%
! GTCAGTTAATTATTCTTATG+AGG - chr3_3:69906548-69906567 Msa0468280:intron 25.0%
!! GACCAATTTGTATTTTGTAT+AGG - chr3_3:69906606-69906625 Msa0468280:intron 25.0%
! TGCCTATACAAAATACAAAT+TGG + chr3_3:69906611-69906630 None:intergenic 25.0%
! ATCAGAGTAAAATAACTTAC+AGG + chr3_3:69906898-69906917 None:intergenic 25.0%
! AAATGTTAGATCAAAGAAAC+TGG + chr3_3:69906947-69906966 None:intergenic 25.0%
! TTTAATATCTCGTGAAATTC+AGG - chr3_3:69906964-69906983 Msa0468280:intron 25.0%
! TTAATATCTCGTGAAATTCA+GGG - chr3_3:69906965-69906984 Msa0468280:intron 25.0%
! CAAATTTGCAAATTCCATAT+CGG + chr3_3:69907015-69907034 None:intergenic 25.0%
!! GATTGAAACATTTTCTATCA+AGG - chr3_3:69907182-69907201 Msa0468280:intron 25.0%
!! ATTTTCTATCAAGGATCTTA+TGG - chr3_3:69907191-69907210 Msa0468280:intron 25.0%
! TGAAAATCACAAAATATGGA+TGG + chr3_3:69907232-69907251 None:intergenic 25.0%
! TACAAAGAAAAAAGTGGTAT+TGG + chr3_3:69907645-69907664 None:intergenic 25.0%
!! TGTTCTTTTTATCTTAAGAC+TGG - chr3_3:69904318-69904337 Msa0468280:three_prime_UTR 25.0%
! TCTTATATGTTATAGCATAG+CGG - chr3_3:69904925-69904944 Msa0468280:CDS 25.0%
!!! TTTTTCAATATAGCAAAGCT+AGG + chr3_3:69905207-69905226 None:intergenic 25.0%
! TACTGTCATATCATAACATT+AGG + chr3_3:69905360-69905379 None:intergenic 25.0%
! GACATTGTATGATAGAAAAT+TGG + chr3_3:69905988-69906007 None:intergenic 25.0%
! GTATAGTTAATACTGAGTTA+TGG - chr3_3:69906065-69906084 Msa0468280:CDS 25.0%
! GTCAGTTAATTATTCTTATG+AGG - chr3_3:69906548-69906567 Msa0468280:intron 25.0%
!! GACCAATTTGTATTTTGTAT+AGG - chr3_3:69906606-69906625 Msa0468280:intron 25.0%
! TGCCTATACAAAATACAAAT+TGG + chr3_3:69906611-69906630 None:intergenic 25.0%
! ATCAGAGTAAAATAACTTAC+AGG + chr3_3:69906898-69906917 None:intergenic 25.0%
! AAATGTTAGATCAAAGAAAC+TGG + chr3_3:69906947-69906966 None:intergenic 25.0%
! TTTAATATCTCGTGAAATTC+AGG - chr3_3:69906964-69906983 Msa0468280:intron 25.0%
! TTAATATCTCGTGAAATTCA+GGG - chr3_3:69906965-69906984 Msa0468280:intron 25.0%
! CAAATTTGCAAATTCCATAT+CGG + chr3_3:69907015-69907034 None:intergenic 25.0%
!! GATTGAAACATTTTCTATCA+AGG - chr3_3:69907182-69907201 Msa0468280:intron 25.0%
!! ATTTTCTATCAAGGATCTTA+TGG - chr3_3:69907191-69907210 Msa0468280:intron 25.0%
! TGAAAATCACAAAATATGGA+TGG + chr3_3:69907232-69907251 None:intergenic 25.0%
! ACTAAAGTTCAACATTTCAT+TGG + chr3_3:69911757-69911776 None:intergenic 25.0%
!! TTTTCCAAAAATCTCTTAAC+AGG + chr3_3:69911820-69911839 None:intergenic 25.0%
!!! AAGAGATTTTTGGAAAAATC+AGG - chr3_3:69911823-69911842 Msa0468280:CDS 25.0%
!! TTGTTTAGTTTACTTGAAAC+AGG + chr3_3:69911853-69911872 None:intergenic 25.0%
! TATGTTGATGAAAGAAGCAA+TGG - chr3_3:69904255-69904274 Msa0468280:three_prime_UTR 30.0%
!! AAATGAAGGTTTTTAGAGAG+AGG - chr3_3:69904611-69904630 Msa0468280:CDS 30.0%
!! AATGAAGGTTTTTAGAGAGA+GGG - chr3_3:69904612-69904631 Msa0468280:CDS 30.0%
AAAATACCTTGCATTCTATC+TGG + chr3_3:69904672-69904691 None:intergenic 30.0%
! TTTTATGAATGCCTTGACTA+TGG - chr3_3:69904741-69904760 Msa0468280:CDS 30.0%
TGTTGTCAAATAGACTATAG+CGG - chr3_3:69904995-69905014 Msa0468280:CDS 30.0%
ATCAATTATGAATATGCTGC+TGG - chr3_3:69905145-69905164 Msa0468280:intron 30.0%
TGACAGTATTATTCAAGATC+TGG - chr3_3:69905372-69905391 Msa0468280:intron 30.0%
GACAGTATTATTCAAGATCT+GGG - chr3_3:69905373-69905392 Msa0468280:intron 30.0%
ACAGTATTATTCAAGATCTG+GGG - chr3_3:69905374-69905393 Msa0468280:intron 30.0%
AAAGCTTATACCAAACGAAT+AGG + chr3_3:69905489-69905508 None:intergenic 30.0%
! AGCAGTTTCATTGAATTTTC+TGG + chr3_3:69905809-69905828 None:intergenic 30.0%
!! TGACTTTTAAGTAACTGATG+TGG + chr3_3:69906121-69906140 None:intergenic 30.0%
! GTACTTAATCTGAAATGATG+TGG + chr3_3:69906208-69906227 None:intergenic 30.0%
CATTTCAGATTAAGTACCTT+TGG - chr3_3:69906211-69906230 Msa0468280:intron 30.0%
CAAAACAACGAATAATAGAG+AGG + chr3_3:69906488-69906507 None:intergenic 30.0%
AGAATAATTAACTGACGGAA+AGG + chr3_3:69906544-69906563 None:intergenic 30.0%
GTTAATTATTCTTATGAGGC+AGG - chr3_3:69906552-69906571 Msa0468280:intron 30.0%
TACAAATTGGTCAAATTGCT+GGG + chr3_3:69906598-69906617 None:intergenic 30.0%
ATACAAATTGGTCAAATTGC+TGG + chr3_3:69906599-69906618 None:intergenic 30.0%
TTTAAGAAGAAACTGCATTC+AGG + chr3_3:69906769-69906788 None:intergenic 30.0%
TGCAGTTTCTTCTTAAAAAC+CGG - chr3_3:69906772-69906791 Msa0468280:intron 30.0%
TGGATGATGAAATTTGCAAT+GGG + chr3_3:69906815-69906834 None:intergenic 30.0%
TTGGATGATGAAATTTGCAA+TGG + chr3_3:69906816-69906835 None:intergenic 30.0%
AATTTCATCATCCAAAGAAC+CGG - chr3_3:69906821-69906840 Msa0468280:intron 30.0%
! AATTTTGTAATCCGGTTCTT+TGG + chr3_3:69906835-69906854 None:intergenic 30.0%
! ATGGAGGTAATTTTGTAATC+CGG + chr3_3:69906843-69906862 None:intergenic 30.0%
AAATAACTTACAGGTCTCAA+AGG + chr3_3:69906889-69906908 None:intergenic 30.0%
CGATATGGAATTTGCAAATT+TGG - chr3_3:69907013-69907032 Msa0468280:intron 30.0%
! GCAACAATTTAATAGCTTTG+AGG - chr3_3:69907160-69907179 Msa0468280:intron 30.0%
ATATATAGCTATTCCGCAAA+AGG + chr3_3:69907310-69907329 None:intergenic 30.0%
CTTTGTAAAAATGGTTGTCA+AGG - chr3_3:69907465-69907484 Msa0468280:CDS 30.0%
GCTCCTTTAAATAAGAGAAA+TGG - chr3_3:69907522-69907541 Msa0468280:CDS 30.0%
TTGCAAAAGTTGTCACTAAA+TGG + chr3_3:69907559-69907578 None:intergenic 30.0%
ACTTTATCTCTCTATTGCTA+TGG - chr3_3:69907611-69907630 Msa0468280:intron 30.0%
!! AGAAAAAAGTGGTATTGGTA+CGG + chr3_3:69907640-69907659 None:intergenic 30.0%
CAAATAAGTTGTCACCAAAT+TGG - chr3_3:69907677-69907696 Msa0468280:CDS 30.0%
! CAACTTCAACATTTGGATTT+TGG + chr3_3:69907788-69907807 None:intergenic 30.0%
ATCCAAATGTTGAAGTTGAA+CGG - chr3_3:69907790-69907809 Msa0468280:intron 30.0%
GATTAATTAATGCGATGATG+TGG + chr3_3:69907879-69907898 None:intergenic 30.0%
TGTTACATCATTGTAGTAGT+TGG + chr3_3:69907919-69907938 None:intergenic 30.0%
TTGAAAGAGTGAGAGAAATA+AGG + chr3_3:69908009-69908028 None:intergenic 30.0%
!!! TAGGGTTTCTTTTTGAAATG+TGG - chr3_3:69908051-69908070 Msa0468280:intron 30.0%
!!! GTTTCTTTTTGAAATGTGGA+GGG - chr3_3:69908055-69908074 Msa0468280:intron 30.0%
TCAACAATCTCAATCACATT+TGG - chr3_3:69908101-69908120 Msa0468280:intron 30.0%
GTCAATTGATTGAGATATGA+GGG + chr3_3:69908180-69908199 None:intergenic 30.0%
!! AAAGGTTCAAACTTTGAAGT+TGG - chr3_3:69908261-69908280 Msa0468280:intron 30.0%
!! TGCTGTTCTAGAATTTGATA+AGG - chr3_3:69908293-69908312 Msa0468280:intron 30.0%
!! GCTGTTCTAGAATTTGATAA+GGG - chr3_3:69908294-69908313 Msa0468280:intron 30.0%
! TATGTTGATGAAAGAAGCAA+TGG - chr3_3:69904255-69904274 Msa0468280:three_prime_UTR 30.0%
!! TAAATGAGGTTTTTAGAGAG+AGG - chr3_3:69908895-69908914 Msa0468280:intron 30.0%
!! AAATGAGGTTTTTAGAGAGA+GGG - chr3_3:69908896-69908915 Msa0468280:intron 30.0%
AAAATACCTTGCATTCTATC+TGG + chr3_3:69904672-69904691 None:intergenic 30.0%
! TTTTATGAATGCCTTGACTA+TGG - chr3_3:69904741-69904760 Msa0468280:CDS 30.0%
TGTTGTCAAATAGACTATAG+CGG - chr3_3:69904995-69905014 Msa0468280:CDS 30.0%
ATCAATTATGAATATGCTGC+TGG - chr3_3:69905145-69905164 Msa0468280:intron 30.0%
TGACAGTATTATTCAAGATC+TGG - chr3_3:69905372-69905391 Msa0468280:intron 30.0%
GACAGTATTATTCAAGATCT+GGG - chr3_3:69905373-69905392 Msa0468280:intron 30.0%
ACAGTATTATTCAAGATCTG+GGG - chr3_3:69905374-69905393 Msa0468280:intron 30.0%
AAAGCTTATACCAAACGAAT+AGG + chr3_3:69905489-69905508 None:intergenic 30.0%
! AGCAGTTTCATTGAATTTTC+TGG + chr3_3:69905809-69905828 None:intergenic 30.0%
!! TGACTTTTAAGTAACTGATG+TGG + chr3_3:69906121-69906140 None:intergenic 30.0%
! GTACTTAATCTGAAATGATG+TGG + chr3_3:69906208-69906227 None:intergenic 30.0%
CATTTCAGATTAAGTACCTT+TGG - chr3_3:69906211-69906230 Msa0468280:intron 30.0%
! ATTTGTTAGTAATTGCCCTT+AGG - chr3_3:69910552-69910571 Msa0468280:intron 30.0%
TTTGTTAGTAATTGCCCTTA+GGG - chr3_3:69910553-69910572 Msa0468280:intron 30.0%
CAAAACAACGAATAATAGAG+AGG + chr3_3:69906488-69906507 None:intergenic 30.0%
AGAATAATTAACTGACGGAA+AGG + chr3_3:69906544-69906563 None:intergenic 30.0%
GTTAATTATTCTTATGAGGC+AGG - chr3_3:69906552-69906571 Msa0468280:intron 30.0%
ATACAAATTGGTCAAATTGC+TGG + chr3_3:69906599-69906618 None:intergenic 30.0%
TTTAAGAAGAAACTGCATTC+AGG + chr3_3:69906769-69906788 None:intergenic 30.0%
TGCAGTTTCTTCTTAAAAAC+CGG - chr3_3:69906772-69906791 Msa0468280:intron 30.0%
TGGATGATGAAATTTGCAAT+GGG + chr3_3:69906815-69906834 None:intergenic 30.0%
TTGGATGATGAAATTTGCAA+TGG + chr3_3:69906816-69906835 None:intergenic 30.0%
AATTTCATCATCCAAAGAAC+CGG - chr3_3:69906821-69906840 Msa0468280:intron 30.0%
! AATTTTGTAATCCGGTTCTT+TGG + chr3_3:69906835-69906854 None:intergenic 30.0%
! ATGGAGGTAATTTTGTAATC+CGG + chr3_3:69906843-69906862 None:intergenic 30.0%
AAATAACTTACAGGTCTCAA+AGG + chr3_3:69906889-69906908 None:intergenic 30.0%
CGATATGGAATTTGCAAATT+TGG - chr3_3:69907013-69907032 Msa0468280:intron 30.0%
! GCAACAATTTAATAGCTTTG+AGG - chr3_3:69907160-69907179 Msa0468280:intron 30.0%
ATATATAGCTATTCCGCAAA+AGG + chr3_3:69907310-69907329 None:intergenic 30.0%
!! TATCTCTCTTGGATTAGTAT+TGG - chr3_3:69911665-69911684 Msa0468280:CDS 30.0%
ATTGGATTATATAGTTGTGC+TGG - chr3_3:69911683-69911702 Msa0468280:CDS 30.0%
CAAAAGAACTGCTCAATTAA+TGG - chr3_3:69911782-69911801 Msa0468280:CDS 30.0%
! TCATCAGTTCATGATGATGA+TGG - chr3_3:69904177-69904196 Msa0468280:three_prime_UTR 35.0%
ATGATTATGTGGTGAGTGAT+TGG - chr3_3:69904208-69904227 Msa0468280:three_prime_UTR 35.0%
AAGACTGGAACTTGCAAATT+TGG - chr3_3:69904333-69904352 Msa0468280:three_prime_UTR 35.0%
GAACATAAGAAAGTGATACC+TGG + chr3_3:69904398-69904417 None:intergenic 35.0%
! AGTAAGAGTGTACTAGAAAG+AGG + chr3_3:69904420-69904439 None:intergenic 35.0%
GATTGTGTAAGGTTAACTCT+AGG - chr3_3:69904830-69904849 Msa0468280:intron 35.0%
AGCTCAGTATTGTCAAATAG+CGG - chr3_3:69904891-69904910 Msa0468280:CDS 35.0%
TATTGTCAAATAGCGGCTAT+AGG - chr3_3:69904898-69904917 Msa0468280:CDS 35.0%
ATTGTCAAATAGCGGCTATA+GGG - chr3_3:69904899-69904918 Msa0468280:CDS 35.0%
TTGTCAATCACGGAAAATAG+TGG + chr3_3:69905057-69905076 None:intergenic 35.0%
ATAGGTAGTGTTGTCAATCA+CGG + chr3_3:69905067-69905086 None:intergenic 35.0%
TGAATATGCTGCTGGAATAA+TGG - chr3_3:69905153-69905172 Msa0468280:intron 35.0%
GAATATGCTGCTGGAATAAT+GGG - chr3_3:69905154-69905173 Msa0468280:intron 35.0%
AAACTTTCGTTGTTGTATCC+TGG - chr3_3:69905181-69905200 Msa0468280:intron 35.0%
ACAAGTTTAAGAAATGGCTC+AGG + chr3_3:69905297-69905316 None:intergenic 35.0%
AGCAGGACAAGTTTAAGAAA+TGG + chr3_3:69905303-69905322 None:intergenic 35.0%
CAGTATTATTCAAGATCTGG+GGG - chr3_3:69905375-69905394 Msa0468280:intron 35.0%
TGTAAATTTGATCACACCAG+AGG - chr3_3:69905417-69905436 Msa0468280:intron 35.0%
! GTTTTACAGCTTAACTTCCT+TGG - chr3_3:69905459-69905478 Msa0468280:intron 35.0%
CTTATACCAAACGAATAGGT+AGG + chr3_3:69905485-69905504 None:intergenic 35.0%
TCCAAACTTACAAGAAGAAC+CGG + chr3_3:69905656-69905675 None:intergenic 35.0%
!! TATGACTCCACTTTAGGATA+TGG - chr3_3:69905721-69905740 Msa0468280:intron 35.0%
!! TCCACTTTAGGATATGGTAA+TGG - chr3_3:69905727-69905746 Msa0468280:intron 35.0%
TCCATTACCATATCCTAAAG+TGG + chr3_3:69905731-69905750 None:intergenic 35.0%
!! ATTTTCTGGTAGAAGACCAT+GGG + chr3_3:69905795-69905814 None:intergenic 35.0%
!! AATTTTCTGGTAGAAGACCA+TGG + chr3_3:69905796-69905815 None:intergenic 35.0%
GAAATTATGATTGGCGCAAA+AGG + chr3_3:69905832-69905851 None:intergenic 35.0%
TACAATGTCAATGTTTCCTG+TGG - chr3_3:69905999-69906018 Msa0468280:intron 35.0%
ATTATTGACAACTGTGGACT+AGG + chr3_3:69906025-69906044 None:intergenic 35.0%
TTACACGTCAAACTATCACT+TGG + chr3_3:69906429-69906448 None:intergenic 35.0%
! AACGAATAATAGAGAGGTGT+AGG + chr3_3:69906482-69906501 None:intergenic 35.0%
!! CACCTTTCTATTTTTCTGAG+AGG - chr3_3:69906629-69906648 Msa0468280:intron 35.0%
CTCCTCTCAGAAAAATAGAA+AGG + chr3_3:69906634-69906653 None:intergenic 35.0%
GCAGTTTCTTCTTAAAAACC+GGG - chr3_3:69906773-69906792 Msa0468280:intron 35.0%
CAGTTTCTTCTTAAAAACCG+GGG - chr3_3:69906774-69906793 Msa0468280:intron 35.0%
GGATTTAAATTTGCAATCCC+CGG + chr3_3:69906794-69906813 None:intergenic 35.0%
TGTAAAAATGGTTGTCAAGG+TGG - chr3_3:69907468-69907487 Msa0468280:CDS 35.0%
CATCATTGTAGTAGTTGGTT+TGG + chr3_3:69907914-69907933 None:intergenic 35.0%
!!! AAGGTTGTGGGTTTTATTTG+AGG + chr3_3:69907990-69908009 None:intergenic 35.0%
AGTGAGAGAAATAAGGTTGT+GGG + chr3_3:69908002-69908021 None:intergenic 35.0%
!!! GGTTTCTTTTTGAAATGTGG+AGG - chr3_3:69908054-69908073 Msa0468280:intron 35.0%
TGTGATTGAGATTGTTGAGA+CGG + chr3_3:69908099-69908118 None:intergenic 35.0%
GGTCAATTGATTGAGATATG+AGG + chr3_3:69908181-69908200 None:intergenic 35.0%
! CAAGTTGGATTTGAAAGATG+AGG - chr3_3:69908224-69908243 Msa0468280:intron 35.0%
TTGGATTTGAAAGATGAGGA+TGG - chr3_3:69908228-69908247 Msa0468280:intron 35.0%
TGATGAGAATGTGAATGAGA+AGG - chr3_3:69908335-69908354 Msa0468280:intron 35.0%
! GTGAGTGGAATTGATGATAA+AGG - chr3_3:69908378-69908397 Msa0468280:intron 35.0%
! CATCAAGTTCATGATGATGA+TGG - chr3_3:69908462-69908481 Msa0468280:intron 35.0%
!! AAGTTCATGATGATGATGGT+TGG - chr3_3:69908466-69908485 Msa0468280:intron 35.0%
AAGACTGGAACTTGCAAATT+TGG - chr3_3:69904333-69904352 Msa0468280:three_prime_UTR 35.0%
GAACATAAGAAAGTGATACC+TGG + chr3_3:69904398-69904417 None:intergenic 35.0%
! AGTAAGAGTGTACTAGAAAG+AGG + chr3_3:69904420-69904439 None:intergenic 35.0%
GATTGTGTAAGGTTAACTCT+AGG - chr3_3:69904830-69904849 Msa0468280:intron 35.0%
AGCTCAGTATTGTCAAATAG+CGG - chr3_3:69904891-69904910 Msa0468280:CDS 35.0%
TATTGTCAAATAGCGGCTAT+AGG - chr3_3:69904898-69904917 Msa0468280:CDS 35.0%
ATTGTCAAATAGCGGCTATA+GGG - chr3_3:69904899-69904918 Msa0468280:CDS 35.0%
TTGTCAATCACGGAAAATAG+TGG + chr3_3:69905057-69905076 None:intergenic 35.0%
ATAGGTAGTGTTGTCAATCA+CGG + chr3_3:69905067-69905086 None:intergenic 35.0%
TGAATATGCTGCTGGAATAA+TGG - chr3_3:69905153-69905172 Msa0468280:intron 35.0%
GAATATGCTGCTGGAATAAT+GGG - chr3_3:69905154-69905173 Msa0468280:intron 35.0%
AAACTTTCGTTGTTGTATCC+TGG - chr3_3:69905181-69905200 Msa0468280:intron 35.0%
ACAAGTTTAAGAAATGGCTC+AGG + chr3_3:69905297-69905316 None:intergenic 35.0%
AGCAGGACAAGTTTAAGAAA+TGG + chr3_3:69905303-69905322 None:intergenic 35.0%
CAGTATTATTCAAGATCTGG+GGG - chr3_3:69905375-69905394 Msa0468280:intron 35.0%
TGTAAATTTGATCACACCAG+AGG - chr3_3:69905417-69905436 Msa0468280:intron 35.0%
! GTTTTACAGCTTAACTTCCT+TGG - chr3_3:69905459-69905478 Msa0468280:intron 35.0%
CTTATACCAAACGAATAGGT+AGG + chr3_3:69905485-69905504 None:intergenic 35.0%
!! TATGACTCCACTTTAGGATA+TGG - chr3_3:69905721-69905740 Msa0468280:intron 35.0%
!! TCCACTTTAGGATATGGTAA+TGG - chr3_3:69905727-69905746 Msa0468280:intron 35.0%
TCCATTACCATATCCTAAAG+TGG + chr3_3:69905731-69905750 None:intergenic 35.0%
!! ATTTTCTGGTAGAAGACCAT+GGG + chr3_3:69905795-69905814 None:intergenic 35.0%
!! AATTTTCTGGTAGAAGACCA+TGG + chr3_3:69905796-69905815 None:intergenic 35.0%
GAAATTATGATTGGCGCAAA+AGG + chr3_3:69905832-69905851 None:intergenic 35.0%
TACAATGTCAATGTTTCCTG+TGG - chr3_3:69905999-69906018 Msa0468280:intron 35.0%
ATTATTGACAACTGTGGACT+AGG + chr3_3:69906025-69906044 None:intergenic 35.0%
TTACACGTCAAACTATCACT+TGG + chr3_3:69906429-69906448 None:intergenic 35.0%
! AACGAATAATAGAGAGGTGT+AGG + chr3_3:69906482-69906501 None:intergenic 35.0%
TTGGTCAAATTGCTGGAAAA+TGG + chr3_3:69910873-69910892 None:intergenic 35.0%
!! CACCTTTCTATTTTTCTGAG+AGG - chr3_3:69906629-69906648 Msa0468280:intron 35.0%
CTCCTCTCAGAAAAATAGAA+AGG + chr3_3:69906634-69906653 None:intergenic 35.0%
GCAGTTTCTTCTTAAAAACC+GGG - chr3_3:69906773-69906792 Msa0468280:intron 35.0%
CAGTTTCTTCTTAAAAACCG+GGG - chr3_3:69906774-69906793 Msa0468280:intron 35.0%
GGATTTAAATTTGCAATCCC+CGG + chr3_3:69906794-69906813 None:intergenic 35.0%
! AGCAGCTGTAGATTATCTTT+TGG - chr3_3:69911631-69911650 Msa0468280:intron 35.0%
!! TTCCAGTTTGTTATCTCTCT+TGG - chr3_3:69911654-69911673 Msa0468280:intron 35.0%
ATCCAAGAGAGATAACAAAC+TGG + chr3_3:69911659-69911678 None:intergenic 35.0%
! GTAGCCTGTTAAGAGATTTT+TGG - chr3_3:69911813-69911832 Msa0468280:CDS 35.0%
!! CAGTTCATGATGATGATGGT+TGG - chr3_3:69904181-69904200 Msa0468280:three_prime_UTR 40.0%
TGGTTGGAGTGATGATTATG+TGG - chr3_3:69904197-69904216 Msa0468280:three_prime_UTR 40.0%
GAGTGATTGGATTGAGAATG+AGG - chr3_3:69904221-69904240 Msa0468280:three_prime_UTR 40.0%
TGATTGGATTGAGAATGAGG+TGG - chr3_3:69904224-69904243 Msa0468280:three_prime_UTR 40.0%
! GTTGATGAAAGAAGCAATGG+TGG - chr3_3:69904258-69904277 Msa0468280:three_prime_UTR 40.0%
AAAGAACAGTCTTCAGCTTC+AGG + chr3_3:69904306-69904325 None:intergenic 40.0%
GCAAGTTTAATCACCCTGTT+TGG - chr3_3:69904364-69904383 Msa0468280:three_prime_UTR 40.0%
AGGAGAAAGAGATGAATTGG+AGG - chr3_3:69904636-69904655 Msa0468280:CDS 40.0%
ATCAAGCCAGATAGAATGCA+AGG - chr3_3:69904663-69904682 Msa0468280:CDS 40.0%
TTTCCATGGGAGATTGTGTA+AGG - chr3_3:69904819-69904838 Msa0468280:intron 40.0%
TAACCTTACACAATCTCCCA+TGG + chr3_3:69904825-69904844 None:intergenic 40.0%
TGTGTAAGGTTAACTCTAGG+AGG - chr3_3:69904833-69904852 Msa0468280:intron 40.0%
TTGTCAAATAGCGGCTATAG+GGG - chr3_3:69904900-69904919 Msa0468280:CDS 40.0%
ATCTGCTGAAAACTTTCCTC+TGG + chr3_3:69905436-69905455 None:intergenic 40.0%
!! TCAGCATAGCTTGCTAAGTA+AGG + chr3_3:69905515-69905534 None:intergenic 40.0%
! CAGCTATCTTTTTCTGCTGT+CGG - chr3_3:69905556-69905575 Msa0468280:intron 40.0%
AACAACGCGGCTAAAATTTC+AGG + chr3_3:69905591-69905610 None:intergenic 40.0%
CCCTATCATGAAAAACAACG+CGG + chr3_3:69905604-69905623 None:intergenic 40.0%
!!! CCGCGTTGTTTTTCATGATA+GGG - chr3_3:69905601-69905620 Msa0468280:intron 40.0%
! ACCGGTTCTTCTTGTAAGTT+TGG - chr3_3:69905652-69905671 Msa0468280:intron 40.0%
TAGATGATTGTGACACGTCT+TGG + chr3_3:69905768-69905787 None:intergenic 40.0%
!! TTTTCTGGTAGAAGACCATG+GGG + chr3_3:69905794-69905813 None:intergenic 40.0%
GGAGTCGGTGAAATTATGAT+TGG + chr3_3:69905841-69905860 None:intergenic 40.0%
!! ATCATAATTTCACCGACTCC+AGG - chr3_3:69905841-69905860 Msa0468280:intron 40.0%
!! TCATAATTTCACCGACTCCA+GGG - chr3_3:69905842-69905861 Msa0468280:intron 40.0%
ATCCATTCCAGTCAGAACTT+CGG + chr3_3:69905876-69905895 None:intergenic 40.0%
TTCTGACTGGAATGGATATC+AGG - chr3_3:69905879-69905898 Msa0468280:CDS 40.0%
CTGAGCATTATTGACAACTG+TGG + chr3_3:69906031-69906050 None:intergenic 40.0%
GAGTTATGGCATGATCTGTA+AGG - chr3_3:69906079-69906098 Msa0468280:CDS 40.0%
!! TCTCTTTTTAGGCTCTCTTG+TGG - chr3_3:69906151-69906170 Msa0468280:intron 40.0%
GATGTGGTTGTGCAATAGAA+TGG + chr3_3:69906192-69906211 None:intergenic 40.0%
GTGGTGAAGGAAACAACAAT+TGG - chr3_3:69906296-69906315 Msa0468280:CDS 40.0%
TGTTGCATGCCATTCTTATG+AGG - chr3_3:69906506-69906525 Msa0468280:intron 40.0%
AAATTGCTGGGAAAATGGCA+AGG + chr3_3:69906586-69906605 None:intergenic 40.0%
TGGTCAAATTGCTGGGAAAA+TGG + chr3_3:69906591-69906610 None:intergenic 40.0%
TTCCATAGCTGGATTGTTCA+CGG + chr3_3:69906680-69906699 None:intergenic 40.0%
TAAGCATTCGTTTCCATAGC+TGG + chr3_3:69906691-69906710 None:intergenic 40.0%
CAACTGGTGTATGCTTATGA+CGG + chr3_3:69906720-69906739 None:intergenic 40.0%
! CTTTCTGGAAACTCTTCAAC+TGG + chr3_3:69906736-69906755 None:intergenic 40.0%
! AACTGGTGACGTGTACATTA+GGG + chr3_3:69906930-69906949 None:intergenic 40.0%
! AAACTGGTGACGTGTACATT+AGG + chr3_3:69906931-69906950 None:intergenic 40.0%
TGTAATGAGTGCACACATTC+TGG + chr3_3:69906991-69907010 None:intergenic 40.0%
TGCACTCATTACAACCGATA+TGG - chr3_3:69906998-69907017 Msa0468280:intron 40.0%
ACAATCCTCTCACACAAACT+CGG - chr3_3:69907099-69907118 Msa0468280:CDS 40.0%
ATGATAATCTACAGCTGCTG+AGG + chr3_3:69907349-69907368 None:intergenic 40.0%
CAAATGTTGAAGTTGAACGG+CGG - chr3_3:69907793-69907812 Msa0468280:intron 40.0%
GAGTGAGAGAAATAAGGTTG+TGG + chr3_3:69908003-69908022 None:intergenic 40.0%
AGGATGATGATTGGAAACAG+GGG + chr3_3:69908154-69908173 None:intergenic 40.0%
CAGGATGATGATTGGAAACA+GGG + chr3_3:69908155-69908174 None:intergenic 40.0%
TCAGGATGATGATTGGAAAC+AGG + chr3_3:69908156-69908175 None:intergenic 40.0%
TGATTGAGATATGAGGGTTC+AGG + chr3_3:69908174-69908193 None:intergenic 40.0%
CTGAAGCTCATCATCAAGTT+GGG + chr3_3:69908202-69908221 None:intergenic 40.0%
! TCTGAAGCTCATCATCAAGT+TGG + chr3_3:69908203-69908222 None:intergenic 40.0%
TGATGAGCTTCAGAACAAGT+TGG - chr3_3:69908209-69908228 Msa0468280:intron 40.0%
GAAAGATGAGGATGGAATTG+AGG - chr3_3:69908236-69908255 Msa0468280:intron 40.0%
GAGGATGGAATTGAGGAAAA+AGG - chr3_3:69908243-69908262 Msa0468280:intron 40.0%
! ACTGATGTTGATGAAGTGAG+TGG - chr3_3:69908363-69908382 Msa0468280:intron 40.0%
GTGATTATGTGGTGAGTGAT+TGG - chr3_3:69908493-69908512 Msa0468280:intron 40.0%
GAGTGATTGGATTGAGAATG+AGG - chr3_3:69904221-69904240 Msa0468280:three_prime_UTR 40.0%
TGATTGGATTGAGAATGAGG+TGG - chr3_3:69904224-69904243 Msa0468280:three_prime_UTR 40.0%
! GTTGATGAAAGAAGCAATGG+TGG - chr3_3:69904258-69904277 Msa0468280:three_prime_UTR 40.0%
AAAGAACAGTCTTCAGCTTC+AGG + chr3_3:69904306-69904325 None:intergenic 40.0%
GCAAGTTTAATCACCCTGTT+TGG - chr3_3:69904364-69904383 Msa0468280:three_prime_UTR 40.0%
AGGAGAAAGAGATGAATTGG+AGG - chr3_3:69904636-69904655 Msa0468280:CDS 40.0%
ATCAAGCCAGATAGAATGCA+AGG - chr3_3:69904663-69904682 Msa0468280:CDS 40.0%
TTTCCATGGGAGATTGTGTA+AGG - chr3_3:69904819-69904838 Msa0468280:intron 40.0%
TAACCTTACACAATCTCCCA+TGG + chr3_3:69904825-69904844 None:intergenic 40.0%
TGTGTAAGGTTAACTCTAGG+AGG - chr3_3:69904833-69904852 Msa0468280:intron 40.0%
TTGTCAAATAGCGGCTATAG+GGG - chr3_3:69904900-69904919 Msa0468280:CDS 40.0%
ATCTGCTGAAAACTTTCCTC+TGG + chr3_3:69905436-69905455 None:intergenic 40.0%
!! TCAGCATAGCTTGCTAAGTA+AGG + chr3_3:69905515-69905534 None:intergenic 40.0%
! CAGCTATCTTTTTCTGCTGT+CGG - chr3_3:69905556-69905575 Msa0468280:intron 40.0%
AACAACGCGGCTAAAATTTC+AGG + chr3_3:69905591-69905610 None:intergenic 40.0%
CCCTATCATGAAAAACAACG+CGG + chr3_3:69905604-69905623 None:intergenic 40.0%
!!! CCGCGTTGTTTTTCATGATA+GGG - chr3_3:69905601-69905620 Msa0468280:intron 40.0%
TGCTCCAAACTTACAAGAAC+CGG + chr3_3:69909940-69909959 None:intergenic 40.0%
TAGATGATTGTGACACGTCT+TGG + chr3_3:69905768-69905787 None:intergenic 40.0%
!! TTTTCTGGTAGAAGACCATG+GGG + chr3_3:69905794-69905813 None:intergenic 40.0%
GGAGTCGGTGAAATTATGAT+TGG + chr3_3:69905841-69905860 None:intergenic 40.0%
!! ATCATAATTTCACCGACTCC+AGG - chr3_3:69905841-69905860 Msa0468280:intron 40.0%
!! TCATAATTTCACCGACTCCA+GGG - chr3_3:69905842-69905861 Msa0468280:intron 40.0%
ATCCATTCCAGTCAGAACTT+CGG + chr3_3:69905876-69905895 None:intergenic 40.0%
TTCTGACTGGAATGGATATC+AGG - chr3_3:69905879-69905898 Msa0468280:CDS 40.0%
CTGAGCATTATTGACAACTG+TGG + chr3_3:69906031-69906050 None:intergenic 40.0%
GAGTTATGGCATGATCTGTA+AGG - chr3_3:69906079-69906098 Msa0468280:CDS 40.0%
!! TCTCTTTTTAGGCTCTCTTG+TGG - chr3_3:69906151-69906170 Msa0468280:intron 40.0%
GATGTGGTTGTGCAATAGAA+TGG + chr3_3:69906192-69906211 None:intergenic 40.0%
GTGGTGAAGGAAACAACAAT+TGG - chr3_3:69906296-69906315 Msa0468280:CDS 40.0%
TGTTGCATGCCATTCTTATG+AGG - chr3_3:69906506-69906525 Msa0468280:intron 40.0%
CAAATTGCTGGAAAATGGCA+AGG + chr3_3:69910868-69910887 None:intergenic 40.0%
TTCCATAGCTGGATTGTTCA+CGG + chr3_3:69906680-69906699 None:intergenic 40.0%
TAAGCATTCGTTTCCATAGC+TGG + chr3_3:69906691-69906710 None:intergenic 40.0%
CAACTGGTGTATGCTTATGA+CGG + chr3_3:69906720-69906739 None:intergenic 40.0%
! CTTTCTGGAAACTCTTCAAC+TGG + chr3_3:69906736-69906755 None:intergenic 40.0%
! AACTGGTGACGTGTACATTA+GGG + chr3_3:69906930-69906949 None:intergenic 40.0%
! AAACTGGTGACGTGTACATT+AGG + chr3_3:69906931-69906950 None:intergenic 40.0%
TGTAATGAGTGCACACATTC+TGG + chr3_3:69906991-69907010 None:intergenic 40.0%
TGCACTCATTACAACCGATA+TGG - chr3_3:69906998-69907017 Msa0468280:intron 40.0%
ACAATCCTCTCACACAAACT+CGG - chr3_3:69907099-69907118 Msa0468280:CDS 40.0%
AAGATAATCTACAGCTGCTG+AGG + chr3_3:69911630-69911649 None:intergenic 40.0%
ATTGAGAATGAGGTGGTGAG+TGG - chr3_3:69904231-69904250 Msa0468280:three_prime_UTR 45.0%
GAGCTGAACAGTATCCATTG+AGG - chr3_3:69904280-69904299 Msa0468280:three_prime_UTR 45.0%
CCTGGTTTCTTCTCCAAACA+GGG + chr3_3:69904380-69904399 None:intergenic 45.0%
ACCTGGTTTCTTCTCCAAAC+AGG + chr3_3:69904381-69904400 None:intergenic 45.0%
!! AAGGTTTTTAGAGAGAGGGC+AGG - chr3_3:69904616-69904635 Msa0468280:CDS 45.0%
GGCAGGAGAAAGAGATGAAT+TGG - chr3_3:69904633-69904652 Msa0468280:CDS 45.0%
ATCTCCCATGGAAAATCCCA+CGG + chr3_3:69904813-69904832 None:intergenic 45.0%
CAATATAGCAAAGCTAGGCC+AGG + chr3_3:69905202-69905221 None:intergenic 45.0%
AGATCTGGGGGTTGTAAGTT+TGG - chr3_3:69905387-69905406 Msa0468280:intron 45.0%
TGGGGGTTGTAAGTTTGGAA+AGG - chr3_3:69905392-69905411 Msa0468280:intron 45.0%
!!! GCCGCGTTGTTTTTCATGAT+AGG - chr3_3:69905600-69905619 Msa0468280:intron 45.0%
AACCGGTGCGCATGTAATAA+GGG + chr3_3:69905639-69905658 None:intergenic 45.0%
TCATACCCTCCAACAGATGT+AGG + chr3_3:69905706-69905725 None:intergenic 45.0%
! TTTCTGGTAGAAGACCATGG+GGG + chr3_3:69905793-69905812 None:intergenic 45.0%
!! CATAATTTCACCGACTCCAG+GGG - chr3_3:69905843-69905862 Msa0468280:intron 45.0%
TCCATTCCAGTCAGAACTTC+GGG + chr3_3:69905875-69905894 None:intergenic 45.0%
ACTTCTGAGCATGCATCCAA+AGG + chr3_3:69906230-69906249 None:intergenic 45.0%
AGTAATTGCCCTTAGGGTAG+TGG - chr3_3:69906277-69906296 Msa0468280:CDS 45.0%
TTCCTTCACCACTACCCTAA+GGG + chr3_3:69906288-69906307 None:intergenic 45.0%
TTTCCTTCACCACTACCCTA+AGG + chr3_3:69906289-69906308 None:intergenic 45.0%
TAACTGACGGAAAGGAACAG+AGG + chr3_3:69906536-69906555 None:intergenic 45.0%
TTGTTCACGGCATATGGTGA+AGG + chr3_3:69906667-69906686 None:intergenic 45.0%
GAAGAGTTTCCAGAAAGACC+TGG - chr3_3:69906739-69906758 Msa0468280:intron 45.0%
! AAACTGCATTCAGGTTCACC+AGG + chr3_3:69906760-69906779 None:intergenic 45.0%
! TTGTCACTTAGGTTGCATGG+AGG + chr3_3:69906859-69906878 None:intergenic 45.0%
TCCATGCAACCTAAGTGACA+AGG - chr3_3:69906858-69906877 Msa0468280:intron 45.0%
CCATGCAACCTAAGTGACAA+GGG - chr3_3:69906859-69906878 Msa0468280:intron 45.0%
ATAACGTCCAGGCATAGTTG+GGG + chr3_3:69907077-69907096 None:intergenic 45.0%
GATAACGTCCAGGCATAGTT+GGG + chr3_3:69907078-69907097 None:intergenic 45.0%
! TGATAACGTCCAGGCATAGT+TGG + chr3_3:69907079-69907098 None:intergenic 45.0%
!! GAGGATTGTTGATAACGTCC+AGG + chr3_3:69907088-69907107 None:intergenic 45.0%
CACAAACTCGGCTAGTATTG+AGG - chr3_3:69907111-69907130 Msa0468280:CDS 45.0%
! AAACTCGGCTAGTATTGAGG+AGG - chr3_3:69907114-69907133 Msa0468280:CDS 45.0%
! TTCACTGGTTATGCCTGATG+TGG - chr3_3:69907278-69907297 Msa0468280:intron 45.0%
CGCCGTTCAACTTCAACATT+TGG + chr3_3:69907795-69907814 None:intergenic 45.0%
! GATGATGTGGATTGTTGCGA+TGG + chr3_3:69907866-69907885 None:intergenic 45.0%
GATTGTTGAGACGGTTCCAT+TGG + chr3_3:69908090-69908109 None:intergenic 45.0%
TGAGGGTTCAGGATGATGAT+TGG + chr3_3:69908163-69908182 None:intergenic 45.0%
ATCTGCCACAGTATGTGAGA+AGG - chr3_3:69908428-69908447 Msa0468280:intron 45.0%
TCTGCCACAGTATGTGAGAA+GGG - chr3_3:69908429-69908448 Msa0468280:intron 45.0%
TTGTCCCTTCTCACATACTG+TGG + chr3_3:69908436-69908455 None:intergenic 45.0%
ACAGTATGTGAGAAGGGACA+AGG - chr3_3:69908435-69908454 Msa0468280:intron 45.0%
CAGTATGTGAGAAGGGACAA+GGG - chr3_3:69908436-69908455 Msa0468280:intron 45.0%
!! CATGATGATGATGGTTGGAG+TGG - chr3_3:69904186-69904205 Msa0468280:three_prime_UTR 45.0%
TGGTTGGAGTGGTGATTATG+TGG - chr3_3:69908482-69908501 Msa0468280:intron 45.0%
ATTGAGAATGAGGTGGTGAG+TGG - chr3_3:69904231-69904250 Msa0468280:three_prime_UTR 45.0%
GAGCTGAACAGTATCCATTG+AGG - chr3_3:69904280-69904299 Msa0468280:three_prime_UTR 45.0%
CCTGGTTTCTTCTCCAAACA+GGG + chr3_3:69904380-69904399 None:intergenic 45.0%
ACCTGGTTTCTTCTCCAAAC+AGG + chr3_3:69904381-69904400 None:intergenic 45.0%
GGCAGGAGAAAGAGATGAAT+TGG - chr3_3:69904633-69904652 Msa0468280:CDS 45.0%
ATCTCCCATGGAAAATCCCA+CGG + chr3_3:69904813-69904832 None:intergenic 45.0%
TGTCAAATAGCGGCTATAGG+GGG - chr3_3:69904901-69904920 Msa0468280:CDS 45.0%
CAATATAGCAAAGCTAGGCC+AGG + chr3_3:69905202-69905221 None:intergenic 45.0%
AGATCTGGGGGTTGTAAGTT+TGG - chr3_3:69905387-69905406 Msa0468280:intron 45.0%
TGGGGGTTGTAAGTTTGGAA+AGG - chr3_3:69905392-69905411 Msa0468280:intron 45.0%
!!! GCCGCGTTGTTTTTCATGAT+AGG - chr3_3:69905600-69905619 Msa0468280:intron 45.0%
AACCGGTGCGCATGTAATAA+GGG + chr3_3:69905639-69905658 None:intergenic 45.0%
TCATACCCTCCAACAGATGT+AGG + chr3_3:69905706-69905725 None:intergenic 45.0%
! TTTCTGGTAGAAGACCATGG+GGG + chr3_3:69905793-69905812 None:intergenic 45.0%
!! CATAATTTCACCGACTCCAG+GGG - chr3_3:69905843-69905862 Msa0468280:intron 45.0%
TCCATTCCAGTCAGAACTTC+GGG + chr3_3:69905875-69905894 None:intergenic 45.0%
ACTTCTGAGCATGCATCCAA+AGG + chr3_3:69906230-69906249 None:intergenic 45.0%
AGTAATTGCCCTTAGGGTAG+TGG - chr3_3:69906277-69906296 Msa0468280:CDS 45.0%
TTCCTTCACCACTACCCTAA+GGG + chr3_3:69906288-69906307 None:intergenic 45.0%
TTTCCTTCACCACTACCCTA+AGG + chr3_3:69906289-69906308 None:intergenic 45.0%
TAACTGACGGAAAGGAACAG+AGG + chr3_3:69906536-69906555 None:intergenic 45.0%
TGGAAAATGGCAAGGAAGAG+AGG + chr3_3:69910860-69910879 None:intergenic 45.0%
TTGTTCACGGCATATGGTGA+AGG + chr3_3:69906667-69906686 None:intergenic 45.0%
GAAGAGTTTCCAGAAAGACC+TGG - chr3_3:69906739-69906758 Msa0468280:intron 45.0%
! AAACTGCATTCAGGTTCACC+AGG + chr3_3:69906760-69906779 None:intergenic 45.0%
! TTGTCACTTAGGTTGCATGG+AGG + chr3_3:69906859-69906878 None:intergenic 45.0%
TCCATGCAACCTAAGTGACA+AGG - chr3_3:69906858-69906877 Msa0468280:intron 45.0%
CCATGCAACCTAAGTGACAA+GGG - chr3_3:69906859-69906878 Msa0468280:intron 45.0%
ATAACGTCCAGGCATAGTTG+GGG + chr3_3:69907077-69907096 None:intergenic 45.0%
GATAACGTCCAGGCATAGTT+GGG + chr3_3:69907078-69907097 None:intergenic 45.0%
! TGATAACGTCCAGGCATAGT+TGG + chr3_3:69907079-69907098 None:intergenic 45.0%
!! GAGGATTGTTGATAACGTCC+AGG + chr3_3:69907088-69907107 None:intergenic 45.0%
CACAAACTCGGCTAGTATTG+AGG - chr3_3:69907111-69907130 Msa0468280:CDS 45.0%
! AAACTCGGCTAGTATTGAGG+AGG - chr3_3:69907114-69907133 Msa0468280:CDS 45.0%
! TTCACTGGTTATGCCTGATG+TGG - chr3_3:69907278-69907297 Msa0468280:intron 45.0%
TCTTCAGCTTCAGGCCTCAA+TGG + chr3_3:69904297-69904316 None:intergenic 50.0%
CCCTGTTTGGAGAAGAAACC+AGG - chr3_3:69904377-69904396 Msa0468280:three_prime_UTR 50.0%
AATGCAAATTCCCTTGCCCG+TGG - chr3_3:69904793-69904812 Msa0468280:intron 50.0%
ATGCAAATTCCCTTGCCCGT+GGG - chr3_3:69904794-69904813 Msa0468280:intron 50.0%
ATGGAAAATCCCACGGGCAA+GGG + chr3_3:69904806-69904825 None:intergenic 50.0%
! TTGCCCGTGGGATTTTCCAT+GGG - chr3_3:69904806-69904825 Msa0468280:intron 50.0%
TCTCCCATGGAAAATCCCAC+GGG + chr3_3:69904812-69904831 None:intergenic 50.0%
ACTCGGTCGAACTCAAGCAT+AGG + chr3_3:69905085-69905104 None:intergenic 50.0%
CCAAACGAATAGGTAGGCCA+AGG + chr3_3:69905479-69905498 None:intergenic 50.0%
CCTTGGCCTACCTATTCGTT+TGG - chr3_3:69905476-69905495 Msa0468280:intron 50.0%
CGCGGCTAAAATTTCAGGAC+AGG + chr3_3:69905586-69905605 None:intergenic 50.0%
TGCCCTTATTACATGCGCAC+CGG - chr3_3:69905634-69905653 Msa0468280:intron 50.0%
GAACCGGTGCGCATGTAATA+AGG + chr3_3:69905640-69905659 None:intergenic 50.0%
CATCCCGATCCTACATCTGT+TGG - chr3_3:69905694-69905713 Msa0468280:intron 50.0%
CCTCCAACAGATGTAGGATC+GGG + chr3_3:69905700-69905719 None:intergenic 50.0%
CCCTCCAACAGATGTAGGAT+CGG + chr3_3:69905701-69905720 None:intergenic 50.0%
CCGATCCTACATCTGTTGGA+GGG - chr3_3:69905698-69905717 Msa0468280:intron 50.0%
! GGAGGGTATGACTCCACTTT+AGG - chr3_3:69905715-69905734 Msa0468280:intron 50.0%
CACAATCATCTACACCCCCA+TGG - chr3_3:69905776-69905795 Msa0468280:intron 50.0%
CCATTCCAGTCAGAACTTCG+GGG + chr3_3:69905874-69905893 None:intergenic 50.0%
GCATGCCATTCTTATGAGGC+AGG - chr3_3:69906510-69906529 Msa0468280:intron 50.0%
AGAGGCCTGCCTCATAAGAA+TGG + chr3_3:69906518-69906537 None:intergenic 50.0%
GGGAAAATGGCAAGGAAGAG+AGG + chr3_3:69906578-69906597 None:intergenic 50.0%
TTCACGGCATATGGTGAAGG+TGG + chr3_3:69906664-69906683 None:intergenic 50.0%
GCTGGATTGTTCACGGCATA+TGG + chr3_3:69906673-69906692 None:intergenic 50.0%
TGCCGTGAACAATCCAGCTA+TGG - chr3_3:69906675-69906694 Msa0468280:intron 50.0%
TCAGGTTCACCAGGTCTTTC+TGG + chr3_3:69906751-69906770 None:intergenic 50.0%
! CCCTTGTCACTTAGGTTGCA+TGG + chr3_3:69906862-69906881 None:intergenic 50.0%
! AAGGCAGACCCTTGTCACTT+AGG + chr3_3:69906870-69906889 None:intergenic 50.0%
GGGTGGTCATACTTACAAGC+TGG + chr3_3:69907040-69907059 None:intergenic 50.0%
TAACGTCCAGGCATAGTTGG+GGG + chr3_3:69907076-69907095 None:intergenic 50.0%
ACTAGCCGAGTTTGTGTGAG+AGG + chr3_3:69907107-69907126 None:intergenic 50.0%
! AGTATTGAGGAGGCTGGAAG+TGG - chr3_3:69907124-69907143 Msa0468280:CDS 50.0%
CAAAAGGCTTGTGCCACATC+AGG + chr3_3:69907294-69907313 None:intergenic 50.0%
! GATGTGGCACAAGCCTTTTG+CGG - chr3_3:69907294-69907313 Msa0468280:intron 50.0%
ATGTTGAAGTTGAACGGCGG+TGG - chr3_3:69907796-69907815 Msa0468280:intron 50.0%
ATTGTTGCGATGGCATGGCA+GGG + chr3_3:69907856-69907875 None:intergenic 50.0%
! TGTGGATTGTTGCGATGGCA+TGG + chr3_3:69907861-69907880 None:intergenic 50.0%
TGGAGGGATTCCATCACCAA+TGG - chr3_3:69908071-69908090 Msa0468280:intron 50.0%
TGAGACGGTTCCATTGGTGA+TGG + chr3_3:69908084-69908103 None:intergenic 50.0%
TCTTCAGCTTCAGGCCTCAA+TGG + chr3_3:69904297-69904316 None:intergenic 50.0%
CCCTGTTTGGAGAAGAAACC+AGG - chr3_3:69904377-69904396 Msa0468280:three_prime_UTR 50.0%
!! GAGGTTTTTAGAGAGAGGGC+AGG - chr3_3:69908900-69908919 Msa0468280:intron 50.0%
AATGCAAATTCCCTTGCCCG+TGG - chr3_3:69904793-69904812 Msa0468280:intron 50.0%
ATGCAAATTCCCTTGCCCGT+GGG - chr3_3:69904794-69904813 Msa0468280:intron 50.0%
ATGGAAAATCCCACGGGCAA+GGG + chr3_3:69904806-69904825 None:intergenic 50.0%
! TTGCCCGTGGGATTTTCCAT+GGG - chr3_3:69904806-69904825 Msa0468280:intron 50.0%
TCTCCCATGGAAAATCCCAC+GGG + chr3_3:69904812-69904831 None:intergenic 50.0%
ACTCGGTCGAACTCAAGCAT+AGG + chr3_3:69905085-69905104 None:intergenic 50.0%
CCAAACGAATAGGTAGGCCA+AGG + chr3_3:69905479-69905498 None:intergenic 50.0%
CCTTGGCCTACCTATTCGTT+TGG - chr3_3:69905476-69905495 Msa0468280:intron 50.0%
CGCGGCTAAAATTTCAGGAC+AGG + chr3_3:69905586-69905605 None:intergenic 50.0%
TGCCCTTATTACATGCGCAC+CGG - chr3_3:69905634-69905653 Msa0468280:intron 50.0%
GAACCGGTGCGCATGTAATA+AGG + chr3_3:69905640-69905659 None:intergenic 50.0%
!! CGCACCGGTTCTTGTAAGTT+TGG - chr3_3:69909933-69909952 Msa0468280:intron 50.0%
CATCCCGATCCTACATCTGT+TGG - chr3_3:69905694-69905713 Msa0468280:intron 50.0%
CCTCCAACAGATGTAGGATC+GGG + chr3_3:69905700-69905719 None:intergenic 50.0%
CCCTCCAACAGATGTAGGAT+CGG + chr3_3:69905701-69905720 None:intergenic 50.0%
CCGATCCTACATCTGTTGGA+GGG - chr3_3:69905698-69905717 Msa0468280:intron 50.0%
! GGAGGGTATGACTCCACTTT+AGG - chr3_3:69905715-69905734 Msa0468280:intron 50.0%
CACAATCATCTACACCCCCA+TGG - chr3_3:69905776-69905795 Msa0468280:intron 50.0%
CCATTCCAGTCAGAACTTCG+GGG + chr3_3:69905874-69905893 None:intergenic 50.0%
GCATGCCATTCTTATGAGGC+AGG - chr3_3:69906510-69906529 Msa0468280:intron 50.0%
AGAGGCCTGCCTCATAAGAA+TGG + chr3_3:69906518-69906537 None:intergenic 50.0%
TTCACGGCATATGGTGAAGG+TGG + chr3_3:69906664-69906683 None:intergenic 50.0%
GCTGGATTGTTCACGGCATA+TGG + chr3_3:69906673-69906692 None:intergenic 50.0%
TGCCGTGAACAATCCAGCTA+TGG - chr3_3:69906675-69906694 Msa0468280:intron 50.0%
TCAGGTTCACCAGGTCTTTC+TGG + chr3_3:69906751-69906770 None:intergenic 50.0%
! CCCTTGTCACTTAGGTTGCA+TGG + chr3_3:69906862-69906881 None:intergenic 50.0%
! AAGGCAGACCCTTGTCACTT+AGG + chr3_3:69906870-69906889 None:intergenic 50.0%
GGGTGGTCATACTTACAAGC+TGG + chr3_3:69907040-69907059 None:intergenic 50.0%
TAACGTCCAGGCATAGTTGG+GGG + chr3_3:69907076-69907095 None:intergenic 50.0%
ACTAGCCGAGTTTGTGTGAG+AGG + chr3_3:69907107-69907126 None:intergenic 50.0%
! AGTATTGAGGAGGCTGGAAG+TGG - chr3_3:69907124-69907143 Msa0468280:CDS 50.0%
CAAAAGGCTTGTGCCACATC+AGG + chr3_3:69907294-69907313 None:intergenic 50.0%
! GATGTGGCACAAGCCTTTTG+CGG - chr3_3:69907294-69907313 Msa0468280:intron 50.0%
CGACGCACAAGCCATAGTCA+AGG + chr3_3:69904755-69904774 None:intergenic 55.0%
CATGGAAAATCCCACGGGCA+AGG + chr3_3:69904807-69904826 None:intergenic 55.0%
! CTTGCCCGTGGGATTTTCCA+TGG - chr3_3:69904805-69904824 Msa0468280:intron 55.0%
CCCGATCCTACATCTGTTGG+AGG - chr3_3:69905697-69905716 Msa0468280:intron 55.0%
! CTTCTCCCCGAAGTTCTGAC+TGG - chr3_3:69905866-69905885 Msa0468280:intron 55.0%
! CCCCGAAGTTCTGACTGGAA+TGG - chr3_3:69905871-69905890 Msa0468280:intron 55.0%
!! ACAACTGTGGACTAGGCCAC+AGG + chr3_3:69906018-69906037 None:intergenic 55.0%
! TGCCCTTAGGGTAGTGGTGA+AGG - chr3_3:69906283-69906302 Msa0468280:CDS 55.0%
TTGGGGGCGGTAGGTTTATC+GGG + chr3_3:69907060-69907079 None:intergenic 55.0%
GTTGGGGGCGGTAGGTTTAT+CGG + chr3_3:69907061-69907080 None:intergenic 55.0%
! TCGGCTAGTATTGAGGAGGC+TGG - chr3_3:69907118-69907137 Msa0468280:CDS 55.0%
ATTGAGGAGGCTGGAAGTGG+AGG - chr3_3:69907127-69907146 Msa0468280:CDS 55.0%
GATTGTTGCGATGGCATGGC+AGG + chr3_3:69907857-69907876 None:intergenic 55.0%
CGACGCACAAGCCATAGTCA+AGG + chr3_3:69904755-69904774 None:intergenic 55.0%
CATGGAAAATCCCACGGGCA+AGG + chr3_3:69904807-69904826 None:intergenic 55.0%
! CTTGCCCGTGGGATTTTCCA+TGG - chr3_3:69904805-69904824 Msa0468280:intron 55.0%
CCCGATCCTACATCTGTTGG+AGG - chr3_3:69905697-69905716 Msa0468280:intron 55.0%
! CTTCTCCCCGAAGTTCTGAC+TGG - chr3_3:69905866-69905885 Msa0468280:intron 55.0%
! CCCCGAAGTTCTGACTGGAA+TGG - chr3_3:69905871-69905890 Msa0468280:intron 55.0%
!! ACAACTGTGGACTAGGCCAC+AGG + chr3_3:69906018-69906037 None:intergenic 55.0%
! TGCCCTTAGGGTAGTGGTGA+AGG - chr3_3:69906283-69906302 Msa0468280:CDS 55.0%
TTGGGGGCGGTAGGTTTATC+GGG + chr3_3:69907060-69907079 None:intergenic 55.0%
GTTGGGGGCGGTAGGTTTAT+CGG + chr3_3:69907061-69907080 None:intergenic 55.0%
! TCGGCTAGTATTGAGGAGGC+TGG - chr3_3:69907118-69907137 Msa0468280:CDS 55.0%
ATTGAGGAGGCTGGAAGTGG+AGG - chr3_3:69907127-69907146 Msa0468280:CDS 55.0%
GAACTTCGGGGAGAAGCCCC+TGG + chr3_3:69905862-69905881 None:intergenic 65.0%
GGGGCGGTAGGTTTATCGGG+TGG + chr3_3:69907057-69907076 None:intergenic 65.0%
CAGGCATAGTTGGGGGCGGT+AGG + chr3_3:69907069-69907088 None:intergenic 65.0%
CTACCGCCCCCAACTATGCC+TGG - chr3_3:69907067-69907086 Msa0468280:intron 65.0%
CGTCCAGGCATAGTTGGGGG+CGG + chr3_3:69907073-69907092 None:intergenic 65.0%
GAACTTCGGGGAGAAGCCCC+TGG + chr3_3:69905862-69905881 None:intergenic 65.0%
GGGGCGGTAGGTTTATCGGG+TGG + chr3_3:69907057-69907076 None:intergenic 65.0%
CAGGCATAGTTGGGGGCGGT+AGG + chr3_3:69907069-69907088 None:intergenic 65.0%
CTACCGCCCCCAACTATGCC+TGG - chr3_3:69907067-69907086 Msa0468280:intron 65.0%
CGTCCAGGCATAGTTGGGGG+CGG + chr3_3:69907073-69907092 None:intergenic 65.0%
CGGGGAGAAGCCCCTGGAGT+CGG + chr3_3:69905856-69905875 None:intergenic 70.0%
CGGGGAGAAGCCCCTGGAGT+CGG + chr3_3:69905856-69905875 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 69904165 69911890 69904165 ID=Msa0468280;Name=Msa0468280
chr3_3 mRNA 69904165 69911890 69904165 ID=Msa0468280-mRNA-1;Parent=Msa0468280;Name=Msa0468280-mRNA-1;_AED=0.20;_eAED=0.20;_QI=0|0.46|0.35|1|0.53|0.35|14|438|730
chr3_3 exon 69904165 69904788 69904165 ID=Msa0468280-mRNA-1:exon:16770;Parent=Msa0468280-mRNA-1
chr3_3 exon 69904877 69905125 69904877 ID=Msa0468280-mRNA-1:exon:16769;Parent=Msa0468280-mRNA-1
chr3_3 exon 69905874 69906004 69905874 ID=Msa0468280-mRNA-1:exon:16768;Parent=Msa0468280-mRNA-1
chr3_3 exon 69906032 69906149 69906032 ID=Msa0468280-mRNA-1:exon:16767;Parent=Msa0468280-mRNA-1
chr3_3 exon 69906274 69906393 69906274 ID=Msa0468280-mRNA-1:exon:16766;Parent=Msa0468280-mRNA-1
chr3_3 exon 69907087 69907152 69907087 ID=Msa0468280-mRNA-1:exon:16765;Parent=Msa0468280-mRNA-1
chr3_3 exon 69907372 69907605 69907372 ID=Msa0468280-mRNA-1:exon:16764;Parent=Msa0468280-mRNA-1
chr3_3 exon 69907618 69907790 69907618 ID=Msa0468280-mRNA-1:exon:16763;Parent=Msa0468280-mRNA-1
chr3_3 exon 69909184 69909427 69909184 ID=Msa0468280-mRNA-1:exon:16762;Parent=Msa0468280-mRNA-1
chr3_3 exon 69910155 69910285 69910155 ID=Msa0468280-mRNA-1:exon:16761;Parent=Msa0468280-mRNA-1
chr3_3 exon 69910313 69910433 69910313 ID=Msa0468280-mRNA-1:exon:16760;Parent=Msa0468280-mRNA-1
chr3_3 exon 69910558 69910677 69910558 ID=Msa0468280-mRNA-1:exon:16759;Parent=Msa0468280-mRNA-1
chr3_3 exon 69911371 69911436 69911371 ID=Msa0468280-mRNA-1:exon:16758;Parent=Msa0468280-mRNA-1
chr3_3 exon 69911657 69911890 69911657 ID=Msa0468280-mRNA-1:exon:16757;Parent=Msa0468280-mRNA-1
chr3_3 CDS 69911657 69911890 69911657 ID=Msa0468280-mRNA-1:cds;Parent=Msa0468280-mRNA-1
chr3_3 CDS 69911371 69911436 69911371 ID=Msa0468280-mRNA-1:cds;Parent=Msa0468280-mRNA-1
chr3_3 CDS 69910558 69910677 69910558 ID=Msa0468280-mRNA-1:cds;Parent=Msa0468280-mRNA-1
chr3_3 CDS 69910313 69910433 69910313 ID=Msa0468280-mRNA-1:cds;Parent=Msa0468280-mRNA-1
chr3_3 CDS 69910155 69910285 69910155 ID=Msa0468280-mRNA-1:cds;Parent=Msa0468280-mRNA-1
chr3_3 CDS 69909184 69909427 69909184 ID=Msa0468280-mRNA-1:cds;Parent=Msa0468280-mRNA-1
chr3_3 CDS 69907618 69907790 69907618 ID=Msa0468280-mRNA-1:cds;Parent=Msa0468280-mRNA-1
chr3_3 CDS 69907372 69907605 69907372 ID=Msa0468280-mRNA-1:cds;Parent=Msa0468280-mRNA-1
chr3_3 CDS 69907087 69907152 69907087 ID=Msa0468280-mRNA-1:cds;Parent=Msa0468280-mRNA-1
chr3_3 CDS 69906274 69906393 69906274 ID=Msa0468280-mRNA-1:cds;Parent=Msa0468280-mRNA-1
chr3_3 CDS 69906032 69906149 69906032 ID=Msa0468280-mRNA-1:cds;Parent=Msa0468280-mRNA-1
chr3_3 CDS 69905874 69906004 69905874 ID=Msa0468280-mRNA-1:cds;Parent=Msa0468280-mRNA-1
chr3_3 CDS 69904877 69905125 69904877 ID=Msa0468280-mRNA-1:cds;Parent=Msa0468280-mRNA-1
chr3_3 CDS 69904603 69904788 69904603 ID=Msa0468280-mRNA-1:cds;Parent=Msa0468280-mRNA-1
chr3_3 three_prime_UTR 69904165 69904602 69904165 ID=Msa0468280-mRNA-1:three_prime_utr;Parent=Msa0468280-mRNA-1
Gene Sequence

>Msa0468280

ATGACAAGGGTTTCATCAGTTCATGATGATGATGGTTGGAGTGATGATTATGTGGTGAGTGATTGGATTGAGAATGAGGTGGTGAGTGGATATGTTGATGAAAGAAGCAATGGTGGAGCTGAACAGTATCCATTGAGGCCTGAAGCTGAAGACTGTTCTTTTTATCTTAAGACTGGAACTTGCAAATTTGGATTCAATTGCAAGTTTAATCACCCTGTTTGGAGAAGAAACCAGGTTTTTAGAGAGAGGGCAGGAGAAAGAGATGAATTGGAGGAAAGATCAAGCCAGATAGAATGCAAGTATTATTCAAGATCTGGGGGTTGTAAGTTTGGAAAGGATTGTAAATTTGATCACACCAGAGGAAAGTTTTCAGCAGATCAAGTTTTACAGCTTAACTTCCTTGGCCTACCTATTCGTTTGGGTGAGAAAGAATGCCCTTATTACATGCGCACCGGTTCTTCTTGTAAGTTTGGAGCAAACTGCAAGTTTAATCATCCCGATCCTACATCTGTTGGAGGGTATGACTCCACTTTAGGATATGACGTGTCACAATCATCTACACCCCCATGGTCTTCTACCAGAAAATTCAATGAAACTGCTCCTTTTGCGCCAATCATAATTTCACCGACTCCAGGGGCTTCTCCCCGAAGTTCTGACTGGAATGGATATCAGGCACCTTTCTATTTTTCTGAGAGGAGTATGCATCCACCTTCACCATATGCCGTGAACAATCCAGCTATGGAAACGAATGCTTATATACACCGTCATAAGCATACACCAGTTGAAGAGTTTCCAGAAAGACCTGGTGAACCTGAATGCAGTTTCTTCTTAAAAACCGGGGATTGCAAATTTAAATCCCATTGCAAATTTCATCATCCAAAGAACCGGATTACAAAATTACCTCCATGCAACCTAAGTTCAAACTTTGAAGTTGGTGATGAAGCTGCTGTTCTAGAATTTGATAAGGGACAAGAGTGTCATGACGATGATGAGAATGTGAATGAGAAGGTGAGTACTGATGTTGATGAAGTGAGTGGAATTGATGATAAAGGTTCAAACTTTGAAGATGATGATGAAAAATCTGCCACAGGACAAGGGTTTCATCAAGTTCATGATGATGATGGTTGGAGTGGTGATTATGTGGTGAGTGATTGGATTGAGAATGAGGTGGTGAGTGGATATGTTGATGAAAGAAGCAATGGTGGAGCTGAACAGTATCCATTGAGGCCTGAAGCTGAAGACTGTTCTTTTTATCTTAAGACTGGAACTTGCAAATTTGGATTCAATTGCAAGTTTAATCACCCTGTTTGGAGAAGAAACCAGGTTTTTAGAGAGAGGGCAGGAGAAAGAGATGAATTGGAGGAAAGATCAAGCCAGATAGAATGCAAGTATTATTCAAGATCTGGGGGTTGTAAGTTTGGAAAGGATTGTAAATTTGATCACACCAGAGGAAAGTTTTCAGCAGATCAAGTTTTACAGCTTAACTTCCTTGGCCTACCTATTCGTTTGGGTGAGAAAGAATGCCCTTATTACATGCGCACCGGTTCTTGTAAGTTTGGAGCAAACTGCAAGTTTAATCATCCCGATCCTACATCTGTTGGAGGGTATGACTCCACTTTAGGATATGACGTGTCACAATCATCTACACCCCCATGGTCTTCTACCAGAAAATTCAATGAAACTGCTCCTTTTGCGCCAATCATAATTTCACCGACTCCAGGGGCTTCTCCCCGAAGTTCTGACTGGAATGGATATCAGAGGAGTATGCATCCACCTTCACCATATGCCGTGAACAATCCAGCTATGGAAACGAATGCTTATATACACCGTCATAAGCATACACCAGTTGAAGAGTTTCCAGAAAGACCTGGTGAACCTGAATGCAGTTTCTTCTTAAAAACCGGGGATTGCAAATTTAAATCCCATTGCAAATTTCATCATCCAAAGAACCGGATTACAAAATTACCTCCATGCAACCTAAGTGACAAGGGTCTGCCTTTGAGACCTGGCCAGAATGTGTGCACTCATTACAACCGATATGGAATTTGCAAATTTGGACCAGCTTGTAAGTATGACCACCCGATAAACCTACCGCCCCCAACTATGCCTGGACGTTATCAACAATCCTCTCACACAAACTCGGCTAGTATTGAGGAGGCTGGAAGTGGAGGAGCTAGTGATGCAACAATTTAA
Protein sequence

>Msa0468280

MTRVSSVHDDDGWSDDYVVSDWIENEVVSGYVDERSNGGAEQYPLRPEAEDCSFYLKTGTCKFGFNCKFNHPVWRRNQVFRERAGERDELEERSSQIECKYYSRSGGCKFGKDCKFDHTRGKFSADQVLQLNFLGLPIRLGEKECPYYMRTGSSCKFGANCKFNHPDPTSVGGYDSTLGYDVSQSSTPPWSSTRKFNETAPFAPIIISPTPGASPRSSDWNGYQAPFYFSERSMHPPSPYAVNNPAMETNAYIHRHKHTPVEEFPERPGEPECSFFLKTGDCKFKSHCKFHHPKNRITKLPPCNLSSNFEVGDEAAVLEFDKGQECHDDDENVNEKVSTDVDEVSGIDDKGSNFEDDDEKSATGQGFHQVHDDDGWSGDYVVSDWIENEVVSGYVDERSNGGAEQYPLRPEAEDCSFYLKTGTCKFGFNCKFNHPVWRRNQVFRERAGERDELEERSSQIECKYYSRSGGCKFGKDCKFDHTRGKFSADQVLQLNFLGLPIRLGEKECPYYMRTGSCKFGANCKFNHPDPTSVGGYDSTLGYDVSQSSTPPWSSTRKFNETAPFAPIIISPTPGASPRSSDWNGYQRSMHPPSPYAVNNPAMETNAYIHRHKHTPVEEFPERPGEPECSFFLKTGDCKFKSHCKFHHPKNRITKLPPCNLSDKGLPLRPGQNVCTHYNRYGICKFGPACKYDHPINLPPPTMPGRYQQSSHTNSASIEEAGSGGASDATI*