Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0472010 | XP_039687614.1 | 91.592 | 559 | 27 | 7 | 1 | 559 | 1 | 539 | 0.0 | 930 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0472010 | sp|Q6AWY6|GRF3_ORYSJ | 57.944 | 107 | 30 | 2 | 127 | 219 | 52 | 157 | 1.83e-33 | 135 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0472010 | G7J891 | 91.234 | 559 | 28 | 8 | 1 | 559 | 1 | 538 | 0.0 | 922 |
Gene ID | Type | Classification |
---|---|---|
Msa0472010 | TF | GRF |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0425540 | Msa0472010 | 0.850541 | 1.589008e-60 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0472010 | MtrunA17_Chr3g0127641 | 91.055 | 559 | 28 | 9 | 1 | 559 | 1 | 537 | 0.0 | 916 |
Msa0472010 | MtrunA17_Chr4g0021261 | 53.153 | 111 | 36 | 1 | 128 | 222 | 25 | 135 | 1.10e-33 | 131 |
Msa0472010 | MtrunA17_Chr1g0152191 | 49.296 | 142 | 45 | 3 | 103 | 219 | 117 | 256 | 4.45e-33 | 134 |
Msa0472010 | MtrunA17_Chr8g0343881 | 49.541 | 109 | 38 | 1 | 129 | 220 | 12 | 120 | 6.96e-31 | 124 |
Msa0472010 | MtrunA17_Chr5g0409471 | 56.000 | 100 | 37 | 2 | 126 | 219 | 14 | 112 | 1.99e-30 | 122 |
Msa0472010 | MtrunA17_Chr4g0070591 | 47.458 | 118 | 45 | 2 | 128 | 228 | 9 | 126 | 1.03e-29 | 120 |
Msa0472010 | MtrunA17_Chr2g0300511 | 48.246 | 114 | 38 | 2 | 128 | 220 | 7 | 120 | 2.36e-29 | 119 |
Msa0472010 | MtrunA17_Chr7g0265931 | 43.704 | 135 | 58 | 2 | 109 | 226 | 60 | 193 | 1.54e-28 | 117 |
Msa0472010 | MtrunA17_Chr8g0351521 | 47.458 | 118 | 52 | 3 | 127 | 234 | 53 | 170 | 1.09e-22 | 101 |
Msa0472010 | MtrunA17_Chr8g0351521 | 61.111 | 54 | 20 | 1 | 161 | 213 | 287 | 340 | 6.47e-13 | 71.2 |
Msa0472010 | MtrunA17_Chr8g0351291 | 56.364 | 55 | 23 | 1 | 160 | 213 | 35 | 89 | 4.67e-12 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0472010 | AT4G37740.1 | 55.263 | 114 | 34 | 2 | 128 | 225 | 164 | 276 | 4.26e-34 | 137 |
Msa0472010 | AT5G53660.1 | 56.522 | 115 | 45 | 3 | 126 | 236 | 57 | 170 | 4.38e-32 | 128 |
Msa0472010 | AT2G22840.1 | 55.172 | 116 | 35 | 2 | 128 | 227 | 133 | 247 | 4.12e-31 | 128 |
Msa0472010 | AT3G13960.1 | 49.558 | 113 | 40 | 1 | 124 | 219 | 12 | 124 | 8.38e-31 | 125 |
Msa0472010 | AT4G24150.3 | 42.331 | 163 | 64 | 5 | 102 | 243 | 90 | 243 | 9.40e-30 | 122 |
Msa0472010 | AT4G24150.2 | 42.331 | 163 | 64 | 5 | 102 | 243 | 128 | 281 | 1.65e-29 | 122 |
Msa0472010 | AT2G36400.1 | 51.695 | 118 | 35 | 2 | 129 | 225 | 77 | 193 | 1.12e-28 | 119 |
Msa0472010 | AT3G52910.1 | 47.321 | 112 | 38 | 1 | 129 | 219 | 83 | 194 | 1.54e-26 | 112 |
Msa0472010 | AT4G24150.1 | 36.702 | 188 | 64 | 5 | 102 | 243 | 128 | 306 | 3.18e-26 | 113 |
Msa0472010 | AT2G06200.2 | 45.763 | 118 | 36 | 3 | 128 | 217 | 45 | 162 | 2.19e-25 | 106 |
Msa0472010 | AT2G06200.1 | 45.763 | 118 | 36 | 3 | 128 | 217 | 6 | 123 | 3.10e-25 | 105 |
Msa0472010 | AT2G45480.2 | 44.444 | 108 | 43 | 2 | 126 | 216 | 22 | 129 | 3.56e-19 | 89.4 |
Msa0472010 | AT2G45480.1 | 44.444 | 108 | 43 | 2 | 126 | 216 | 20 | 127 | 2.69e-18 | 88.2 |
Msa0472010 | AT2G45480.1 | 58.182 | 55 | 21 | 2 | 174 | 228 | 303 | 355 | 1.36e-12 | 70.5 |
Msa0472010 | AT2G45480.3 | 44.444 | 108 | 43 | 2 | 126 | 216 | 22 | 129 | 2.80e-18 | 88.2 |
Msa0472010 | AT2G45480.3 | 58.182 | 55 | 21 | 2 | 174 | 228 | 305 | 357 | 1.34e-12 | 70.5 |
Msa0472010 | AT2G06200.3 | 72.727 | 44 | 10 | 1 | 176 | 217 | 8 | 51 | 5.99e-16 | 76.6 |
Find 136 sgRNAs with CRISPR-Local
Find 524 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAAACACAAACTAACCTTTA+AGG | 0.146408 | 3_3:-74415092 | None:intergenic |
GTGAAAAGGTTGAAAATTTA+AGG | 0.152843 | 3_3:-74415046 | None:intergenic |
GCTTCCAACACAACCCTTAA+AGG | 0.155280 | 3_3:+74415078 | Msa0472010:CDS |
TCCCTTGGTGCTTCTAATTC+AGG | 0.206328 | 3_3:+74416436 | Msa0472010:CDS |
CTTTCACAGTACTTGTTATT+AGG | 0.229946 | 3_3:-74415722 | None:intergenic |
GTCGAATCCATTGGCACTTC+AGG | 0.255897 | 3_3:+74417012 | Msa0472010:CDS |
ACAACATACAACATGTCTTT+TGG | 0.266442 | 3_3:+74414970 | Msa0472010:CDS |
AATCCAACTACAAGAAAATA+TGG | 0.279540 | 3_3:+74415899 | Msa0472010:CDS |
TTAGAAGCACCAAGGGAAAT+TGG | 0.300986 | 3_3:-74416430 | None:intergenic |
AACCTCTTGGTTTCTCAGAT+TGG | 0.311180 | 3_3:-74416636 | None:intergenic |
CTCTATATACAAACTGTCTA+AGG | 0.318672 | 3_3:+74423759 | Msa0472010:CDS |
GCCCTTGATGATGCAACATT+TGG | 0.323926 | 3_3:-74417117 | None:intergenic |
TATGATTTACAAGTACTTGA+TGG | 0.325776 | 3_3:+74415304 | Msa0472010:CDS |
TCAATCTGAGGCTATCAAAT+AGG | 0.341073 | 3_3:+74415624 | Msa0472010:CDS |
GTGGAAATGAATTCAGATAC+TGG | 0.360987 | 3_3:-74416531 | None:intergenic |
AAACACAAACTAACCTTTAA+GGG | 0.361293 | 3_3:-74415091 | None:intergenic |
ACTACTAGTGTTATTGTTGT+TGG | 0.363306 | 3_3:-74414800 | None:intergenic |
TTCCACAGGCTTTCTTGAAC+GGG | 0.370446 | 3_3:-74415765 | None:intergenic |
GTCCACTAGCTGAAGTTCTA+AGG | 0.379508 | 3_3:+74416917 | Msa0472010:CDS |
ATGATTAAACTTATTGAGTA+AGG | 0.386331 | 3_3:-74417154 | None:intergenic |
GCTAATGCTATCATTGATAA+TGG | 0.393717 | 3_3:+74415015 | Msa0472010:CDS |
ATGGCGGCTTCAGTAGGAAT+AGG | 0.401179 | 3_3:+74415233 | Msa0472010:CDS |
GCTGTTGATGCTGATGGTTA+TGG | 0.403679 | 3_3:+74414943 | Msa0472010:CDS |
TTCATCACTTGATCTATCAA+TGG | 0.407184 | 3_3:+74416765 | Msa0472010:CDS |
GGATTCAGTGTTATTATGAT+AGG | 0.409147 | 3_3:-74416509 | None:intergenic |
ATAGTCATCATCAAATCAAA+AGG | 0.419333 | 3_3:+74415816 | Msa0472010:CDS |
TTTGCATAATAGCAGCTTTG+AGG | 0.429903 | 3_3:+74415982 | Msa0472010:CDS |
CTTCTGCACCTACCAGCCTC+TGG | 0.433695 | 3_3:-74415659 | None:intergenic |
ACCATTGTTGGAGGTGGTGG+TGG | 0.435162 | 3_3:-74416716 | None:intergenic |
GAAAATGAAGATTGGAGATA+AGG | 0.436913 | 3_3:-74415959 | None:intergenic |
CTCCTTTCACAATTGCTCAA+TGG | 0.446940 | 3_3:+74415261 | Msa0472010:CDS |
GGATTAAGTAAGAGAGGAAA+GGG | 0.448727 | 3_3:-74416589 | None:intergenic |
TCTGCTGCTGTTGATGCTGA+TGG | 0.451525 | 3_3:+74414937 | Msa0472010:CDS |
ATTGTTGGAGGTGGTGGTGG+TGG | 0.456677 | 3_3:-74416713 | None:intergenic |
TATGCAAAGAAAATGAAGAT+TGG | 0.460286 | 3_3:-74415967 | None:intergenic |
GGCTCAATCCAGCACAACCT+TGG | 0.462541 | 3_3:+74416875 | Msa0472010:CDS |
AACTGATGCAGAACCATTGT+TGG | 0.462885 | 3_3:-74416728 | None:intergenic |
GAAAGAAGATGAGAAGGAAC+AGG | 0.467897 | 3_3:-74415335 | None:intergenic |
TCATCACTTGATCTATCAAT+GGG | 0.468999 | 3_3:+74416766 | Msa0472010:CDS |
CTGATGCATAACAACAAACT+TGG | 0.470877 | 3_3:+74416469 | Msa0472010:CDS |
TGGTGTGTCAAAGGACCATT+TGG | 0.471965 | 3_3:-74423890 | None:intergenic |
TCCATTGGCACTTCAGGGAC+AGG | 0.476778 | 3_3:+74417018 | Msa0472010:CDS |
AAGATTGGAGATAAGGATGA+AGG | 0.477847 | 3_3:-74415952 | None:intergenic |
CTAAAATAGCATTCTCAAGT+TGG | 0.478113 | 3_3:+74416854 | Msa0472010:CDS |
AATAACACTAGTAGTGTTGT+TGG | 0.478175 | 3_3:+74414808 | Msa0472010:CDS |
CTAACCTTTAAGGGTTGTGT+TGG | 0.481457 | 3_3:-74415082 | None:intergenic |
GGAACAGCCACAGTAAAATC+AGG | 0.486638 | 3_3:-74415872 | None:intergenic |
GCTCAATCCAGCACAACCTT+GGG | 0.488726 | 3_3:+74416876 | Msa0472010:CDS |
AGTTCAGAACTGTTATATAG+TGG | 0.490372 | 3_3:-74416550 | None:intergenic |
TGATAGATCAAGTGATGAAA+GGG | 0.490826 | 3_3:-74416761 | None:intergenic |
TCAATGAAACTAAAACCTCT+TGG | 0.493104 | 3_3:-74416649 | None:intergenic |
GAGATAAGGATGAAGGGGAG+TGG | 0.496353 | 3_3:-74415945 | None:intergenic |
GTCCAAATGTTGCATCATCA+AGG | 0.496502 | 3_3:+74417115 | Msa0472010:CDS |
GCTGTCCTTCATACTCCAAA+TGG | 0.496729 | 3_3:+74423875 | Msa0472010:CDS |
AGATTGGAGATAAGGATGAA+GGG | 0.498515 | 3_3:-74415951 | None:intergenic |
TTATTTGTGTGAAGTTCCAC+AGG | 0.498667 | 3_3:-74415779 | None:intergenic |
TCGAATCCATTGGCACTTCA+GGG | 0.500942 | 3_3:+74417013 | Msa0472010:CDS |
AGAACCATTGTTGGAGGTGG+TGG | 0.506509 | 3_3:-74416719 | None:intergenic |
GTTCCACAGGCTTTCTTGAA+CGG | 0.508728 | 3_3:-74415766 | None:intergenic |
TTTCTTGTAGTTGGATTAGG+AGG | 0.509981 | 3_3:-74415893 | None:intergenic |
GGCTTGGAGTGGATGCTGAA+TGG | 0.510711 | 3_3:+74416403 | Msa0472010:CDS |
CTGATGGAAGTAACATTGCT+TGG | 0.510713 | 3_3:-74416940 | None:intergenic |
TGGCGGCTTCAGTAGGAATA+GGG | 0.511161 | 3_3:+74415234 | Msa0472010:CDS |
GATTGGAGATAAGGATGAAG+GGG | 0.516351 | 3_3:-74415950 | None:intergenic |
GAACCTACCCAAGGTTGTGC+TGG | 0.517275 | 3_3:-74416883 | None:intergenic |
TCCTGTCCCTGAAGTGCCAA+TGG | 0.523915 | 3_3:-74417019 | None:intergenic |
TCAGATTGGAGAGTTTGCAT+TGG | 0.524106 | 3_3:-74416622 | None:intergenic |
GAATTGAATGAAAAGGGGCT+TGG | 0.524945 | 3_3:+74416387 | Msa0472010:intron |
CACTAGTAGTGTTGTTGGGT+CGG | 0.525074 | 3_3:+74414813 | Msa0472010:CDS |
GAAGCAGAAATGTTGTGAAA+AGG | 0.532749 | 3_3:-74415060 | None:intergenic |
GGGATTAAGTAAGAGAGGAA+AGG | 0.533228 | 3_3:-74416590 | None:intergenic |
GGCCTTAGAACTTCAGCTAG+TGG | 0.534033 | 3_3:-74416919 | None:intergenic |
TTGATAGATCAAGTGATGAA+AGG | 0.535432 | 3_3:-74416762 | None:intergenic |
AGAATTTGTTGCATCACTGA+TGG | 0.536310 | 3_3:-74416956 | None:intergenic |
AATGGAGATCCAATTTCCCT+TGG | 0.538520 | 3_3:+74416421 | Msa0472010:CDS |
TCAAAGGCTTTATGTATCAA+AGG | 0.539763 | 3_3:+74423853 | Msa0472010:CDS |
CTCCATTGAGCAATTGTGAA+AGG | 0.540021 | 3_3:-74415263 | None:intergenic |
GGAATGGTATCATCTCCATC+TGG | 0.544391 | 3_3:+74417039 | Msa0472010:CDS |
ATTATGATAGGAACTTCCAT+TGG | 0.546307 | 3_3:-74416497 | None:intergenic |
ACCACCACCACCTCCAACAA+TGG | 0.549376 | 3_3:+74416715 | Msa0472010:CDS |
CTACGTACCTGGTGTGTCAA+AGG | 0.550864 | 3_3:-74423899 | None:intergenic |
TATGTATGTACCTACGTACC+TGG | 0.553627 | 3_3:-74423910 | None:intergenic |
ATACATGAAAGAAGATGAGA+AGG | 0.554354 | 3_3:-74415341 | None:intergenic |
GGTGGTCACAGCAGGTGGAA+TGG | 0.556637 | 3_3:+74415214 | Msa0472010:intron |
AACAATGGTTCTGCATCAGT+TGG | 0.557664 | 3_3:+74416730 | Msa0472010:CDS |
TTATTATGCAAAACACCAGA+TGG | 0.559997 | 3_3:-74417054 | None:intergenic |
AAAGACATGTTGTATGTTGT+GGG | 0.561732 | 3_3:-74414967 | None:intergenic |
AAAAGACATGTTGTATGTTG+TGG | 0.562174 | 3_3:-74414968 | None:intergenic |
AACAATACTGATCCAGAGGC+TGG | 0.566845 | 3_3:+74415647 | Msa0472010:CDS |
GGTGGAATGGCGGCTTCAGT+AGG | 0.567231 | 3_3:+74415227 | Msa0472010:CDS |
TGAGTTTCGCGTTCAAGACA+AGG | 0.567509 | 3_3:+74414762 | Msa0472010:CDS |
TGTGAGCGGTTCTGTATCAA+AGG | 0.568478 | 3_3:+74423837 | Msa0472010:CDS |
AGTTTGTTGTTATGCATCAG+AGG | 0.569252 | 3_3:-74416466 | None:intergenic |
AAGGACCATTTGGAGTATGA+AGG | 0.571523 | 3_3:-74423880 | None:intergenic |
ACAAATCGTGTCGAATCCAT+TGG | 0.573702 | 3_3:+74417003 | Msa0472010:CDS |
ATAACACTAGTAGTGTTGTT+GGG | 0.575929 | 3_3:+74414809 | Msa0472010:CDS |
AACAAACTTGGAATGACCAA+TGG | 0.577256 | 3_3:+74416481 | Msa0472010:CDS |
TAGTCATCATCAAATCAAAA+GGG | 0.580379 | 3_3:+74415817 | Msa0472010:CDS |
CATGATTATCAAAGAATGAA+CGG | 0.581245 | 3_3:-74414900 | None:intergenic |
TGCAGAACCATTGTTGGAGG+TGG | 0.586637 | 3_3:-74416722 | None:intergenic |
TCCTGAATTAGAAGCACCAA+GGG | 0.587527 | 3_3:-74416437 | None:intergenic |
GTTTGCATAATTTCTGTGAG+CGG | 0.590028 | 3_3:+74423799 | Msa0472010:CDS |
GAGTTTGCATTGGAACAACA+AGG | 0.591725 | 3_3:-74416612 | None:intergenic |
ATACTGATCCAGAGGCTGGT+AGG | 0.593096 | 3_3:+74415651 | Msa0472010:CDS |
TTGGTGCTTCTAATTCAGGA+TGG | 0.601100 | 3_3:+74416440 | Msa0472010:CDS |
TGGAAATGAATTCAGATACT+GGG | 0.603286 | 3_3:-74416530 | None:intergenic |
ACAAGGGGATTAAGTAAGAG+AGG | 0.605379 | 3_3:-74416595 | None:intergenic |
GTTTGCATTGGAACAACAAG+GGG | 0.608134 | 3_3:-74416610 | None:intergenic |
AAATGGTCCTTTGACACACC+AGG | 0.612279 | 3_3:+74423892 | Msa0472010:CDS |
CCTTGGGTAGGTTCAACACC+TGG | 0.615728 | 3_3:+74416892 | Msa0472010:CDS |
TGGATGGTGGTTTCAATCTG+AGG | 0.616315 | 3_3:+74415612 | Msa0472010:CDS |
TCCCCGTTCAAGAAAGCCTG+TGG | 0.619148 | 3_3:+74415763 | Msa0472010:CDS |
GGTAGGTGCAGAAGAACAGA+TGG | 0.619651 | 3_3:+74415668 | Msa0472010:CDS |
GGTCACAGCAGGTGGAATGG+CGG | 0.620189 | 3_3:+74415217 | Msa0472010:intron |
TCCAAATGTTGCATCATCAA+GGG | 0.620644 | 3_3:+74417116 | Msa0472010:CDS |
TCTGTATCAAATTCTGTGAG+CGG | 0.622185 | 3_3:+74423823 | Msa0472010:CDS |
CTCCAATCTGAGAAACCAAG+AGG | 0.625201 | 3_3:+74416634 | Msa0472010:CDS |
GAATGAAAAGGGGCTTGGAG+TGG | 0.630089 | 3_3:+74416392 | Msa0472010:intron |
TGGCACTTCAGGGACAGGAA+TGG | 0.631431 | 3_3:+74417023 | Msa0472010:CDS |
ACTTCAGCTAGTGGACCACC+AGG | 0.635831 | 3_3:-74416910 | None:intergenic |
TCCACAGGCTTTCTTGAACG+GGG | 0.635923 | 3_3:-74415764 | None:intergenic |
AGGCTTCAAATAAGCAACCA+AGG | 0.637520 | 3_3:+74416002 | Msa0472010:CDS |
TAGGAACAATACTGATCCAG+AGG | 0.641405 | 3_3:+74415643 | Msa0472010:CDS |
TGATGCAGAACCATTGTTGG+AGG | 0.644016 | 3_3:-74416725 | None:intergenic |
CATTGAGCAATTGTGAAAGG+AGG | 0.644246 | 3_3:-74415260 | None:intergenic |
AATCCAGCACAACCTTGGGT+AGG | 0.661395 | 3_3:+74416880 | Msa0472010:CDS |
AGTTTGCATTGGAACAACAA+GGG | 0.661506 | 3_3:-74416611 | None:intergenic |
CCAGGTGTTGAACCTACCCA+AGG | 0.666817 | 3_3:-74416892 | None:intergenic |
ATCCTGAATTAGAAGCACCA+AGG | 0.673204 | 3_3:-74416438 | None:intergenic |
TCACTTGATCTATCAATGGG+AGG | 0.680795 | 3_3:+74416769 | Msa0472010:CDS |
TTGGTCTAATGCAGAGACAG+TGG | 0.682367 | 3_3:+74416675 | Msa0472010:CDS |
TGGGTAGGTTCAACACCTGG+TGG | 0.687244 | 3_3:+74416895 | Msa0472010:CDS |
CTTTGACACACCAGGTACGT+AGG | 0.692625 | 3_3:+74423900 | Msa0472010:CDS |
TGTGAAAGACATATGCATAG+AGG | 0.723539 | 3_3:+74415737 | Msa0472010:CDS |
GATTATCAAAGAATGAACGG+TGG | 0.727234 | 3_3:-74414897 | None:intergenic |
AATGCTATCATTGATAATGG+CGG | 0.749635 | 3_3:+74415018 | Msa0472010:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATTTCTCAATTAAAAATAT+GGG | - | chr3_3:74419730-74419749 | None:intergenic | 10.0% |
!! | ATATTTCTCAATTAAAAATA+TGG | - | chr3_3:74419731-74419750 | None:intergenic | 10.0% |
!! | TCATTAAATTATGAATTATA+TGG | + | chr3_3:74420753-74420772 | Msa0472010:intron | 10.0% |
!! | AGATATCATAAAATATTATA+TGG | + | chr3_3:74421454-74421473 | Msa0472010:intron | 10.0% |
!! | AAATATTATATGGTATATTA+TGG | + | chr3_3:74421464-74421483 | Msa0472010:intron | 10.0% |
!!! | GTATTAATATTTTAATACAA+TGG | - | chr3_3:74421495-74421514 | None:intergenic | 10.0% |
!! | ATTAATTATAATCTTTGATT+TGG | + | chr3_3:74422879-74422898 | Msa0472010:intron | 10.0% |
!! | CTAGAAATTAATTAAATATA+TGG | + | chr3_3:74423702-74423721 | Msa0472010:intron | 10.0% |
!! | ATATATAGAAAAATAAGTAG+TGG | + | chr3_3:74415132-74415151 | Msa0472010:intron | 15.0% |
!! | TGAAAATATGAAATTGATTA+AGG | - | chr3_3:74415396-74415415 | None:intergenic | 15.0% |
!!! | AAAAAAAATCAAGCTTTATT+TGG | - | chr3_3:74416282-74416301 | None:intergenic | 15.0% |
!!! | TAAATAAATGCATTGTTTTA+TGG | + | chr3_3:74416322-74416341 | Msa0472010:intron | 15.0% |
!! | AATATATAAAGATATTGTTG+GGG | - | chr3_3:74417613-74417632 | None:intergenic | 15.0% |
!! | GAATATATAAAGATATTGTT+GGG | - | chr3_3:74417614-74417633 | None:intergenic | 15.0% |
!! | AGAATATATAAAGATATTGT+TGG | - | chr3_3:74417615-74417634 | None:intergenic | 15.0% |
!! | TATATGCTTATTATATTTGT+TGG | + | chr3_3:74417690-74417709 | Msa0472010:intron | 15.0% |
!!! | ATTTAAACTATTCTTTTAAC+AGG | - | chr3_3:74417809-74417828 | None:intergenic | 15.0% |
!!! | GTTTAAATTACACTATTTTA+TGG | + | chr3_3:74417821-74417840 | Msa0472010:intron | 15.0% |
!! | TATTTCTCAGTTAAAAATAT+GGG | - | chr3_3:74419295-74419314 | None:intergenic | 15.0% |
!! | ATATTTCTCAGTTAAAAATA+TGG | - | chr3_3:74419296-74419315 | None:intergenic | 15.0% |
!!! | TGTTAAGTATTATCATTTTA+GGG | + | chr3_3:74419554-74419573 | Msa0472010:intron | 15.0% |
!! | ACATATTTCAAAAGTTTAAA+AGG | - | chr3_3:74419656-74419675 | None:intergenic | 15.0% |
!!! | TTTTAAACTTTTGAAATATG+TGG | + | chr3_3:74419655-74419674 | Msa0472010:intron | 15.0% |
!!! | TTTAAACTTTTGAAATATGT+GGG | + | chr3_3:74419656-74419675 | Msa0472010:intron | 15.0% |
!! | ATTAATTATAATCTTTGACT+TGG | + | chr3_3:74419786-74419805 | Msa0472010:intron | 15.0% |
!! | TACATATATAATCATATCAA+TGG | + | chr3_3:74420718-74420737 | Msa0472010:intron | 15.0% |
!!! | ATTTTTTTTTTTAACCGATA+AGG | + | chr3_3:74420811-74420830 | Msa0472010:intron | 15.0% |
!!! | AAAAAATTTATAAGCCTTAT+CGG | - | chr3_3:74420828-74420847 | None:intergenic | 15.0% |
!!! | AAATTCATTAAAAGCTTTAT+AGG | - | chr3_3:74422370-74422389 | None:intergenic | 15.0% |
!!! | TGTTAAGTATTATCATTTTA+GGG | + | chr3_3:74419554-74419573 | Msa0472010:intron | 15.0% |
!! | ACATATTTCAAAAGTTTAAA+AGG | - | chr3_3:74419656-74419675 | None:intergenic | 15.0% |
!!! | TTTTAAACTTTTGAAATATG+TGG | + | chr3_3:74419655-74419674 | Msa0472010:intron | 15.0% |
!!! | TTTAAACTTTTGAAATATGT+GGG | + | chr3_3:74419656-74419675 | Msa0472010:intron | 15.0% |
!! | AGAAAAATTGTTGTAAAATT+AGG | - | chr3_3:74423464-74423483 | None:intergenic | 15.0% |
!! | ATTAATTAAATATATGGTGT+TGG | + | chr3_3:74423708-74423727 | Msa0472010:intron | 15.0% |
!!! | TTTCATGTTTTGTTTTGATT+TGG | + | chr3_3:74416246-74416265 | Msa0472010:intron | 20.0% |
!!! | TTTCTAGTTTGTTATTGATT+TGG | + | chr3_3:74416363-74416382 | Msa0472010:intron | 20.0% |
!! | ATGATTAAACTTATTGAGTA+AGG | - | chr3_3:74417157-74417176 | None:intergenic | 20.0% |
!! | AATAAACATCACTAAACAAT+AGG | - | chr3_3:74417312-74417331 | None:intergenic | 20.0% |
!! | ATATATAAAGATATTGTTGG+GGG | - | chr3_3:74417612-74417631 | None:intergenic | 20.0% |
!!! | TTAGTACTTGATATTTTGTT+GGG | - | chr3_3:74417642-74417661 | None:intergenic | 20.0% |
!! | AATATAATAAGCATATACAC+AGG | - | chr3_3:74417687-74417706 | None:intergenic | 20.0% |
!!! | TATATATGGTCTTTTTTACT+TGG | + | chr3_3:74417774-74417793 | Msa0472010:intron | 20.0% |
!!! | GTGTTAAGTATTATCATTTT+AGG | + | chr3_3:74419553-74419572 | Msa0472010:intron | 20.0% |
!! | AATTAGAAAAAGAACTTTCT+GGG | - | chr3_3:74419633-74419652 | None:intergenic | 20.0% |
!! | CTTAAGATTGTTGTAAAATT+AGG | - | chr3_3:74420373-74420392 | None:intergenic | 20.0% |
!!! | CTAATTTTACAACAATCTTA+AGG | + | chr3_3:74420371-74420390 | Msa0472010:intron | 20.0% |
!! | TATTTATATGAGAGTAATGA+AGG | + | chr3_3:74420461-74420480 | Msa0472010:intron | 20.0% |
!! | ATTTATATGAGAGTAATGAA+GGG | + | chr3_3:74420462-74420481 | Msa0472010:intron | 20.0% |
!! | AAAGATATCATTGATCAAAT+TGG | + | chr3_3:74420860-74420879 | Msa0472010:intron | 20.0% |
!!! | AAACTTTATCTTAAGAGTTT+TGG | + | chr3_3:74420928-74420947 | Msa0472010:intron | 20.0% |
!!! | AACTTTATCTTAAGAGTTTT+GGG | + | chr3_3:74420929-74420948 | Msa0472010:intron | 20.0% |
!! | CAAATGAAATATAAGAATAG+AGG | - | chr3_3:74421245-74421264 | None:intergenic | 20.0% |
!!! | TTTATCCTTTAAAAAAGTCT+CGG | - | chr3_3:74421301-74421320 | None:intergenic | 20.0% |
!!! | TATGAGATTATTTTTCATTG+TGG | + | chr3_3:74421556-74421575 | Msa0472010:intron | 20.0% |
!!! | TAGGTATAGATTTATTTTAC+AGG | - | chr3_3:74421614-74421633 | None:intergenic | 20.0% |
!! | CATTGAGAAAATATAACTTT+AGG | - | chr3_3:74421633-74421652 | None:intergenic | 20.0% |
!!! | AAAGTTATATTTTCTCAATG+TGG | + | chr3_3:74421633-74421652 | Msa0472010:intron | 20.0% |
!!! | AAGTTATATTTTCTCAATGT+GGG | + | chr3_3:74421634-74421653 | Msa0472010:intron | 20.0% |
!! | CATTCGTAAATTTATTATAC+AGG | - | chr3_3:74421900-74421919 | None:intergenic | 20.0% |
!! | CTGTATAATAAATTTACGAA+TGG | + | chr3_3:74421898-74421917 | Msa0472010:intron | 20.0% |
!! | GACATGTATAAAAATAACTA+TGG | + | chr3_3:74421972-74421991 | Msa0472010:intron | 20.0% |
!! | TAGACTTTGATAAATATATG+AGG | + | chr3_3:74422013-74422032 | Msa0472010:intron | 20.0% |
!!! | GTGTTAAGTATTATCATTTT+AGG | + | chr3_3:74419553-74419572 | Msa0472010:intron | 20.0% |
!! | AATTAGAAAAAGAACTTCTT+GGG | - | chr3_3:74422726-74422745 | None:intergenic | 20.0% |
!!! | TTGTTGTTGGTTTTTTTTGT+AGG | - | chr3_3:74414790-74414809 | None:intergenic | 25.0% |
! | CATGATTATCAAAGAATGAA+CGG | - | chr3_3:74414903-74414922 | None:intergenic | 25.0% |
! | GTGAAAAGGTTGAAAATTTA+AGG | - | chr3_3:74415049-74415068 | None:intergenic | 25.0% |
! | AAACACAAACTAACCTTTAA+GGG | - | chr3_3:74415094-74415113 | None:intergenic | 25.0% |
! | TAAACACAAACTAACCTTTA+AGG | - | chr3_3:74415095-74415114 | None:intergenic | 25.0% |
! | TATGATTTACAAGTACTTGA+TGG | + | chr3_3:74415304-74415323 | Msa0472010:CDS | 25.0% |
!! | AAAAAGCAGAAAAAGTTGAT+GGG | - | chr3_3:74415444-74415463 | None:intergenic | 25.0% |
! | AAAAAAGCAGAAAAAGTTGA+TGG | - | chr3_3:74415445-74415464 | None:intergenic | 25.0% |
!!! | TACAAACTTTTGACTCAAAA+TGG | - | chr3_3:74415472-74415491 | None:intergenic | 25.0% |
! | AAGGTAAATAGAATGAAAAG+TGG | - | chr3_3:74415501-74415520 | None:intergenic | 25.0% |
! | ATAGTCATCATCAAATCAAA+AGG | + | chr3_3:74415816-74415835 | Msa0472010:CDS | 25.0% |
! | TAGTCATCATCAAATCAAAA+GGG | + | chr3_3:74415817-74415836 | Msa0472010:CDS | 25.0% |
!! | TATTTTCTTGTAGTTGGATT+AGG | - | chr3_3:74415899-74415918 | None:intergenic | 25.0% |
! | AATCCAACTACAAGAAAATA+TGG | + | chr3_3:74415899-74415918 | Msa0472010:CDS | 25.0% |
! | TATGCAAAGAAAATGAAGAT+TGG | - | chr3_3:74415970-74415989 | None:intergenic | 25.0% |
! | ATATTGAGTTTGACTAAATC+AGG | + | chr3_3:74416078-74416097 | Msa0472010:intron | 25.0% |
!!! | TGTCTTTGTTTGTTTTGATT+TGG | + | chr3_3:74416208-74416227 | Msa0472010:intron | 25.0% |
! | ACAAAACATGAAAGTGAATA+AGG | - | chr3_3:74416239-74416258 | None:intergenic | 25.0% |
! | TTTAAGAGTGAATTTCATAG+AGG | - | chr3_3:74416306-74416325 | None:intergenic | 25.0% |
!!! | GTTTTATGGTGTTAGTATTA+TGG | + | chr3_3:74416336-74416355 | Msa0472010:intron | 25.0% |
!! | ATTTGGTGAATTGAATGAAA+AGG | + | chr3_3:74416380-74416399 | Msa0472010:intron | 25.0% |
! | TTTGGTGAATTGAATGAAAA+GGG | + | chr3_3:74416381-74416400 | Msa0472010:intron | 25.0% |
! | AACAAACAACACTATTGTAT+TGG | - | chr3_3:74417493-74417512 | None:intergenic | 25.0% |
!! | GTTAGTACTTGATATTTTGT+TGG | - | chr3_3:74417643-74417662 | None:intergenic | 25.0% |
! | AATGTGTAATAAATGCCATA+TGG | + | chr3_3:74417738-74417757 | Msa0472010:intron | 25.0% |
! | ATGTGTAATAAATGCCATAT+GGG | + | chr3_3:74417739-74417758 | Msa0472010:intron | 25.0% |
! | GGTGAAAATTGAAGTATATA+TGG | + | chr3_3:74417760-74417779 | Msa0472010:intron | 25.0% |
! | GTATACAATTTGACATAACA+TGG | - | chr3_3:74418072-74418091 | None:intergenic | 25.0% |
! | AGACAAGATAATATTTCACA+TGG | - | chr3_3:74418126-74418145 | None:intergenic | 25.0% |
!! | GACACATTAACAAAATGTTT+TGG | + | chr3_3:74418155-74418174 | Msa0472010:intron | 25.0% |
! | GATATTCTTTATCTTGAAGT+CGG | + | chr3_3:74418183-74418202 | Msa0472010:intron | 25.0% |
! | ATATTCTTTATCTTGAAGTC+GGG | + | chr3_3:74418184-74418203 | Msa0472010:intron | 25.0% |
! | GAACTTGACTGAAAAAAATA+AGG | - | chr3_3:74418439-74418458 | None:intergenic | 25.0% |
! | AAATTAGTGACTGTGATATA+TGG | + | chr3_3:74418465-74418484 | Msa0472010:intron | 25.0% |
!! | CGATCTTGATCATTTTAAAT+CGG | + | chr3_3:74418532-74418551 | Msa0472010:intron | 25.0% |
! | TCATTACTCAGATATTATCA+AGG | - | chr3_3:74418707-74418726 | None:intergenic | 25.0% |
! | TCAATTGTGTATACAGTTAT+AGG | - | chr3_3:74418852-74418871 | None:intergenic | 25.0% |
! | TTACATGAGAATTAGAAGTA+TGG | + | chr3_3:74418967-74418986 | Msa0472010:intron | 25.0% |
!!! | GTAAAGTTGATTTCAGATTT+TGG | + | chr3_3:74419010-74419029 | Msa0472010:intron | 25.0% |
!!! | AGATTTTGGAAGCAATTATA+AGG | + | chr3_3:74419024-74419043 | Msa0472010:intron | 25.0% |
! | TAGGTCATTATACAAGTATA+TGG | + | chr3_3:74419127-74419146 | Msa0472010:intron | 25.0% |
!! | ACAAAAATTTTGTATGCTAG+AGG | - | chr3_3:74419231-74419250 | None:intergenic | 25.0% |
! | GAATTAGAAAAAGAACTTTC+TGG | - | chr3_3:74419634-74419653 | None:intergenic | 25.0% |
!! | TCCTTGATTTTATATCAAGA+AGG | + | chr3_3:74420071-74420090 | Msa0472010:intron | 25.0% |
!! | CCTTGATTTTATATCAAGAA+GGG | + | chr3_3:74420072-74420091 | Msa0472010:intron | 25.0% |
!! | TCTGGATTTATCTGAAATTA+GGG | - | chr3_3:74420420-74420439 | None:intergenic | 25.0% |
! | TATGAATTATATGGATCTTG+TGG | + | chr3_3:74420762-74420781 | Msa0472010:intron | 25.0% |
! | TAAATTAGTGAGATGCATAT+AGG | - | chr3_3:74421035-74421054 | None:intergenic | 25.0% |
! | GTTTAAATGAACTTACATTG+AGG | + | chr3_3:74421087-74421106 | Msa0472010:intron | 25.0% |
!!! | ACAATTTTTCTGAAATGCAT+TGG | + | chr3_3:74421123-74421142 | Msa0472010:intron | 25.0% |
! | TAAATCATCTTGTGTTTGAT+TGG | + | chr3_3:74421214-74421233 | Msa0472010:intron | 25.0% |
! | ATTGATGTGAATGGAATAAT+AGG | + | chr3_3:74421332-74421351 | Msa0472010:intron | 25.0% |
!! | AGTTATATTTTCTCAATGTG+GGG | + | chr3_3:74421635-74421654 | Msa0472010:intron | 25.0% |
!!! | ATTGCATTATTTTGATGCAA+TGG | - | chr3_3:74421781-74421800 | None:intergenic | 25.0% |
! | ACAAATTTATTTCATCCCAA+GGG | - | chr3_3:74422129-74422148 | None:intergenic | 25.0% |
! | AAATAAATTTGTGTACATCG+AGG | + | chr3_3:74422137-74422156 | Msa0472010:intron | 25.0% |
! | AATAAATTTGTGTACATCGA+GGG | + | chr3_3:74422138-74422157 | Msa0472010:intron | 25.0% |
! | ACTCGAAATTAATAAGTGAT+GGG | + | chr3_3:74422177-74422196 | Msa0472010:intron | 25.0% |
! | AATGAATTTCATATCCCTTA+TGG | + | chr3_3:74422381-74422400 | Msa0472010:intron | 25.0% |
! | ATGAATTTCATATCCCTTAT+GGG | + | chr3_3:74422382-74422401 | Msa0472010:intron | 25.0% |
! | TTATATGAACCAAAATCACT+TGG | - | chr3_3:74422604-74422623 | None:intergenic | 25.0% |
! | GAATTAGAAAAAGAACTTCT+TGG | - | chr3_3:74422727-74422746 | None:intergenic | 25.0% |
!! | TCCTTGATTTTATATCAAGA+AGG | + | chr3_3:74420071-74420090 | Msa0472010:intron | 25.0% |
!! | CCTTGATTTTATATCAAGAA+GGG | + | chr3_3:74420072-74420091 | Msa0472010:intron | 25.0% |
!! | ATTATTAGTGTTTTCAACCT+TGG | + | chr3_3:74423510-74423529 | Msa0472010:intron | 25.0% |
! | GATCAATTGAAGATGAAATA+AGG | + | chr3_3:74423535-74423554 | Msa0472010:intron | 25.0% |
!!! | TTTTAAGTCAATGTGAACAT+TGG | - | chr3_3:74423655-74423674 | None:intergenic | 25.0% |
! | ACTACTAGTGTTATTGTTGT+TGG | - | chr3_3:74414803-74414822 | None:intergenic | 30.0% |
AATAACACTAGTAGTGTTGT+TGG | + | chr3_3:74414808-74414827 | Msa0472010:CDS | 30.0% | |
! | ATAACACTAGTAGTGTTGTT+GGG | + | chr3_3:74414809-74414828 | Msa0472010:CDS | 30.0% |
AAAGACATGTTGTATGTTGT+GGG | - | chr3_3:74414970-74414989 | None:intergenic | 30.0% | |
AAAAGACATGTTGTATGTTG+TGG | - | chr3_3:74414971-74414990 | None:intergenic | 30.0% | |
! | ACAACATACAACATGTCTTT+TGG | + | chr3_3:74414970-74414989 | Msa0472010:CDS | 30.0% |
! | CAACATACAACATGTCTTTT+GGG | + | chr3_3:74414971-74414990 | Msa0472010:CDS | 30.0% |
! | AACATACAACATGTCTTTTG+GGG | + | chr3_3:74414972-74414991 | Msa0472010:CDS | 30.0% |
GCTAATGCTATCATTGATAA+TGG | + | chr3_3:74415015-74415034 | Msa0472010:CDS | 30.0% | |
!! | AATGCTATCATTGATAATGG+CGG | + | chr3_3:74415018-74415037 | Msa0472010:CDS | 30.0% |
ATACATGAAAGAAGATGAGA+AGG | - | chr3_3:74415344-74415363 | None:intergenic | 30.0% | |
TTAAGGAAGAAGAGAGAAAA+GGG | - | chr3_3:74415379-74415398 | None:intergenic | 30.0% | |
ATTAAGGAAGAAGAGAGAAA+AGG | - | chr3_3:74415380-74415399 | None:intergenic | 30.0% | |
!! | CACATTGATTCAATGACAAA+AGG | - | chr3_3:74415520-74415539 | None:intergenic | 30.0% |
TTTGTCATTGAATCAATGTG+TGG | + | chr3_3:74415520-74415539 | Msa0472010:intron | 30.0% | |
AAAGCAACACATGATGAAAA+AGG | - | chr3_3:74415546-74415565 | None:intergenic | 30.0% | |
GAAGAACAGATGGTAAAAAA+TGG | + | chr3_3:74415678-74415697 | Msa0472010:CDS | 30.0% | |
!! | CTTTCACAGTACTTGTTATT+AGG | - | chr3_3:74415725-74415744 | None:intergenic | 30.0% |
! | GATCCATATTTTCTTGTAGT+TGG | - | chr3_3:74415905-74415924 | None:intergenic | 30.0% |
GAAAATGAAGATTGGAGATA+AGG | - | chr3_3:74415962-74415981 | None:intergenic | 30.0% | |
ATACAGATATAAACTCACCT+TGG | - | chr3_3:74416022-74416041 | None:intergenic | 30.0% | |
! | TGATTTTGTTGAATCCCTTA+AGG | + | chr3_3:74416110-74416129 | Msa0472010:intron | 30.0% |
ACAAAGACATAGTACATGTT+TGG | - | chr3_3:74416197-74416216 | None:intergenic | 30.0% | |
TTGGTGAATTGAATGAAAAG+GGG | + | chr3_3:74416382-74416401 | Msa0472010:intron | 30.0% | |
ATTATGATAGGAACTTCCAT+TGG | - | chr3_3:74416500-74416519 | None:intergenic | 30.0% | |
! | GGATTCAGTGTTATTATGAT+AGG | - | chr3_3:74416512-74416531 | None:intergenic | 30.0% |
TGGAAATGAATTCAGATACT+GGG | - | chr3_3:74416533-74416552 | None:intergenic | 30.0% | |
AGTTCAGAACTGTTATATAG+TGG | - | chr3_3:74416553-74416572 | None:intergenic | 30.0% | |
TCAATGAAACTAAAACCTCT+TGG | - | chr3_3:74416652-74416671 | None:intergenic | 30.0% | |
!!! | GTTTTAGTTTCATTGATGCT+TGG | + | chr3_3:74416656-74416675 | Msa0472010:CDS | 30.0% |
TGATAGATCAAGTGATGAAA+GGG | - | chr3_3:74416764-74416783 | None:intergenic | 30.0% | |
TTGATAGATCAAGTGATGAA+AGG | - | chr3_3:74416765-74416784 | None:intergenic | 30.0% | |
TTCATCACTTGATCTATCAA+TGG | + | chr3_3:74416765-74416784 | Msa0472010:CDS | 30.0% | |
TCATCACTTGATCTATCAAT+GGG | + | chr3_3:74416766-74416785 | Msa0472010:CDS | 30.0% | |
CTAAAATAGCATTCTCAAGT+TGG | + | chr3_3:74416854-74416873 | Msa0472010:CDS | 30.0% | |
TTATTATGCAAAACACCAGA+TGG | - | chr3_3:74417057-74417076 | None:intergenic | 30.0% | |
ATTGAAACTTAAGAAGCAGA+AGG | - | chr3_3:74417208-74417227 | None:intergenic | 30.0% | |
TCACTAAACAATAGGCTATA+AGG | - | chr3_3:74417304-74417323 | None:intergenic | 30.0% | |
TTCACATAAAACAGAAACAC+TGG | - | chr3_3:74417383-74417402 | None:intergenic | 30.0% | |
ACAGGAAAATCAAAATGAGT+AGG | - | chr3_3:74417669-74417688 | None:intergenic | 30.0% | |
! | TACTTCAATTTTCACCCATA+TGG | - | chr3_3:74417756-74417775 | None:intergenic | 30.0% |
ATAGTACATCAAAATCAGCT+AGG | - | chr3_3:74417893-74417912 | None:intergenic | 30.0% | |
GAAATATTATCTTGTCTCCT+TGG | + | chr3_3:74418129-74418148 | Msa0472010:intron | 30.0% | |
!!! | GTATTTTGCTTTTCTGAAGT+AGG | + | chr3_3:74418391-74418410 | Msa0472010:intron | 30.0% |
GATAAATAAGCTTAGAGTGA+TGG | - | chr3_3:74418682-74418701 | None:intergenic | 30.0% | |
! | GAAAGCATGAATTATATCAC+AGG | - | chr3_3:74418774-74418793 | None:intergenic | 30.0% |
CATAAACCAATTAAAGTCTG+AGG | - | chr3_3:74419057-74419076 | None:intergenic | 30.0% | |
! | TAACATACACCAAGTGATTT+TGG | + | chr3_3:74419499-74419518 | Msa0472010:intron | 30.0% |
CTATATGAACCAAAATCACT+TGG | - | chr3_3:74419511-74419530 | None:intergenic | 30.0% | |
TACTTAACACATAGTGAAGT+TGG | - | chr3_3:74419543-74419562 | None:intergenic | 30.0% | |
!!! | AAGTATTATCATTTTAGGGC+TGG | + | chr3_3:74419558-74419577 | Msa0472010:intron | 30.0% |
TTCAAGAGATATCAATGGAA+TGG | - | chr3_3:74419849-74419868 | None:intergenic | 30.0% | |
CCCTTCTTGATATAAAATCA+AGG | - | chr3_3:74420075-74420094 | None:intergenic | 30.0% | |
TCGTTCTACAAATGATGATT+CGG | + | chr3_3:74420186-74420205 | Msa0472010:intron | 30.0% | |
GATGCTGATAAATTTGTAGT+CGG | + | chr3_3:74420234-74420253 | Msa0472010:intron | 30.0% | |
! | TCTTAAGGATTTTCGTATCA+TGG | + | chr3_3:74420386-74420405 | Msa0472010:intron | 30.0% |
! | CTCTGGATTTATCTGAAATT+AGG | - | chr3_3:74420421-74420440 | None:intergenic | 30.0% |
TTGAGACATTACACAAGATA+TGG | + | chr3_3:74420517-74420536 | Msa0472010:intron | 30.0% | |
ATAATCCAAGAAATAGCCAT+CGG | - | chr3_3:74420635-74420654 | None:intergenic | 30.0% | |
TAAATGTTGAGTTTCTGTGT+TGG | + | chr3_3:74420694-74420713 | Msa0472010:intron | 30.0% | |
AAATGTTGAGTTTCTGTGTT+GGG | + | chr3_3:74420695-74420714 | Msa0472010:intron | 30.0% | |
TATGTGCACGTTATTTGATA+AGG | + | chr3_3:74420902-74420921 | Msa0472010:intron | 30.0% | |
ATGTGCACGTTATTTGATAA+GGG | + | chr3_3:74420903-74420922 | Msa0472010:intron | 30.0% | |
TGCATATAGGTAGAATACAA+AGG | - | chr3_3:74421022-74421041 | None:intergenic | 30.0% | |
GACATCTAAATTGATGTGAA+TGG | + | chr3_3:74421323-74421342 | Msa0472010:intron | 30.0% | |
TGGAATAATAGGATCAAGTA+CGG | + | chr3_3:74421343-74421362 | Msa0472010:intron | 30.0% | |
! | GTTATATTTTCTCAATGTGG+GGG | + | chr3_3:74421636-74421655 | Msa0472010:intron | 30.0% |
CAAATTTATTTCATCCCAAG+GGG | - | chr3_3:74422128-74422147 | None:intergenic | 30.0% | |
CACAAATTTATTTCATCCCA+AGG | - | chr3_3:74422130-74422149 | None:intergenic | 30.0% | |
ATAAATTTGTGTACATCGAG+GGG | + | chr3_3:74422139-74422158 | Msa0472010:intron | 30.0% | |
CATCACTTATTAATTTCGAG+TGG | - | chr3_3:74422178-74422197 | None:intergenic | 30.0% | |
CACTCGAAATTAATAAGTGA+TGG | + | chr3_3:74422176-74422195 | Msa0472010:intron | 30.0% | |
! | TAACATACACCAAGTGATTT+TGG | + | chr3_3:74419499-74419518 | Msa0472010:intron | 30.0% |
!!! | AAGTATTATCATTTTAGGGC+TGG | + | chr3_3:74419558-74419577 | Msa0472010:intron | 30.0% |
TTCAAGAGATATCAATGGAA+TGG | - | chr3_3:74419849-74419868 | None:intergenic | 30.0% | |
TATTCTGTACGTAAATCAGT+AGG | - | chr3_3:74423015-74423034 | None:intergenic | 30.0% | |
! | ACTGATTTACGTACAGAATA+TGG | + | chr3_3:74423015-74423034 | Msa0472010:intron | 30.0% |
CCCTTCTTGATATAAAATCA+AGG | - | chr3_3:74420075-74420094 | None:intergenic | 30.0% | |
TCGTTCTACAAATGATGATT+CGG | + | chr3_3:74420186-74420205 | Msa0472010:intron | 30.0% | |
GATGCTGATAAATTTGTAGT+CGG | + | chr3_3:74420234-74420253 | Msa0472010:intron | 30.0% | |
CAATTGAAGATGAAATAAGG+TGG | + | chr3_3:74423538-74423557 | Msa0472010:intron | 30.0% | |
CTCTATATACAAACTGTCTA+AGG | + | chr3_3:74423759-74423778 | Msa0472010:CDS | 30.0% | |
! | TCAAAGGCTTTATGTATCAA+AGG | + | chr3_3:74423853-74423872 | Msa0472010:CDS | 30.0% |
GATTATCAAAGAATGAACGG+TGG | - | chr3_3:74414900-74414919 | None:intergenic | 35.0% | |
! | ACATACAACATGTCTTTTGG+GGG | + | chr3_3:74414973-74414992 | Msa0472010:CDS | 35.0% |
GAAGCAGAAATGTTGTGAAA+AGG | - | chr3_3:74415063-74415082 | None:intergenic | 35.0% | |
CTGAACAATACTTGTGTTTG+TGG | + | chr3_3:74415193-74415212 | Msa0472010:intron | 35.0% | |
AACAATACTTGTGTTTGTGG+TGG | + | chr3_3:74415196-74415215 | Msa0472010:intron | 35.0% | |
!!! | TATCCTTGTTTTTGAAGCAG+TGG | + | chr3_3:74415592-74415611 | Msa0472010:intron | 35.0% |
! | TCAATCTGAGGCTATCAAAT+AGG | + | chr3_3:74415624-74415643 | Msa0472010:CDS | 35.0% |
TGTGAAAGACATATGCATAG+AGG | + | chr3_3:74415737-74415756 | Msa0472010:CDS | 35.0% | |
TTATTTGTGTGAAGTTCCAC+AGG | - | chr3_3:74415782-74415801 | None:intergenic | 35.0% | |
! | TTTCTTGTAGTTGGATTAGG+AGG | - | chr3_3:74415896-74415915 | None:intergenic | 35.0% |
AGATTGGAGATAAGGATGAA+GGG | - | chr3_3:74415954-74415973 | None:intergenic | 35.0% | |
AAGATTGGAGATAAGGATGA+AGG | - | chr3_3:74415955-74415974 | None:intergenic | 35.0% | |
TTTGCATAATAGCAGCTTTG+AGG | + | chr3_3:74415982-74416001 | Msa0472010:CDS | 35.0% | |
GGGATTCAACAAAATCACAA+TGG | - | chr3_3:74416107-74416126 | None:intergenic | 35.0% | |
TTAGAAGATCCAAGCCTTAA+GGG | - | chr3_3:74416127-74416146 | None:intergenic | 35.0% | |
!! | AGTTTGTTGTTATGCATCAG+AGG | - | chr3_3:74416469-74416488 | None:intergenic | 35.0% |
CTGATGCATAACAACAAACT+TGG | + | chr3_3:74416469-74416488 | Msa0472010:CDS | 35.0% | |
AACAAACTTGGAATGACCAA+TGG | + | chr3_3:74416481-74416500 | Msa0472010:CDS | 35.0% | |
GTGGAAATGAATTCAGATAC+TGG | - | chr3_3:74416534-74416553 | None:intergenic | 35.0% | |
GGATTAAGTAAGAGAGGAAA+GGG | - | chr3_3:74416592-74416611 | None:intergenic | 35.0% | |
AGTTTGCATTGGAACAACAA+GGG | - | chr3_3:74416614-74416633 | None:intergenic | 35.0% | |
!! | AGAATTTGTTGCATCACTGA+TGG | - | chr3_3:74416959-74416978 | None:intergenic | 35.0% |
! | GCTTCATTTTCTGATAGTAG+TGG | + | chr3_3:74417084-74417103 | Msa0472010:CDS | 35.0% |
TCCAAATGTTGCATCATCAA+GGG | + | chr3_3:74417116-74417135 | Msa0472010:CDS | 35.0% | |
TAGTATTAGTACACTCTCAC+AGG | - | chr3_3:74417456-74417475 | None:intergenic | 35.0% | |
!! | CAATAGTGTTGTTTGTTGTG+TGG | + | chr3_3:74417496-74417515 | Msa0472010:intron | 35.0% |
AACTTTGACTATGTCAACCA+TGG | + | chr3_3:74417560-74417579 | Msa0472010:intron | 35.0% | |
! | AGAGAACAAAATAGTGGAAC+AGG | - | chr3_3:74417587-74417606 | None:intergenic | 35.0% |
TAACATAGCTCGTACTTTGT+TGG | + | chr3_3:74417865-74417884 | Msa0472010:intron | 35.0% | |
TTTGTTAATGTGTCTTGCCA+AGG | - | chr3_3:74418149-74418168 | None:intergenic | 35.0% | |
! | CAACAAAAAAGAGTGCATTG+TGG | - | chr3_3:74418321-74418340 | None:intergenic | 35.0% |
AACGACAGTTAACTCATTGT+AGG | + | chr3_3:74418347-74418366 | Msa0472010:intron | 35.0% | |
!! | CATGAACTTGCTATTGGTAT+TGG | - | chr3_3:74418498-74418517 | None:intergenic | 35.0% |
!! | ATGTAGCATGAACTTGCTAT+TGG | - | chr3_3:74418504-74418523 | None:intergenic | 35.0% |
AAGAATTTCTTTGTGAACCG+TGG | - | chr3_3:74418648-74418667 | None:intergenic | 35.0% | |
TGCCTGCATAAATATGACTA+TGG | + | chr3_3:74418876-74418895 | Msa0472010:intron | 35.0% | |
GACCATAGTCATATTTATGC+AGG | - | chr3_3:74418881-74418900 | None:intergenic | 35.0% | |
TTAGCACCTCAGACTTTAAT+TGG | + | chr3_3:74419048-74419067 | Msa0472010:intron | 35.0% | |
TTGTAAGCTATCTAGCATCA+TGG | - | chr3_3:74419177-74419196 | None:intergenic | 35.0% | |
GAGACAAAATGTGAGAGTTT+AGG | - | chr3_3:74419209-74419228 | None:intergenic | 35.0% | |
!! | AATCACTTGGTGTATGTTAG+CGG | - | chr3_3:74419498-74419517 | None:intergenic | 35.0% |
AAGAGATATCAATGGAATGG+AGG | - | chr3_3:74419846-74419865 | None:intergenic | 35.0% | |
GCACATTCAAGAGATATCAA+TGG | - | chr3_3:74419854-74419873 | None:intergenic | 35.0% | |
! | CTCTTGAATGTGCTATTATG+TGG | + | chr3_3:74419861-74419880 | Msa0472010:intron | 35.0% |
! | CCAGAATTGTGTTATTGTGA+GGG | - | chr3_3:74420011-74420030 | None:intergenic | 35.0% |
CCTCACAATAACACAATTCT+GGG | + | chr3_3:74420009-74420028 | Msa0472010:intron | 35.0% | |
AATTACGCGGAAAATCCTTA+AGG | + | chr3_3:74420123-74420142 | Msa0472010:intron | 35.0% | |
GATCATGCTTGTAGGAATTA+AGG | + | chr3_3:74420484-74420503 | Msa0472010:intron | 35.0% | |
! | GTGTGGCATTTTGTGTATTA+AGG | + | chr3_3:74420587-74420606 | Msa0472010:intron | 35.0% |
!!! | TCTTGTTTTCCTTTAACCGA+TGG | + | chr3_3:74420616-74420635 | Msa0472010:intron | 35.0% |
! | AAGAAATAGCCATCGGTTAA+AGG | - | chr3_3:74420628-74420647 | None:intergenic | 35.0% |
!! | TTTAACCGATGGCTATTTCT+TGG | + | chr3_3:74420627-74420646 | Msa0472010:intron | 35.0% |
TGTGCACGTTATTTGATAAG+GGG | + | chr3_3:74420904-74420923 | Msa0472010:intron | 35.0% | |
ATAGGTAGAATACAAAGGCA+TGG | - | chr3_3:74421017-74421036 | None:intergenic | 35.0% | |
!!! | CTATGCCGAGACTTTTTTAA+AGG | + | chr3_3:74421293-74421312 | Msa0472010:intron | 35.0% |
AGACTTTATCTAAGTAGACC+TGG | + | chr3_3:74421696-74421715 | Msa0472010:intron | 35.0% | |
AGACCTGGTGATTTATATCA+AGG | + | chr3_3:74421711-74421730 | Msa0472010:intron | 35.0% | |
CTTCCTTGATATAAATCACC+AGG | - | chr3_3:74421717-74421736 | None:intergenic | 35.0% | |
TCCCATGAATAAGGTTCATA+TGG | + | chr3_3:74422223-74422242 | Msa0472010:intron | 35.0% | |
CCCATATGAACCTTATTCAT+GGG | - | chr3_3:74422227-74422246 | None:intergenic | 35.0% | |
CCCATGAATAAGGTTCATAT+GGG | + | chr3_3:74422224-74422243 | Msa0472010:intron | 35.0% | |
ACCCATATGAACCTTATTCA+TGG | - | chr3_3:74422228-74422247 | None:intergenic | 35.0% | |
AATTTCATATCCCTTATGGG+TGG | + | chr3_3:74422385-74422404 | Msa0472010:intron | 35.0% | |
TAATCATACACCACCCATAA+GGG | - | chr3_3:74422398-74422417 | None:intergenic | 35.0% | |
!! | AATCACTTGGTGTATGTTAG+CGG | - | chr3_3:74419498-74419517 | None:intergenic | 35.0% |
TACTTAACACACAGTGAAGT+TGG | - | chr3_3:74422636-74422655 | None:intergenic | 35.0% | |
AAGAGATATCAATGGAATGG+AGG | - | chr3_3:74419846-74419865 | None:intergenic | 35.0% | |
GCACATTCAAGAGATATCAA+TGG | - | chr3_3:74419854-74419873 | None:intergenic | 35.0% | |
! | CTCTTGAATGTGCTATTATG+TGG | + | chr3_3:74419861-74419880 | Msa0472010:intron | 35.0% |
GATTTACGTACAGAATATGG+AGG | + | chr3_3:74423018-74423037 | Msa0472010:intron | 35.0% | |
! | CCAGAATTGTGTTATTGTGA+GGG | - | chr3_3:74420011-74420030 | None:intergenic | 35.0% |
CCTCACAATAACACAATTCT+GGG | + | chr3_3:74420009-74420028 | Msa0472010:intron | 35.0% | |
AATTACGCGGAAAATCCTTA+AGG | + | chr3_3:74420123-74420142 | Msa0472010:intron | 35.0% | |
! | ATTAGTGTTTTCAACCTTGG+TGG | + | chr3_3:74423513-74423532 | Msa0472010:intron | 35.0% |
ACCTTAACTGAAAGTAGCTA+GGG | - | chr3_3:74423617-74423636 | None:intergenic | 35.0% | |
TACCTTAACTGAAAGTAGCT+AGG | - | chr3_3:74423618-74423637 | None:intergenic | 35.0% | |
! | GTTGGAATGAATTCTTTTGC+AGG | + | chr3_3:74423726-74423745 | Msa0472010:intron | 35.0% |
GTTTGCATAATTTCTGTGAG+CGG | + | chr3_3:74423799-74423818 | Msa0472010:CDS | 35.0% | |
TCTGTATCAAATTCTGTGAG+CGG | + | chr3_3:74423823-74423842 | Msa0472010:CDS | 35.0% | |
! | CTAACCTTTAAGGGTTGTGT+TGG | - | chr3_3:74415085-74415104 | None:intergenic | 40.0% |
CATTGAGCAATTGTGAAAGG+AGG | - | chr3_3:74415263-74415282 | None:intergenic | 40.0% | |
CTCCTTTCACAATTGCTCAA+TGG | + | chr3_3:74415261-74415280 | Msa0472010:CDS | 40.0% | |
CTCCATTGAGCAATTGTGAA+AGG | - | chr3_3:74415266-74415285 | None:intergenic | 40.0% | |
GAAAGAAGATGAGAAGGAAC+AGG | - | chr3_3:74415338-74415357 | None:intergenic | 40.0% | |
CATCCACTGCTTCAAAAACA+AGG | - | chr3_3:74415598-74415617 | None:intergenic | 40.0% | |
!!! | CTTGTTTTTGAAGCAGTGGA+TGG | + | chr3_3:74415596-74415615 | Msa0472010:intron | 40.0% |
TAGGAACAATACTGATCCAG+AGG | + | chr3_3:74415643-74415662 | Msa0472010:CDS | 40.0% | |
! | TTCACTGCCTGATTTTACTG+TGG | + | chr3_3:74415865-74415884 | Msa0472010:CDS | 40.0% |
GATTGGAGATAAGGATGAAG+GGG | - | chr3_3:74415953-74415972 | None:intergenic | 40.0% | |
AGGCTTCAAATAAGCAACCA+AGG | + | chr3_3:74416002-74416021 | Msa0472010:CDS | 40.0% | |
TTGTTGAATCCCTTAAGGCT+TGG | + | chr3_3:74416115-74416134 | Msa0472010:intron | 40.0% | |
CTTAGAAGATCCAAGCCTTA+AGG | - | chr3_3:74416128-74416147 | None:intergenic | 40.0% | |
GAATTGAATGAAAAGGGGCT+TGG | + | chr3_3:74416387-74416406 | Msa0472010:intron | 40.0% | |
AATGGAGATCCAATTTCCCT+TGG | + | chr3_3:74416421-74416440 | Msa0472010:CDS | 40.0% | |
!! | TTAGAAGCACCAAGGGAAAT+TGG | - | chr3_3:74416433-74416452 | None:intergenic | 40.0% |
!! | TCCTGAATTAGAAGCACCAA+GGG | - | chr3_3:74416440-74416459 | None:intergenic | 40.0% |
!! | ATCCTGAATTAGAAGCACCA+AGG | - | chr3_3:74416441-74416460 | None:intergenic | 40.0% |
! | TTGGTGCTTCTAATTCAGGA+TGG | + | chr3_3:74416440-74416459 | Msa0472010:CDS | 40.0% |
GGGATTAAGTAAGAGAGGAA+AGG | - | chr3_3:74416593-74416612 | None:intergenic | 40.0% | |
ACAAGGGGATTAAGTAAGAG+AGG | - | chr3_3:74416598-74416617 | None:intergenic | 40.0% | |
GTTTGCATTGGAACAACAAG+GGG | - | chr3_3:74416613-74416632 | None:intergenic | 40.0% | |
GAGTTTGCATTGGAACAACA+AGG | - | chr3_3:74416615-74416634 | None:intergenic | 40.0% | |
TCAGATTGGAGAGTTTGCAT+TGG | - | chr3_3:74416625-74416644 | None:intergenic | 40.0% | |
AACCTCTTGGTTTCTCAGAT+TGG | - | chr3_3:74416639-74416658 | None:intergenic | 40.0% | |
AACTGATGCAGAACCATTGT+TGG | - | chr3_3:74416731-74416750 | None:intergenic | 40.0% | |
! | AACAATGGTTCTGCATCAGT+TGG | + | chr3_3:74416730-74416749 | Msa0472010:CDS | 40.0% |
TCACTTGATCTATCAATGGG+AGG | + | chr3_3:74416769-74416788 | Msa0472010:CDS | 40.0% | |
CTGATGGAAGTAACATTGCT+TGG | - | chr3_3:74416943-74416962 | None:intergenic | 40.0% | |
ACAAATCGTGTCGAATCCAT+TGG | + | chr3_3:74417003-74417022 | Msa0472010:CDS | 40.0% | |
GTCCAAATGTTGCATCATCA+AGG | + | chr3_3:74417115-74417134 | Msa0472010:CDS | 40.0% | |
CTGATCCAATTGTTGTCTGT+CGG | + | chr3_3:74417521-74417540 | Msa0472010:intron | 40.0% | |
CTTATCCGACAGACAACAAT+TGG | - | chr3_3:74417529-74417548 | None:intergenic | 40.0% | |
! | AAAATAGTGGAACAGGTCCA+TGG | - | chr3_3:74417580-74417599 | None:intergenic | 40.0% |
GGGGATAGAGAACAAAATAG+TGG | - | chr3_3:74417593-74417612 | None:intergenic | 40.0% | |
AACCACACACACATGTTTGA+TGG | - | chr3_3:74418015-74418034 | None:intergenic | 40.0% | |
ATCAAACATGTGTGTGTGGT+TGG | + | chr3_3:74418014-74418033 | Msa0472010:intron | 40.0% | |
TCAAACATGTGTGTGTGGTT+GGG | + | chr3_3:74418015-74418034 | Msa0472010:intron | 40.0% | |
TTCTTTATCTTGAAGTCGGG+AGG | + | chr3_3:74418187-74418206 | Msa0472010:intron | 40.0% | |
TTGCTTATTGGTCGGATGAA+TGG | - | chr3_3:74418298-74418317 | None:intergenic | 40.0% | |
CATTGTGGTTGCTTATTGGT+CGG | - | chr3_3:74418306-74418325 | None:intergenic | 40.0% | |
AGTGCATTGTGGTTGCTTAT+TGG | - | chr3_3:74418310-74418329 | None:intergenic | 40.0% | |
!! | GAACTTGCTATTGGTATTGG+AGG | - | chr3_3:74418495-74418514 | None:intergenic | 40.0% |
! | AGCTTAGAGTGATGGTGAAT+CGG | - | chr3_3:74418674-74418693 | None:intergenic | 40.0% |
TCGAAAGTGACAAGTGGTTT+AGG | + | chr3_3:74419108-74419127 | Msa0472010:intron | 40.0% | |
! | TGATTAGTTACCGAAACCGT+AGG | + | chr3_3:74419151-74419170 | Msa0472010:intron | 40.0% |
GAGCACTCATGAAATAATCC+AGG | + | chr3_3:74419401-74419420 | Msa0472010:intron | 40.0% | |
GTAGATGTGATGCATCAAAC+TGG | - | chr3_3:74419602-74419621 | None:intergenic | 40.0% | |
TATGTGGCTTCTTTCTTGCT+TGG | + | chr3_3:74419877-74419896 | Msa0472010:intron | 40.0% | |
GATGAAGCACGTACAGAATA+TGG | + | chr3_3:74419924-74419943 | Msa0472010:intron | 40.0% | |
CCCTCACAATAACACAATTC+TGG | + | chr3_3:74420008-74420027 | Msa0472010:intron | 40.0% | |
! | CCCAGAATTGTGTTATTGTG+AGG | - | chr3_3:74420012-74420031 | None:intergenic | 40.0% |
AAGAAGGGTCTGTTAAATCC+TGG | + | chr3_3:74420087-74420106 | Msa0472010:intron | 40.0% | |
TAATTATACGCTAATCCGCC+AGG | - | chr3_3:74420108-74420127 | None:intergenic | 40.0% | |
!! | CGGATTAGCGTATAATTACG+CGG | + | chr3_3:74420110-74420129 | Msa0472010:intron | 40.0% |
!! | ACAAATGATGATTCGGTAGC+AGG | + | chr3_3:74420193-74420212 | Msa0472010:intron | 40.0% |
ATTCGGTAGCAGGTTCAATT+TGG | + | chr3_3:74420203-74420222 | Msa0472010:intron | 40.0% | |
! | CGACACATCAAAATTGACTC+TGG | - | chr3_3:74420438-74420457 | None:intergenic | 40.0% |
AATGAAGGGATCATGCTTGT+AGG | + | chr3_3:74420476-74420495 | Msa0472010:intron | 40.0% | |
AGAAAACATAACCACCGCTT+GGG | + | chr3_3:74420545-74420564 | Msa0472010:intron | 40.0% | |
TGGATCTTGTGGACATCAAT+CGG | + | chr3_3:74420773-74420792 | Msa0472010:intron | 40.0% | |
! | TTGTCGATTAGACCTCAATG+TGG | + | chr3_3:74421660-74421679 | Msa0472010:intron | 40.0% |
! | TGTCGATTAGACCTCAATGT+GGG | + | chr3_3:74421661-74421680 | Msa0472010:intron | 40.0% |
AAGCGACATCACTATCAATG+TGG | - | chr3_3:74421936-74421955 | None:intergenic | 40.0% | |
GATCTCCAATCACAAAGGTT+GGG | - | chr3_3:74422205-74422224 | None:intergenic | 40.0% | |
GATTGGAGATCCCATGAATA+AGG | + | chr3_3:74422214-74422233 | Msa0472010:intron | 40.0% | |
CTAGACACTGCATTATTGAG+AGG | + | chr3_3:74422339-74422358 | Msa0472010:intron | 40.0% | |
CTAATCATACACCACCCATA+AGG | - | chr3_3:74422399-74422418 | None:intergenic | 40.0% | |
GAGCACTCATGAAATAATCC+AGG | + | chr3_3:74419401-74419420 | Msa0472010:intron | 40.0% | |
!! | AATTCTTGTTGTTGGCACTG+TGG | - | chr3_3:74422543-74422562 | None:intergenic | 40.0% |
AGTGCCAACAACAAGAATTG+TGG | + | chr3_3:74422544-74422563 | Msa0472010:intron | 40.0% | |
GTGCCAACAACAAGAATTGT+GGG | + | chr3_3:74422545-74422564 | Msa0472010:intron | 40.0% | |
TGCCAACAACAAGAATTGTG+GGG | + | chr3_3:74422546-74422565 | Msa0472010:intron | 40.0% | |
CTAGATGTGATGCATCAAAC+TGG | - | chr3_3:74422695-74422714 | None:intergenic | 40.0% | |
CAGTTTGATGCATCACATCT+AGG | + | chr3_3:74419600-74419619 | Msa0472010:intron | 40.0% | |
ATGTGGCTTCTTTCTTGCTT+TGG | + | chr3_3:74419878-74419897 | Msa0472010:intron | 40.0% | |
CCCTCACAATAACACAATTC+TGG | + | chr3_3:74420008-74420027 | Msa0472010:intron | 40.0% | |
! | CCCAGAATTGTGTTATTGTG+AGG | - | chr3_3:74420012-74420031 | None:intergenic | 40.0% |
AAGAAGGGTCTGTTAAATCC+TGG | + | chr3_3:74420087-74420106 | Msa0472010:intron | 40.0% | |
AGAAGGGTCTGTTAAATCCT+GGG | + | chr3_3:74420088-74420107 | Msa0472010:intron | 40.0% | |
TAATTATACGCTAATCCCCC+AGG | - | chr3_3:74423199-74423218 | None:intergenic | 40.0% | |
! | GGGATTAGCGTATAATTACG+CGG | + | chr3_3:74423201-74423220 | Msa0472010:intron | 40.0% |
!! | ACAAATGATGATTCGGTAGC+AGG | + | chr3_3:74420193-74420212 | Msa0472010:intron | 40.0% |
CATCTTCAATTGATCCACCA+AGG | - | chr3_3:74423530-74423549 | None:intergenic | 40.0% | |
CCAAACAAAGGTCAGTTTCA+AGG | - | chr3_3:74423584-74423603 | None:intergenic | 40.0% | |
CCTTGAAACTGACCTTTGTT+TGG | + | chr3_3:74423581-74423600 | Msa0472010:intron | 40.0% | |
! | TGAAACTGACCTTTGTTTGG+AGG | + | chr3_3:74423584-74423603 | Msa0472010:intron | 40.0% |
! | GAAACTGACCTTTGTTTGGA+GGG | + | chr3_3:74423585-74423604 | Msa0472010:intron | 40.0% |
! | TCCCTAGCTACTTTCAGTTA+AGG | + | chr3_3:74423613-74423632 | Msa0472010:intron | 40.0% |
! | AAGGACCATTTGGAGTATGA+AGG | - | chr3_3:74423883-74423902 | None:intergenic | 40.0% |
TGAGTTTCGCGTTCAAGACA+AGG | + | chr3_3:74414762-74414781 | Msa0472010:CDS | 45.0% | |
! | CACTAGTAGTGTTGTTGGGT+CGG | + | chr3_3:74414813-74414832 | Msa0472010:CDS | 45.0% |
GCTGTTGATGCTGATGGTTA+TGG | + | chr3_3:74414943-74414962 | Msa0472010:CDS | 45.0% | |
GCTTCCAACACAACCCTTAA+AGG | + | chr3_3:74415078-74415097 | Msa0472010:CDS | 45.0% | |
!!! | GTTTTTGAAGCAGTGGATGG+TGG | + | chr3_3:74415599-74415618 | Msa0472010:intron | 45.0% |
! | TGGATGGTGGTTTCAATCTG+AGG | + | chr3_3:74415612-74415631 | Msa0472010:CDS | 45.0% |
AACAATACTGATCCAGAGGC+TGG | + | chr3_3:74415647-74415666 | Msa0472010:CDS | 45.0% | |
TTCCACAGGCTTTCTTGAAC+GGG | - | chr3_3:74415768-74415787 | None:intergenic | 45.0% | |
GTTCCACAGGCTTTCTTGAA+CGG | - | chr3_3:74415769-74415788 | None:intergenic | 45.0% | |
GGAACAGCCACAGTAAAATC+AGG | - | chr3_3:74415875-74415894 | None:intergenic | 45.0% | |
!! | TCCCTTGGTGCTTCTAATTC+AGG | + | chr3_3:74416436-74416455 | Msa0472010:CDS | 45.0% |
CTCCAATCTGAGAAACCAAG+AGG | + | chr3_3:74416634-74416653 | Msa0472010:CDS | 45.0% | |
TTGGTCTAATGCAGAGACAG+TGG | + | chr3_3:74416675-74416694 | Msa0472010:CDS | 45.0% | |
TGATGCAGAACCATTGTTGG+AGG | - | chr3_3:74416728-74416747 | None:intergenic | 45.0% | |
GTCCACTAGCTGAAGTTCTA+AGG | + | chr3_3:74416917-74416936 | Msa0472010:CDS | 45.0% | |
TCGAATCCATTGGCACTTCA+GGG | + | chr3_3:74417013-74417032 | Msa0472010:CDS | 45.0% | |
GGAATGGTATCATCTCCATC+TGG | + | chr3_3:74417039-74417058 | Msa0472010:CDS | 45.0% | |
!! | GCCCTTGATGATGCAACATT+TGG | - | chr3_3:74417120-74417139 | None:intergenic | 45.0% |
CGACAGACAACAATTGGATC+AGG | - | chr3_3:74417523-74417542 | None:intergenic | 45.0% | |
! | CACACACATGTTTGATGGCT+AGG | - | chr3_3:74418010-74418029 | None:intergenic | 45.0% |
AGCCATCAAACATGTGTGTG+TGG | + | chr3_3:74418010-74418029 | Msa0472010:intron | 45.0% | |
CAAACATGTGTGTGTGGTTG+GGG | + | chr3_3:74418016-74418035 | Msa0472010:intron | 45.0% | |
TTATCTTGAAGTCGGGAGGA+AGG | + | chr3_3:74418191-74418210 | Msa0472010:intron | 45.0% | |
ACACTAACCAGCACTTGCTT+GGG | - | chr3_3:74418373-74418392 | None:intergenic | 45.0% | |
TACACTAACCAGCACTTGCT+TGG | - | chr3_3:74418374-74418393 | None:intergenic | 45.0% | |
! | TTAGAGTGATGGTGAATCGG+TGG | - | chr3_3:74418671-74418690 | None:intergenic | 45.0% |
TCGTTGCTGTATGACACGAT+AGG | + | chr3_3:74418899-74418918 | Msa0472010:intron | 45.0% | |
GCTGTATGACACGATAGGTT+TGG | + | chr3_3:74418904-74418923 | Msa0472010:intron | 45.0% | |
GTATGGCAAGCAGTTCTTGA+TGG | + | chr3_3:74418984-74419003 | Msa0472010:intron | 45.0% | |
GTCACTTCGAAAGTGACAAG+TGG | + | chr3_3:74419102-74419121 | Msa0472010:intron | 45.0% | |
CTATCTAGCATCATGGCCTA+CGG | - | chr3_3:74419170-74419189 | None:intergenic | 45.0% | |
TCACCTATGTGAGTGTCAAG+TGG | + | chr3_3:74419345-74419364 | Msa0472010:intron | 45.0% | |
CACCTATGTGAGTGTCAAGT+GGG | + | chr3_3:74419346-74419365 | Msa0472010:intron | 45.0% | |
ACCTATGTGAGTGTCAAGTG+GGG | + | chr3_3:74419347-74419366 | Msa0472010:intron | 45.0% | |
TCGCCAAGATCTCATACAAG+CGG | - | chr3_3:74419373-74419392 | None:intergenic | 45.0% | |
TGAGATCTTGGCGAAATCTC+TGG | + | chr3_3:74419379-74419398 | Msa0472010:intron | 45.0% | |
TCTGTACGTGCTTCATCAGT+AGG | - | chr3_3:74419921-74419940 | None:intergenic | 45.0% | |
GAAGCACGTACAGAATATGG+AGG | + | chr3_3:74419927-74419946 | Msa0472010:intron | 45.0% | |
AAGGGTCTGTTAAATCCTGG+CGG | + | chr3_3:74420090-74420109 | Msa0472010:intron | 45.0% | |
GAGAAAACATAACCACCGCT+TGG | + | chr3_3:74420544-74420563 | Msa0472010:intron | 45.0% | |
ATCTTGTGGACATCAATCGG+TGG | + | chr3_3:74420776-74420795 | Msa0472010:intron | 45.0% | |
GTCGATTAGACCTCAATGTG+GGG | + | chr3_3:74421662-74421681 | Msa0472010:intron | 45.0% | |
TCGATTAGACCTCAATGTGG+GGG | + | chr3_3:74421663-74421682 | Msa0472010:intron | 45.0% | |
AGCTACTAAACAAAGCCCCT+TGG | + | chr3_3:74422110-74422129 | Msa0472010:intron | 45.0% | |
GCTACTAAACAAAGCCCCTT+GGG | + | chr3_3:74422111-74422130 | Msa0472010:intron | 45.0% | |
TTTGTGTACATCGAGGGGAT+TGG | + | chr3_3:74422144-74422163 | Msa0472010:intron | 45.0% | |
TTGTGTACATCGAGGGGATT+GGG | + | chr3_3:74422145-74422164 | Msa0472010:intron | 45.0% | |
GGATCTCCAATCACAAAGGT+TGG | - | chr3_3:74422206-74422225 | None:intergenic | 45.0% | |
CATGGGATCTCCAATCACAA+AGG | - | chr3_3:74422210-74422229 | None:intergenic | 45.0% | |
TTGTTTCCGTCCCTTTCCTA+TGG | + | chr3_3:74422301-74422320 | Msa0472010:intron | 45.0% | |
CTCACACACACCATAGGAAA+GGG | - | chr3_3:74422314-74422333 | None:intergenic | 45.0% | |
TCTCACACACACCATAGGAA+AGG | - | chr3_3:74422315-74422334 | None:intergenic | 45.0% | |
TCACCTATGTGAGTGTCAAG+TGG | + | chr3_3:74419345-74419364 | Msa0472010:intron | 45.0% | |
CACCTATGTGAGTGTCAAGT+GGG | + | chr3_3:74419346-74419365 | Msa0472010:intron | 45.0% | |
ACCTATGTGAGTGTCAAGTG+GGG | + | chr3_3:74419347-74419366 | Msa0472010:intron | 45.0% | |
TCGCCAAGATCTCATACAAG+CGG | - | chr3_3:74419373-74419392 | None:intergenic | 45.0% | |
TGAGATCTTGGCGAAATCTC+TGG | + | chr3_3:74419379-74419398 | Msa0472010:intron | 45.0% | |
AAATAATCCAGGCACGTGCA+CGG | + | chr3_3:74422505-74422524 | Msa0472010:intron | 45.0% | |
GCCAACAACAAGAATTGTGG+GGG | + | chr3_3:74419454-74419473 | Msa0472010:intron | 45.0% | |
! | ACCCCCACAATTCTTGTTGT+TGG | - | chr3_3:74419458-74419477 | None:intergenic | 45.0% |
GAAGGGTCTGTTAAATCCTG+GGG | + | chr3_3:74420089-74420108 | Msa0472010:intron | 45.0% | |
AAGGGTCTGTTAAATCCTGG+GGG | + | chr3_3:74420090-74420109 | Msa0472010:intron | 45.0% | |
ATTCGGTAGCAGGTTCGATT+TGG | + | chr3_3:74423294-74423313 | Msa0472010:intron | 45.0% | |
!! | ATAAGGTGGAAGTGCTAGCT+AGG | + | chr3_3:74423552-74423571 | Msa0472010:intron | 45.0% |
TGTGAGCGGTTCTGTATCAA+AGG | + | chr3_3:74423813-74423832 | Msa0472010:CDS | 45.0% | |
GCTGTCCTTCATACTCCAAA+TGG | + | chr3_3:74423875-74423894 | Msa0472010:CDS | 45.0% | |
TGGTGTGTCAAAGGACCATT+TGG | - | chr3_3:74423893-74423912 | None:intergenic | 45.0% | |
AAATGGTCCTTTGACACACC+AGG | + | chr3_3:74423892-74423911 | Msa0472010:CDS | 45.0% | |
!!! | AAAATTAATTAACTAATTTT+TGG | - | chr3_3:74422282-74422301 | None:intergenic | 5.0% |
TCTGCTGCTGTTGATGCTGA+TGG | + | chr3_3:74414937-74414956 | Msa0472010:CDS | 50.0% | |
ATGGCGGCTTCAGTAGGAAT+AGG | + | chr3_3:74415233-74415252 | Msa0472010:CDS | 50.0% | |
TGGCGGCTTCAGTAGGAATA+GGG | + | chr3_3:74415234-74415253 | Msa0472010:CDS | 50.0% | |
ATACTGATCCAGAGGCTGGT+AGG | + | chr3_3:74415651-74415670 | Msa0472010:CDS | 50.0% | |
GGTAGGTGCAGAAGAACAGA+TGG | + | chr3_3:74415668-74415687 | Msa0472010:CDS | 50.0% | |
TCCACAGGCTTTCTTGAACG+GGG | - | chr3_3:74415767-74415786 | None:intergenic | 50.0% | |
GAGATAAGGATGAAGGGGAG+TGG | - | chr3_3:74415948-74415967 | None:intergenic | 50.0% | |
GAATGAAAAGGGGCTTGGAG+TGG | + | chr3_3:74416392-74416411 | Msa0472010:intron | 50.0% | |
AGAACCATTGTTGGAGGTGG+TGG | - | chr3_3:74416722-74416741 | None:intergenic | 50.0% | |
TGCAGAACCATTGTTGGAGG+TGG | - | chr3_3:74416725-74416744 | None:intergenic | 50.0% | |
GCTCAATCCAGCACAACCTT+GGG | + | chr3_3:74416876-74416895 | Msa0472010:CDS | 50.0% | |
AATCCAGCACAACCTTGGGT+AGG | + | chr3_3:74416880-74416899 | Msa0472010:CDS | 50.0% | |
GGCCTTAGAACTTCAGCTAG+TGG | - | chr3_3:74416922-74416941 | None:intergenic | 50.0% | |
GTCGAATCCATTGGCACTTC+AGG | + | chr3_3:74417012-74417031 | Msa0472010:CDS | 50.0% | |
TCACAGGCAGAGACTAGAGA+TGG | - | chr3_3:74417440-74417459 | None:intergenic | 50.0% | |
TGATAATCCCGTCAACGCCA+CGG | + | chr3_3:74418628-74418647 | Msa0472010:intron | 50.0% | |
! | TTTGTGAACCGTGGCGTTGA+CGG | - | chr3_3:74418639-74418658 | None:intergenic | 50.0% |
AGCATCATGGCCTACGGTTT+CGG | - | chr3_3:74419164-74419183 | None:intergenic | 50.0% | |
AAATAATCCAGGCACGCGCA+CGG | + | chr3_3:74419412-74419431 | Msa0472010:intron | 50.0% | |
TGCTGATCGCACTGTCCTTA+AGG | - | chr3_3:74420141-74420160 | None:intergenic | 50.0% | |
CATGCAATCAGCTTCCCAAG+CGG | - | chr3_3:74420562-74420581 | None:intergenic | 50.0% | |
GCTGATTGCATGCTCAAGTG+TGG | + | chr3_3:74420570-74420589 | Msa0472010:intron | 50.0% | |
GTGACTGCAAGCGACAACAT+CGG | - | chr3_3:74421868-74421887 | None:intergenic | 50.0% | |
GGGAACCCAACCTTTGTGAT+TGG | + | chr3_3:74422197-74422216 | Msa0472010:intron | 50.0% | |
CACACACCATAGGAAAGGGA+CGG | - | chr3_3:74422310-74422329 | None:intergenic | 50.0% | |
GCACTTCTCACACACACCAT+AGG | - | chr3_3:74422320-74422339 | None:intergenic | 50.0% | |
TGCTGATCGCACTGTCCTTA+AGG | - | chr3_3:74420141-74420160 | None:intergenic | 50.0% | |
GGAGTATGCCCTCCAAACAA+AGG | - | chr3_3:74423596-74423615 | None:intergenic | 50.0% | |
CTACGTACCTGGTGTGTCAA+AGG | - | chr3_3:74423902-74423921 | None:intergenic | 50.0% | |
!! | GGGTCGGTGCAGAGTTTTGA+AGG | + | chr3_3:74414829-74414848 | Msa0472010:CDS | 55.0% |
GGGGGTGATTCTTCTGCTCT+AGG | + | chr3_3:74414991-74415010 | Msa0472010:CDS | 55.0% | |
GTGTTTGTGGTGGTCACAGC+AGG | + | chr3_3:74415206-74415225 | Msa0472010:intron | 55.0% | |
TTTGTGGTGGTCACAGCAGG+TGG | + | chr3_3:74415209-74415228 | Msa0472010:intron | 55.0% | |
TCCCCGTTCAAGAAAGCCTG+TGG | + | chr3_3:74415763-74415782 | Msa0472010:CDS | 55.0% | |
GGCTTGGAGTGGATGCTGAA+TGG | + | chr3_3:74416403-74416422 | Msa0472010:CDS | 55.0% | |
!! | ATTGTTGGAGGTGGTGGTGG+TGG | - | chr3_3:74416716-74416735 | None:intergenic | 55.0% |
ACCACCACCACCTCCAACAA+TGG | + | chr3_3:74416715-74416734 | Msa0472010:CDS | 55.0% | |
! | ACCATTGTTGGAGGTGGTGG+TGG | - | chr3_3:74416719-74416738 | None:intergenic | 55.0% |
GGCTCAATCCAGCACAACCT+TGG | + | chr3_3:74416875-74416894 | Msa0472010:CDS | 55.0% | |
GAACCTACCCAAGGTTGTGC+TGG | - | chr3_3:74416886-74416905 | None:intergenic | 55.0% | |
!! | CCAGGTGTTGAACCTACCCA+AGG | - | chr3_3:74416895-74416914 | None:intergenic | 55.0% |
CCTTGGGTAGGTTCAACACC+TGG | + | chr3_3:74416892-74416911 | Msa0472010:CDS | 55.0% | |
TGGGTAGGTTCAACACCTGG+TGG | + | chr3_3:74416895-74416914 | Msa0472010:CDS | 55.0% | |
! | ACTTCAGCTAGTGGACCACC+AGG | - | chr3_3:74416913-74416932 | None:intergenic | 55.0% |
TCCATTGGCACTTCAGGGAC+AGG | + | chr3_3:74417018-74417037 | Msa0472010:CDS | 55.0% | |
! | TCCTGTCCCTGAAGTGCCAA+TGG | - | chr3_3:74417022-74417041 | None:intergenic | 55.0% |
TGGCACTTCAGGGACAGGAA+TGG | + | chr3_3:74417023-74417042 | Msa0472010:CDS | 55.0% | |
ATGTGTGTGTGGTTGGGGTG+AGG | + | chr3_3:74418021-74418040 | Msa0472010:intron | 55.0% | |
TTGTAGGCCCAAGCAAGTGC+TGG | + | chr3_3:74418363-74418382 | Msa0472010:intron | 55.0% | |
!! | TTGTGAACCGTGGCGTTGAC+GGG | - | chr3_3:74418638-74418657 | None:intergenic | 55.0% |
GCCCCACTTGACACTCACAT+AGG | - | chr3_3:74419351-74419370 | None:intergenic | 55.0% | |
GGGCCGCTTGTATGAGATCT+TGG | + | chr3_3:74419367-74419386 | Msa0472010:intron | 55.0% | |
AGCGACAAACCCCCACATTG+AGG | - | chr3_3:74421675-74421694 | None:intergenic | 55.0% | |
GCCCCACTTGACACTCACAT+AGG | - | chr3_3:74419351-74419370 | None:intergenic | 55.0% | |
GGGCCGCTTGTATGAGATCT+TGG | + | chr3_3:74419367-74419386 | Msa0472010:intron | 55.0% | |
GGTGGTCACAGCAGGTGGAA+TGG | + | chr3_3:74415214-74415233 | Msa0472010:intron | 60.0% | |
GGTCACAGCAGGTGGAATGG+CGG | + | chr3_3:74415217-74415236 | Msa0472010:intron | 60.0% | |
GGTGGAATGGCGGCTTCAGT+AGG | + | chr3_3:74415227-74415246 | Msa0472010:CDS | 60.0% | |
CTTCTGCACCTACCAGCCTC+TGG | - | chr3_3:74415662-74415681 | None:intergenic | 60.0% | |
TGTGTGGTTGGGGTGAGGTG+AGG | + | chr3_3:74418026-74418045 | Msa0472010:intron | 60.0% | |
TTGGGGTGAGGTGAGGTGGT+GGG | + | chr3_3:74418033-74418052 | Msa0472010:intron | 60.0% | |
! | TTGTGGGGGTGTGATGCGAG+TGG | + | chr3_3:74419468-74419487 | Msa0472010:intron | 60.0% |
GCAATCAGCTTCCCAAGCGG+TGG | - | chr3_3:74420559-74420578 | None:intergenic | 60.0% | |
TGGCACTGTGGTGCGCGAAT+AGG | - | chr3_3:74422531-74422550 | None:intergenic | 60.0% | |
! | TTGTGGGGGTGTGATGCGAG+TGG | + | chr3_3:74419468-74419487 | Msa0472010:intron | 60.0% |
!! | GGAGGTGGTGGTGGTGGTGT+TGG | - | chr3_3:74416710-74416729 | None:intergenic | 65.0% |
GTGGTTGGGGTGAGGTGAGG+TGG | + | chr3_3:74418029-74418048 | Msa0472010:intron | 65.0% | |
GTTGGGGTGAGGTGAGGTGG+TGG | + | chr3_3:74418032-74418051 | Msa0472010:intron | 65.0% | |
TGGGGTGAGGTGAGGTGGTG+GGG | + | chr3_3:74418034-74418053 | Msa0472010:intron | 65.0% | |
GAATAGGCCGTGCACGTGCC+TGG | - | chr3_3:74422515-74422534 | None:intergenic | 65.0% | |
GAATAGGCCGTGCGCGTGCC+TGG | - | chr3_3:74419422-74419441 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_3 | gene | 74414757 | 74423921 | 74414757 | ID=Msa0472010;Name=Msa0472010 |
chr3_3 | mRNA | 74414757 | 74423921 | 74414757 | ID=Msa0472010-mRNA-1;Parent=Msa0472010;Name=Msa0472010-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0.25|0|0.8|1|1|5|0|616 |
chr3_3 | exon | 74414757 | 74415099 | 74414757 | ID=Msa0472010-mRNA-1:exon:19040;Parent=Msa0472010-mRNA-1 |
chr3_3 | exon | 74415225 | 74415359 | 74415225 | ID=Msa0472010-mRNA-1:exon:19041;Parent=Msa0472010-mRNA-1 |
chr3_3 | exon | 74415609 | 74416023 | 74415609 | ID=Msa0472010-mRNA-1:exon:19042;Parent=Msa0472010-mRNA-1 |
chr3_3 | exon | 74416402 | 74417185 | 74416402 | ID=Msa0472010-mRNA-1:exon:19043;Parent=Msa0472010-mRNA-1 |
chr3_3 | exon | 74423748 | 74423921 | 74423748 | ID=Msa0472010-mRNA-1:exon:19044;Parent=Msa0472010-mRNA-1 |
chr3_3 | CDS | 74414757 | 74415099 | 74414757 | ID=Msa0472010-mRNA-1:cds;Parent=Msa0472010-mRNA-1 |
chr3_3 | CDS | 74415225 | 74415359 | 74415225 | ID=Msa0472010-mRNA-1:cds;Parent=Msa0472010-mRNA-1 |
chr3_3 | CDS | 74415609 | 74416023 | 74415609 | ID=Msa0472010-mRNA-1:cds;Parent=Msa0472010-mRNA-1 |
chr3_3 | CDS | 74416402 | 74417185 | 74416402 | ID=Msa0472010-mRNA-1:cds;Parent=Msa0472010-mRNA-1 |
chr3_3 | CDS | 74423748 | 74423921 | 74423748 | ID=Msa0472010-mRNA-1:cds;Parent=Msa0472010-mRNA-1 |
Gene Sequence |
Protein sequence |