AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0472010


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0472010 MtrunA17_Chr3g0127641 91.055 559 28 9 1 559 1 537 0.0 916
Msa0472010 MtrunA17_Chr4g0021261 53.153 111 36 1 128 222 25 135 1.10e-33 131
Msa0472010 MtrunA17_Chr1g0152191 49.296 142 45 3 103 219 117 256 4.45e-33 134
Msa0472010 MtrunA17_Chr8g0343881 49.541 109 38 1 129 220 12 120 6.96e-31 124
Msa0472010 MtrunA17_Chr5g0409471 56.000 100 37 2 126 219 14 112 1.99e-30 122
Msa0472010 MtrunA17_Chr4g0070591 47.458 118 45 2 128 228 9 126 1.03e-29 120
Msa0472010 MtrunA17_Chr2g0300511 48.246 114 38 2 128 220 7 120 2.36e-29 119
Msa0472010 MtrunA17_Chr7g0265931 43.704 135 58 2 109 226 60 193 1.54e-28 117
Msa0472010 MtrunA17_Chr8g0351521 47.458 118 52 3 127 234 53 170 1.09e-22 101
Msa0472010 MtrunA17_Chr8g0351521 61.111 54 20 1 161 213 287 340 6.47e-13 71.2
Msa0472010 MtrunA17_Chr8g0351291 56.364 55 23 1 160 213 35 89 4.67e-12 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0472010 AT4G37740.1 55.263 114 34 2 128 225 164 276 4.26e-34 137
Msa0472010 AT5G53660.1 56.522 115 45 3 126 236 57 170 4.38e-32 128
Msa0472010 AT2G22840.1 55.172 116 35 2 128 227 133 247 4.12e-31 128
Msa0472010 AT3G13960.1 49.558 113 40 1 124 219 12 124 8.38e-31 125
Msa0472010 AT4G24150.3 42.331 163 64 5 102 243 90 243 9.40e-30 122
Msa0472010 AT4G24150.2 42.331 163 64 5 102 243 128 281 1.65e-29 122
Msa0472010 AT2G36400.1 51.695 118 35 2 129 225 77 193 1.12e-28 119
Msa0472010 AT3G52910.1 47.321 112 38 1 129 219 83 194 1.54e-26 112
Msa0472010 AT4G24150.1 36.702 188 64 5 102 243 128 306 3.18e-26 113
Msa0472010 AT2G06200.2 45.763 118 36 3 128 217 45 162 2.19e-25 106
Msa0472010 AT2G06200.1 45.763 118 36 3 128 217 6 123 3.10e-25 105
Msa0472010 AT2G45480.2 44.444 108 43 2 126 216 22 129 3.56e-19 89.4
Msa0472010 AT2G45480.1 44.444 108 43 2 126 216 20 127 2.69e-18 88.2
Msa0472010 AT2G45480.1 58.182 55 21 2 174 228 303 355 1.36e-12 70.5
Msa0472010 AT2G45480.3 44.444 108 43 2 126 216 22 129 2.80e-18 88.2
Msa0472010 AT2G45480.3 58.182 55 21 2 174 228 305 357 1.34e-12 70.5
Msa0472010 AT2G06200.3 72.727 44 10 1 176 217 8 51 5.99e-16 76.6

Find 136 sgRNAs with CRISPR-Local

Find 524 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAACACAAACTAACCTTTA+AGG 0.146408 3_3:-74415092 None:intergenic
GTGAAAAGGTTGAAAATTTA+AGG 0.152843 3_3:-74415046 None:intergenic
GCTTCCAACACAACCCTTAA+AGG 0.155280 3_3:+74415078 Msa0472010:CDS
TCCCTTGGTGCTTCTAATTC+AGG 0.206328 3_3:+74416436 Msa0472010:CDS
CTTTCACAGTACTTGTTATT+AGG 0.229946 3_3:-74415722 None:intergenic
GTCGAATCCATTGGCACTTC+AGG 0.255897 3_3:+74417012 Msa0472010:CDS
ACAACATACAACATGTCTTT+TGG 0.266442 3_3:+74414970 Msa0472010:CDS
AATCCAACTACAAGAAAATA+TGG 0.279540 3_3:+74415899 Msa0472010:CDS
TTAGAAGCACCAAGGGAAAT+TGG 0.300986 3_3:-74416430 None:intergenic
AACCTCTTGGTTTCTCAGAT+TGG 0.311180 3_3:-74416636 None:intergenic
CTCTATATACAAACTGTCTA+AGG 0.318672 3_3:+74423759 Msa0472010:CDS
GCCCTTGATGATGCAACATT+TGG 0.323926 3_3:-74417117 None:intergenic
TATGATTTACAAGTACTTGA+TGG 0.325776 3_3:+74415304 Msa0472010:CDS
TCAATCTGAGGCTATCAAAT+AGG 0.341073 3_3:+74415624 Msa0472010:CDS
GTGGAAATGAATTCAGATAC+TGG 0.360987 3_3:-74416531 None:intergenic
AAACACAAACTAACCTTTAA+GGG 0.361293 3_3:-74415091 None:intergenic
ACTACTAGTGTTATTGTTGT+TGG 0.363306 3_3:-74414800 None:intergenic
TTCCACAGGCTTTCTTGAAC+GGG 0.370446 3_3:-74415765 None:intergenic
GTCCACTAGCTGAAGTTCTA+AGG 0.379508 3_3:+74416917 Msa0472010:CDS
ATGATTAAACTTATTGAGTA+AGG 0.386331 3_3:-74417154 None:intergenic
GCTAATGCTATCATTGATAA+TGG 0.393717 3_3:+74415015 Msa0472010:CDS
ATGGCGGCTTCAGTAGGAAT+AGG 0.401179 3_3:+74415233 Msa0472010:CDS
GCTGTTGATGCTGATGGTTA+TGG 0.403679 3_3:+74414943 Msa0472010:CDS
TTCATCACTTGATCTATCAA+TGG 0.407184 3_3:+74416765 Msa0472010:CDS
GGATTCAGTGTTATTATGAT+AGG 0.409147 3_3:-74416509 None:intergenic
ATAGTCATCATCAAATCAAA+AGG 0.419333 3_3:+74415816 Msa0472010:CDS
TTTGCATAATAGCAGCTTTG+AGG 0.429903 3_3:+74415982 Msa0472010:CDS
CTTCTGCACCTACCAGCCTC+TGG 0.433695 3_3:-74415659 None:intergenic
ACCATTGTTGGAGGTGGTGG+TGG 0.435162 3_3:-74416716 None:intergenic
GAAAATGAAGATTGGAGATA+AGG 0.436913 3_3:-74415959 None:intergenic
CTCCTTTCACAATTGCTCAA+TGG 0.446940 3_3:+74415261 Msa0472010:CDS
GGATTAAGTAAGAGAGGAAA+GGG 0.448727 3_3:-74416589 None:intergenic
TCTGCTGCTGTTGATGCTGA+TGG 0.451525 3_3:+74414937 Msa0472010:CDS
ATTGTTGGAGGTGGTGGTGG+TGG 0.456677 3_3:-74416713 None:intergenic
TATGCAAAGAAAATGAAGAT+TGG 0.460286 3_3:-74415967 None:intergenic
GGCTCAATCCAGCACAACCT+TGG 0.462541 3_3:+74416875 Msa0472010:CDS
AACTGATGCAGAACCATTGT+TGG 0.462885 3_3:-74416728 None:intergenic
GAAAGAAGATGAGAAGGAAC+AGG 0.467897 3_3:-74415335 None:intergenic
TCATCACTTGATCTATCAAT+GGG 0.468999 3_3:+74416766 Msa0472010:CDS
CTGATGCATAACAACAAACT+TGG 0.470877 3_3:+74416469 Msa0472010:CDS
TGGTGTGTCAAAGGACCATT+TGG 0.471965 3_3:-74423890 None:intergenic
TCCATTGGCACTTCAGGGAC+AGG 0.476778 3_3:+74417018 Msa0472010:CDS
AAGATTGGAGATAAGGATGA+AGG 0.477847 3_3:-74415952 None:intergenic
CTAAAATAGCATTCTCAAGT+TGG 0.478113 3_3:+74416854 Msa0472010:CDS
AATAACACTAGTAGTGTTGT+TGG 0.478175 3_3:+74414808 Msa0472010:CDS
CTAACCTTTAAGGGTTGTGT+TGG 0.481457 3_3:-74415082 None:intergenic
GGAACAGCCACAGTAAAATC+AGG 0.486638 3_3:-74415872 None:intergenic
GCTCAATCCAGCACAACCTT+GGG 0.488726 3_3:+74416876 Msa0472010:CDS
AGTTCAGAACTGTTATATAG+TGG 0.490372 3_3:-74416550 None:intergenic
TGATAGATCAAGTGATGAAA+GGG 0.490826 3_3:-74416761 None:intergenic
TCAATGAAACTAAAACCTCT+TGG 0.493104 3_3:-74416649 None:intergenic
GAGATAAGGATGAAGGGGAG+TGG 0.496353 3_3:-74415945 None:intergenic
GTCCAAATGTTGCATCATCA+AGG 0.496502 3_3:+74417115 Msa0472010:CDS
GCTGTCCTTCATACTCCAAA+TGG 0.496729 3_3:+74423875 Msa0472010:CDS
AGATTGGAGATAAGGATGAA+GGG 0.498515 3_3:-74415951 None:intergenic
TTATTTGTGTGAAGTTCCAC+AGG 0.498667 3_3:-74415779 None:intergenic
TCGAATCCATTGGCACTTCA+GGG 0.500942 3_3:+74417013 Msa0472010:CDS
AGAACCATTGTTGGAGGTGG+TGG 0.506509 3_3:-74416719 None:intergenic
GTTCCACAGGCTTTCTTGAA+CGG 0.508728 3_3:-74415766 None:intergenic
TTTCTTGTAGTTGGATTAGG+AGG 0.509981 3_3:-74415893 None:intergenic
GGCTTGGAGTGGATGCTGAA+TGG 0.510711 3_3:+74416403 Msa0472010:CDS
CTGATGGAAGTAACATTGCT+TGG 0.510713 3_3:-74416940 None:intergenic
TGGCGGCTTCAGTAGGAATA+GGG 0.511161 3_3:+74415234 Msa0472010:CDS
GATTGGAGATAAGGATGAAG+GGG 0.516351 3_3:-74415950 None:intergenic
GAACCTACCCAAGGTTGTGC+TGG 0.517275 3_3:-74416883 None:intergenic
TCCTGTCCCTGAAGTGCCAA+TGG 0.523915 3_3:-74417019 None:intergenic
TCAGATTGGAGAGTTTGCAT+TGG 0.524106 3_3:-74416622 None:intergenic
GAATTGAATGAAAAGGGGCT+TGG 0.524945 3_3:+74416387 Msa0472010:intron
CACTAGTAGTGTTGTTGGGT+CGG 0.525074 3_3:+74414813 Msa0472010:CDS
GAAGCAGAAATGTTGTGAAA+AGG 0.532749 3_3:-74415060 None:intergenic
GGGATTAAGTAAGAGAGGAA+AGG 0.533228 3_3:-74416590 None:intergenic
GGCCTTAGAACTTCAGCTAG+TGG 0.534033 3_3:-74416919 None:intergenic
TTGATAGATCAAGTGATGAA+AGG 0.535432 3_3:-74416762 None:intergenic
AGAATTTGTTGCATCACTGA+TGG 0.536310 3_3:-74416956 None:intergenic
AATGGAGATCCAATTTCCCT+TGG 0.538520 3_3:+74416421 Msa0472010:CDS
TCAAAGGCTTTATGTATCAA+AGG 0.539763 3_3:+74423853 Msa0472010:CDS
CTCCATTGAGCAATTGTGAA+AGG 0.540021 3_3:-74415263 None:intergenic
GGAATGGTATCATCTCCATC+TGG 0.544391 3_3:+74417039 Msa0472010:CDS
ATTATGATAGGAACTTCCAT+TGG 0.546307 3_3:-74416497 None:intergenic
ACCACCACCACCTCCAACAA+TGG 0.549376 3_3:+74416715 Msa0472010:CDS
CTACGTACCTGGTGTGTCAA+AGG 0.550864 3_3:-74423899 None:intergenic
TATGTATGTACCTACGTACC+TGG 0.553627 3_3:-74423910 None:intergenic
ATACATGAAAGAAGATGAGA+AGG 0.554354 3_3:-74415341 None:intergenic
GGTGGTCACAGCAGGTGGAA+TGG 0.556637 3_3:+74415214 Msa0472010:intron
AACAATGGTTCTGCATCAGT+TGG 0.557664 3_3:+74416730 Msa0472010:CDS
TTATTATGCAAAACACCAGA+TGG 0.559997 3_3:-74417054 None:intergenic
AAAGACATGTTGTATGTTGT+GGG 0.561732 3_3:-74414967 None:intergenic
AAAAGACATGTTGTATGTTG+TGG 0.562174 3_3:-74414968 None:intergenic
AACAATACTGATCCAGAGGC+TGG 0.566845 3_3:+74415647 Msa0472010:CDS
GGTGGAATGGCGGCTTCAGT+AGG 0.567231 3_3:+74415227 Msa0472010:CDS
TGAGTTTCGCGTTCAAGACA+AGG 0.567509 3_3:+74414762 Msa0472010:CDS
TGTGAGCGGTTCTGTATCAA+AGG 0.568478 3_3:+74423837 Msa0472010:CDS
AGTTTGTTGTTATGCATCAG+AGG 0.569252 3_3:-74416466 None:intergenic
AAGGACCATTTGGAGTATGA+AGG 0.571523 3_3:-74423880 None:intergenic
ACAAATCGTGTCGAATCCAT+TGG 0.573702 3_3:+74417003 Msa0472010:CDS
ATAACACTAGTAGTGTTGTT+GGG 0.575929 3_3:+74414809 Msa0472010:CDS
AACAAACTTGGAATGACCAA+TGG 0.577256 3_3:+74416481 Msa0472010:CDS
TAGTCATCATCAAATCAAAA+GGG 0.580379 3_3:+74415817 Msa0472010:CDS
CATGATTATCAAAGAATGAA+CGG 0.581245 3_3:-74414900 None:intergenic
TGCAGAACCATTGTTGGAGG+TGG 0.586637 3_3:-74416722 None:intergenic
TCCTGAATTAGAAGCACCAA+GGG 0.587527 3_3:-74416437 None:intergenic
GTTTGCATAATTTCTGTGAG+CGG 0.590028 3_3:+74423799 Msa0472010:CDS
GAGTTTGCATTGGAACAACA+AGG 0.591725 3_3:-74416612 None:intergenic
ATACTGATCCAGAGGCTGGT+AGG 0.593096 3_3:+74415651 Msa0472010:CDS
TTGGTGCTTCTAATTCAGGA+TGG 0.601100 3_3:+74416440 Msa0472010:CDS
TGGAAATGAATTCAGATACT+GGG 0.603286 3_3:-74416530 None:intergenic
ACAAGGGGATTAAGTAAGAG+AGG 0.605379 3_3:-74416595 None:intergenic
GTTTGCATTGGAACAACAAG+GGG 0.608134 3_3:-74416610 None:intergenic
AAATGGTCCTTTGACACACC+AGG 0.612279 3_3:+74423892 Msa0472010:CDS
CCTTGGGTAGGTTCAACACC+TGG 0.615728 3_3:+74416892 Msa0472010:CDS
TGGATGGTGGTTTCAATCTG+AGG 0.616315 3_3:+74415612 Msa0472010:CDS
TCCCCGTTCAAGAAAGCCTG+TGG 0.619148 3_3:+74415763 Msa0472010:CDS
GGTAGGTGCAGAAGAACAGA+TGG 0.619651 3_3:+74415668 Msa0472010:CDS
GGTCACAGCAGGTGGAATGG+CGG 0.620189 3_3:+74415217 Msa0472010:intron
TCCAAATGTTGCATCATCAA+GGG 0.620644 3_3:+74417116 Msa0472010:CDS
TCTGTATCAAATTCTGTGAG+CGG 0.622185 3_3:+74423823 Msa0472010:CDS
CTCCAATCTGAGAAACCAAG+AGG 0.625201 3_3:+74416634 Msa0472010:CDS
GAATGAAAAGGGGCTTGGAG+TGG 0.630089 3_3:+74416392 Msa0472010:intron
TGGCACTTCAGGGACAGGAA+TGG 0.631431 3_3:+74417023 Msa0472010:CDS
ACTTCAGCTAGTGGACCACC+AGG 0.635831 3_3:-74416910 None:intergenic
TCCACAGGCTTTCTTGAACG+GGG 0.635923 3_3:-74415764 None:intergenic
AGGCTTCAAATAAGCAACCA+AGG 0.637520 3_3:+74416002 Msa0472010:CDS
TAGGAACAATACTGATCCAG+AGG 0.641405 3_3:+74415643 Msa0472010:CDS
TGATGCAGAACCATTGTTGG+AGG 0.644016 3_3:-74416725 None:intergenic
CATTGAGCAATTGTGAAAGG+AGG 0.644246 3_3:-74415260 None:intergenic
AATCCAGCACAACCTTGGGT+AGG 0.661395 3_3:+74416880 Msa0472010:CDS
AGTTTGCATTGGAACAACAA+GGG 0.661506 3_3:-74416611 None:intergenic
CCAGGTGTTGAACCTACCCA+AGG 0.666817 3_3:-74416892 None:intergenic
ATCCTGAATTAGAAGCACCA+AGG 0.673204 3_3:-74416438 None:intergenic
TCACTTGATCTATCAATGGG+AGG 0.680795 3_3:+74416769 Msa0472010:CDS
TTGGTCTAATGCAGAGACAG+TGG 0.682367 3_3:+74416675 Msa0472010:CDS
TGGGTAGGTTCAACACCTGG+TGG 0.687244 3_3:+74416895 Msa0472010:CDS
CTTTGACACACCAGGTACGT+AGG 0.692625 3_3:+74423900 Msa0472010:CDS
TGTGAAAGACATATGCATAG+AGG 0.723539 3_3:+74415737 Msa0472010:CDS
GATTATCAAAGAATGAACGG+TGG 0.727234 3_3:-74414897 None:intergenic
AATGCTATCATTGATAATGG+CGG 0.749635 3_3:+74415018 Msa0472010:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTTCTCAATTAAAAATAT+GGG - chr3_3:74419730-74419749 None:intergenic 10.0%
!! ATATTTCTCAATTAAAAATA+TGG - chr3_3:74419731-74419750 None:intergenic 10.0%
!! TCATTAAATTATGAATTATA+TGG + chr3_3:74420753-74420772 Msa0472010:intron 10.0%
!! AGATATCATAAAATATTATA+TGG + chr3_3:74421454-74421473 Msa0472010:intron 10.0%
!! AAATATTATATGGTATATTA+TGG + chr3_3:74421464-74421483 Msa0472010:intron 10.0%
!!! GTATTAATATTTTAATACAA+TGG - chr3_3:74421495-74421514 None:intergenic 10.0%
!! ATTAATTATAATCTTTGATT+TGG + chr3_3:74422879-74422898 Msa0472010:intron 10.0%
!! CTAGAAATTAATTAAATATA+TGG + chr3_3:74423702-74423721 Msa0472010:intron 10.0%
!! ATATATAGAAAAATAAGTAG+TGG + chr3_3:74415132-74415151 Msa0472010:intron 15.0%
!! TGAAAATATGAAATTGATTA+AGG - chr3_3:74415396-74415415 None:intergenic 15.0%
!!! AAAAAAAATCAAGCTTTATT+TGG - chr3_3:74416282-74416301 None:intergenic 15.0%
!!! TAAATAAATGCATTGTTTTA+TGG + chr3_3:74416322-74416341 Msa0472010:intron 15.0%
!! AATATATAAAGATATTGTTG+GGG - chr3_3:74417613-74417632 None:intergenic 15.0%
!! GAATATATAAAGATATTGTT+GGG - chr3_3:74417614-74417633 None:intergenic 15.0%
!! AGAATATATAAAGATATTGT+TGG - chr3_3:74417615-74417634 None:intergenic 15.0%
!! TATATGCTTATTATATTTGT+TGG + chr3_3:74417690-74417709 Msa0472010:intron 15.0%
!!! ATTTAAACTATTCTTTTAAC+AGG - chr3_3:74417809-74417828 None:intergenic 15.0%
!!! GTTTAAATTACACTATTTTA+TGG + chr3_3:74417821-74417840 Msa0472010:intron 15.0%
!! TATTTCTCAGTTAAAAATAT+GGG - chr3_3:74419295-74419314 None:intergenic 15.0%
!! ATATTTCTCAGTTAAAAATA+TGG - chr3_3:74419296-74419315 None:intergenic 15.0%
!!! TGTTAAGTATTATCATTTTA+GGG + chr3_3:74419554-74419573 Msa0472010:intron 15.0%
!! ACATATTTCAAAAGTTTAAA+AGG - chr3_3:74419656-74419675 None:intergenic 15.0%
!!! TTTTAAACTTTTGAAATATG+TGG + chr3_3:74419655-74419674 Msa0472010:intron 15.0%
!!! TTTAAACTTTTGAAATATGT+GGG + chr3_3:74419656-74419675 Msa0472010:intron 15.0%
!! ATTAATTATAATCTTTGACT+TGG + chr3_3:74419786-74419805 Msa0472010:intron 15.0%
!! TACATATATAATCATATCAA+TGG + chr3_3:74420718-74420737 Msa0472010:intron 15.0%
!!! ATTTTTTTTTTTAACCGATA+AGG + chr3_3:74420811-74420830 Msa0472010:intron 15.0%
!!! AAAAAATTTATAAGCCTTAT+CGG - chr3_3:74420828-74420847 None:intergenic 15.0%
!!! AAATTCATTAAAAGCTTTAT+AGG - chr3_3:74422370-74422389 None:intergenic 15.0%
!!! TGTTAAGTATTATCATTTTA+GGG + chr3_3:74419554-74419573 Msa0472010:intron 15.0%
!! ACATATTTCAAAAGTTTAAA+AGG - chr3_3:74419656-74419675 None:intergenic 15.0%
!!! TTTTAAACTTTTGAAATATG+TGG + chr3_3:74419655-74419674 Msa0472010:intron 15.0%
!!! TTTAAACTTTTGAAATATGT+GGG + chr3_3:74419656-74419675 Msa0472010:intron 15.0%
!! AGAAAAATTGTTGTAAAATT+AGG - chr3_3:74423464-74423483 None:intergenic 15.0%
!! ATTAATTAAATATATGGTGT+TGG + chr3_3:74423708-74423727 Msa0472010:intron 15.0%
!!! TTTCATGTTTTGTTTTGATT+TGG + chr3_3:74416246-74416265 Msa0472010:intron 20.0%
!!! TTTCTAGTTTGTTATTGATT+TGG + chr3_3:74416363-74416382 Msa0472010:intron 20.0%
!! ATGATTAAACTTATTGAGTA+AGG - chr3_3:74417157-74417176 None:intergenic 20.0%
!! AATAAACATCACTAAACAAT+AGG - chr3_3:74417312-74417331 None:intergenic 20.0%
!! ATATATAAAGATATTGTTGG+GGG - chr3_3:74417612-74417631 None:intergenic 20.0%
!!! TTAGTACTTGATATTTTGTT+GGG - chr3_3:74417642-74417661 None:intergenic 20.0%
!! AATATAATAAGCATATACAC+AGG - chr3_3:74417687-74417706 None:intergenic 20.0%
!!! TATATATGGTCTTTTTTACT+TGG + chr3_3:74417774-74417793 Msa0472010:intron 20.0%
!!! GTGTTAAGTATTATCATTTT+AGG + chr3_3:74419553-74419572 Msa0472010:intron 20.0%
!! AATTAGAAAAAGAACTTTCT+GGG - chr3_3:74419633-74419652 None:intergenic 20.0%
!! CTTAAGATTGTTGTAAAATT+AGG - chr3_3:74420373-74420392 None:intergenic 20.0%
!!! CTAATTTTACAACAATCTTA+AGG + chr3_3:74420371-74420390 Msa0472010:intron 20.0%
!! TATTTATATGAGAGTAATGA+AGG + chr3_3:74420461-74420480 Msa0472010:intron 20.0%
!! ATTTATATGAGAGTAATGAA+GGG + chr3_3:74420462-74420481 Msa0472010:intron 20.0%
!! AAAGATATCATTGATCAAAT+TGG + chr3_3:74420860-74420879 Msa0472010:intron 20.0%
!!! AAACTTTATCTTAAGAGTTT+TGG + chr3_3:74420928-74420947 Msa0472010:intron 20.0%
!!! AACTTTATCTTAAGAGTTTT+GGG + chr3_3:74420929-74420948 Msa0472010:intron 20.0%
!! CAAATGAAATATAAGAATAG+AGG - chr3_3:74421245-74421264 None:intergenic 20.0%
!!! TTTATCCTTTAAAAAAGTCT+CGG - chr3_3:74421301-74421320 None:intergenic 20.0%
!!! TATGAGATTATTTTTCATTG+TGG + chr3_3:74421556-74421575 Msa0472010:intron 20.0%
!!! TAGGTATAGATTTATTTTAC+AGG - chr3_3:74421614-74421633 None:intergenic 20.0%
!! CATTGAGAAAATATAACTTT+AGG - chr3_3:74421633-74421652 None:intergenic 20.0%
!!! AAAGTTATATTTTCTCAATG+TGG + chr3_3:74421633-74421652 Msa0472010:intron 20.0%
!!! AAGTTATATTTTCTCAATGT+GGG + chr3_3:74421634-74421653 Msa0472010:intron 20.0%
!! CATTCGTAAATTTATTATAC+AGG - chr3_3:74421900-74421919 None:intergenic 20.0%
!! CTGTATAATAAATTTACGAA+TGG + chr3_3:74421898-74421917 Msa0472010:intron 20.0%
!! GACATGTATAAAAATAACTA+TGG + chr3_3:74421972-74421991 Msa0472010:intron 20.0%
!! TAGACTTTGATAAATATATG+AGG + chr3_3:74422013-74422032 Msa0472010:intron 20.0%
!!! GTGTTAAGTATTATCATTTT+AGG + chr3_3:74419553-74419572 Msa0472010:intron 20.0%
!! AATTAGAAAAAGAACTTCTT+GGG - chr3_3:74422726-74422745 None:intergenic 20.0%
!!! TTGTTGTTGGTTTTTTTTGT+AGG - chr3_3:74414790-74414809 None:intergenic 25.0%
! CATGATTATCAAAGAATGAA+CGG - chr3_3:74414903-74414922 None:intergenic 25.0%
! GTGAAAAGGTTGAAAATTTA+AGG - chr3_3:74415049-74415068 None:intergenic 25.0%
! AAACACAAACTAACCTTTAA+GGG - chr3_3:74415094-74415113 None:intergenic 25.0%
! TAAACACAAACTAACCTTTA+AGG - chr3_3:74415095-74415114 None:intergenic 25.0%
! TATGATTTACAAGTACTTGA+TGG + chr3_3:74415304-74415323 Msa0472010:CDS 25.0%
!! AAAAAGCAGAAAAAGTTGAT+GGG - chr3_3:74415444-74415463 None:intergenic 25.0%
! AAAAAAGCAGAAAAAGTTGA+TGG - chr3_3:74415445-74415464 None:intergenic 25.0%
!!! TACAAACTTTTGACTCAAAA+TGG - chr3_3:74415472-74415491 None:intergenic 25.0%
! AAGGTAAATAGAATGAAAAG+TGG - chr3_3:74415501-74415520 None:intergenic 25.0%
! ATAGTCATCATCAAATCAAA+AGG + chr3_3:74415816-74415835 Msa0472010:CDS 25.0%
! TAGTCATCATCAAATCAAAA+GGG + chr3_3:74415817-74415836 Msa0472010:CDS 25.0%
!! TATTTTCTTGTAGTTGGATT+AGG - chr3_3:74415899-74415918 None:intergenic 25.0%
! AATCCAACTACAAGAAAATA+TGG + chr3_3:74415899-74415918 Msa0472010:CDS 25.0%
! TATGCAAAGAAAATGAAGAT+TGG - chr3_3:74415970-74415989 None:intergenic 25.0%
! ATATTGAGTTTGACTAAATC+AGG + chr3_3:74416078-74416097 Msa0472010:intron 25.0%
!!! TGTCTTTGTTTGTTTTGATT+TGG + chr3_3:74416208-74416227 Msa0472010:intron 25.0%
! ACAAAACATGAAAGTGAATA+AGG - chr3_3:74416239-74416258 None:intergenic 25.0%
! TTTAAGAGTGAATTTCATAG+AGG - chr3_3:74416306-74416325 None:intergenic 25.0%
!!! GTTTTATGGTGTTAGTATTA+TGG + chr3_3:74416336-74416355 Msa0472010:intron 25.0%
!! ATTTGGTGAATTGAATGAAA+AGG + chr3_3:74416380-74416399 Msa0472010:intron 25.0%
! TTTGGTGAATTGAATGAAAA+GGG + chr3_3:74416381-74416400 Msa0472010:intron 25.0%
! AACAAACAACACTATTGTAT+TGG - chr3_3:74417493-74417512 None:intergenic 25.0%
!! GTTAGTACTTGATATTTTGT+TGG - chr3_3:74417643-74417662 None:intergenic 25.0%
! AATGTGTAATAAATGCCATA+TGG + chr3_3:74417738-74417757 Msa0472010:intron 25.0%
! ATGTGTAATAAATGCCATAT+GGG + chr3_3:74417739-74417758 Msa0472010:intron 25.0%
! GGTGAAAATTGAAGTATATA+TGG + chr3_3:74417760-74417779 Msa0472010:intron 25.0%
! GTATACAATTTGACATAACA+TGG - chr3_3:74418072-74418091 None:intergenic 25.0%
! AGACAAGATAATATTTCACA+TGG - chr3_3:74418126-74418145 None:intergenic 25.0%
!! GACACATTAACAAAATGTTT+TGG + chr3_3:74418155-74418174 Msa0472010:intron 25.0%
! GATATTCTTTATCTTGAAGT+CGG + chr3_3:74418183-74418202 Msa0472010:intron 25.0%
! ATATTCTTTATCTTGAAGTC+GGG + chr3_3:74418184-74418203 Msa0472010:intron 25.0%
! GAACTTGACTGAAAAAAATA+AGG - chr3_3:74418439-74418458 None:intergenic 25.0%
! AAATTAGTGACTGTGATATA+TGG + chr3_3:74418465-74418484 Msa0472010:intron 25.0%
!! CGATCTTGATCATTTTAAAT+CGG + chr3_3:74418532-74418551 Msa0472010:intron 25.0%
! TCATTACTCAGATATTATCA+AGG - chr3_3:74418707-74418726 None:intergenic 25.0%
! TCAATTGTGTATACAGTTAT+AGG - chr3_3:74418852-74418871 None:intergenic 25.0%
! TTACATGAGAATTAGAAGTA+TGG + chr3_3:74418967-74418986 Msa0472010:intron 25.0%
!!! GTAAAGTTGATTTCAGATTT+TGG + chr3_3:74419010-74419029 Msa0472010:intron 25.0%
!!! AGATTTTGGAAGCAATTATA+AGG + chr3_3:74419024-74419043 Msa0472010:intron 25.0%
! TAGGTCATTATACAAGTATA+TGG + chr3_3:74419127-74419146 Msa0472010:intron 25.0%
!! ACAAAAATTTTGTATGCTAG+AGG - chr3_3:74419231-74419250 None:intergenic 25.0%
! GAATTAGAAAAAGAACTTTC+TGG - chr3_3:74419634-74419653 None:intergenic 25.0%
!! TCCTTGATTTTATATCAAGA+AGG + chr3_3:74420071-74420090 Msa0472010:intron 25.0%
!! CCTTGATTTTATATCAAGAA+GGG + chr3_3:74420072-74420091 Msa0472010:intron 25.0%
!! TCTGGATTTATCTGAAATTA+GGG - chr3_3:74420420-74420439 None:intergenic 25.0%
! TATGAATTATATGGATCTTG+TGG + chr3_3:74420762-74420781 Msa0472010:intron 25.0%
! TAAATTAGTGAGATGCATAT+AGG - chr3_3:74421035-74421054 None:intergenic 25.0%
! GTTTAAATGAACTTACATTG+AGG + chr3_3:74421087-74421106 Msa0472010:intron 25.0%
!!! ACAATTTTTCTGAAATGCAT+TGG + chr3_3:74421123-74421142 Msa0472010:intron 25.0%
! TAAATCATCTTGTGTTTGAT+TGG + chr3_3:74421214-74421233 Msa0472010:intron 25.0%
! ATTGATGTGAATGGAATAAT+AGG + chr3_3:74421332-74421351 Msa0472010:intron 25.0%
!! AGTTATATTTTCTCAATGTG+GGG + chr3_3:74421635-74421654 Msa0472010:intron 25.0%
!!! ATTGCATTATTTTGATGCAA+TGG - chr3_3:74421781-74421800 None:intergenic 25.0%
! ACAAATTTATTTCATCCCAA+GGG - chr3_3:74422129-74422148 None:intergenic 25.0%
! AAATAAATTTGTGTACATCG+AGG + chr3_3:74422137-74422156 Msa0472010:intron 25.0%
! AATAAATTTGTGTACATCGA+GGG + chr3_3:74422138-74422157 Msa0472010:intron 25.0%
! ACTCGAAATTAATAAGTGAT+GGG + chr3_3:74422177-74422196 Msa0472010:intron 25.0%
! AATGAATTTCATATCCCTTA+TGG + chr3_3:74422381-74422400 Msa0472010:intron 25.0%
! ATGAATTTCATATCCCTTAT+GGG + chr3_3:74422382-74422401 Msa0472010:intron 25.0%
! TTATATGAACCAAAATCACT+TGG - chr3_3:74422604-74422623 None:intergenic 25.0%
! GAATTAGAAAAAGAACTTCT+TGG - chr3_3:74422727-74422746 None:intergenic 25.0%
!! TCCTTGATTTTATATCAAGA+AGG + chr3_3:74420071-74420090 Msa0472010:intron 25.0%
!! CCTTGATTTTATATCAAGAA+GGG + chr3_3:74420072-74420091 Msa0472010:intron 25.0%
!! ATTATTAGTGTTTTCAACCT+TGG + chr3_3:74423510-74423529 Msa0472010:intron 25.0%
! GATCAATTGAAGATGAAATA+AGG + chr3_3:74423535-74423554 Msa0472010:intron 25.0%
!!! TTTTAAGTCAATGTGAACAT+TGG - chr3_3:74423655-74423674 None:intergenic 25.0%
! ACTACTAGTGTTATTGTTGT+TGG - chr3_3:74414803-74414822 None:intergenic 30.0%
AATAACACTAGTAGTGTTGT+TGG + chr3_3:74414808-74414827 Msa0472010:CDS 30.0%
! ATAACACTAGTAGTGTTGTT+GGG + chr3_3:74414809-74414828 Msa0472010:CDS 30.0%
AAAGACATGTTGTATGTTGT+GGG - chr3_3:74414970-74414989 None:intergenic 30.0%
AAAAGACATGTTGTATGTTG+TGG - chr3_3:74414971-74414990 None:intergenic 30.0%
! ACAACATACAACATGTCTTT+TGG + chr3_3:74414970-74414989 Msa0472010:CDS 30.0%
! CAACATACAACATGTCTTTT+GGG + chr3_3:74414971-74414990 Msa0472010:CDS 30.0%
! AACATACAACATGTCTTTTG+GGG + chr3_3:74414972-74414991 Msa0472010:CDS 30.0%
GCTAATGCTATCATTGATAA+TGG + chr3_3:74415015-74415034 Msa0472010:CDS 30.0%
!! AATGCTATCATTGATAATGG+CGG + chr3_3:74415018-74415037 Msa0472010:CDS 30.0%
ATACATGAAAGAAGATGAGA+AGG - chr3_3:74415344-74415363 None:intergenic 30.0%
TTAAGGAAGAAGAGAGAAAA+GGG - chr3_3:74415379-74415398 None:intergenic 30.0%
ATTAAGGAAGAAGAGAGAAA+AGG - chr3_3:74415380-74415399 None:intergenic 30.0%
!! CACATTGATTCAATGACAAA+AGG - chr3_3:74415520-74415539 None:intergenic 30.0%
TTTGTCATTGAATCAATGTG+TGG + chr3_3:74415520-74415539 Msa0472010:intron 30.0%
AAAGCAACACATGATGAAAA+AGG - chr3_3:74415546-74415565 None:intergenic 30.0%
GAAGAACAGATGGTAAAAAA+TGG + chr3_3:74415678-74415697 Msa0472010:CDS 30.0%
!! CTTTCACAGTACTTGTTATT+AGG - chr3_3:74415725-74415744 None:intergenic 30.0%
! GATCCATATTTTCTTGTAGT+TGG - chr3_3:74415905-74415924 None:intergenic 30.0%
GAAAATGAAGATTGGAGATA+AGG - chr3_3:74415962-74415981 None:intergenic 30.0%
ATACAGATATAAACTCACCT+TGG - chr3_3:74416022-74416041 None:intergenic 30.0%
! TGATTTTGTTGAATCCCTTA+AGG + chr3_3:74416110-74416129 Msa0472010:intron 30.0%
ACAAAGACATAGTACATGTT+TGG - chr3_3:74416197-74416216 None:intergenic 30.0%
TTGGTGAATTGAATGAAAAG+GGG + chr3_3:74416382-74416401 Msa0472010:intron 30.0%
ATTATGATAGGAACTTCCAT+TGG - chr3_3:74416500-74416519 None:intergenic 30.0%
! GGATTCAGTGTTATTATGAT+AGG - chr3_3:74416512-74416531 None:intergenic 30.0%
TGGAAATGAATTCAGATACT+GGG - chr3_3:74416533-74416552 None:intergenic 30.0%
AGTTCAGAACTGTTATATAG+TGG - chr3_3:74416553-74416572 None:intergenic 30.0%
TCAATGAAACTAAAACCTCT+TGG - chr3_3:74416652-74416671 None:intergenic 30.0%
!!! GTTTTAGTTTCATTGATGCT+TGG + chr3_3:74416656-74416675 Msa0472010:CDS 30.0%
TGATAGATCAAGTGATGAAA+GGG - chr3_3:74416764-74416783 None:intergenic 30.0%
TTGATAGATCAAGTGATGAA+AGG - chr3_3:74416765-74416784 None:intergenic 30.0%
TTCATCACTTGATCTATCAA+TGG + chr3_3:74416765-74416784 Msa0472010:CDS 30.0%
TCATCACTTGATCTATCAAT+GGG + chr3_3:74416766-74416785 Msa0472010:CDS 30.0%
CTAAAATAGCATTCTCAAGT+TGG + chr3_3:74416854-74416873 Msa0472010:CDS 30.0%
TTATTATGCAAAACACCAGA+TGG - chr3_3:74417057-74417076 None:intergenic 30.0%
ATTGAAACTTAAGAAGCAGA+AGG - chr3_3:74417208-74417227 None:intergenic 30.0%
TCACTAAACAATAGGCTATA+AGG - chr3_3:74417304-74417323 None:intergenic 30.0%
TTCACATAAAACAGAAACAC+TGG - chr3_3:74417383-74417402 None:intergenic 30.0%
ACAGGAAAATCAAAATGAGT+AGG - chr3_3:74417669-74417688 None:intergenic 30.0%
! TACTTCAATTTTCACCCATA+TGG - chr3_3:74417756-74417775 None:intergenic 30.0%
ATAGTACATCAAAATCAGCT+AGG - chr3_3:74417893-74417912 None:intergenic 30.0%
GAAATATTATCTTGTCTCCT+TGG + chr3_3:74418129-74418148 Msa0472010:intron 30.0%
!!! GTATTTTGCTTTTCTGAAGT+AGG + chr3_3:74418391-74418410 Msa0472010:intron 30.0%
GATAAATAAGCTTAGAGTGA+TGG - chr3_3:74418682-74418701 None:intergenic 30.0%
! GAAAGCATGAATTATATCAC+AGG - chr3_3:74418774-74418793 None:intergenic 30.0%
CATAAACCAATTAAAGTCTG+AGG - chr3_3:74419057-74419076 None:intergenic 30.0%
! TAACATACACCAAGTGATTT+TGG + chr3_3:74419499-74419518 Msa0472010:intron 30.0%
CTATATGAACCAAAATCACT+TGG - chr3_3:74419511-74419530 None:intergenic 30.0%
TACTTAACACATAGTGAAGT+TGG - chr3_3:74419543-74419562 None:intergenic 30.0%
!!! AAGTATTATCATTTTAGGGC+TGG + chr3_3:74419558-74419577 Msa0472010:intron 30.0%
TTCAAGAGATATCAATGGAA+TGG - chr3_3:74419849-74419868 None:intergenic 30.0%
CCCTTCTTGATATAAAATCA+AGG - chr3_3:74420075-74420094 None:intergenic 30.0%
TCGTTCTACAAATGATGATT+CGG + chr3_3:74420186-74420205 Msa0472010:intron 30.0%
GATGCTGATAAATTTGTAGT+CGG + chr3_3:74420234-74420253 Msa0472010:intron 30.0%
! TCTTAAGGATTTTCGTATCA+TGG + chr3_3:74420386-74420405 Msa0472010:intron 30.0%
! CTCTGGATTTATCTGAAATT+AGG - chr3_3:74420421-74420440 None:intergenic 30.0%
TTGAGACATTACACAAGATA+TGG + chr3_3:74420517-74420536 Msa0472010:intron 30.0%
ATAATCCAAGAAATAGCCAT+CGG - chr3_3:74420635-74420654 None:intergenic 30.0%
TAAATGTTGAGTTTCTGTGT+TGG + chr3_3:74420694-74420713 Msa0472010:intron 30.0%
AAATGTTGAGTTTCTGTGTT+GGG + chr3_3:74420695-74420714 Msa0472010:intron 30.0%
TATGTGCACGTTATTTGATA+AGG + chr3_3:74420902-74420921 Msa0472010:intron 30.0%
ATGTGCACGTTATTTGATAA+GGG + chr3_3:74420903-74420922 Msa0472010:intron 30.0%
TGCATATAGGTAGAATACAA+AGG - chr3_3:74421022-74421041 None:intergenic 30.0%
GACATCTAAATTGATGTGAA+TGG + chr3_3:74421323-74421342 Msa0472010:intron 30.0%
TGGAATAATAGGATCAAGTA+CGG + chr3_3:74421343-74421362 Msa0472010:intron 30.0%
! GTTATATTTTCTCAATGTGG+GGG + chr3_3:74421636-74421655 Msa0472010:intron 30.0%
CAAATTTATTTCATCCCAAG+GGG - chr3_3:74422128-74422147 None:intergenic 30.0%
CACAAATTTATTTCATCCCA+AGG - chr3_3:74422130-74422149 None:intergenic 30.0%
ATAAATTTGTGTACATCGAG+GGG + chr3_3:74422139-74422158 Msa0472010:intron 30.0%
CATCACTTATTAATTTCGAG+TGG - chr3_3:74422178-74422197 None:intergenic 30.0%
CACTCGAAATTAATAAGTGA+TGG + chr3_3:74422176-74422195 Msa0472010:intron 30.0%
! TAACATACACCAAGTGATTT+TGG + chr3_3:74419499-74419518 Msa0472010:intron 30.0%
!!! AAGTATTATCATTTTAGGGC+TGG + chr3_3:74419558-74419577 Msa0472010:intron 30.0%
TTCAAGAGATATCAATGGAA+TGG - chr3_3:74419849-74419868 None:intergenic 30.0%
TATTCTGTACGTAAATCAGT+AGG - chr3_3:74423015-74423034 None:intergenic 30.0%
! ACTGATTTACGTACAGAATA+TGG + chr3_3:74423015-74423034 Msa0472010:intron 30.0%
CCCTTCTTGATATAAAATCA+AGG - chr3_3:74420075-74420094 None:intergenic 30.0%
TCGTTCTACAAATGATGATT+CGG + chr3_3:74420186-74420205 Msa0472010:intron 30.0%
GATGCTGATAAATTTGTAGT+CGG + chr3_3:74420234-74420253 Msa0472010:intron 30.0%
CAATTGAAGATGAAATAAGG+TGG + chr3_3:74423538-74423557 Msa0472010:intron 30.0%
CTCTATATACAAACTGTCTA+AGG + chr3_3:74423759-74423778 Msa0472010:CDS 30.0%
! TCAAAGGCTTTATGTATCAA+AGG + chr3_3:74423853-74423872 Msa0472010:CDS 30.0%
GATTATCAAAGAATGAACGG+TGG - chr3_3:74414900-74414919 None:intergenic 35.0%
! ACATACAACATGTCTTTTGG+GGG + chr3_3:74414973-74414992 Msa0472010:CDS 35.0%
GAAGCAGAAATGTTGTGAAA+AGG - chr3_3:74415063-74415082 None:intergenic 35.0%
CTGAACAATACTTGTGTTTG+TGG + chr3_3:74415193-74415212 Msa0472010:intron 35.0%
AACAATACTTGTGTTTGTGG+TGG + chr3_3:74415196-74415215 Msa0472010:intron 35.0%
!!! TATCCTTGTTTTTGAAGCAG+TGG + chr3_3:74415592-74415611 Msa0472010:intron 35.0%
! TCAATCTGAGGCTATCAAAT+AGG + chr3_3:74415624-74415643 Msa0472010:CDS 35.0%
TGTGAAAGACATATGCATAG+AGG + chr3_3:74415737-74415756 Msa0472010:CDS 35.0%
TTATTTGTGTGAAGTTCCAC+AGG - chr3_3:74415782-74415801 None:intergenic 35.0%
! TTTCTTGTAGTTGGATTAGG+AGG - chr3_3:74415896-74415915 None:intergenic 35.0%
AGATTGGAGATAAGGATGAA+GGG - chr3_3:74415954-74415973 None:intergenic 35.0%
AAGATTGGAGATAAGGATGA+AGG - chr3_3:74415955-74415974 None:intergenic 35.0%
TTTGCATAATAGCAGCTTTG+AGG + chr3_3:74415982-74416001 Msa0472010:CDS 35.0%
GGGATTCAACAAAATCACAA+TGG - chr3_3:74416107-74416126 None:intergenic 35.0%
TTAGAAGATCCAAGCCTTAA+GGG - chr3_3:74416127-74416146 None:intergenic 35.0%
!! AGTTTGTTGTTATGCATCAG+AGG - chr3_3:74416469-74416488 None:intergenic 35.0%
CTGATGCATAACAACAAACT+TGG + chr3_3:74416469-74416488 Msa0472010:CDS 35.0%
AACAAACTTGGAATGACCAA+TGG + chr3_3:74416481-74416500 Msa0472010:CDS 35.0%
GTGGAAATGAATTCAGATAC+TGG - chr3_3:74416534-74416553 None:intergenic 35.0%
GGATTAAGTAAGAGAGGAAA+GGG - chr3_3:74416592-74416611 None:intergenic 35.0%
AGTTTGCATTGGAACAACAA+GGG - chr3_3:74416614-74416633 None:intergenic 35.0%
!! AGAATTTGTTGCATCACTGA+TGG - chr3_3:74416959-74416978 None:intergenic 35.0%
! GCTTCATTTTCTGATAGTAG+TGG + chr3_3:74417084-74417103 Msa0472010:CDS 35.0%
TCCAAATGTTGCATCATCAA+GGG + chr3_3:74417116-74417135 Msa0472010:CDS 35.0%
TAGTATTAGTACACTCTCAC+AGG - chr3_3:74417456-74417475 None:intergenic 35.0%
!! CAATAGTGTTGTTTGTTGTG+TGG + chr3_3:74417496-74417515 Msa0472010:intron 35.0%
AACTTTGACTATGTCAACCA+TGG + chr3_3:74417560-74417579 Msa0472010:intron 35.0%
! AGAGAACAAAATAGTGGAAC+AGG - chr3_3:74417587-74417606 None:intergenic 35.0%
TAACATAGCTCGTACTTTGT+TGG + chr3_3:74417865-74417884 Msa0472010:intron 35.0%
TTTGTTAATGTGTCTTGCCA+AGG - chr3_3:74418149-74418168 None:intergenic 35.0%
! CAACAAAAAAGAGTGCATTG+TGG - chr3_3:74418321-74418340 None:intergenic 35.0%
AACGACAGTTAACTCATTGT+AGG + chr3_3:74418347-74418366 Msa0472010:intron 35.0%
!! CATGAACTTGCTATTGGTAT+TGG - chr3_3:74418498-74418517 None:intergenic 35.0%
!! ATGTAGCATGAACTTGCTAT+TGG - chr3_3:74418504-74418523 None:intergenic 35.0%
AAGAATTTCTTTGTGAACCG+TGG - chr3_3:74418648-74418667 None:intergenic 35.0%
TGCCTGCATAAATATGACTA+TGG + chr3_3:74418876-74418895 Msa0472010:intron 35.0%
GACCATAGTCATATTTATGC+AGG - chr3_3:74418881-74418900 None:intergenic 35.0%
TTAGCACCTCAGACTTTAAT+TGG + chr3_3:74419048-74419067 Msa0472010:intron 35.0%
TTGTAAGCTATCTAGCATCA+TGG - chr3_3:74419177-74419196 None:intergenic 35.0%
GAGACAAAATGTGAGAGTTT+AGG - chr3_3:74419209-74419228 None:intergenic 35.0%
!! AATCACTTGGTGTATGTTAG+CGG - chr3_3:74419498-74419517 None:intergenic 35.0%
AAGAGATATCAATGGAATGG+AGG - chr3_3:74419846-74419865 None:intergenic 35.0%
GCACATTCAAGAGATATCAA+TGG - chr3_3:74419854-74419873 None:intergenic 35.0%
! CTCTTGAATGTGCTATTATG+TGG + chr3_3:74419861-74419880 Msa0472010:intron 35.0%
! CCAGAATTGTGTTATTGTGA+GGG - chr3_3:74420011-74420030 None:intergenic 35.0%
CCTCACAATAACACAATTCT+GGG + chr3_3:74420009-74420028 Msa0472010:intron 35.0%
AATTACGCGGAAAATCCTTA+AGG + chr3_3:74420123-74420142 Msa0472010:intron 35.0%
GATCATGCTTGTAGGAATTA+AGG + chr3_3:74420484-74420503 Msa0472010:intron 35.0%
! GTGTGGCATTTTGTGTATTA+AGG + chr3_3:74420587-74420606 Msa0472010:intron 35.0%
!!! TCTTGTTTTCCTTTAACCGA+TGG + chr3_3:74420616-74420635 Msa0472010:intron 35.0%
! AAGAAATAGCCATCGGTTAA+AGG - chr3_3:74420628-74420647 None:intergenic 35.0%
!! TTTAACCGATGGCTATTTCT+TGG + chr3_3:74420627-74420646 Msa0472010:intron 35.0%
TGTGCACGTTATTTGATAAG+GGG + chr3_3:74420904-74420923 Msa0472010:intron 35.0%
ATAGGTAGAATACAAAGGCA+TGG - chr3_3:74421017-74421036 None:intergenic 35.0%
!!! CTATGCCGAGACTTTTTTAA+AGG + chr3_3:74421293-74421312 Msa0472010:intron 35.0%
AGACTTTATCTAAGTAGACC+TGG + chr3_3:74421696-74421715 Msa0472010:intron 35.0%
AGACCTGGTGATTTATATCA+AGG + chr3_3:74421711-74421730 Msa0472010:intron 35.0%
CTTCCTTGATATAAATCACC+AGG - chr3_3:74421717-74421736 None:intergenic 35.0%
TCCCATGAATAAGGTTCATA+TGG + chr3_3:74422223-74422242 Msa0472010:intron 35.0%
CCCATATGAACCTTATTCAT+GGG - chr3_3:74422227-74422246 None:intergenic 35.0%
CCCATGAATAAGGTTCATAT+GGG + chr3_3:74422224-74422243 Msa0472010:intron 35.0%
ACCCATATGAACCTTATTCA+TGG - chr3_3:74422228-74422247 None:intergenic 35.0%
AATTTCATATCCCTTATGGG+TGG + chr3_3:74422385-74422404 Msa0472010:intron 35.0%
TAATCATACACCACCCATAA+GGG - chr3_3:74422398-74422417 None:intergenic 35.0%
!! AATCACTTGGTGTATGTTAG+CGG - chr3_3:74419498-74419517 None:intergenic 35.0%
TACTTAACACACAGTGAAGT+TGG - chr3_3:74422636-74422655 None:intergenic 35.0%
AAGAGATATCAATGGAATGG+AGG - chr3_3:74419846-74419865 None:intergenic 35.0%
GCACATTCAAGAGATATCAA+TGG - chr3_3:74419854-74419873 None:intergenic 35.0%
! CTCTTGAATGTGCTATTATG+TGG + chr3_3:74419861-74419880 Msa0472010:intron 35.0%
GATTTACGTACAGAATATGG+AGG + chr3_3:74423018-74423037 Msa0472010:intron 35.0%
! CCAGAATTGTGTTATTGTGA+GGG - chr3_3:74420011-74420030 None:intergenic 35.0%
CCTCACAATAACACAATTCT+GGG + chr3_3:74420009-74420028 Msa0472010:intron 35.0%
AATTACGCGGAAAATCCTTA+AGG + chr3_3:74420123-74420142 Msa0472010:intron 35.0%
! ATTAGTGTTTTCAACCTTGG+TGG + chr3_3:74423513-74423532 Msa0472010:intron 35.0%
ACCTTAACTGAAAGTAGCTA+GGG - chr3_3:74423617-74423636 None:intergenic 35.0%
TACCTTAACTGAAAGTAGCT+AGG - chr3_3:74423618-74423637 None:intergenic 35.0%
! GTTGGAATGAATTCTTTTGC+AGG + chr3_3:74423726-74423745 Msa0472010:intron 35.0%
GTTTGCATAATTTCTGTGAG+CGG + chr3_3:74423799-74423818 Msa0472010:CDS 35.0%
TCTGTATCAAATTCTGTGAG+CGG + chr3_3:74423823-74423842 Msa0472010:CDS 35.0%
! CTAACCTTTAAGGGTTGTGT+TGG - chr3_3:74415085-74415104 None:intergenic 40.0%
CATTGAGCAATTGTGAAAGG+AGG - chr3_3:74415263-74415282 None:intergenic 40.0%
CTCCTTTCACAATTGCTCAA+TGG + chr3_3:74415261-74415280 Msa0472010:CDS 40.0%
CTCCATTGAGCAATTGTGAA+AGG - chr3_3:74415266-74415285 None:intergenic 40.0%
GAAAGAAGATGAGAAGGAAC+AGG - chr3_3:74415338-74415357 None:intergenic 40.0%
CATCCACTGCTTCAAAAACA+AGG - chr3_3:74415598-74415617 None:intergenic 40.0%
!!! CTTGTTTTTGAAGCAGTGGA+TGG + chr3_3:74415596-74415615 Msa0472010:intron 40.0%
TAGGAACAATACTGATCCAG+AGG + chr3_3:74415643-74415662 Msa0472010:CDS 40.0%
! TTCACTGCCTGATTTTACTG+TGG + chr3_3:74415865-74415884 Msa0472010:CDS 40.0%
GATTGGAGATAAGGATGAAG+GGG - chr3_3:74415953-74415972 None:intergenic 40.0%
AGGCTTCAAATAAGCAACCA+AGG + chr3_3:74416002-74416021 Msa0472010:CDS 40.0%
TTGTTGAATCCCTTAAGGCT+TGG + chr3_3:74416115-74416134 Msa0472010:intron 40.0%
CTTAGAAGATCCAAGCCTTA+AGG - chr3_3:74416128-74416147 None:intergenic 40.0%
GAATTGAATGAAAAGGGGCT+TGG + chr3_3:74416387-74416406 Msa0472010:intron 40.0%
AATGGAGATCCAATTTCCCT+TGG + chr3_3:74416421-74416440 Msa0472010:CDS 40.0%
!! TTAGAAGCACCAAGGGAAAT+TGG - chr3_3:74416433-74416452 None:intergenic 40.0%
!! TCCTGAATTAGAAGCACCAA+GGG - chr3_3:74416440-74416459 None:intergenic 40.0%
!! ATCCTGAATTAGAAGCACCA+AGG - chr3_3:74416441-74416460 None:intergenic 40.0%
! TTGGTGCTTCTAATTCAGGA+TGG + chr3_3:74416440-74416459 Msa0472010:CDS 40.0%
GGGATTAAGTAAGAGAGGAA+AGG - chr3_3:74416593-74416612 None:intergenic 40.0%
ACAAGGGGATTAAGTAAGAG+AGG - chr3_3:74416598-74416617 None:intergenic 40.0%
GTTTGCATTGGAACAACAAG+GGG - chr3_3:74416613-74416632 None:intergenic 40.0%
GAGTTTGCATTGGAACAACA+AGG - chr3_3:74416615-74416634 None:intergenic 40.0%
TCAGATTGGAGAGTTTGCAT+TGG - chr3_3:74416625-74416644 None:intergenic 40.0%
AACCTCTTGGTTTCTCAGAT+TGG - chr3_3:74416639-74416658 None:intergenic 40.0%
AACTGATGCAGAACCATTGT+TGG - chr3_3:74416731-74416750 None:intergenic 40.0%
! AACAATGGTTCTGCATCAGT+TGG + chr3_3:74416730-74416749 Msa0472010:CDS 40.0%
TCACTTGATCTATCAATGGG+AGG + chr3_3:74416769-74416788 Msa0472010:CDS 40.0%
CTGATGGAAGTAACATTGCT+TGG - chr3_3:74416943-74416962 None:intergenic 40.0%
ACAAATCGTGTCGAATCCAT+TGG + chr3_3:74417003-74417022 Msa0472010:CDS 40.0%
GTCCAAATGTTGCATCATCA+AGG + chr3_3:74417115-74417134 Msa0472010:CDS 40.0%
CTGATCCAATTGTTGTCTGT+CGG + chr3_3:74417521-74417540 Msa0472010:intron 40.0%
CTTATCCGACAGACAACAAT+TGG - chr3_3:74417529-74417548 None:intergenic 40.0%
! AAAATAGTGGAACAGGTCCA+TGG - chr3_3:74417580-74417599 None:intergenic 40.0%
GGGGATAGAGAACAAAATAG+TGG - chr3_3:74417593-74417612 None:intergenic 40.0%
AACCACACACACATGTTTGA+TGG - chr3_3:74418015-74418034 None:intergenic 40.0%
ATCAAACATGTGTGTGTGGT+TGG + chr3_3:74418014-74418033 Msa0472010:intron 40.0%
TCAAACATGTGTGTGTGGTT+GGG + chr3_3:74418015-74418034 Msa0472010:intron 40.0%
TTCTTTATCTTGAAGTCGGG+AGG + chr3_3:74418187-74418206 Msa0472010:intron 40.0%
TTGCTTATTGGTCGGATGAA+TGG - chr3_3:74418298-74418317 None:intergenic 40.0%
CATTGTGGTTGCTTATTGGT+CGG - chr3_3:74418306-74418325 None:intergenic 40.0%
AGTGCATTGTGGTTGCTTAT+TGG - chr3_3:74418310-74418329 None:intergenic 40.0%
!! GAACTTGCTATTGGTATTGG+AGG - chr3_3:74418495-74418514 None:intergenic 40.0%
! AGCTTAGAGTGATGGTGAAT+CGG - chr3_3:74418674-74418693 None:intergenic 40.0%
TCGAAAGTGACAAGTGGTTT+AGG + chr3_3:74419108-74419127 Msa0472010:intron 40.0%
! TGATTAGTTACCGAAACCGT+AGG + chr3_3:74419151-74419170 Msa0472010:intron 40.0%
GAGCACTCATGAAATAATCC+AGG + chr3_3:74419401-74419420 Msa0472010:intron 40.0%
GTAGATGTGATGCATCAAAC+TGG - chr3_3:74419602-74419621 None:intergenic 40.0%
TATGTGGCTTCTTTCTTGCT+TGG + chr3_3:74419877-74419896 Msa0472010:intron 40.0%
GATGAAGCACGTACAGAATA+TGG + chr3_3:74419924-74419943 Msa0472010:intron 40.0%
CCCTCACAATAACACAATTC+TGG + chr3_3:74420008-74420027 Msa0472010:intron 40.0%
! CCCAGAATTGTGTTATTGTG+AGG - chr3_3:74420012-74420031 None:intergenic 40.0%
AAGAAGGGTCTGTTAAATCC+TGG + chr3_3:74420087-74420106 Msa0472010:intron 40.0%
TAATTATACGCTAATCCGCC+AGG - chr3_3:74420108-74420127 None:intergenic 40.0%
!! CGGATTAGCGTATAATTACG+CGG + chr3_3:74420110-74420129 Msa0472010:intron 40.0%
!! ACAAATGATGATTCGGTAGC+AGG + chr3_3:74420193-74420212 Msa0472010:intron 40.0%
ATTCGGTAGCAGGTTCAATT+TGG + chr3_3:74420203-74420222 Msa0472010:intron 40.0%
! CGACACATCAAAATTGACTC+TGG - chr3_3:74420438-74420457 None:intergenic 40.0%
AATGAAGGGATCATGCTTGT+AGG + chr3_3:74420476-74420495 Msa0472010:intron 40.0%
AGAAAACATAACCACCGCTT+GGG + chr3_3:74420545-74420564 Msa0472010:intron 40.0%
TGGATCTTGTGGACATCAAT+CGG + chr3_3:74420773-74420792 Msa0472010:intron 40.0%
! TTGTCGATTAGACCTCAATG+TGG + chr3_3:74421660-74421679 Msa0472010:intron 40.0%
! TGTCGATTAGACCTCAATGT+GGG + chr3_3:74421661-74421680 Msa0472010:intron 40.0%
AAGCGACATCACTATCAATG+TGG - chr3_3:74421936-74421955 None:intergenic 40.0%
GATCTCCAATCACAAAGGTT+GGG - chr3_3:74422205-74422224 None:intergenic 40.0%
GATTGGAGATCCCATGAATA+AGG + chr3_3:74422214-74422233 Msa0472010:intron 40.0%
CTAGACACTGCATTATTGAG+AGG + chr3_3:74422339-74422358 Msa0472010:intron 40.0%
CTAATCATACACCACCCATA+AGG - chr3_3:74422399-74422418 None:intergenic 40.0%
GAGCACTCATGAAATAATCC+AGG + chr3_3:74419401-74419420 Msa0472010:intron 40.0%
!! AATTCTTGTTGTTGGCACTG+TGG - chr3_3:74422543-74422562 None:intergenic 40.0%
AGTGCCAACAACAAGAATTG+TGG + chr3_3:74422544-74422563 Msa0472010:intron 40.0%
GTGCCAACAACAAGAATTGT+GGG + chr3_3:74422545-74422564 Msa0472010:intron 40.0%
TGCCAACAACAAGAATTGTG+GGG + chr3_3:74422546-74422565 Msa0472010:intron 40.0%
CTAGATGTGATGCATCAAAC+TGG - chr3_3:74422695-74422714 None:intergenic 40.0%
CAGTTTGATGCATCACATCT+AGG + chr3_3:74419600-74419619 Msa0472010:intron 40.0%
ATGTGGCTTCTTTCTTGCTT+TGG + chr3_3:74419878-74419897 Msa0472010:intron 40.0%
CCCTCACAATAACACAATTC+TGG + chr3_3:74420008-74420027 Msa0472010:intron 40.0%
! CCCAGAATTGTGTTATTGTG+AGG - chr3_3:74420012-74420031 None:intergenic 40.0%
AAGAAGGGTCTGTTAAATCC+TGG + chr3_3:74420087-74420106 Msa0472010:intron 40.0%
AGAAGGGTCTGTTAAATCCT+GGG + chr3_3:74420088-74420107 Msa0472010:intron 40.0%
TAATTATACGCTAATCCCCC+AGG - chr3_3:74423199-74423218 None:intergenic 40.0%
! GGGATTAGCGTATAATTACG+CGG + chr3_3:74423201-74423220 Msa0472010:intron 40.0%
!! ACAAATGATGATTCGGTAGC+AGG + chr3_3:74420193-74420212 Msa0472010:intron 40.0%
CATCTTCAATTGATCCACCA+AGG - chr3_3:74423530-74423549 None:intergenic 40.0%
CCAAACAAAGGTCAGTTTCA+AGG - chr3_3:74423584-74423603 None:intergenic 40.0%
CCTTGAAACTGACCTTTGTT+TGG + chr3_3:74423581-74423600 Msa0472010:intron 40.0%
! TGAAACTGACCTTTGTTTGG+AGG + chr3_3:74423584-74423603 Msa0472010:intron 40.0%
! GAAACTGACCTTTGTTTGGA+GGG + chr3_3:74423585-74423604 Msa0472010:intron 40.0%
! TCCCTAGCTACTTTCAGTTA+AGG + chr3_3:74423613-74423632 Msa0472010:intron 40.0%
! AAGGACCATTTGGAGTATGA+AGG - chr3_3:74423883-74423902 None:intergenic 40.0%
TGAGTTTCGCGTTCAAGACA+AGG + chr3_3:74414762-74414781 Msa0472010:CDS 45.0%
! CACTAGTAGTGTTGTTGGGT+CGG + chr3_3:74414813-74414832 Msa0472010:CDS 45.0%
GCTGTTGATGCTGATGGTTA+TGG + chr3_3:74414943-74414962 Msa0472010:CDS 45.0%
GCTTCCAACACAACCCTTAA+AGG + chr3_3:74415078-74415097 Msa0472010:CDS 45.0%
!!! GTTTTTGAAGCAGTGGATGG+TGG + chr3_3:74415599-74415618 Msa0472010:intron 45.0%
! TGGATGGTGGTTTCAATCTG+AGG + chr3_3:74415612-74415631 Msa0472010:CDS 45.0%
AACAATACTGATCCAGAGGC+TGG + chr3_3:74415647-74415666 Msa0472010:CDS 45.0%
TTCCACAGGCTTTCTTGAAC+GGG - chr3_3:74415768-74415787 None:intergenic 45.0%
GTTCCACAGGCTTTCTTGAA+CGG - chr3_3:74415769-74415788 None:intergenic 45.0%
GGAACAGCCACAGTAAAATC+AGG - chr3_3:74415875-74415894 None:intergenic 45.0%
!! TCCCTTGGTGCTTCTAATTC+AGG + chr3_3:74416436-74416455 Msa0472010:CDS 45.0%
CTCCAATCTGAGAAACCAAG+AGG + chr3_3:74416634-74416653 Msa0472010:CDS 45.0%
TTGGTCTAATGCAGAGACAG+TGG + chr3_3:74416675-74416694 Msa0472010:CDS 45.0%
TGATGCAGAACCATTGTTGG+AGG - chr3_3:74416728-74416747 None:intergenic 45.0%
GTCCACTAGCTGAAGTTCTA+AGG + chr3_3:74416917-74416936 Msa0472010:CDS 45.0%
TCGAATCCATTGGCACTTCA+GGG + chr3_3:74417013-74417032 Msa0472010:CDS 45.0%
GGAATGGTATCATCTCCATC+TGG + chr3_3:74417039-74417058 Msa0472010:CDS 45.0%
!! GCCCTTGATGATGCAACATT+TGG - chr3_3:74417120-74417139 None:intergenic 45.0%
CGACAGACAACAATTGGATC+AGG - chr3_3:74417523-74417542 None:intergenic 45.0%
! CACACACATGTTTGATGGCT+AGG - chr3_3:74418010-74418029 None:intergenic 45.0%
AGCCATCAAACATGTGTGTG+TGG + chr3_3:74418010-74418029 Msa0472010:intron 45.0%
CAAACATGTGTGTGTGGTTG+GGG + chr3_3:74418016-74418035 Msa0472010:intron 45.0%
TTATCTTGAAGTCGGGAGGA+AGG + chr3_3:74418191-74418210 Msa0472010:intron 45.0%
ACACTAACCAGCACTTGCTT+GGG - chr3_3:74418373-74418392 None:intergenic 45.0%
TACACTAACCAGCACTTGCT+TGG - chr3_3:74418374-74418393 None:intergenic 45.0%
! TTAGAGTGATGGTGAATCGG+TGG - chr3_3:74418671-74418690 None:intergenic 45.0%
TCGTTGCTGTATGACACGAT+AGG + chr3_3:74418899-74418918 Msa0472010:intron 45.0%
GCTGTATGACACGATAGGTT+TGG + chr3_3:74418904-74418923 Msa0472010:intron 45.0%
GTATGGCAAGCAGTTCTTGA+TGG + chr3_3:74418984-74419003 Msa0472010:intron 45.0%
GTCACTTCGAAAGTGACAAG+TGG + chr3_3:74419102-74419121 Msa0472010:intron 45.0%
CTATCTAGCATCATGGCCTA+CGG - chr3_3:74419170-74419189 None:intergenic 45.0%
TCACCTATGTGAGTGTCAAG+TGG + chr3_3:74419345-74419364 Msa0472010:intron 45.0%
CACCTATGTGAGTGTCAAGT+GGG + chr3_3:74419346-74419365 Msa0472010:intron 45.0%
ACCTATGTGAGTGTCAAGTG+GGG + chr3_3:74419347-74419366 Msa0472010:intron 45.0%
TCGCCAAGATCTCATACAAG+CGG - chr3_3:74419373-74419392 None:intergenic 45.0%
TGAGATCTTGGCGAAATCTC+TGG + chr3_3:74419379-74419398 Msa0472010:intron 45.0%
TCTGTACGTGCTTCATCAGT+AGG - chr3_3:74419921-74419940 None:intergenic 45.0%
GAAGCACGTACAGAATATGG+AGG + chr3_3:74419927-74419946 Msa0472010:intron 45.0%
AAGGGTCTGTTAAATCCTGG+CGG + chr3_3:74420090-74420109 Msa0472010:intron 45.0%
GAGAAAACATAACCACCGCT+TGG + chr3_3:74420544-74420563 Msa0472010:intron 45.0%
ATCTTGTGGACATCAATCGG+TGG + chr3_3:74420776-74420795 Msa0472010:intron 45.0%
GTCGATTAGACCTCAATGTG+GGG + chr3_3:74421662-74421681 Msa0472010:intron 45.0%
TCGATTAGACCTCAATGTGG+GGG + chr3_3:74421663-74421682 Msa0472010:intron 45.0%
AGCTACTAAACAAAGCCCCT+TGG + chr3_3:74422110-74422129 Msa0472010:intron 45.0%
GCTACTAAACAAAGCCCCTT+GGG + chr3_3:74422111-74422130 Msa0472010:intron 45.0%
TTTGTGTACATCGAGGGGAT+TGG + chr3_3:74422144-74422163 Msa0472010:intron 45.0%
TTGTGTACATCGAGGGGATT+GGG + chr3_3:74422145-74422164 Msa0472010:intron 45.0%
GGATCTCCAATCACAAAGGT+TGG - chr3_3:74422206-74422225 None:intergenic 45.0%
CATGGGATCTCCAATCACAA+AGG - chr3_3:74422210-74422229 None:intergenic 45.0%
TTGTTTCCGTCCCTTTCCTA+TGG + chr3_3:74422301-74422320 Msa0472010:intron 45.0%
CTCACACACACCATAGGAAA+GGG - chr3_3:74422314-74422333 None:intergenic 45.0%
TCTCACACACACCATAGGAA+AGG - chr3_3:74422315-74422334 None:intergenic 45.0%
TCACCTATGTGAGTGTCAAG+TGG + chr3_3:74419345-74419364 Msa0472010:intron 45.0%
CACCTATGTGAGTGTCAAGT+GGG + chr3_3:74419346-74419365 Msa0472010:intron 45.0%
ACCTATGTGAGTGTCAAGTG+GGG + chr3_3:74419347-74419366 Msa0472010:intron 45.0%
TCGCCAAGATCTCATACAAG+CGG - chr3_3:74419373-74419392 None:intergenic 45.0%
TGAGATCTTGGCGAAATCTC+TGG + chr3_3:74419379-74419398 Msa0472010:intron 45.0%
AAATAATCCAGGCACGTGCA+CGG + chr3_3:74422505-74422524 Msa0472010:intron 45.0%
GCCAACAACAAGAATTGTGG+GGG + chr3_3:74419454-74419473 Msa0472010:intron 45.0%
! ACCCCCACAATTCTTGTTGT+TGG - chr3_3:74419458-74419477 None:intergenic 45.0%
GAAGGGTCTGTTAAATCCTG+GGG + chr3_3:74420089-74420108 Msa0472010:intron 45.0%
AAGGGTCTGTTAAATCCTGG+GGG + chr3_3:74420090-74420109 Msa0472010:intron 45.0%
ATTCGGTAGCAGGTTCGATT+TGG + chr3_3:74423294-74423313 Msa0472010:intron 45.0%
!! ATAAGGTGGAAGTGCTAGCT+AGG + chr3_3:74423552-74423571 Msa0472010:intron 45.0%
TGTGAGCGGTTCTGTATCAA+AGG + chr3_3:74423813-74423832 Msa0472010:CDS 45.0%
GCTGTCCTTCATACTCCAAA+TGG + chr3_3:74423875-74423894 Msa0472010:CDS 45.0%
TGGTGTGTCAAAGGACCATT+TGG - chr3_3:74423893-74423912 None:intergenic 45.0%
AAATGGTCCTTTGACACACC+AGG + chr3_3:74423892-74423911 Msa0472010:CDS 45.0%
!!! AAAATTAATTAACTAATTTT+TGG - chr3_3:74422282-74422301 None:intergenic 5.0%
TCTGCTGCTGTTGATGCTGA+TGG + chr3_3:74414937-74414956 Msa0472010:CDS 50.0%
ATGGCGGCTTCAGTAGGAAT+AGG + chr3_3:74415233-74415252 Msa0472010:CDS 50.0%
TGGCGGCTTCAGTAGGAATA+GGG + chr3_3:74415234-74415253 Msa0472010:CDS 50.0%
ATACTGATCCAGAGGCTGGT+AGG + chr3_3:74415651-74415670 Msa0472010:CDS 50.0%
GGTAGGTGCAGAAGAACAGA+TGG + chr3_3:74415668-74415687 Msa0472010:CDS 50.0%
TCCACAGGCTTTCTTGAACG+GGG - chr3_3:74415767-74415786 None:intergenic 50.0%
GAGATAAGGATGAAGGGGAG+TGG - chr3_3:74415948-74415967 None:intergenic 50.0%
GAATGAAAAGGGGCTTGGAG+TGG + chr3_3:74416392-74416411 Msa0472010:intron 50.0%
AGAACCATTGTTGGAGGTGG+TGG - chr3_3:74416722-74416741 None:intergenic 50.0%
TGCAGAACCATTGTTGGAGG+TGG - chr3_3:74416725-74416744 None:intergenic 50.0%
GCTCAATCCAGCACAACCTT+GGG + chr3_3:74416876-74416895 Msa0472010:CDS 50.0%
AATCCAGCACAACCTTGGGT+AGG + chr3_3:74416880-74416899 Msa0472010:CDS 50.0%
GGCCTTAGAACTTCAGCTAG+TGG - chr3_3:74416922-74416941 None:intergenic 50.0%
GTCGAATCCATTGGCACTTC+AGG + chr3_3:74417012-74417031 Msa0472010:CDS 50.0%
TCACAGGCAGAGACTAGAGA+TGG - chr3_3:74417440-74417459 None:intergenic 50.0%
TGATAATCCCGTCAACGCCA+CGG + chr3_3:74418628-74418647 Msa0472010:intron 50.0%
! TTTGTGAACCGTGGCGTTGA+CGG - chr3_3:74418639-74418658 None:intergenic 50.0%
AGCATCATGGCCTACGGTTT+CGG - chr3_3:74419164-74419183 None:intergenic 50.0%
AAATAATCCAGGCACGCGCA+CGG + chr3_3:74419412-74419431 Msa0472010:intron 50.0%
TGCTGATCGCACTGTCCTTA+AGG - chr3_3:74420141-74420160 None:intergenic 50.0%
CATGCAATCAGCTTCCCAAG+CGG - chr3_3:74420562-74420581 None:intergenic 50.0%
GCTGATTGCATGCTCAAGTG+TGG + chr3_3:74420570-74420589 Msa0472010:intron 50.0%
GTGACTGCAAGCGACAACAT+CGG - chr3_3:74421868-74421887 None:intergenic 50.0%
GGGAACCCAACCTTTGTGAT+TGG + chr3_3:74422197-74422216 Msa0472010:intron 50.0%
CACACACCATAGGAAAGGGA+CGG - chr3_3:74422310-74422329 None:intergenic 50.0%
GCACTTCTCACACACACCAT+AGG - chr3_3:74422320-74422339 None:intergenic 50.0%
TGCTGATCGCACTGTCCTTA+AGG - chr3_3:74420141-74420160 None:intergenic 50.0%
GGAGTATGCCCTCCAAACAA+AGG - chr3_3:74423596-74423615 None:intergenic 50.0%
CTACGTACCTGGTGTGTCAA+AGG - chr3_3:74423902-74423921 None:intergenic 50.0%
!! GGGTCGGTGCAGAGTTTTGA+AGG + chr3_3:74414829-74414848 Msa0472010:CDS 55.0%
GGGGGTGATTCTTCTGCTCT+AGG + chr3_3:74414991-74415010 Msa0472010:CDS 55.0%
GTGTTTGTGGTGGTCACAGC+AGG + chr3_3:74415206-74415225 Msa0472010:intron 55.0%
TTTGTGGTGGTCACAGCAGG+TGG + chr3_3:74415209-74415228 Msa0472010:intron 55.0%
TCCCCGTTCAAGAAAGCCTG+TGG + chr3_3:74415763-74415782 Msa0472010:CDS 55.0%
GGCTTGGAGTGGATGCTGAA+TGG + chr3_3:74416403-74416422 Msa0472010:CDS 55.0%
!! ATTGTTGGAGGTGGTGGTGG+TGG - chr3_3:74416716-74416735 None:intergenic 55.0%
ACCACCACCACCTCCAACAA+TGG + chr3_3:74416715-74416734 Msa0472010:CDS 55.0%
! ACCATTGTTGGAGGTGGTGG+TGG - chr3_3:74416719-74416738 None:intergenic 55.0%
GGCTCAATCCAGCACAACCT+TGG + chr3_3:74416875-74416894 Msa0472010:CDS 55.0%
GAACCTACCCAAGGTTGTGC+TGG - chr3_3:74416886-74416905 None:intergenic 55.0%
!! CCAGGTGTTGAACCTACCCA+AGG - chr3_3:74416895-74416914 None:intergenic 55.0%
CCTTGGGTAGGTTCAACACC+TGG + chr3_3:74416892-74416911 Msa0472010:CDS 55.0%
TGGGTAGGTTCAACACCTGG+TGG + chr3_3:74416895-74416914 Msa0472010:CDS 55.0%
! ACTTCAGCTAGTGGACCACC+AGG - chr3_3:74416913-74416932 None:intergenic 55.0%
TCCATTGGCACTTCAGGGAC+AGG + chr3_3:74417018-74417037 Msa0472010:CDS 55.0%
! TCCTGTCCCTGAAGTGCCAA+TGG - chr3_3:74417022-74417041 None:intergenic 55.0%
TGGCACTTCAGGGACAGGAA+TGG + chr3_3:74417023-74417042 Msa0472010:CDS 55.0%
ATGTGTGTGTGGTTGGGGTG+AGG + chr3_3:74418021-74418040 Msa0472010:intron 55.0%
TTGTAGGCCCAAGCAAGTGC+TGG + chr3_3:74418363-74418382 Msa0472010:intron 55.0%
!! TTGTGAACCGTGGCGTTGAC+GGG - chr3_3:74418638-74418657 None:intergenic 55.0%
GCCCCACTTGACACTCACAT+AGG - chr3_3:74419351-74419370 None:intergenic 55.0%
GGGCCGCTTGTATGAGATCT+TGG + chr3_3:74419367-74419386 Msa0472010:intron 55.0%
AGCGACAAACCCCCACATTG+AGG - chr3_3:74421675-74421694 None:intergenic 55.0%
GCCCCACTTGACACTCACAT+AGG - chr3_3:74419351-74419370 None:intergenic 55.0%
GGGCCGCTTGTATGAGATCT+TGG + chr3_3:74419367-74419386 Msa0472010:intron 55.0%
GGTGGTCACAGCAGGTGGAA+TGG + chr3_3:74415214-74415233 Msa0472010:intron 60.0%
GGTCACAGCAGGTGGAATGG+CGG + chr3_3:74415217-74415236 Msa0472010:intron 60.0%
GGTGGAATGGCGGCTTCAGT+AGG + chr3_3:74415227-74415246 Msa0472010:CDS 60.0%
CTTCTGCACCTACCAGCCTC+TGG - chr3_3:74415662-74415681 None:intergenic 60.0%
TGTGTGGTTGGGGTGAGGTG+AGG + chr3_3:74418026-74418045 Msa0472010:intron 60.0%
TTGGGGTGAGGTGAGGTGGT+GGG + chr3_3:74418033-74418052 Msa0472010:intron 60.0%
! TTGTGGGGGTGTGATGCGAG+TGG + chr3_3:74419468-74419487 Msa0472010:intron 60.0%
GCAATCAGCTTCCCAAGCGG+TGG - chr3_3:74420559-74420578 None:intergenic 60.0%
TGGCACTGTGGTGCGCGAAT+AGG - chr3_3:74422531-74422550 None:intergenic 60.0%
! TTGTGGGGGTGTGATGCGAG+TGG + chr3_3:74419468-74419487 Msa0472010:intron 60.0%
!! GGAGGTGGTGGTGGTGGTGT+TGG - chr3_3:74416710-74416729 None:intergenic 65.0%
GTGGTTGGGGTGAGGTGAGG+TGG + chr3_3:74418029-74418048 Msa0472010:intron 65.0%
GTTGGGGTGAGGTGAGGTGG+TGG + chr3_3:74418032-74418051 Msa0472010:intron 65.0%
TGGGGTGAGGTGAGGTGGTG+GGG + chr3_3:74418034-74418053 Msa0472010:intron 65.0%
GAATAGGCCGTGCACGTGCC+TGG - chr3_3:74422515-74422534 None:intergenic 65.0%
GAATAGGCCGTGCGCGTGCC+TGG - chr3_3:74419422-74419441 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 74414757 74423921 74414757 ID=Msa0472010;Name=Msa0472010
chr3_3 mRNA 74414757 74423921 74414757 ID=Msa0472010-mRNA-1;Parent=Msa0472010;Name=Msa0472010-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0.25|0|0.8|1|1|5|0|616
chr3_3 exon 74414757 74415099 74414757 ID=Msa0472010-mRNA-1:exon:19040;Parent=Msa0472010-mRNA-1
chr3_3 exon 74415225 74415359 74415225 ID=Msa0472010-mRNA-1:exon:19041;Parent=Msa0472010-mRNA-1
chr3_3 exon 74415609 74416023 74415609 ID=Msa0472010-mRNA-1:exon:19042;Parent=Msa0472010-mRNA-1
chr3_3 exon 74416402 74417185 74416402 ID=Msa0472010-mRNA-1:exon:19043;Parent=Msa0472010-mRNA-1
chr3_3 exon 74423748 74423921 74423748 ID=Msa0472010-mRNA-1:exon:19044;Parent=Msa0472010-mRNA-1
chr3_3 CDS 74414757 74415099 74414757 ID=Msa0472010-mRNA-1:cds;Parent=Msa0472010-mRNA-1
chr3_3 CDS 74415225 74415359 74415225 ID=Msa0472010-mRNA-1:cds;Parent=Msa0472010-mRNA-1
chr3_3 CDS 74415609 74416023 74415609 ID=Msa0472010-mRNA-1:cds;Parent=Msa0472010-mRNA-1
chr3_3 CDS 74416402 74417185 74416402 ID=Msa0472010-mRNA-1:cds;Parent=Msa0472010-mRNA-1
chr3_3 CDS 74423748 74423921 74423748 ID=Msa0472010-mRNA-1:cds;Parent=Msa0472010-mRNA-1
Gene Sequence

>Msa0472010

ATGGGTGAGTTTCGCGTTCAAGACAAGGAACCTACAAAAAAAACCAACAACAATAACACTAGTAGTGTTGTTGGGTCGGTGCAGAGTTTTGAAGGTTTCTCTAATAAGAACATGATGATACTGCAACATCATAATCATCACCACCGTTCATTCTTTGATAATCATGATTCTTCTTCTGTTTCTGCTGCTGTTGATGCTGATGGTTATGGTCCCACAACATACAACATGTCTTTTGGGGGTGATTCTTCTGCTCTAGGTGCTAATGCTATCATTGATAATGGCGGTGTATCCTTAAATTTTCAACCTTTTCACAACATTTCTGCTTCCAACACAACCCTTAAAGCAGGTGGAATGGCGGCTTCAGTAGGAATAGGGTATCCTCCTTTCACAATTGCTCAATGGAGAGAGCTTGAAAGACAAGCTATGATTTACAAGTACTTGATGGCTTCACTTCCTGTTCCTTCTCATCTTCTTTCATCAGTGGATGGTGGTTTCAATCTGAGGCTATCAAATAGGAACAATACTGATCCAGAGGCTGGTAGGTGCAGAAGAACAGATGGTAAAAAATGGAGATGTTCAAGAGATGTAGCTCCTAATAACAAGTACTGTGAAAGACATATGCATAGAGGTCGTCCCCGTTCAAGAAAGCCTGTGGAACTTCACACAAATAACAATAACAATAGCAATAGTCATCATCAAATCAAAAGGGCTCGTTGTGATTCTTCTAATTCTTTTTCACTGCCTGATTTTACTGTGGCTGTTCCTCCTAATCCAACTACAAGAAAATATGGATCTTCATCACATTTTCTTGCTTCCACTCCCCTTCATCCTTATCTCCAATCTTCATTTTCTTTGCATAATAGCAGCTTTGAGGCTTCAAATAAGCAACCAAGGGGCTTGGAGTGGATGCTGAATGGAGATCCAATTTCCCTTGGTGCTTCTAATTCAGGATGGAATCCTCTGATGCATAACAACAAACTTGGAATGACCAATGGAAGTTCCTATCATAATAACACTGAATCCCAGTATCTGAATTCATTTCCACTATATAACAGTTCTGAACTAGCTCAACATGAAAAACCCTTTCCTCTCTTACTTAATCCCCTTGTTGTTCCAATGCAAACTCTCCAATCTGAGAAACCAAGAGGTTTTAGTTTCATTGATGCTTGGTCTAATGCAGAGACAGTGGAAAACAATGCCAACACCACCACCACCACCTCCAACAATGGTTCTGCATCAGTTGGTAAATTATCCCTTTCATCACTTGATCTATCAATGGGAGGTAGTGCTGTGAGTGAAGAAATGAGTACTATTGAAATGAATGCTGCGAGTGATGATGATAGTACTAAAATAGCATTCTCAAGTTGGCTCAATCCAGCACAACCTTGGGTAGGTTCAACACCTGGTGGTCCACTAGCTGAAGTTCTAAGGCCAAGCAATGTTACTTCCATCAGTGATGCAACAAATTCTAATTCATCATCAACTCTCACAACAACAAATCGTGTCGAATCCATTGGCACTTCAGGGACAGGAATGGTATCATCTCCATCTGGTGTTTTGCATAATAAAACACTTGCTTCATTTTCTGATAGTAGTGGTAATAGCAGTCCAAATGTTGCATCATCAAGGGCTAATTCTGAAATTGCCTTACTCAATAAGTTTAATCATATTTCATATGATGTGATGAACTCTATATACAAACTGTCTAAGGCATCTCATCGTCAATCTGTTTGCATAATTTCTGTGAGCGGTTCTGTATCAAATTCTGTGAGCGGTTCTGTATCAAAGGCTTTATGTATCAAAGGCTGTCCTTCATACTCCAAATGGTCCTTTGACACACCAGGTACGTAG

Protein sequence

>Msa0472010

MGEFRVQDKEPTKKTNNNNTSSVVGSVQSFEGFSNKNMMILQHHNHHHRSFFDNHDSSSVSAAVDADGYGPTTYNMSFGGDSSALGANAIIDNGGVSLNFQPFHNISASNTTLKAGGMAASVGIGYPPFTIAQWRELERQAMIYKYLMASLPVPSHLLSSVDGGFNLRLSNRNNTDPEAGRCRRTDGKKWRCSRDVAPNNKYCERHMHRGRPRSRKPVELHTNNNNNSNSHHQIKRARCDSSNSFSLPDFTVAVPPNPTTRKYGSSSHFLASTPLHPYLQSSFSLHNSSFEASNKQPRGLEWMLNGDPISLGASNSGWNPLMHNNKLGMTNGSSYHNNTESQYLNSFPLYNSSELAQHEKPFPLLLNPLVVPMQTLQSEKPRGFSFIDAWSNAETVENNANTTTTTSNNGSASVGKLSLSSLDLSMGGSAVSEEMSTIEMNAASDDDSTKIAFSSWLNPAQPWVGSTPGGPLAEVLRPSNVTSISDATNSNSSSTLTTTNRVESIGTSGTGMVSSPSGVLHNKTLASFSDSSGNSSPNVASSRANSEIALLNKFNHISYDVMNSIYKLSKASHRQSVCIISVSGSVSNSVSGSVSKALCIKGCPSYSKWSFDTPGT*