AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0472990

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0472990 MtrunA17_Chr3g0128511 99.422 346 2 0 1 346 1 346 0.0 694
Msa0472990 MtrunA17_Chr2g0281301 30.233 344 212 8 1 336 14 337 1.94e-34 129
Msa0472990 MtrunA17_Chr4g0045061 31.190 311 183 9 44 338 328 623 3.17e-33 129
Msa0472990 MtrunA17_Chr2g0281281 30.795 302 197 4 40 336 30 324 7.70e-32 122
Msa0472990 MtrunA17_Chr4g0045041 31.270 307 188 9 44 338 328 623 6.67e-31 123
Msa0472990 MtrunA17_Chr4g0013331 30.100 299 201 5 40 336 81 373 6.28e-29 115
Msa0472990 MtrunA17_Chr8g0365421 29.126 309 172 10 40 335 106 380 6.72e-24 101
Msa0472990 MtrunA17_Chr6g0466321 33.750 240 132 8 25 250 33 259 3.84e-23 98.2
Msa0472990 MtrunA17_Chr6g0465501 33.750 240 132 8 25 250 33 259 4.19e-23 98.2
Msa0472990 MtrunA17_Chr6g0453201 28.213 319 179 11 30 335 35 316 3.19e-18 84.3
Msa0472990 MtrunA17_Chr6g0453191 32.099 243 138 8 30 261 35 261 6.09e-18 83.2
Msa0472990 MtrunA17_Chr7g0228011 29.012 324 176 11 28 335 28 313 2.43e-16 78.6
Msa0472990 MtrunA17_Chr7g0214831 26.335 281 183 8 68 335 72 341 3.25e-16 78.6
Msa0472990 MtrunA17_Chr8g0385221 25.301 249 168 8 92 335 187 422 1.79e-14 73.9
Msa0472990 MtrunA17_Chr4g0015091 33.149 181 107 5 30 200 29 205 5.45e-14 72.0
Msa0472990 MtrunA17_Chr4g0014691 30.601 183 109 6 30 200 29 205 2.48e-12 67.0
Msa0472990 MtrunA17_Chr4g0014541 30.601 183 109 6 30 200 29 205 2.53e-12 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0472990 AT3G56460.1 77.101 345 78 1 1 344 1 345 0.0 523
Msa0472990 AT1G49670.1 31.546 317 184 10 44 343 328 628 1.61e-31 125
Msa0472990 AT1G49670.2 30.088 339 183 12 44 343 328 651 1.68e-29 119
Msa0472990 AT4G21580.1 29.866 298 203 4 40 335 30 323 1.14e-28 113
Msa0472990 AT5G61510.2 29.431 299 203 5 40 336 56 348 7.78e-26 106
Msa0472990 AT4G21580.3 29.195 298 199 5 40 335 30 317 1.46e-25 105
Msa0472990 AT5G61510.1 29.431 299 203 5 40 336 113 405 1.91e-25 106
Msa0472990 AT4G21580.2 28.328 293 206 2 44 335 1 290 6.42e-25 102
Msa0472990 AT1G23740.1 26.852 324 189 11 25 335 94 382 2.04e-23 100
Msa0472990 AT3G15090.1 27.405 343 195 13 25 337 48 366 1.66e-17 83.2
Msa0472990 AT4G13010.1 35.359 181 105 6 30 200 27 205 7.11e-14 72.0
Msa0472990 AT3G45770.1 25.926 270 191 5 17 280 51 317 1.70e-13 71.2
Msa0472990 AT5G63620.1 25.000 236 164 5 100 332 196 421 1.29e-12 68.9
Msa0472990 AT5G63620.2 25.000 236 164 5 100 332 196 421 2.83e-12 67.8
Msa0472990 AT3G45770.2 26.667 240 168 4 46 280 3 239 4.05e-12 66.6

Find 129 sgRNAs with CRISPR-Local

Find 548 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAGCGAACATTCTAATAAT+TGG 0.169619 3_3:+75484468 Msa0472990:CDS
CAGTTTGGCAATTATTTATT+TGG 0.185393 3_3:-75487311 None:intergenic
GCTAATTACTTGCAGATTCT+TGG 0.190783 3_3:+75483027 Msa0472990:CDS
TGATTCTTGGATATGATTAT+TGG 0.197695 3_3:-75482937 None:intergenic
CTTAAGGTCAAAAGGCTTAA+AGG 0.221379 3_3:+75484378 Msa0472990:CDS
GGACAGTACATGGACTTTAT+TGG 0.229971 3_3:+75486252 Msa0472990:CDS
CAATCTCTCCAGCATTATTA+AGG 0.241140 3_3:+75487523 Msa0472990:three_prime_UTR
GACAGTACATGGACTTTATT+GGG 0.241684 3_3:+75486253 Msa0472990:CDS
CCTCCTTTGCCATTCATTCC+TGG 0.241695 3_3:+75483066 Msa0472990:CDS
GTTTGTTCCTTTGCTGCTCT+TGG 0.265097 3_3:+75483156 Msa0472990:CDS
GGAGCACTTGCTGTGGCATT+TGG 0.265900 3_3:+75483495 Msa0472990:CDS
TTCATGAGCTTGCCTCCTAC+TGG 0.267191 3_3:-75484420 None:intergenic
ATGATCCTACATAAGAAAAT+TGG 0.271530 3_3:-75487642 None:intergenic
AGGATCACCAACACGGAAAT+TGG 0.272120 3_3:-75483133 None:intergenic
GAGAGGATCCGTGTGCTTAT+TGG 0.283165 3_3:-75487482 None:intergenic
TTTGTAGGTATTGCTAGTTT+TGG 0.301867 3_3:+75483662 Msa0472990:intron
GATTCTTGGATATGATTATT+GGG 0.311570 3_3:-75482936 None:intergenic
TGTTGATCATGTGGTGGACT+TGG 0.319846 3_3:+75484320 Msa0472990:CDS
TCTCATTTGTAATTGCAAAT+TGG 0.322778 3_3:+75487697 Msa0472990:three_prime_UTR
AATCTTTGCGGCTTCTGAAA+TGG 0.328075 3_3:+75484445 Msa0472990:CDS
AGAGGATCCGTGTGCTTATT+GGG 0.331083 3_3:-75487481 None:intergenic
GATTCACGCGAATTGCAATT+TGG 0.331473 3_3:+75487374 Msa0472990:three_prime_UTR
TTAAGGTCAAAAGGCTTAAA+GGG 0.333113 3_3:+75484379 Msa0472990:CDS
CTCCTACATCGGTTAGAGTT+AGG 0.333628 3_3:+75482980 Msa0472990:CDS
ATCTTTGCGGCTTCTGAAAT+GGG 0.343716 3_3:+75484446 Msa0472990:CDS
TATGCTCGACTAATATCTTC+TGG 0.348556 3_3:+75487228 Msa0472990:three_prime_UTR
ATGCTATTTATCACTAATAA+TGG 0.355505 3_3:+75487345 Msa0472990:three_prime_UTR
GGTTGTGATTTGGTTGCTGC+TGG 0.359205 3_3:+75483474 Msa0472990:CDS
TTGAGGGATAGGGTGATTCT+TGG 0.360038 3_3:-75482950 None:intergenic
CGTCTTCAACGCTCACCGTT+GGG 0.366387 3_3:-75482906 None:intergenic
GAACAAAACGTGAGTTGAAA+TGG 0.380535 3_3:+75482855 Msa0472990:exon
ATCAGAGATAGGAAAGCTAT+AGG 0.384250 3_3:+75487140 Msa0472990:CDS
GAGCGAACATTCTAATAATT+GGG 0.396914 3_3:+75484469 Msa0472990:CDS
GGTCTTGCAGCTGTGCAAAT+TGG 0.397069 3_3:+75483702 Msa0472990:CDS
GAATCACCCTATCCCTCAAT+TGG 0.401681 3_3:+75482954 Msa0472990:CDS
CCTTCACTGCCATCAGAGAT+AGG 0.409182 3_3:+75487129 Msa0472990:CDS
AATTTGTAGGTTTCGCGTGC+CGG 0.416854 3_3:+75483449 Msa0472990:intron
GGGGCGTTAGATTAATCTAA+TGG 0.417996 3_3:+75487544 Msa0472990:three_prime_UTR
CATAGAGCTCAGTTGAAATC+TGG 0.418835 3_3:+75483540 Msa0472990:CDS
CGTGCCGGAGGGTTGTGATT+TGG 0.423686 3_3:+75483464 Msa0472990:CDS
TTTGTATACTAGCATCTCCT+TGG 0.427995 3_3:-75487282 None:intergenic
GTTCACATTTCTCATTCTTA+CGG 0.428188 3_3:+75486359 Msa0472990:CDS
GCATCTATTCTACAACAGTT+TGG 0.433813 3_3:-75487326 None:intergenic
AGAGAATCTTCAAGAACAGC+TGG 0.435112 3_3:-75486296 None:intergenic
TCTGGGCACTCAAACATCAT+AGG 0.441996 3_3:+75487246 Msa0472990:three_prime_UTR
TCGTCTTCAACGCTCACCGT+TGG 0.443222 3_3:-75482907 None:intergenic
AATCTCTCCAGCATTATTAA+GGG 0.455571 3_3:+75487524 Msa0472990:three_prime_UTR
TCAATTGGATTCTCCTACAT+CGG 0.456528 3_3:+75482969 Msa0472990:CDS
GGAGAATCCAATTGAGGGAT+AGG 0.460120 3_3:-75482961 None:intergenic
TTGGGTGCAGCAGGAGGTGT+GGG 0.460493 3_3:+75483681 Msa0472990:CDS
AAGAGTTCCTTAAGGTCAAA+AGG 0.464102 3_3:+75484370 Msa0472990:CDS
TCAGGCATCGTTGATTCCGT+TGG 0.466758 3_3:+75483099 Msa0472990:CDS
CTAACGCCCCTTAATAATGC+TGG 0.468588 3_3:-75487531 None:intergenic
GGTGCAGCTCTTGAAATCAA+TGG 0.469140 3_3:+75484296 Msa0472990:CDS
AATAATGCTGGAGAGATTGA+TGG 0.469461 3_3:-75487519 None:intergenic
CTACTGTCTTGGTTGGCAAA+AGG 0.470601 3_3:+75486326 Msa0472990:CDS
TCAGAGATAGGAAAGCTATA+GGG 0.473276 3_3:+75487141 Msa0472990:CDS
AAATCTGATCCAGGAATGAA+TGG 0.473348 3_3:-75483075 None:intergenic
TTAACAAGAGCTATGTTAGC+AGG 0.478741 3_3:-75484519 None:intergenic
TCATGAGCTTGCCTCCTACT+GGG 0.478839 3_3:-75484419 None:intergenic
GCTATGTTAGCAGGGATGAC+AGG 0.479328 3_3:-75484510 None:intergenic
GTGCAGCTCTTGAAATCAAT+GGG 0.486437 3_3:+75484297 Msa0472990:CDS
AGCTCAGTTGAAATCTGGTC+AGG 0.487489 3_3:+75483545 Msa0472990:CDS
TGCCTCCTACTGGGTCATAC+AGG 0.492735 3_3:-75484410 None:intergenic
TGCTAACATAGCTCTTGTTA+AGG 0.494266 3_3:+75484521 Msa0472990:CDS
GATGGCAGTGAAGGCGAGGT+TGG 0.495840 3_3:-75487120 None:intergenic
ATGCTCGACTAATATCTTCT+GGG 0.496198 3_3:+75487229 Msa0472990:three_prime_UTR
CTCTCAAGGAGCTACTGTCT+TGG 0.497731 3_3:+75486315 Msa0472990:CDS
AGGAGATGCTAGTATACAAA+AGG 0.502843 3_3:+75487285 Msa0472990:three_prime_UTR
GTTTCATTACATAACAGAAT+CGG 0.505113 3_3:+75482825 Msa0472990:intron
GCATTTGGCACTTCACATGT+TGG 0.508528 3_3:+75483510 Msa0472990:CDS
TTAATTCGTCCTAGTTACTC+AGG 0.508570 3_3:+75478109 Msa0472990:five_prime_UTR
TGCTGCTGGAGCACTTGCTG+TGG 0.510040 3_3:+75483488 Msa0472990:CDS
GTTGATCATGTGGTGGACTT+GGG 0.511415 3_3:+75484321 Msa0472990:CDS
TGGCAGAATTGGACAGTACA+TGG 0.511468 3_3:+75486242 Msa0472990:intron
TTTGGGTGCAGCAGGAGGTG+TGG 0.512176 3_3:+75483680 Msa0472990:CDS
AGAGCAGCAAAGGAACAAAC+AGG 0.514377 3_3:-75483153 None:intergenic
CTATTGTCATTGCTGTTGCT+AGG 0.516037 3_3:+75483739 Msa0472990:CDS
TGTAGGTTTCGCGTGCCGGA+GGG 0.517884 3_3:+75483453 Msa0472990:intron
TTGTAGGTTTCGCGTGCCGG+AGG 0.522078 3_3:+75483452 Msa0472990:intron
AACACGGAAATTGGTAACAT+TGG 0.526095 3_3:-75483124 None:intergenic
TGCTGCCAGAAAACCTAAGC+TGG 0.526575 3_3:-75478064 None:intergenic
TATAGCTTTCCTATCTCTGA+TGG 0.527406 3_3:-75487138 None:intergenic
AAACTTGAACCTGAGTAACT+AGG 0.531004 3_3:-75478118 None:intergenic
AATGTTACCAATTTCCGTGT+TGG 0.534038 3_3:+75483126 Msa0472990:CDS
TTAGATTAATCTAATGGCTG+AGG 0.535808 3_3:+75487550 Msa0472990:three_prime_UTR
ATCCTAACTCTAACCGATGT+AGG 0.537658 3_3:-75482982 None:intergenic
ATGTAGGAGAATCCAATTGA+GGG 0.540400 3_3:-75482966 None:intergenic
CTAATAATTGGGTTTGCAAG+TGG 0.543319 3_3:+75484480 Msa0472990:CDS
AGCTCATGAAAGAATCTTTG+CGG 0.548659 3_3:+75484433 Msa0472990:CDS
ATTAGCGAAATTCAAGCTTG+TGG 0.550287 3_3:-75483010 None:intergenic
ATAAGATCCAAGAGCAGCAA+AGG 0.551039 3_3:-75483163 None:intergenic
CCTATCTCTGATGGCAGTGA+AGG 0.555242 3_3:-75487129 None:intergenic
ATTGATGGAGAGAGCACGGA+AGG 0.556663 3_3:-75487504 None:intergenic
CCAGGAATGAATGGCAAAGG+AGG 0.564534 3_3:-75483066 None:intergenic
CTCTGATGGCAGTGAAGGCG+AGG 0.567574 3_3:-75487124 None:intergenic
CAAGGAGCTACTGTCTTGGT+TGG 0.572684 3_3:+75486319 Msa0472990:CDS
TGTTCTTGAAGATTCTCTCA+AGG 0.573910 3_3:+75486301 Msa0472990:CDS
ATTGGTAACATTGGAACCAA+CGG 0.576019 3_3:-75483115 None:intergenic
TGGAGAGAGCACGGAAGGAG+AGG 0.577292 3_3:-75487499 None:intergenic
GAGTGTGAAAGAGTTCCTTA+AGG 0.578196 3_3:+75484362 Msa0472990:CDS
AGAGAGATGTGCAGCACGCG+TGG 0.580307 3_3:-75487400 None:intergenic
GCAGATTCTTGGAAAGTACC+AGG 0.581141 3_3:+75483038 Msa0472990:CDS
ATGGCAAAGGAGGTTTCTCC+TGG 0.585688 3_3:-75483056 None:intergenic
TGCAAATTGGAAAAGCATGT+GGG 0.585981 3_3:+75483715 Msa0472990:CDS
TCATTCTTACGGCCTGTCAG+AGG 0.586401 3_3:+75486370 Msa0472990:CDS
AGAGATTGATGGAGAGAGCA+CGG 0.601351 3_3:-75487508 None:intergenic
GAGAATCCAATTGAGGGATA+GGG 0.603597 3_3:-75482960 None:intergenic
TCTTTGCGGCTTCTGAAATG+GGG 0.609441 3_3:+75484447 Msa0472990:CDS
TAGATTAATCTAATGGCTGA+GGG 0.609597 3_3:+75487551 Msa0472990:three_prime_UTR
GATCCAGGAATGAATGGCAA+AGG 0.610430 3_3:-75483069 None:intergenic
TAACAAGAGCTATGTTAGCA+GGG 0.614061 3_3:-75484518 None:intergenic
ATCTCTCCAGCATTATTAAG+GGG 0.620436 3_3:+75487525 Msa0472990:three_prime_UTR
TAGGTTCATATTAGAGACCA+AGG 0.621322 3_3:+75487265 Msa0472990:three_prime_UTR
GCAACCAAATCACAACCCTC+CGG 0.621624 3_3:-75483468 None:intergenic
CAGAAAATTGGGTGACCCAA+CGG 0.628219 3_3:+75482891 Msa0472990:CDS
ATCAATGGGTGTTGATCATG+TGG 0.629567 3_3:+75484311 Msa0472990:CDS
AACAAACAGGATCACCAACA+CGG 0.633492 3_3:-75483140 None:intergenic
GATGTAGGAGAATCCAATTG+AGG 0.636037 3_3:-75482967 None:intergenic
AGATAGGAAAGCTATAGGGA+AGG 0.636916 3_3:+75487145 Msa0472990:CDS
GTCCTGTATGACCCAGTAGG+AGG 0.637191 3_3:+75484408 Msa0472990:CDS
GTGCAAATTGGAAAAGCATG+TGG 0.641885 3_3:+75483714 Msa0472990:CDS
GATGTCCTGTATGACCCAGT+AGG 0.653197 3_3:+75484405 Msa0472990:CDS
GAGAATCTTCAAGAACAGCT+GGG 0.655056 3_3:-75486295 None:intergenic
AATGGGTGTTGATCATGTGG+TGG 0.686665 3_3:+75484314 Msa0472990:CDS
ACAGTACATGGACTTTATTG+GGG 0.692527 3_3:+75486254 Msa0472990:CDS
GTAAGAATGAGAAATGTGAA+CGG 0.692858 3_3:-75486357 None:intergenic
AATAGTTCCCAATAAGCACA+CGG 0.696494 3_3:+75487474 Msa0472990:three_prime_UTR
GCAAATTGGAAAAGCATGTG+GGG 0.732786 3_3:+75483716 Msa0472990:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATTAAATATTTTAAATA+TGG + chr3_3:75480994-75481013 Msa0472990:intron 0.0%
!!! TTTTTGCTTATAATATTTAT+TGG - chr3_3:75478177-75478196 None:intergenic 10.0%
!!! TAATCATAATAACTTTTTTT+TGG + chr3_3:75478314-75478333 Msa0472990:intron 10.0%
!!! TTACATTAATTTTAGTTAAA+AGG + chr3_3:75481873-75481892 Msa0472990:intron 10.0%
!! CAAATTTAAACTAAAAAAAT+AGG - chr3_3:75486928-75486947 None:intergenic 10.0%
!!! GGTTATTTTTCAAAATATTT+TGG + chr3_3:75478335-75478354 Msa0472990:intron 15.0%
!!! AAAACACTAACTTTTTTTTT+TGG - chr3_3:75478433-75478452 None:intergenic 15.0%
!! TAATTAAAATATAAAAGGGT+TGG + chr3_3:75478673-75478692 Msa0472990:intron 15.0%
!! ATAATTATCTATAATAGTGA+AGG - chr3_3:75479233-75479252 None:intergenic 15.0%
!! GATAATAAGCAAATTATTAA+TGG - chr3_3:75479534-75479553 None:intergenic 15.0%
!! TTTGAAAAAAATAACTAACT+TGG + chr3_3:75479731-75479750 Msa0472990:intron 15.0%
!!! TATTAAAAGCTTACTTATTT+TGG + chr3_3:75480875-75480894 Msa0472990:intron 15.0%
!! ATAATGATATCATATTTGTT+AGG - chr3_3:75480940-75480959 None:intergenic 15.0%
!!! TTTTATCTTGAGTATAAATT+GGG - chr3_3:75481120-75481139 None:intergenic 15.0%
!!! TTTTTATCTTGAGTATAAAT+TGG - chr3_3:75481121-75481140 None:intergenic 15.0%
!! AAGAAATAGTTAATTTCAAT+AGG + chr3_3:75481394-75481413 Msa0472990:intron 15.0%
!!! ATTAAAAGATTGTTTTTGTT+TGG - chr3_3:75481500-75481519 None:intergenic 15.0%
!!! ATGGTTGAATATTTAATTTA+AGG + chr3_3:75481653-75481672 Msa0472990:intron 15.0%
!!! TATATAAAAAAGTGTTTGTA+GGG - chr3_3:75482088-75482107 None:intergenic 15.0%
!!! ATATATAAAAAAGTGTTTGT+AGG - chr3_3:75482089-75482108 None:intergenic 15.0%
!! TATAAATTCTTTGAATTTGT+AGG + chr3_3:75483436-75483455 Msa0472990:intron 15.0%
!!! TAAAGTTATAGTTGTTTTAT+GGG + chr3_3:75484023-75484042 Msa0472990:intron 15.0%
!! AACAAAAAATGACATATAAA+TGG + chr3_3:75485055-75485074 Msa0472990:intron 15.0%
!! ACAAAAAATGACATATAAAT+GGG + chr3_3:75485056-75485075 Msa0472990:intron 15.0%
!! TATTTGGTATATAATGAAAA+AGG + chr3_3:75485526-75485545 Msa0472990:intron 15.0%
!! TTATGTATGTAGTTTAAATT+AGG - chr3_3:75485839-75485858 None:intergenic 15.0%
!! AAATACACAAATTATTAGAA+CGG - chr3_3:75486417-75486436 None:intergenic 15.0%
!!! TTTACTGAATCTTTTTTTTT+TGG + chr3_3:75486549-75486568 Msa0472990:intron 15.0%
!!! TTACTGAATCTTTTTTTTTT+GGG + chr3_3:75486550-75486569 Msa0472990:intron 15.0%
!!! AATTTTGGTGAAATATTTTA+TGG + chr3_3:75486875-75486894 Msa0472990:intron 15.0%
!!! AAATATTTTATGGATTATGT+TGG + chr3_3:75486885-75486904 Msa0472990:intron 15.0%
!!! AAGTTATTATAATTTTTTGG+TGG + chr3_3:75487439-75487458 Msa0472990:three_prime_UTR 15.0%
!!! AGTTATTATAATTTTTTGGT+GGG + chr3_3:75487440-75487459 Msa0472990:three_prime_UTR 15.0%
!!! TTCAAGTTTATTTTCTATTC+TGG + chr3_3:75478132-75478151 Msa0472990:intron 20.0%
!!! TCAAGTTTATTTTCTATTCT+GGG + chr3_3:75478133-75478152 Msa0472990:intron 20.0%
!! TGCTTATAATATTTATTGGA+TGG - chr3_3:75478173-75478192 None:intergenic 20.0%
!!! CTTTTGTTTATAATAGTGAT+TGG + chr3_3:75478266-75478285 Msa0472990:intron 20.0%
!! TCTATATCTATATAGTAGAA+AGG - chr3_3:75478486-75478505 None:intergenic 20.0%
!! ATATAGATATAGATAGATAC+TGG + chr3_3:75478493-75478512 Msa0472990:intron 20.0%
!!! GTTAGTTTCAACATATTATT+AGG - chr3_3:75478542-75478561 None:intergenic 20.0%
!! ATATGAATATATGAATGAAG+TGG + chr3_3:75479046-75479065 Msa0472990:intron 20.0%
!! ATAGATAATTATCCAACATT+CGG + chr3_3:75479241-75479260 Msa0472990:intron 20.0%
!!! GCATAGTTTGTATAAAATAA+TGG - chr3_3:75479706-75479725 None:intergenic 20.0%
!! AGGAGTAAAATAAACTAAAA+AGG - chr3_3:75479805-75479824 None:intergenic 20.0%
!!! TTTTTAATTGTTTCATTTGC+AGG - chr3_3:75480342-75480361 None:intergenic 20.0%
!! TGCAAATGAAACAATTAAAA+AGG + chr3_3:75480341-75480360 Msa0472990:intron 20.0%
!!! TTCTGTTGTTTAAAGTTAAA+AGG + chr3_3:75480413-75480432 Msa0472990:intron 20.0%
!!! CAAAACGAAAACTTTATTTT+TGG - chr3_3:75480602-75480621 None:intergenic 20.0%
!! GATAAAGACATAATATGATA+TGG + chr3_3:75480692-75480711 Msa0472990:intron 20.0%
!! AAAATAGTGTAATTATTACC+TGG - chr3_3:75480854-75480873 None:intergenic 20.0%
!!! AATGAATTTTTAATTATGCC+AGG + chr3_3:75481083-75481102 Msa0472990:intron 20.0%
!! ACTCAAGATAAAAATTACAA+AGG + chr3_3:75481127-75481146 Msa0472990:intron 20.0%
!! CATATCTTATCTTTATATCA+TGG + chr3_3:75481240-75481259 Msa0472990:intron 20.0%
!!! AGTTACCTTTAAAACTTTTA+GGG - chr3_3:75481278-75481297 None:intergenic 20.0%
!!! TGAAATTAACTATTTCTTGT+GGG - chr3_3:75481392-75481411 None:intergenic 20.0%
!!! TTGAAATTAACTATTTCTTG+TGG - chr3_3:75481393-75481412 None:intergenic 20.0%
!!! AATGTAAATTTACTCCTTTT+GGG - chr3_3:75481681-75481700 None:intergenic 20.0%
!! CATGTTAAAAAGTTCAAAAT+AGG - chr3_3:75482462-75482481 None:intergenic 20.0%
!!! ACTTATTTTTTCGATAACTA+CGG - chr3_3:75482745-75482764 None:intergenic 20.0%
!! AAACAGAACAATATATACAT+TGG - chr3_3:75483607-75483626 None:intergenic 20.0%
!!! GTAAAGTTATAGTTGTTTTA+TGG + chr3_3:75484022-75484041 Msa0472990:intron 20.0%
!! ACATTCTATGATAATCAATT+CGG + chr3_3:75484671-75484690 Msa0472990:intron 20.0%
!! ATAATCAATTCGGAATTAAT+TGG + chr3_3:75484681-75484700 Msa0472990:intron 20.0%
!! TAATCAATTCGGAATTAATT+GGG + chr3_3:75484682-75484701 Msa0472990:intron 20.0%
!! AATAAATGCACAAATTGTAT+GGG - chr3_3:75484889-75484908 None:intergenic 20.0%
!! AAATAAATGCACAAATTGTA+TGG - chr3_3:75484890-75484909 None:intergenic 20.0%
!! TCATTATATACCAAATATGT+AGG - chr3_3:75485523-75485542 None:intergenic 20.0%
!! TCCCATATAAATAAAAGAAA+AGG + chr3_3:75485772-75485791 Msa0472990:intron 20.0%
!!! GCCTTTTCTTTTATTTATAT+GGG - chr3_3:75485776-75485795 None:intergenic 20.0%
!!! AGCCTTTTCTTTTATTTATA+TGG - chr3_3:75485777-75485796 None:intergenic 20.0%
!! TTAATGTAAATATGCAATGT+GGG - chr3_3:75485981-75486000 None:intergenic 20.0%
!!! AGTGATTTTAACAAACAAAA+AGG - chr3_3:75486221-75486240 None:intergenic 20.0%
!! TAAAATTCAATGTACATTCA+AGG + chr3_3:75486449-75486468 Msa0472990:intron 20.0%
!!! CTCGTTAGTTTTTAAAATTT+TGG + chr3_3:75486860-75486879 Msa0472990:intron 20.0%
!! AATTTGATATACTGTATACT+TGG + chr3_3:75486942-75486961 Msa0472990:intron 20.0%
!! ATTTGATATACTGTATACTT+GGG + chr3_3:75486943-75486962 Msa0472990:intron 20.0%
!!! ATGCTATTTATCACTAATAA+TGG + chr3_3:75487345-75487364 Msa0472990:three_prime_UTR 20.0%
!! CAACAAAAAAAAAAGTGAAA+GGG - chr3_3:75487616-75487635 None:intergenic 20.0%
! TAAAAAAAACATACCAGCTT+AGG + chr3_3:75478051-75478070 Msa0472990:five_prime_UTR 25.0%
! TGTTTATAATAGTGATTGGA+TGG + chr3_3:75478270-75478289 Msa0472990:intron 25.0%
! TACCATGACAATTCTATATT+TGG + chr3_3:75478364-75478383 Msa0472990:intron 25.0%
! TACCAAATATAGAATTGTCA+TGG - chr3_3:75478369-75478388 None:intergenic 25.0%
! TGACAATTCTATATTTGGTA+TGG + chr3_3:75478369-75478388 Msa0472990:intron 25.0%
! AGATAGATACTGGATTTATA+TGG + chr3_3:75478503-75478522 Msa0472990:intron 25.0%
! ATCAATCAATAGACTCATAA+AGG + chr3_3:75478807-75478826 Msa0472990:intron 25.0%
! CGGTATTATTATGTAATTTC+TGG - chr3_3:75478848-75478867 None:intergenic 25.0%
! AATATCCCATATATATGCAT+GGG - chr3_3:75478979-75478998 None:intergenic 25.0%
! GAGACATATATACATAGTAA+TGG - chr3_3:75479147-75479166 None:intergenic 25.0%
!!! ATCATTTCTTAGTTTGCAAA+GGG - chr3_3:75479307-75479326 None:intergenic 25.0%
!! TTTCTTCTTTTGTCTAAACA+AGG + chr3_3:75479346-75479365 Msa0472990:intron 25.0%
! AGATATTGCATTTATATTGC+TGG + chr3_3:75479442-75479461 Msa0472990:intron 25.0%
! ATAACTAACTTGGAAAAGAA+AGG + chr3_3:75479741-75479760 Msa0472990:intron 25.0%
! TAACTAACTTGGAAAAGAAA+GGG + chr3_3:75479742-75479761 Msa0472990:intron 25.0%
!!! TTTTTTTTTTGCAAATGCCT+CGG - chr3_3:75479842-75479861 None:intergenic 25.0%
!!! TAATGTCACTTTCATATAAG+TGG + chr3_3:75479945-75479964 Msa0472990:intron 25.0%
!!! AATGTCACTTTCATATAAGT+GGG + chr3_3:75479946-75479965 Msa0472990:intron 25.0%
! ATATGCATTATTATATGCAG+GGG - chr3_3:75479994-75480013 None:intergenic 25.0%
! GATATGCATTATTATATGCA+GGG - chr3_3:75479995-75480014 None:intergenic 25.0%
! AAAACTCGATTATTATGAGA+CGG + chr3_3:75480102-75480121 Msa0472990:intron 25.0%
!! GAATCTATGGTAAAGTATTA+AGG - chr3_3:75480212-75480231 None:intergenic 25.0%
!!! CTCTTTTTTTTAGAGAATCT+AGG - chr3_3:75480518-75480537 None:intergenic 25.0%
! GAAAATGATACATTTAATGC+AGG + chr3_3:75480621-75480640 Msa0472990:intron 25.0%
! CAAGACAAAATTTCTACTTA+TGG - chr3_3:75480807-75480826 None:intergenic 25.0%
!! CATAAGTAGAAATTTTGTCT+TGG + chr3_3:75480805-75480824 Msa0472990:intron 25.0%
! AATTGGGTTAAATATTATCC+TGG - chr3_3:75481104-75481123 None:intergenic 25.0%
!!! GAGTTACCTTTAAAACTTTT+AGG - chr3_3:75481279-75481298 None:intergenic 25.0%
! ATAACCACGATTATCTATAA+GGG - chr3_3:75481423-75481442 None:intergenic 25.0%
!! TGACTTTTATGCTTCTAAAT+TGG + chr3_3:75481454-75481473 Msa0472990:intron 25.0%
!!! AAGATTGTTTTTGTTTGGTT+TGG - chr3_3:75481495-75481514 None:intergenic 25.0%
! TGTAGCAATCAAAAAACAAA+TGG + chr3_3:75481634-75481653 Msa0472990:intron 25.0%
!! TTTAATTTAAGGAACCCAAA+AGG + chr3_3:75481664-75481683 Msa0472990:intron 25.0%
!! CAATGTAAATTTACTCCTTT+TGG - chr3_3:75481682-75481701 None:intergenic 25.0%
! CAAAAGGAGTAAATTTACAT+TGG + chr3_3:75481680-75481699 Msa0472990:intron 25.0%
! GTTTAATAATGACGATCTTT+CGG - chr3_3:75481965-75481984 None:intergenic 25.0%
! AAAATAATGAGGACAATGTA+TGG - chr3_3:75481996-75482015 None:intergenic 25.0%
!! AAGATGTGTTTTCCTTTTTT+TGG - chr3_3:75482029-75482048 None:intergenic 25.0%
!! TTCTTTCTTGAGAATCATTT+TGG + chr3_3:75482395-75482414 Msa0472990:intron 25.0%
! AAAATAGGAAGAAAAAGATG+AGG - chr3_3:75482447-75482466 None:intergenic 25.0%
! GTTTCATTACATAACAGAAT+CGG + chr3_3:75482825-75482844 Msa0472990:intron 25.0%
! GATTCTTGGATATGATTATT+GGG - chr3_3:75482939-75482958 None:intergenic 25.0%
! TGATTCTTGGATATGATTAT+TGG - chr3_3:75482940-75482959 None:intergenic 25.0%
! TAGATACATTCACGTAAAAA+TGG + chr3_3:75483344-75483363 Msa0472990:intron 25.0%
! AGATACATTCACGTAAAAAT+GGG + chr3_3:75483345-75483364 Msa0472990:intron 25.0%
!!! CGTAAAAATGGGTTAAATAA+TGG + chr3_3:75483356-75483375 Msa0472990:intron 25.0%
! GTATATATTGTTCTGTTTGT+TGG + chr3_3:75483609-75483628 Msa0472990:intron 25.0%
!! TTGTAGCTTCTTAATTTTCA+CGG + chr3_3:75483904-75483923 Msa0472990:intron 25.0%
!! GCTTAGCTAAAATGAATTTT+GGG + chr3_3:75483975-75483994 Msa0472990:intron 25.0%
!!! ACTTTTGTTTAAATACACAC+AGG + chr3_3:75484112-75484131 Msa0472990:intron 25.0%
!! TGTAACTGATGACATTATTT+TGG - chr3_3:75484842-75484861 None:intergenic 25.0%
! AAATAATGTCATCAGTTACA+TGG + chr3_3:75484842-75484861 Msa0472990:intron 25.0%
! ATCAATGCTGAAAAATATAC+AGG + chr3_3:75485018-75485037 Msa0472990:intron 25.0%
! AAATAGATATGTACTAAGCA+TGG + chr3_3:75485132-75485151 Msa0472990:intron 25.0%
!!! AGTTTTTTCAAGGTTAGTTA+GGG - chr3_3:75485262-75485281 None:intergenic 25.0%
!!! TAGTTTTTTCAAGGTTAGTT+AGG - chr3_3:75485263-75485282 None:intergenic 25.0%
! AGATACATAGCATAAAGTAA+CGG - chr3_3:75485378-75485397 None:intergenic 25.0%
! GTAGATATATATCACAACTT+TGG - chr3_3:75485495-75485514 None:intergenic 25.0%
! AAGACTACATTAGACAATAA+AGG + chr3_3:75485632-75485651 Msa0472990:intron 25.0%
! CTTAATGTAAATATGCAATG+TGG - chr3_3:75485982-75486001 None:intergenic 25.0%
! TTTACATTAAGAGAAATGCT+AGG + chr3_3:75485991-75486010 Msa0472990:intron 25.0%
!! TTTGTTTGTTAAAATCACTC+TGG + chr3_3:75486222-75486241 Msa0472990:intron 25.0%
!! TAGTTCAATGTTCATTTTCT+TGG + chr3_3:75486643-75486662 Msa0472990:intron 25.0%
!! AGTTCAATGTTCATTTTCTT+GGG + chr3_3:75486644-75486663 Msa0472990:intron 25.0%
! TTAAAATTAGTGAGTGGTTA+GGG + chr3_3:75486683-75486702 Msa0472990:intron 25.0%
! TAAAAACTAACGAGAATAGA+AGG - chr3_3:75486854-75486873 None:intergenic 25.0%
! AAACAATTTCTTATTGTTGC+AGG + chr3_3:75487097-75487116 Msa0472990:intron 25.0%
! CAGTTTGGCAATTATTTATT+TGG - chr3_3:75487314-75487333 None:intergenic 25.0%
! CCAACAAAAAAAAAAGTGAA+AGG - chr3_3:75487617-75487636 None:intergenic 25.0%
!!! CCTTTCACTTTTTTTTTTGT+TGG + chr3_3:75487614-75487633 Msa0472990:three_prime_UTR 25.0%
!! CAATTCCAATTTTCTTATGT+AGG + chr3_3:75487637-75487656 Msa0472990:three_prime_UTR 25.0%
! ATGATCCTACATAAGAAAAT+TGG - chr3_3:75487645-75487664 None:intergenic 25.0%
! TCTCATTTGTAATTGCAAAT+TGG + chr3_3:75487697-75487716 Msa0472990:three_prime_UTR 25.0%
ATAGTAGAAAGGAAAATAGC+TGG - chr3_3:75478475-75478494 None:intergenic 30.0%
! GAGTCTATTGATTGATGAAA+AGG - chr3_3:75478803-75478822 None:intergenic 30.0%
!! AATTTCTGGCAATTAAACCA+AGG - chr3_3:75478834-75478853 None:intergenic 30.0%
CAATATCCCATATATATGCA+TGG - chr3_3:75478980-75478999 None:intergenic 30.0%
AAATTCATCATATATCCCTC+AGG + chr3_3:75479178-75479197 Msa0472990:intron 30.0%
ATACTTACAAAAGAACCTGA+GGG - chr3_3:75479196-75479215 None:intergenic 30.0%
!! CATCATTTCTTAGTTTGCAA+AGG - chr3_3:75479308-75479327 None:intergenic 30.0%
!! ATGTCACTTTCATATAAGTG+GGG + chr3_3:75479947-75479966 Msa0472990:intron 30.0%
GGATATGCATTATTATATGC+AGG - chr3_3:75479996-75480015 None:intergenic 30.0%
TAAGCATAACTCAATTGACA+GGG - chr3_3:75480017-75480036 None:intergenic 30.0%
ATAAGCATAACTCAATTGAC+AGG - chr3_3:75480018-75480037 None:intergenic 30.0%
TGTCAATTGAGTTATGCTTA+TGG + chr3_3:75480017-75480036 Msa0472990:intron 30.0%
GTCAATTGAGTTATGCTTAT+GGG + chr3_3:75480018-75480037 Msa0472990:intron 30.0%
GAGAAAGTAGATAGAATCTA+TGG - chr3_3:75480225-75480244 None:intergenic 30.0%
AAAATGAGCTCCTAGTTAAA+AGG + chr3_3:75480470-75480489 Msa0472990:intron 30.0%
TTAATCTAGGCTAAATGCAT+AGG - chr3_3:75480545-75480564 None:intergenic 30.0%
GCAATTGTTAGCATTAATCT+AGG - chr3_3:75480558-75480577 None:intergenic 30.0%
AGACATGATAGATATAGAGT+TGG + chr3_3:75480670-75480689 Msa0472990:intron 30.0%
ATGTGCACATGATAACAAAT+AGG + chr3_3:75480741-75480760 Msa0472990:intron 30.0%
TGTGCACATGATAACAAATA+GGG + chr3_3:75480742-75480761 Msa0472990:intron 30.0%
GTTTAATGCATCAAAGAGAT+AGG - chr3_3:75481189-75481208 None:intergenic 30.0%
!! ACGATCCCTAAAAGTTTTAA+AGG + chr3_3:75481270-75481289 Msa0472990:intron 30.0%
TGATCAAGTGACTTCTTATA+AGG - chr3_3:75481354-75481373 None:intergenic 30.0%
GATAACCACGATTATCTATA+AGG - chr3_3:75481424-75481443 None:intergenic 30.0%
! TTTATAGGTTTGGTATCTCA+TGG - chr3_3:75481528-75481547 None:intergenic 30.0%
TGTGGTGTAATTTATAGGTT+TGG - chr3_3:75481538-75481557 None:intergenic 30.0%
TGTCATGTGGTGTAATTTAT+AGG - chr3_3:75481543-75481562 None:intergenic 30.0%
! AAACAACACATTTTGTCATG+TGG - chr3_3:75481556-75481575 None:intergenic 30.0%
TTAATTAACATATGCCCTTG+AGG + chr3_3:75481771-75481790 Msa0472990:intron 30.0%
TAATTAACATATGCCCTTGA+GGG + chr3_3:75481772-75481791 Msa0472990:intron 30.0%
GTTGCATCAGAAAAATAATG+AGG - chr3_3:75482007-75482026 None:intergenic 30.0%
TTTCTGATGCAACCAAAAAA+AGG + chr3_3:75482014-75482033 Msa0472990:intron 30.0%
TATGAATATGTTAGTCGAAG+AGG + chr3_3:75482162-75482181 Msa0472990:intron 30.0%
AGCAAGTAATAGAACACAAA+TGG - chr3_3:75482626-75482645 None:intergenic 30.0%
TATGTAATGAAACTGTGCAA+CGG - chr3_3:75482818-75482837 None:intergenic 30.0%
! TATATTGTTCTGTTTGTTGG+TGG + chr3_3:75483612-75483631 Msa0472990:intron 30.0%
! ATATTGTTCTGTTTGTTGGT+GGG + chr3_3:75483613-75483632 Msa0472990:intron 30.0%
!! TTTGTAGGTATTGCTAGTTT+TGG + chr3_3:75483662-75483681 Msa0472990:intron 30.0%
!!! TTGTAGGTATTGCTAGTTTT+GGG + chr3_3:75483663-75483682 Msa0472990:intron 30.0%
! TTTTCACGGTATAATCACAT+CGG + chr3_3:75483918-75483937 Msa0472990:intron 30.0%
! CGCTTAGCTAAAATGAATTT+TGG + chr3_3:75483974-75483993 Msa0472990:intron 30.0%
!! GTTATAGTTGTTTTATGGGT+AGG + chr3_3:75484027-75484046 Msa0472990:intron 30.0%
!! TCGCATTTTAATCTCTAACT+TGG + chr3_3:75484207-75484226 Msa0472990:intron 30.0%
! TGTTTCTTGTTTGCATAATC+TGG + chr3_3:75484255-75484274 Msa0472990:intron 30.0%
!!! TGTTTGCATAATCTGGTTTT+AGG + chr3_3:75484262-75484281 Msa0472990:intron 30.0%
!!! GTTTGCATAATCTGGTTTTA+GGG + chr3_3:75484263-75484282 Msa0472990:intron 30.0%
!!! TTTGCATAATCTGGTTTTAG+GGG + chr3_3:75484264-75484283 Msa0472990:intron 30.0%
TTAAGGTCAAAAGGCTTAAA+GGG + chr3_3:75484379-75484398 Msa0472990:CDS 30.0%
GAGCGAACATTCTAATAATT+GGG + chr3_3:75484469-75484488 Msa0472990:CDS 30.0%
TGTTATTATCTTGTCTTGCT+TGG + chr3_3:75484569-75484588 Msa0472990:intron 30.0%
AATTCGGAATTAATTGGGAA+GGG + chr3_3:75484687-75484706 Msa0472990:intron 30.0%
TGATGAGAAATTGTCATATG+TGG - chr3_3:75484724-75484743 None:intergenic 30.0%
!!! GATGACATTATTTTGGAAGT+GGG - chr3_3:75484835-75484854 None:intergenic 30.0%
!!! TGATGACATTATTTTGGAAG+TGG - chr3_3:75484836-75484855 None:intergenic 30.0%
GCAAATCAACAATGACTAAA+AGG - chr3_3:75484924-75484943 None:intergenic 30.0%
TTTCAGCTTCACTATCTTAA+AGG - chr3_3:75485337-75485356 None:intergenic 30.0%
TCTTAGTGATGAGATAGAAA+AGG - chr3_3:75485449-75485468 None:intergenic 30.0%
ACTAAGAAATAACTGACCTA+TGG + chr3_3:75485462-75485481 Msa0472990:intron 30.0%
CTAAGAAATAACTGACCTAT+GGG + chr3_3:75485463-75485482 Msa0472990:intron 30.0%
AAGAAACATACTGAATACCT+AGG + chr3_3:75485674-75485693 Msa0472990:intron 30.0%
!! GGATTTTACATTGCTTTTCA+GGG - chr3_3:75485755-75485774 None:intergenic 30.0%
AGGATTTAGTCATATGTATG+AGG - chr3_3:75485804-75485823 None:intergenic 30.0%
ATGACTAAATCCTTGAATCT+TGG + chr3_3:75485811-75485830 Msa0472990:intron 30.0%
AAATTAGGTTCCAAGATTCA+AGG - chr3_3:75485824-75485843 None:intergenic 30.0%
TTGTAGCGATTTAATCACAA+TGG - chr3_3:75485865-75485884 None:intergenic 30.0%
AAATCGCTACAATACTCTAA+TGG + chr3_3:75485873-75485892 Msa0472990:intron 30.0%
! AAGATCTCACTAGTTTAGTT+GGG - chr3_3:75485918-75485937 None:intergenic 30.0%
! AAAGATCTCACTAGTTTAGT+TGG - chr3_3:75485919-75485938 None:intergenic 30.0%
AACTAAACTAGTGAGATCTT+TGG + chr3_3:75485918-75485937 Msa0472990:intron 30.0%
TTATTGGATGAAATCCATGT+AGG - chr3_3:75486105-75486124 None:intergenic 30.0%
CTTAACACTCATTCTCTTAT+TGG - chr3_3:75486121-75486140 None:intergenic 30.0%
GTAAGAATGAGAAATGTGAA+CGG - chr3_3:75486360-75486379 None:intergenic 30.0%
GTTCACATTTCTCATTCTTA+CGG + chr3_3:75486359-75486378 Msa0472990:CDS 30.0%
TATTAGAACGGATAAGACAA+GGG - chr3_3:75486405-75486424 None:intergenic 30.0%
TTATTAGAACGGATAAGACA+AGG - chr3_3:75486406-75486425 None:intergenic 30.0%
CTACTGTTGTAACTCTTTAA+AGG + chr3_3:75486500-75486519 Msa0472990:intron 30.0%
!! TTAGTGCTGACTTAACTAAT+AGG + chr3_3:75486606-75486625 Msa0472990:intron 30.0%
! GTTCAATGTTCATTTTCTTG+GGG + chr3_3:75486645-75486664 Msa0472990:intron 30.0%
GTTAAAATTAGTGAGTGGTT+AGG + chr3_3:75486682-75486701 Msa0472990:intron 30.0%
TCATATTTACTAATGCCCAT+TGG - chr3_3:75486817-75486836 None:intergenic 30.0%
! TGAGGACTAGTATTATACAA+TGG + chr3_3:75487071-75487090 Msa0472990:intron 30.0%
AATCTCTCCAGCATTATTAA+GGG + chr3_3:75487524-75487543 Msa0472990:three_prime_UTR 30.0%
TTAGATTAATCTAATGGCTG+AGG + chr3_3:75487550-75487569 Msa0472990:three_prime_UTR 30.0%
TAGATTAATCTAATGGCTGA+GGG + chr3_3:75487551-75487570 Msa0472990:three_prime_UTR 30.0%
AAAAAAAAGTGAAAGGGAAC+AGG - chr3_3:75487610-75487629 None:intergenic 30.0%
TTAATTCGTCCTAGTTACTC+AGG + chr3_3:75478109-75478128 Msa0472990:five_prime_UTR 35.0%
AAACTTGAACCTGAGTAACT+AGG - chr3_3:75478121-75478140 None:intergenic 35.0%
TCATCCTGTTAGTATAGTTC+AGG + chr3_3:75478576-75478595 Msa0472990:intron 35.0%
AAGACCTGAACTATACTAAC+AGG - chr3_3:75478583-75478602 None:intergenic 35.0%
!! TTCAGGTCTTCTCATTTTTC+TGG + chr3_3:75478593-75478612 Msa0472990:intron 35.0%
AATAGACTCATAAAGGACCT+TGG + chr3_3:75478814-75478833 Msa0472990:intron 35.0%
TACTGTTGTGTTTGATCGAT+CGG - chr3_3:75478868-75478887 None:intergenic 35.0%
TGCATCACATTATTGATGAG+GGG - chr3_3:75478894-75478913 None:intergenic 35.0%
CTGCATCACATTATTGATGA+GGG - chr3_3:75478895-75478914 None:intergenic 35.0%
ATTGTTCCAAGTGTGAGATT+GGG + chr3_3:75478923-75478942 Msa0472990:intron 35.0%
TTCAGCCCATGCATATATAT+GGG + chr3_3:75478971-75478990 Msa0472990:intron 35.0%
TGAATTAATGAGTACTCAGC+AGG - chr3_3:75479012-75479031 None:intergenic 35.0%
AGTCCAAGCACATATACATA+GGG - chr3_3:75479094-75479113 None:intergenic 35.0%
CATACTTACAAAAGAACCTG+AGG - chr3_3:75479197-75479216 None:intergenic 35.0%
ATCTCTTCTAACTTCATCAG+AGG - chr3_3:75479482-75479501 None:intergenic 35.0%
TAACTTGGAAAAGAAAGGGA+GGG + chr3_3:75479746-75479765 Msa0472990:intron 35.0%
GCATCATAAAAAAGTGAGAG+AGG + chr3_3:75480376-75480395 Msa0472990:intron 35.0%
CAGGTGTACTATCTTGATTA+GGG - chr3_3:75481596-75481615 None:intergenic 35.0%
TCAGGTGTACTATCTTGATT+AGG - chr3_3:75481597-75481616 None:intergenic 35.0%
! TGCATGAAAGCATGTACTTA+AGG - chr3_3:75481814-75481833 None:intergenic 35.0%
! ATCGTCTAAGATTACCTTGT+AGG - chr3_3:75482061-75482080 None:intergenic 35.0%
TTGCTCTAATTTCTCTCTCT+AGG + chr3_3:75482358-75482377 Msa0472990:intron 35.0%
TAGGAAGAAAAAGATGAGGA+TGG - chr3_3:75482443-75482462 None:intergenic 35.0%
TGCGAAACTTTACTAACACT+CGG - chr3_3:75482573-75482592 None:intergenic 35.0%
GAGTACTTCCTTACCTTATA+TGG + chr3_3:75482780-75482799 Msa0472990:intron 35.0%
TTCCTTACCTTATATGGTTG+TGG + chr3_3:75482786-75482805 Msa0472990:intron 35.0%
GAAAAAGCCACAACCATATA+AGG - chr3_3:75482796-75482815 None:intergenic 35.0%
! GAACAAAACGTGAGTTGAAA+TGG + chr3_3:75482855-75482874 Msa0472990:exon 35.0%
! AGCACTTTTGTGCAGAAAAT+TGG + chr3_3:75482879-75482898 Msa0472990:CDS 35.0%
! GCACTTTTGTGCAGAAAATT+GGG + chr3_3:75482880-75482899 Msa0472990:CDS 35.0%
ATGTAGGAGAATCCAATTGA+GGG - chr3_3:75482969-75482988 None:intergenic 35.0%
TCAATTGGATTCTCCTACAT+CGG + chr3_3:75482969-75482988 Msa0472990:CDS 35.0%
ATTAGCGAAATTCAAGCTTG+TGG - chr3_3:75483013-75483032 None:intergenic 35.0%
GCTAATTACTTGCAGATTCT+TGG + chr3_3:75483027-75483046 Msa0472990:CDS 35.0%
AAATCTGATCCAGGAATGAA+TGG - chr3_3:75483078-75483097 None:intergenic 35.0%
! ATTCCTGGATCAGATTTTTC+AGG + chr3_3:75483081-75483100 Msa0472990:CDS 35.0%
! ATTGGTAACATTGGAACCAA+CGG - chr3_3:75483118-75483137 None:intergenic 35.0%
! AACACGGAAATTGGTAACAT+TGG - chr3_3:75483127-75483146 None:intergenic 35.0%
AATGTTACCAATTTCCGTGT+TGG + chr3_3:75483126-75483145 Msa0472990:CDS 35.0%
! TATTGTTCTGTTTGTTGGTG+GGG + chr3_3:75483614-75483633 Msa0472990:intron 35.0%
! TGCAAATTGGAAAAGCATGT+GGG + chr3_3:75483715-75483734 Msa0472990:CDS 35.0%
AAGAGTTCCTTAAGGTCAAA+AGG + chr3_3:75484370-75484389 Msa0472990:CDS 35.0%
! CTTTAAGCCTTTTGACCTTA+AGG - chr3_3:75484380-75484399 None:intergenic 35.0%
CTTAAGGTCAAAAGGCTTAA+AGG + chr3_3:75484378-75484397 Msa0472990:CDS 35.0%
AGCTCATGAAAGAATCTTTG+CGG + chr3_3:75484433-75484452 Msa0472990:CDS 35.0%
GGAGCGAACATTCTAATAAT+TGG + chr3_3:75484468-75484487 Msa0472990:CDS 35.0%
CTAATAATTGGGTTTGCAAG+TGG + chr3_3:75484480-75484499 Msa0472990:CDS 35.0%
TAACAAGAGCTATGTTAGCA+GGG - chr3_3:75484521-75484540 None:intergenic 35.0%
TTAACAAGAGCTATGTTAGC+AGG - chr3_3:75484522-75484541 None:intergenic 35.0%
TGCTAACATAGCTCTTGTTA+AGG + chr3_3:75484521-75484540 Msa0472990:CDS 35.0%
! GGTACATCAGGAATAGATTT+TGG + chr3_3:75484542-75484561 Msa0472990:intron 35.0%
AGATCAAGCAACAAACAATC+AGG - chr3_3:75484613-75484632 None:intergenic 35.0%
CAATTCGGAATTAATTGGGA+AGG + chr3_3:75484686-75484705 Msa0472990:intron 35.0%
ATTCGGAATTAATTGGGAAG+GGG + chr3_3:75484688-75484707 Msa0472990:intron 35.0%
CAAAAGCAACAGTCATGATA+TGG - chr3_3:75484789-75484808 None:intergenic 35.0%
!!! CATTGATTTTCACTTGACAG+TGG - chr3_3:75485005-75485024 None:intergenic 35.0%
AAATCTAGCAAACTGTGAAG+CGG - chr3_3:75485233-75485252 None:intergenic 35.0%
!!! CTTCACAGTTTGCTAGATTT+TGG + chr3_3:75485233-75485252 Msa0472990:intron 35.0%
CATGTTGCAATAATACATGC+AGG - chr3_3:75485290-75485309 None:intergenic 35.0%
AGTAACGGTAGTATTTAAGC+AGG - chr3_3:75485363-75485382 None:intergenic 35.0%
! CATCATACTGGCATTTTGTT+TGG - chr3_3:75485422-75485441 None:intergenic 35.0%
AGAAAAGGACTACATCATAC+TGG - chr3_3:75485434-75485453 None:intergenic 35.0%
TCTACACACACCTACATATT+TGG + chr3_3:75485510-75485529 Msa0472990:intron 35.0%
!!! CTGGGGAATTTTTAGTTATC+TGG + chr3_3:75485568-75485587 Msa0472990:intron 35.0%
!!! GGAATTTTTAGTTATCTGGC+TGG + chr3_3:75485572-75485591 Msa0472990:intron 35.0%
AGTATGTTTCTTAGATGTCG+TGG - chr3_3:75485666-75485685 None:intergenic 35.0%
AAACATACTGAATACCTAGG+TGG + chr3_3:75485677-75485696 Msa0472990:intron 35.0%
AACATACTGAATACCTAGGT+GGG + chr3_3:75485678-75485697 Msa0472990:intron 35.0%
!! GGGATTTTACATTGCTTTTC+AGG - chr3_3:75485756-75485775 None:intergenic 35.0%
! TTGGATCTGCAAACTTTTGT+TGG + chr3_3:75485937-75485956 Msa0472990:intron 35.0%
TAAATATGCAATGTGGGCAA+GGG - chr3_3:75485975-75485994 None:intergenic 35.0%
TTATTGAGTGAATCCCATGT+GGG + chr3_3:75486039-75486058 Msa0472990:intron 35.0%
AAAATGGATCCCACATAAAG+TGG - chr3_3:75486070-75486089 None:intergenic 35.0%
TAGGTCTCACACTTAGAAAA+TGG - chr3_3:75486086-75486105 None:intergenic 35.0%
GAACTAACATAAGAGAGCTT+TGG - chr3_3:75486165-75486184 None:intergenic 35.0%
!! TATGTTAGTTCTGCTATAGC+TGG + chr3_3:75486174-75486193 Msa0472990:intron 35.0%
TAAAATCACTCTGGCAGAAT+TGG + chr3_3:75486231-75486250 Msa0472990:intron 35.0%
GACAGTACATGGACTTTATT+GGG + chr3_3:75486253-75486272 Msa0472990:CDS 35.0%
ACAGTACATGGACTTTATTG+GGG + chr3_3:75486254-75486273 Msa0472990:CDS 35.0%
TGTTCTTGAAGATTCTCTCA+AGG + chr3_3:75486301-75486320 Msa0472990:CDS 35.0%
GGATAAATCAGCATGTTTAC+TGG + chr3_3:75486571-75486590 Msa0472990:intron 35.0%
ACCAGGTTAAAATTAGTGAG+TGG + chr3_3:75486677-75486696 Msa0472990:intron 35.0%
!! ACCACTCACTAATTTTAACC+TGG - chr3_3:75486681-75486700 None:intergenic 35.0%
TTGTGACATCAATGACCAAT+GGG + chr3_3:75486799-75486818 Msa0472990:intron 35.0%
ACTTGGGTCATTATAACAGT+TGG + chr3_3:75486959-75486978 Msa0472990:intron 35.0%
AGGCAAATGATACAAACTAC+TGG - chr3_3:75487030-75487049 None:intergenic 35.0%
TGAACATCAATGGAGCATAT+AGG - chr3_3:75487050-75487069 None:intergenic 35.0%
TAGTCCTCATTGAACATCAA+TGG - chr3_3:75487060-75487079 None:intergenic 35.0%
TATAGCTTTCCTATCTCTGA+TGG - chr3_3:75487141-75487160 None:intergenic 35.0%
ATCAGAGATAGGAAAGCTAT+AGG + chr3_3:75487140-75487159 Msa0472990:CDS 35.0%
TCAGAGATAGGAAAGCTATA+GGG + chr3_3:75487141-75487160 Msa0472990:CDS 35.0%
TATGCTCGACTAATATCTTC+TGG + chr3_3:75487228-75487247 Msa0472990:three_prime_UTR 35.0%
ATGCTCGACTAATATCTTCT+GGG + chr3_3:75487229-75487248 Msa0472990:three_prime_UTR 35.0%
TAGGTTCATATTAGAGACCA+AGG + chr3_3:75487265-75487284 Msa0472990:three_prime_UTR 35.0%
TTTGTATACTAGCATCTCCT+TGG - chr3_3:75487285-75487304 None:intergenic 35.0%
AGGAGATGCTAGTATACAAA+AGG + chr3_3:75487285-75487304 Msa0472990:three_prime_UTR 35.0%
GCATCTATTCTACAACAGTT+TGG - chr3_3:75487329-75487348 None:intergenic 35.0%
AATAGTTCCCAATAAGCACA+CGG + chr3_3:75487474-75487493 Msa0472990:three_prime_UTR 35.0%
AATAATGCTGGAGAGATTGA+TGG - chr3_3:75487522-75487541 None:intergenic 35.0%
CAATCTCTCCAGCATTATTA+AGG + chr3_3:75487523-75487542 Msa0472990:three_prime_UTR 35.0%
ATCTCTCCAGCATTATTAAG+GGG + chr3_3:75487525-75487544 Msa0472990:three_prime_UTR 35.0%
! ACATACCAGCTTAGGTTTTC+TGG + chr3_3:75478059-75478078 Msa0472990:five_prime_UTR 40.0%
! CAAGTTCCATATTTTGCGTG+CGG + chr3_3:75478764-75478783 Msa0472990:intron 40.0%
! AAGTTCCATATTTTGCGTGC+GGG + chr3_3:75478765-75478784 Msa0472990:intron 40.0%
GCTGCATCACATTATTGATG+AGG - chr3_3:75478896-75478915 None:intergenic 40.0%
GATTGTTCCAAGTGTGAGAT+TGG + chr3_3:75478922-75478941 Msa0472990:intron 40.0%
! CATATATATGCATGGGCTGA+AGG - chr3_3:75478972-75478991 None:intergenic 40.0%
CTTCAGCCCATGCATATATA+TGG + chr3_3:75478970-75478989 Msa0472990:intron 40.0%
GATCCCTATGTATATGTGCT+TGG + chr3_3:75479088-75479107 Msa0472990:intron 40.0%
CAGTCCAAGCACATATACAT+AGG - chr3_3:75479095-75479114 None:intergenic 40.0%
TGTATATGTGCTTGGACTGA+AGG + chr3_3:75479096-75479115 Msa0472990:intron 40.0%
GTATATGTGCTTGGACTGAA+GGG + chr3_3:75479097-75479116 Msa0472990:intron 40.0%
TATATGTGCTTGGACTGAAG+GGG + chr3_3:75479098-75479117 Msa0472990:intron 40.0%
!! GAAAGTATTGTCGTCCATTG+TGG - chr3_3:75479407-75479426 None:intergenic 40.0%
CTAACTTGGAAAAGAAAGGG+AGG + chr3_3:75479745-75479764 Msa0472990:intron 40.0%
!! GCAAATGCCTCGGTTATTTT+AGG - chr3_3:75479832-75479851 None:intergenic 40.0%
! TTTCATATAAGTGGGGTGTC+TGG + chr3_3:75479954-75479973 Msa0472990:intron 40.0%
! TTCATATAAGTGGGGTGTCT+GGG + chr3_3:75479955-75479974 Msa0472990:intron 40.0%
ATTATTATATGCAGGGGCTG+GGG - chr3_3:75479988-75480007 None:intergenic 40.0%
CATTATTATATGCAGGGGCT+GGG - chr3_3:75479989-75480008 None:intergenic 40.0%
!! CGTTGATGCTCCTTTTAACT+AGG - chr3_3:75480483-75480502 None:intergenic 40.0%
! TTTTGCTAGCCAGTATCCTA+AGG + chr3_3:75480765-75480784 Msa0472990:intron 40.0%
TTTGCTAGCCAGTATCCTAA+GGG + chr3_3:75480766-75480785 Msa0472990:intron 40.0%
ATTCATTAACCACTGCCCTT+AGG - chr3_3:75480784-75480803 None:intergenic 40.0%
GTAAGCTGTTACAATTGACC+AGG + chr3_3:75480833-75480852 Msa0472990:intron 40.0%
TTGCTTAACCAATGCCCTTA+GGG + chr3_3:75480898-75480917 Msa0472990:intron 40.0%
AATGTTAACCAGTGCCCTAA+GGG - chr3_3:75480915-75480934 None:intergenic 40.0%
GTGACCCTTATAGATAATCG+TGG + chr3_3:75481416-75481435 Msa0472990:intron 40.0%
ATTGCTCGTAAATCATGGTC+AGG - chr3_3:75481615-75481634 None:intergenic 40.0%
GCTACATTGCTCGTAAATCA+TGG - chr3_3:75481620-75481639 None:intergenic 40.0%
!! ATGTTAACTTGTGCCCTCAA+GGG - chr3_3:75481788-75481807 None:intergenic 40.0%
!! AATGTTAACTTGTGCCCTCA+AGG - chr3_3:75481789-75481808 None:intergenic 40.0%
GTACATGCTTTCATGCATAG+AGG + chr3_3:75481817-75481836 Msa0472990:intron 40.0%
AGTTTGCATGCACTTCTTTG+CGG + chr3_3:75481849-75481868 Msa0472990:intron 40.0%
ATCTTCCTCGTTATCCTACA+AGG + chr3_3:75482044-75482063 Msa0472990:intron 40.0%
GATTACCTTGTAGGATAACG+AGG - chr3_3:75482052-75482071 None:intergenic 40.0%
AGCCACAACCATATAAGGTA+AGG - chr3_3:75482791-75482810 None:intergenic 40.0%
GAGAATCCAATTGAGGGATA+GGG - chr3_3:75482963-75482982 None:intergenic 40.0%
GATGTAGGAGAATCCAATTG+AGG - chr3_3:75482970-75482989 None:intergenic 40.0%
ATCCTAACTCTAACCGATGT+AGG - chr3_3:75482985-75483004 None:intergenic 40.0%
ATGCCTGAAAAATCTGATCC+AGG - chr3_3:75483087-75483106 None:intergenic 40.0%
AACAAACAGGATCACCAACA+CGG - chr3_3:75483143-75483162 None:intergenic 40.0%
ATAAGATCCAAGAGCAGCAA+AGG - chr3_3:75483166-75483185 None:intergenic 40.0%
! ATAAACGGGAAGAGGAGTAT+CGG - chr3_3:75483229-75483248 None:intergenic 40.0%
CATAGAGCTCAGTTGAAATC+TGG + chr3_3:75483540-75483559 Msa0472990:CDS 40.0%
TTGGTGGGGTTAAGTTATGT+GGG + chr3_3:75483628-75483647 Msa0472990:intron 40.0%
TGGGTTGTGGAATTGTTTGT+AGG + chr3_3:75483647-75483666 Msa0472990:intron 40.0%
! GTGCAAATTGGAAAAGCATG+TGG + chr3_3:75483714-75483733 Msa0472990:CDS 40.0%
! GCAAATTGGAAAAGCATGTG+GGG + chr3_3:75483716-75483735 Msa0472990:CDS 40.0%
! CTATTGTCATTGCTGTTGCT+AGG + chr3_3:75483739-75483758 Msa0472990:CDS 40.0%
ATGCCATTATGCCTTTGAGT+TGG + chr3_3:75483791-75483810 Msa0472990:intron 40.0%
! TGCCATTATGCCTTTGAGTT+GGG + chr3_3:75483792-75483811 Msa0472990:intron 40.0%
! AACCCAACTCAAAGGCATAA+TGG - chr3_3:75483797-75483816 None:intergenic 40.0%
CCAAAATGAACCCAACTCAA+AGG - chr3_3:75483805-75483824 None:intergenic 40.0%
!!! CCTTTGAGTTGGGTTCATTT+TGG + chr3_3:75483802-75483821 Msa0472990:intron 40.0%
ACATAGGCTAAGAAGCTCAT+GGG - chr3_3:75483842-75483861 None:intergenic 40.0%
AACATAGGCTAAGAAGCTCA+TGG - chr3_3:75483843-75483862 None:intergenic 40.0%
ATCTCTAACTTGGTATCCCT+TGG + chr3_3:75484217-75484236 Msa0472990:intron 40.0%
ACTCAACTCCAACTTTCCAA+GGG - chr3_3:75484236-75484255 None:intergenic 40.0%
GTGCAGCTCTTGAAATCAAT+GGG + chr3_3:75484297-75484316 Msa0472990:CDS 40.0%
!! ATCAATGGGTGTTGATCATG+TGG + chr3_3:75484311-75484330 Msa0472990:CDS 40.0%
GAGTGTGAAAGAGTTCCTTA+AGG + chr3_3:75484362-75484381 Msa0472990:CDS 40.0%
! AATCTTTGCGGCTTCTGAAA+TGG + chr3_3:75484445-75484464 Msa0472990:CDS 40.0%
!! ATCTTTGCGGCTTCTGAAAT+GGG + chr3_3:75484446-75484465 Msa0472990:CDS 40.0%
AGCTCTTGTTAAGGTACATC+AGG + chr3_3:75484530-75484549 Msa0472990:intron 40.0%
!! TTAATTGGGAAGGGGTATCA+AGG + chr3_3:75484696-75484715 Msa0472990:intron 40.0%
!! TAATTGGGAAGGGGTATCAA+GGG + chr3_3:75484697-75484716 Msa0472990:intron 40.0%
!!! TGACTGTTGCTTTTGCTGTT+CGG + chr3_3:75484794-75484813 Msa0472990:intron 40.0%
!! TCATTGTTGATTTGCTGACG+AGG + chr3_3:75484929-75484948 Msa0472990:intron 40.0%
!! CATTGTTGATTTGCTGACGA+GGG + chr3_3:75484930-75484949 Msa0472990:intron 40.0%
! ATGGGAAGAGAATTTTGAGC+AGG + chr3_3:75485074-75485093 Msa0472990:intron 40.0%
!!! GCAGGCTGTTAGTTTTTTCA+AGG - chr3_3:75485272-75485291 None:intergenic 40.0%
!!! CTGGCATTTTGTTTGGCTTT+TGG - chr3_3:75485415-75485434 None:intergenic 40.0%
!! CAACTTTGGAATAGACCCAT+AGG - chr3_3:75485481-75485500 None:intergenic 40.0%
GTAAATATGCAATGTGGGCA+AGG - chr3_3:75485976-75485995 None:intergenic 40.0%
CTTATTGAGTGAATCCCATG+TGG + chr3_3:75486038-75486057 Msa0472990:intron 40.0%
TTCTAAGTGTGAGACCTACA+TGG + chr3_3:75486088-75486107 Msa0472990:intron 40.0%
GGACAGTACATGGACTTTAT+TGG + chr3_3:75486252-75486271 Msa0472990:CDS 40.0%
GAGAATCTTCAAGAACAGCT+GGG - chr3_3:75486298-75486317 None:intergenic 40.0%
AGAGAATCTTCAAGAACAGC+TGG - chr3_3:75486299-75486318 None:intergenic 40.0%
AAATTAGTGAGTGGTTAGGG+TGG + chr3_3:75486686-75486705 Msa0472990:intron 40.0%
AATTAGTGAGTGGTTAGGGT+GGG + chr3_3:75486687-75486706 Msa0472990:intron 40.0%
CTTGTGACATCAATGACCAA+TGG + chr3_3:75486798-75486817 Msa0472990:intron 40.0%
TGCTCCATTGATGTTCAATG+AGG + chr3_3:75487053-75487072 Msa0472990:intron 40.0%
AGATAGGAAAGCTATAGGGA+AGG + chr3_3:75487145-75487164 Msa0472990:CDS 40.0%
GATTCACGCGAATTGCAATT+TGG + chr3_3:75487374-75487393 Msa0472990:three_prime_UTR 40.0%
! GGGGCGTTAGATTAATCTAA+TGG + chr3_3:75487544-75487563 Msa0472990:three_prime_UTR 40.0%
CGCACGCAAAATATGGAACT+TGG - chr3_3:75478766-75478785 None:intergenic 45.0%
TTCTCTCCCAATCTCACACT+TGG - chr3_3:75478932-75478951 None:intergenic 45.0%
TTGGGAGAGAAAGAGAGTGA+AGG + chr3_3:75478941-75478960 Msa0472990:intron 45.0%
TGGGAGAGAAAGAGAGTGAA+GGG + chr3_3:75478942-75478961 Msa0472990:intron 45.0%
ATGGAGACAGCAGAGAAAGA+AGG - chr3_3:75479128-75479147 None:intergenic 45.0%
CAGATGCTATAGCCGAATGT+TGG - chr3_3:75479256-75479275 None:intergenic 45.0%
TCACGCACTACTTCCTTATC+AGG + chr3_3:75479375-75479394 Msa0472990:intron 45.0%
CACGCACTACTTCCTTATCA+GGG + chr3_3:75479376-75479395 Msa0472990:intron 45.0%
CACTACTTCCTTATCAGGGT+GGG + chr3_3:75479380-75479399 Msa0472990:intron 45.0%
TTGGAAAAGAAAGGGAGGGT+TGG + chr3_3:75479750-75479769 Msa0472990:intron 45.0%
! GGGAGGGTTGGATGATTTTA+TGG + chr3_3:75479762-75479781 Msa0472990:intron 45.0%
!!! CCTCGGTTATTTTAGGACGA+AGG - chr3_3:75479825-75479844 None:intergenic 45.0%
CCTTCGTCCTAAAATAACCG+AGG + chr3_3:75479822-75479841 Msa0472990:intron 45.0%
! TCATATAAGTGGGGTGTCTG+GGG + chr3_3:75479956-75479975 Msa0472990:intron 45.0%
GCATTATTATATGCAGGGGC+TGG - chr3_3:75479990-75480009 None:intergenic 45.0%
GTTGCTTAACCAATGCCCTT+AGG + chr3_3:75480897-75480916 Msa0472990:intron 45.0%
GAATGTTAACCAGTGCCCTA+AGG - chr3_3:75480916-75480935 None:intergenic 45.0%
GAAGATCGTCGAAATCACGA+AGG - chr3_3:75482551-75482570 None:intergenic 45.0%
CAGAAAATTGGGTGACCCAA+CGG + chr3_3:75482891-75482910 Msa0472990:CDS 45.0%
TTGAGGGATAGGGTGATTCT+TGG - chr3_3:75482953-75482972 None:intergenic 45.0%
GAATCACCCTATCCCTCAAT+TGG + chr3_3:75482954-75482973 Msa0472990:CDS 45.0%
GGAGAATCCAATTGAGGGAT+AGG - chr3_3:75482964-75482983 None:intergenic 45.0%
! CTCCTACATCGGTTAGAGTT+AGG + chr3_3:75482980-75482999 Msa0472990:CDS 45.0%
!! GCAGATTCTTGGAAAGTACC+AGG + chr3_3:75483038-75483057 Msa0472990:CDS 45.0%
GATCCAGGAATGAATGGCAA+AGG - chr3_3:75483072-75483091 None:intergenic 45.0%
AGGATCACCAACACGGAAAT+TGG - chr3_3:75483136-75483155 None:intergenic 45.0%
AGAGCAGCAAAGGAACAAAC+AGG - chr3_3:75483156-75483175 None:intergenic 45.0%
GTTTGTTCCTTTGCTGCTCT+TGG + chr3_3:75483156-75483175 Msa0472990:CDS 45.0%
AATTTGTAGGTTTCGCGTGC+CGG + chr3_3:75483449-75483468 Msa0472990:intron 45.0%
GCATTTGGCACTTCACATGT+TGG + chr3_3:75483510-75483529 Msa0472990:CDS 45.0%
AGCTCAGTTGAAATCTGGTC+AGG + chr3_3:75483545-75483564 Msa0472990:CDS 45.0%
! GTTGGTGGGGTTAAGTTATG+TGG + chr3_3:75483627-75483646 Msa0472990:intron 45.0%
! GGGTTAAGTTATGTGGGTTG+TGG + chr3_3:75483634-75483653 Msa0472990:intron 45.0%
GGCAACGTGAATGCAAACAT+AGG - chr3_3:75483858-75483877 None:intergenic 45.0%
AGCAGTTGCTAAATGTGCTG+CGG - chr3_3:75483879-75483898 None:intergenic 45.0%
CTTGGTATCCCTTGGAAAGT+TGG + chr3_3:75484225-75484244 Msa0472990:intron 45.0%
CACTCAACTCCAACTTTCCA+AGG - chr3_3:75484237-75484256 None:intergenic 45.0%
!!! TGGTTTTAGGGGAGCTGAAA+AGG + chr3_3:75484275-75484294 Msa0472990:intron 45.0%
GGTGCAGCTCTTGAAATCAA+TGG + chr3_3:75484296-75484315 Msa0472990:CDS 45.0%
!! AATGGGTGTTGATCATGTGG+TGG + chr3_3:75484314-75484333 Msa0472990:CDS 45.0%
!! TGTTGATCATGTGGTGGACT+TGG + chr3_3:75484320-75484339 Msa0472990:CDS 45.0%
!! GTTGATCATGTGGTGGACTT+GGG + chr3_3:75484321-75484340 Msa0472990:CDS 45.0%
!! TCTTTGCGGCTTCTGAAATG+GGG + chr3_3:75484447-75484466 Msa0472990:CDS 45.0%
AGTTACATGGACCCGTAGTA+GGG + chr3_3:75484855-75484874 Msa0472990:intron 45.0%
ATGAAACTGAGAGCTGAGAC+TGG + chr3_3:75485549-75485568 Msa0472990:intron 45.0%
TGAAACTGAGAGCTGAGACT+GGG + chr3_3:75485550-75485569 Msa0472990:intron 45.0%
ACTGAATACCTAGGTGGGTA+AGG + chr3_3:75485683-75485702 Msa0472990:intron 45.0%
TAAAGTGGTGAGACCCACAT+GGG - chr3_3:75486055-75486074 None:intergenic 45.0%
ATAAAGTGGTGAGACCCACA+TGG - chr3_3:75486056-75486075 None:intergenic 45.0%
TGGGTCTCACCACTTTATGT+GGG + chr3_3:75486058-75486077 Msa0472990:intron 45.0%
TGGCAGAATTGGACAGTACA+TGG + chr3_3:75486242-75486261 Msa0472990:intron 45.0%
CTACTGTCTTGGTTGGCAAA+AGG + chr3_3:75486326-75486345 Msa0472990:CDS 45.0%
!! CATGTTTACTGGCCTTGTTC+AGG + chr3_3:75486582-75486601 Msa0472990:intron 45.0%
GTCAGCACTAAACCTGAACA+AGG - chr3_3:75486597-75486616 None:intergenic 45.0%
TCTTGGGGTTCTATTTGACC+AGG + chr3_3:75486660-75486679 Msa0472990:intron 45.0%
TCTGGGCACTCAAACATCAT+AGG + chr3_3:75487246-75487265 Msa0472990:three_prime_UTR 45.0%
AGAGGATCCGTGTGCTTATT+GGG - chr3_3:75487484-75487503 None:intergenic 45.0%
AGAGATTGATGGAGAGAGCA+CGG - chr3_3:75487511-75487530 None:intergenic 45.0%
CTAACGCCCCTTAATAATGC+TGG - chr3_3:75487534-75487553 None:intergenic 45.0%
!! AAAATTTATTTGAAAAATAT+TGG + chr3_3:75478622-75478641 Msa0472990:intron 5.0%
!! TACATTAATTAAAATATAAA+AGG + chr3_3:75478668-75478687 Msa0472990:intron 5.0%
!! ACATTAATTAAAATATAAAA+GGG + chr3_3:75478669-75478688 Msa0472990:intron 5.0%
!! TAATTAATTATAAATAAGTA+AGG + chr3_3:75481021-75481040 Msa0472990:intron 5.0%
!!! ATATTTTTTAACTTTATTTT+TGG - chr3_3:75482140-75482159 None:intergenic 5.0%
!!! ATAGTTTTTATTTTAATTTT+TGG - chr3_3:75482328-75482347 None:intergenic 5.0%
!! AAATTTAAACTAAAAAAATA+GGG - chr3_3:75486927-75486946 None:intergenic 5.0%
!!! TAAAAGTTATTATAATTTTT+TGG + chr3_3:75487436-75487455 Msa0472990:three_prime_UTR 5.0%
TGCTGCCAGAAAACCTAAGC+TGG - chr3_3:75478067-75478086 None:intergenic 50.0%
ACACACCCGCACGCAAAATA+TGG - chr3_3:75478773-75478792 None:intergenic 50.0%
GGGAGAGAAAGAGAGTGAAG+GGG + chr3_3:75478943-75478962 Msa0472990:intron 50.0%
TGAGTACTCAGCAGGTACAG+TGG - chr3_3:75479004-75479023 None:intergenic 50.0%
TTCGGCTATAGCATCTGCAC+AGG + chr3_3:75479259-75479278 Msa0472990:intron 50.0%
TCGGCTATAGCATCTGCACA+GGG + chr3_3:75479260-75479279 Msa0472990:intron 50.0%
! AGGGCAGTGACTGCGATTTT+GGG + chr3_3:75479279-75479298 Msa0472990:intron 50.0%
GCACTACTTCCTTATCAGGG+TGG + chr3_3:75479379-75479398 Msa0472990:intron 50.0%
ATTGTGGTCCCACCCTGATA+AGG - chr3_3:75479391-75479410 None:intergenic 50.0%
TTATCAGGGTGGGACCACAA+TGG + chr3_3:75479390-75479409 Msa0472990:intron 50.0%
AACCACTGCCCTTAGGATAC+TGG - chr3_3:75480777-75480796 None:intergenic 50.0%
ATGGCAAAGGAGGTTTCTCC+TGG - chr3_3:75483059-75483078 None:intergenic 50.0%
CCAGGAATGAATGGCAAAGG+AGG - chr3_3:75483069-75483088 None:intergenic 50.0%
CCTCCTTTGCCATTCATTCC+TGG + chr3_3:75483066-75483085 Msa0472990:CDS 50.0%
!! TCAGGCATCGTTGATTCCGT+TGG + chr3_3:75483099-75483118 Msa0472990:CDS 50.0%
GCAACCAAATCACAACCCTC+CGG - chr3_3:75483471-75483490 None:intergenic 50.0%
!! GGTTGTGATTTGGTTGCTGC+TGG + chr3_3:75483474-75483493 Msa0472990:CDS 50.0%
!!! TTGCTAGTTTTGGGTGCAGC+AGG + chr3_3:75483672-75483691 Msa0472990:CDS 50.0%
GGTCTTGCAGCTGTGCAAAT+TGG + chr3_3:75483702-75483721 Msa0472990:CDS 50.0%
GATGTCCTGTATGACCCAGT+AGG + chr3_3:75484405-75484424 Msa0472990:CDS 50.0%
TCATGAGCTTGCCTCCTACT+GGG - chr3_3:75484422-75484441 None:intergenic 50.0%
TTCATGAGCTTGCCTCCTAC+TGG - chr3_3:75484423-75484442 None:intergenic 50.0%
GCTATGTTAGCAGGGATGAC+AGG - chr3_3:75484513-75484532 None:intergenic 50.0%
CAGTTACATGGACCCGTAGT+AGG + chr3_3:75484854-75484873 Msa0472990:intron 50.0%
GAAACTGAGAGCTGAGACTG+GGG + chr3_3:75485551-75485570 Msa0472990:intron 50.0%
TGAGAGAACCTTACCCACCT+AGG - chr3_3:75485694-75485713 None:intergenic 50.0%
GTGGGTCTCACCACTTTATG+TGG + chr3_3:75486057-75486076 Msa0472990:intron 50.0%
CTCTCAAGGAGCTACTGTCT+TGG + chr3_3:75486315-75486334 Msa0472990:CDS 50.0%
CAAGGAGCTACTGTCTTGGT+TGG + chr3_3:75486319-75486338 Msa0472990:CDS 50.0%
TCATTCTTACGGCCTGTCAG+AGG + chr3_3:75486370-75486389 Msa0472990:CDS 50.0%
! GGGATTTTCTGACCTCTGAC+AGG - chr3_3:75486385-75486404 None:intergenic 50.0%
AGTGGTTAGGGTGGGAAAGT+TGG + chr3_3:75486695-75486714 Msa0472990:intron 50.0%
CCTATCTCTGATGGCAGTGA+AGG - chr3_3:75487132-75487151 None:intergenic 50.0%
CCTTCACTGCCATCAGAGAT+AGG + chr3_3:75487129-75487148 Msa0472990:CDS 50.0%
GAGAGGATCCGTGTGCTTAT+TGG - chr3_3:75487485-75487504 None:intergenic 50.0%
! ATTGATGGAGAGAGCACGGA+AGG - chr3_3:75487507-75487526 None:intergenic 50.0%
! CAGGGCAGTGACTGCGATTT+TGG + chr3_3:75479278-75479297 Msa0472990:intron 55.0%
AGCCAGTATCCTAAGGGCAG+TGG + chr3_3:75480772-75480791 Msa0472990:intron 55.0%
AACCAATGCCCTTAGGGCAC+TGG + chr3_3:75480904-75480923 Msa0472990:intron 55.0%
! AACCAGTGCCCTAAGGGCAT+TGG - chr3_3:75480909-75480928 None:intergenic 55.0%
CGTCTTCAACGCTCACCGTT+GGG - chr3_3:75482909-75482928 None:intergenic 55.0%
TCGTCTTCAACGCTCACCGT+TGG - chr3_3:75482910-75482929 None:intergenic 55.0%
!! GGAGCACTTGCTGTGGCATT+TGG + chr3_3:75483495-75483514 Msa0472990:CDS 55.0%
!!! CTAGTTTTGGGTGCAGCAGG+AGG + chr3_3:75483675-75483694 Msa0472990:CDS 55.0%
GTCCTGTATGACCCAGTAGG+AGG + chr3_3:75484408-75484427 Msa0472990:CDS 55.0%
TGCCTCCTACTGGGTCATAC+AGG - chr3_3:75484413-75484432 None:intergenic 55.0%
TGGGTCTGCTAGCCCTACTA+CGG - chr3_3:75484870-75484889 None:intergenic 55.0%
TTGTAGGTTTCGCGTGCCGG+AGG + chr3_3:75483452-75483471 Msa0472990:intron 60.0%
TGTAGGTTTCGCGTGCCGGA+GGG + chr3_3:75483453-75483472 Msa0472990:intron 60.0%
CGTGCCGGAGGGTTGTGATT+TGG + chr3_3:75483464-75483483 Msa0472990:CDS 60.0%
! TGCTGCTGGAGCACTTGCTG+TGG + chr3_3:75483488-75483507 Msa0472990:CDS 60.0%
TTTGGGTGCAGCAGGAGGTG+TGG + chr3_3:75483680-75483699 Msa0472990:CDS 60.0%
! TTGGGTGCAGCAGGAGGTGT+GGG + chr3_3:75483681-75483700 Msa0472990:CDS 60.0%
GGGTCTGCTAGCCCTACTAC+GGG - chr3_3:75484869-75484888 None:intergenic 60.0%
GATGGCAGTGAAGGCGAGGT+TGG - chr3_3:75487123-75487142 None:intergenic 60.0%
CTCTGATGGCAGTGAAGGCG+AGG - chr3_3:75487127-75487146 None:intergenic 60.0%
AGAGAGATGTGCAGCACGCG+TGG - chr3_3:75487403-75487422 None:intergenic 60.0%
! TGGAGAGAGCACGGAAGGAG+AGG - chr3_3:75487502-75487521 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 75478051 75487740 75478051 ID=Msa0472990;Name=Msa0472990
chr3_3 mRNA 75478051 75487740 75478051 ID=Msa0472990-mRNA-1;Parent=Msa0472990;Name=Msa0472990-mRNA-1;_AED=0.08;_eAED=0.08;_QI=128|1|1|1|0.83|0.71|7|529|346
chr3_3 exon 75478051 75478130 75478051 ID=Msa0472990-mRNA-1:exon:19539;Parent=Msa0472990-mRNA-1
chr3_3 exon 75482826 75483217 75482826 ID=Msa0472990-mRNA-1:exon:19540;Parent=Msa0472990-mRNA-1
chr3_3 exon 75483458 75483566 75483458 ID=Msa0472990-mRNA-1:exon:19541;Parent=Msa0472990-mRNA-1
chr3_3 exon 75483669 75483760 75483669 ID=Msa0472990-mRNA-1:exon:19542;Parent=Msa0472990-mRNA-1
chr3_3 exon 75484284 75484542 75484284 ID=Msa0472990-mRNA-1:exon:19543;Parent=Msa0472990-mRNA-1
chr3_3 exon 75486248 75486391 75486248 ID=Msa0472990-mRNA-1:exon:19544;Parent=Msa0472990-mRNA-1
chr3_3 exon 75487119 75487740 75487119 ID=Msa0472990-mRNA-1:exon:19545;Parent=Msa0472990-mRNA-1
chr3_3 five_prime_UTR 75478051 75478130 75478051 ID=Msa0472990-mRNA-1:five_prime_utr;Parent=Msa0472990-mRNA-1
chr3_3 five_prime_UTR 75482826 75482873 75482826 ID=Msa0472990-mRNA-1:five_prime_utr;Parent=Msa0472990-mRNA-1
chr3_3 CDS 75482874 75483217 75482874 ID=Msa0472990-mRNA-1:cds;Parent=Msa0472990-mRNA-1
chr3_3 CDS 75483458 75483566 75483458 ID=Msa0472990-mRNA-1:cds;Parent=Msa0472990-mRNA-1
chr3_3 CDS 75483669 75483760 75483669 ID=Msa0472990-mRNA-1:cds;Parent=Msa0472990-mRNA-1
chr3_3 CDS 75484284 75484542 75484284 ID=Msa0472990-mRNA-1:cds;Parent=Msa0472990-mRNA-1
chr3_3 CDS 75486248 75486391 75486248 ID=Msa0472990-mRNA-1:cds;Parent=Msa0472990-mRNA-1
chr3_3 CDS 75487119 75487211 75487119 ID=Msa0472990-mRNA-1:cds;Parent=Msa0472990-mRNA-1
chr3_3 three_prime_UTR 75487212 75487740 75487212 ID=Msa0472990-mRNA-1:three_prime_utr;Parent=Msa0472990-mRNA-1
Gene Sequence

>Msa0472990

ATGGAAGCACTTTTGTGCAGAAAATTGGGTGACCCAACGGTGAGCGTTGAAGACGAAAACAGCCCAATAATCATATCCAAGAATCACCCTATCCCTCAATTGGATTCTCCTACATCGGTTAGAGTTAGGATCAAAGCCACAAGCTTGAATTTCGCTAATTACTTGCAGATTCTTGGAAAGTACCAGGAGAAACCTCCTTTGCCATTCATTCCTGGATCAGATTTTTCAGGCATCGTTGATTCCGTTGGTTCCAATGTTACCAATTTCCGTGTTGGTGATCCTGTTTGTTCCTTTGCTGCTCTTGGATCTTATGCTCAGTATGTAGTTGTTGATCAGACTCAATTGTTTCGCGTGCCGGAGGGTTGTGATTTGGTTGCTGCTGGAGCACTTGCTGTGGCATTTGGCACTTCACATGTTGGACTTGTTCATAGAGCTCAGTTGAAATCTGGTCAGGTATTGCTAGTTTTGGGTGCAGCAGGAGGTGTGGGTCTTGCAGCTGTGCAAATTGGAAAAGCATGTGGGGCTATTGTCATTGCTGTTGCTAGGGGAGCTGAAAAGGTGCAGCTCTTGAAATCAATGGGTGTTGATCATGTGGTGGACTTGGGTAATGAAAATGTGACTGAGAGTGTGAAAGAGTTCCTTAAGGTCAAAAGGCTTAAAGGGATTGATGTCCTGTATGACCCAGTAGGAGGCAAGCTCATGAAAGAATCTTTGCGGCTTCTGAAATGGGGAGCGAACATTCTAATAATTGGGTTTGCAAGTGGAGAAATTCCTGTCATCCCTGCTAACATAGCTCTTGTTAAGAATTGGACAGTACATGGACTTTATTGGGGTAGTTACAAAATACATCGCCCAGCTGTTCTTGAAGATTCTCTCAAGGAGCTACTGTCTTGGTTGGCAAAAGGCTTGATTTCCGTTCACATTTCTCATTCTTACGGCCTGTCAGAGGCCAACCTCGCCTTCACTGCCATCAGAGATAGGAAAGCTATAGGGAAGGTGATGATTGTATTCGATGAGAAAATTACAAGATCTAAGCTGTGA
Protein sequence

>Msa0472990

MEALLCRKLGDPTVSVEDENSPIIISKNHPIPQLDSPTSVRVRIKATSLNFANYLQILGKYQEKPPLPFIPGSDFSGIVDSVGSNVTNFRVGDPVCSFAALGSYAQYVVVDQTQLFRVPEGCDLVAAGALAVAFGTSHVGLVHRAQLKSGQVLLVLGAAGGVGLAAVQIGKACGAIVIAVARGAEKVQLLKSMGVDHVVDLGNENVTESVKEFLKVKRLKGIDVLYDPVGGKLMKESLRLLKWGANILIIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPAVLEDSLKELLSWLAKGLISVHISHSYGLSEANLAFTAIRDRKAIGKVMIVFDEKITRSKL*