AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0517210


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0517210 MtrunA17_Chr3g0128511 99.422 346 2 0 1 346 1 346 0.0 694
Msa0517210 MtrunA17_Chr2g0281301 30.233 344 212 8 1 336 14 337 1.94e-34 129
Msa0517210 MtrunA17_Chr4g0045061 31.190 311 183 9 44 338 328 623 3.17e-33 129
Msa0517210 MtrunA17_Chr2g0281281 30.795 302 197 4 40 336 30 324 7.70e-32 122
Msa0517210 MtrunA17_Chr4g0045041 31.270 307 188 9 44 338 328 623 6.67e-31 123
Msa0517210 MtrunA17_Chr4g0013331 30.100 299 201 5 40 336 81 373 6.28e-29 115
Msa0517210 MtrunA17_Chr8g0365421 29.126 309 172 10 40 335 106 380 6.72e-24 101
Msa0517210 MtrunA17_Chr6g0466321 33.750 240 132 8 25 250 33 259 3.84e-23 98.2
Msa0517210 MtrunA17_Chr6g0465501 33.750 240 132 8 25 250 33 259 4.19e-23 98.2
Msa0517210 MtrunA17_Chr6g0453201 28.213 319 179 11 30 335 35 316 3.19e-18 84.3
Msa0517210 MtrunA17_Chr6g0453191 32.099 243 138 8 30 261 35 261 6.09e-18 83.2
Msa0517210 MtrunA17_Chr7g0228011 29.012 324 176 11 28 335 28 313 2.43e-16 78.6
Msa0517210 MtrunA17_Chr7g0214831 26.335 281 183 8 68 335 72 341 3.25e-16 78.6
Msa0517210 MtrunA17_Chr8g0385221 25.301 249 168 8 92 335 187 422 1.79e-14 73.9
Msa0517210 MtrunA17_Chr4g0015091 33.149 181 107 5 30 200 29 205 5.45e-14 72.0
Msa0517210 MtrunA17_Chr4g0014691 30.601 183 109 6 30 200 29 205 2.48e-12 67.0
Msa0517210 MtrunA17_Chr4g0014541 30.601 183 109 6 30 200 29 205 2.53e-12 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0517210 AT3G56460.1 77.101 345 78 1 1 344 1 345 0.0 523
Msa0517210 AT1G49670.1 31.546 317 184 10 44 343 328 628 1.61e-31 125
Msa0517210 AT1G49670.2 30.088 339 183 12 44 343 328 651 1.68e-29 119
Msa0517210 AT4G21580.1 29.866 298 203 4 40 335 30 323 1.14e-28 113
Msa0517210 AT5G61510.2 29.431 299 203 5 40 336 56 348 7.78e-26 106
Msa0517210 AT4G21580.3 29.195 298 199 5 40 335 30 317 1.46e-25 105
Msa0517210 AT5G61510.1 29.431 299 203 5 40 336 113 405 1.91e-25 106
Msa0517210 AT4G21580.2 28.328 293 206 2 44 335 1 290 6.42e-25 102
Msa0517210 AT1G23740.1 26.852 324 189 11 25 335 94 382 2.04e-23 100
Msa0517210 AT3G15090.1 27.405 343 195 13 25 337 48 366 1.66e-17 83.2
Msa0517210 AT4G13010.1 35.359 181 105 6 30 200 27 205 7.11e-14 72.0
Msa0517210 AT3G45770.1 25.926 270 191 5 17 280 51 317 1.70e-13 71.2
Msa0517210 AT5G63620.1 25.000 236 164 5 100 332 196 421 1.29e-12 68.9
Msa0517210 AT5G63620.2 25.000 236 164 5 100 332 196 421 2.83e-12 67.8
Msa0517210 AT3G45770.2 26.667 240 168 4 46 280 3 239 4.05e-12 66.6

Find 129 sgRNAs with CRISPR-Local

Find 550 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAGCGAACATTCTAATAAT+TGG 0.169619 3_4:-68686036 Msa0517210:CDS
CAGTTTGGCAATTATTTATT+TGG 0.185393 3_4:+68683195 None:intergenic
GCTAATTACTTGCAGATTCT+TGG 0.190783 3_4:-68687477 Msa0517210:CDS
TGATTCTTGGATATGATTAT+TGG 0.197695 3_4:+68687567 None:intergenic
CTTAAGGTCAAAAGGCTTAA+AGG 0.221379 3_4:-68686126 Msa0517210:CDS
GGACAGTACATGGACTTTAT+TGG 0.229971 3_4:-68684254 Msa0517210:CDS
CAATCTCTCCAGCATTATTA+AGG 0.241140 3_4:-68682983 Msa0517210:three_prime_UTR
GACAGTACATGGACTTTATT+GGG 0.241684 3_4:-68684253 Msa0517210:CDS
CCTCCTTTGCCATTCATTCC+TGG 0.241695 3_4:-68687438 Msa0517210:CDS
GTTTGTTCCTTTGCTGCTCT+TGG 0.265097 3_4:-68687348 Msa0517210:CDS
GGAGCACTTGCTGTGGCATT+TGG 0.265900 3_4:-68687009 Msa0517210:CDS
TTCATGAGCTTGCCTCCTAC+TGG 0.267191 3_4:+68686084 None:intergenic
ATGATCCTACATAAGAAAAT+TGG 0.271530 3_4:+68682864 None:intergenic
AGGATCACCAACACGGAAAT+TGG 0.272120 3_4:+68687371 None:intergenic
GAGAGGATCCGTGTGCTTAT+TGG 0.283165 3_4:+68683024 None:intergenic
TTTGTAGGTATTGCTAGTTT+TGG 0.301867 3_4:-68686842 Msa0517210:intron
GATTCTTGGATATGATTATT+GGG 0.311570 3_4:+68687568 None:intergenic
TGTTGATCATGTGGTGGACT+TGG 0.319846 3_4:-68686184 Msa0517210:CDS
TCTCATTTGTAATTGCAAAT+TGG 0.322778 3_4:-68682809 Msa0517210:three_prime_UTR
AATCTTTGCGGCTTCTGAAA+TGG 0.328075 3_4:-68686059 Msa0517210:CDS
AGAGGATCCGTGTGCTTATT+GGG 0.331083 3_4:+68683025 None:intergenic
GATTCACGCGAATTGCAATT+TGG 0.331473 3_4:-68683132 Msa0517210:three_prime_UTR
TTAAGGTCAAAAGGCTTAAA+GGG 0.333113 3_4:-68686125 Msa0517210:CDS
CTCCTACATCGGTTAGAGTT+AGG 0.333628 3_4:-68687524 Msa0517210:CDS
GAACAAAACGTGCGTTGAAA+TGG 0.339912 3_4:-68687649 Msa0517210:exon
ATCTTTGCGGCTTCTGAAAT+GGG 0.343716 3_4:-68686058 Msa0517210:CDS
TATGCTCGACTAATATCTTC+TGG 0.348556 3_4:-68683278 Msa0517210:three_prime_UTR
ATGCTATTTATCACTAATAA+TGG 0.355505 3_4:-68683161 Msa0517210:three_prime_UTR
GGTTGTGATTTGGTTGCTGC+TGG 0.359205 3_4:-68687030 Msa0517210:CDS
TTGAGGGATAGGGTGATTCT+TGG 0.360038 3_4:+68687554 None:intergenic
CGTCTTCAACGCTCACCGTT+GGG 0.366387 3_4:+68687598 None:intergenic
ATCAGAGATAGGAAAGCTAT+AGG 0.384250 3_4:-68683366 Msa0517210:CDS
GAGCGAACATTCTAATAATT+GGG 0.396914 3_4:-68686035 Msa0517210:CDS
GGTCTTGCAGCTGTGCAAAT+TGG 0.397069 3_4:-68686802 Msa0517210:CDS
GAATCACCCTATCCCTCAAT+TGG 0.401681 3_4:-68687550 Msa0517210:CDS
CCTTCACTGCCATCAGAGAT+AGG 0.409182 3_4:-68683377 Msa0517210:CDS
AATTTGTAGGTTTCGCGTGC+CGG 0.416854 3_4:-68687055 Msa0517210:intron
GGGGCGTTAGATTAATCTAA+TGG 0.417996 3_4:-68682962 Msa0517210:three_prime_UTR
CATAGAGCTCAGTTGAAATC+TGG 0.418835 3_4:-68686964 Msa0517210:CDS
CGTGCCGGAGGGTTGTGATT+TGG 0.423686 3_4:-68687040 Msa0517210:CDS
TTTGTATACTAGCATCTCCT+TGG 0.427995 3_4:+68683224 None:intergenic
GTTCACATTTCTCATTCTTA+CGG 0.428188 3_4:-68684147 Msa0517210:CDS
GCATCTATTCTACAACAGTT+TGG 0.433813 3_4:+68683180 None:intergenic
AGAGAATCTTCAAGAACAGC+TGG 0.435112 3_4:+68684210 None:intergenic
TCTGGGCACTCAAACATCAT+AGG 0.441996 3_4:-68683260 Msa0517210:three_prime_UTR
TCGTCTTCAACGCTCACCGT+TGG 0.443222 3_4:+68687597 None:intergenic
AATCTCTCCAGCATTATTAA+GGG 0.455571 3_4:-68682982 Msa0517210:three_prime_UTR
TCAATTGGATTCTCCTACAT+CGG 0.456528 3_4:-68687535 Msa0517210:CDS
GGAGAATCCAATTGAGGGAT+AGG 0.460120 3_4:+68687543 None:intergenic
TTGGGTGCAGCAGGAGGTGT+GGG 0.460493 3_4:-68686823 Msa0517210:CDS
AAGAGTTCCTTAAGGTCAAA+AGG 0.464102 3_4:-68686134 Msa0517210:CDS
TCAGGCATCGTTGATTCCGT+TGG 0.466758 3_4:-68687405 Msa0517210:CDS
CTAACGCCCCTTAATAATGC+TGG 0.468588 3_4:+68682975 None:intergenic
GGTGCAGCTCTTGAAATCAA+TGG 0.469140 3_4:-68686208 Msa0517210:CDS
AATAATGCTGGAGAGATTGA+TGG 0.469461 3_4:+68682987 None:intergenic
CTACTGTCTTGGTTGGCAAA+AGG 0.470601 3_4:-68684180 Msa0517210:CDS
TCAGAGATAGGAAAGCTATA+GGG 0.473276 3_4:-68683365 Msa0517210:CDS
TTAACAAGAGCTATGTTAGC+AGG 0.478741 3_4:+68685985 None:intergenic
TCATGAGCTTGCCTCCTACT+GGG 0.478839 3_4:+68686085 None:intergenic
GCTATGTTAGCAGGGATGAC+AGG 0.479328 3_4:+68685994 None:intergenic
GTGCAGCTCTTGAAATCAAT+GGG 0.486437 3_4:-68686207 Msa0517210:CDS
AGCTCAGTTGAAATCTGGTC+AGG 0.487489 3_4:-68686959 Msa0517210:intron
TGCCTCCTACTGGGTCATAC+AGG 0.492735 3_4:+68686094 None:intergenic
TGCTAACATAGCTCTTGTTA+AGG 0.494266 3_4:-68685983 Msa0517210:intron
GATGGCAGTGAAGGCGAGGT+TGG 0.495840 3_4:+68683386 None:intergenic
ATGCTCGACTAATATCTTCT+GGG 0.496198 3_4:-68683277 Msa0517210:three_prime_UTR
CTCTCAAGGAGCTACTGTCT+TGG 0.497731 3_4:-68684191 Msa0517210:CDS
AGGAGATGCTAGTATACAAA+AGG 0.502843 3_4:-68683221 Msa0517210:three_prime_UTR
GTTTCATTACATAACAGAAT+CGG 0.505113 3_4:-68687679 Msa0517210:five_prime_UTR
GCATTTGGCACTTCACATGT+TGG 0.508528 3_4:-68686994 Msa0517210:CDS
TTAATTCGTCCTAGTTACTC+AGG 0.508570 3_4:-68692380 Msa0517210:intron
TGCTGCTGGAGCACTTGCTG+TGG 0.510040 3_4:-68687016 Msa0517210:CDS
AAATCGGATCCAGGAATGAA+TGG 0.510104 3_4:+68687429 None:intergenic
GTTGATCATGTGGTGGACTT+GGG 0.511415 3_4:-68686183 Msa0517210:CDS
TGGCAGAATTGGACAGTACA+TGG 0.511468 3_4:-68684264 Msa0517210:intron
TTTGGGTGCAGCAGGAGGTG+TGG 0.512176 3_4:-68686824 Msa0517210:CDS
AGAGCAGCAAAGGAACAAAC+AGG 0.514377 3_4:+68687351 None:intergenic
CTATTGTCATTGCTGTTGCT+AGG 0.516037 3_4:-68686765 Msa0517210:intron
TGTAGGTTTCGCGTGCCGGA+GGG 0.517884 3_4:-68687051 Msa0517210:intron
TTGTAGGTTTCGCGTGCCGG+AGG 0.522078 3_4:-68687052 Msa0517210:intron
AACACGGAAATTGGTAACAT+TGG 0.526095 3_4:+68687380 None:intergenic
TGCTGCCAGAAAACCTAAGC+TGG 0.526575 3_4:+68692425 None:intergenic
TATAGCTTTCCTATCTCTGA+TGG 0.527406 3_4:+68683368 None:intergenic
AAACTTGAACCTGAGTAACT+AGG 0.531004 3_4:+68692371 None:intergenic
AATGTTACCAATTTCCGTGT+TGG 0.534038 3_4:-68687378 Msa0517210:CDS
TTAGATTAATCTAATGGCTG+AGG 0.535808 3_4:-68682956 Msa0517210:three_prime_UTR
ATCCTAACTCTAACCGATGT+AGG 0.537658 3_4:+68687522 None:intergenic
ATGTAGGAGAATCCAATTGA+GGG 0.540400 3_4:+68687538 None:intergenic
CTAATAATTGGGTTTGCAAG+TGG 0.543319 3_4:-68686024 Msa0517210:CDS
AGCTCATGAAAGAATCTTTG+CGG 0.548659 3_4:-68686071 Msa0517210:CDS
ATTAGCGAAATTCAAGCTTG+TGG 0.550287 3_4:+68687494 None:intergenic
ATAAGATCCAAGAGCAGCAA+AGG 0.551039 3_4:+68687341 None:intergenic
CCTATCTCTGATGGCAGTGA+AGG 0.555242 3_4:+68683377 None:intergenic
ATTGATGGAGAGAGCACGGA+AGG 0.556663 3_4:+68683002 None:intergenic
CTCTGATGGCAGTGAAGGCG+AGG 0.567574 3_4:+68683382 None:intergenic
CAAGGAGCTACTGTCTTGGT+TGG 0.572684 3_4:-68684187 Msa0517210:CDS
CCAGGAATGAATGGCAAAGG+AGG 0.572824 3_4:+68687438 None:intergenic
TGTTCTTGAAGATTCTCTCA+AGG 0.573910 3_4:-68684205 Msa0517210:CDS
ATTGGTAACATTGGAACCAA+CGG 0.576019 3_4:+68687389 None:intergenic
TGGAGAGAGCACGGAAGGAG+AGG 0.577292 3_4:+68683007 None:intergenic
GAGTGTGAAAGAGTTCCTTA+AGG 0.578196 3_4:-68686142 Msa0517210:CDS
AGAGAGATGTGCAGCACGCG+TGG 0.580307 3_4:+68683106 None:intergenic
GCAGATTCTTGGAAAGTACC+AGG 0.581141 3_4:-68687466 Msa0517210:CDS
ATGGCAAAGGAGGTTTCTCC+TGG 0.585688 3_4:+68687448 None:intergenic
TGCAAATTGGAAAAGCATGT+GGG 0.585981 3_4:-68686789 Msa0517210:CDS
TCATTCTTACGGCCTGTCAG+AGG 0.586401 3_4:-68684136 Msa0517210:intron
AGAGATTGATGGAGAGAGCA+CGG 0.601351 3_4:+68682998 None:intergenic
GAGAATCCAATTGAGGGATA+GGG 0.603597 3_4:+68687544 None:intergenic
TCTTTGCGGCTTCTGAAATG+GGG 0.609441 3_4:-68686057 Msa0517210:CDS
TAGATTAATCTAATGGCTGA+GGG 0.609597 3_4:-68682955 Msa0517210:three_prime_UTR
GATCCAGGAATGAATGGCAA+AGG 0.612870 3_4:+68687435 None:intergenic
TAACAAGAGCTATGTTAGCA+GGG 0.614061 3_4:+68685986 None:intergenic
ATCTCTCCAGCATTATTAAG+GGG 0.620436 3_4:-68682981 Msa0517210:three_prime_UTR
TAGGTTCATATTAGAGACCA+AGG 0.621322 3_4:-68683241 Msa0517210:three_prime_UTR
GCAACCAAATCACAACCCTC+CGG 0.621624 3_4:+68687036 None:intergenic
CAGAAAATTGGGTGACCCAA+CGG 0.628219 3_4:-68687613 Msa0517210:CDS
ATCAATGGGTGTTGATCATG+TGG 0.629567 3_4:-68686193 Msa0517210:CDS
AACAAACAGGATCACCAACA+CGG 0.633492 3_4:+68687364 None:intergenic
GATGTAGGAGAATCCAATTG+AGG 0.636037 3_4:+68687537 None:intergenic
AGATAGGAAAGCTATAGGGA+AGG 0.636916 3_4:-68683361 Msa0517210:CDS
GTCCTGTATGACCCAGTAGG+AGG 0.637191 3_4:-68686096 Msa0517210:CDS
GTGCAAATTGGAAAAGCATG+TGG 0.641885 3_4:-68686790 Msa0517210:CDS
GATGTCCTGTATGACCCAGT+AGG 0.653197 3_4:-68686099 Msa0517210:CDS
GAGAATCTTCAAGAACAGCT+GGG 0.655056 3_4:+68684211 None:intergenic
AATGGGTGTTGATCATGTGG+TGG 0.686665 3_4:-68686190 Msa0517210:CDS
ACAGTACATGGACTTTATTG+GGG 0.692527 3_4:-68684252 Msa0517210:CDS
GTAAGAATGAGAAATGTGAA+CGG 0.692858 3_4:+68684149 None:intergenic
AATAGTTCCCAATAAGCACA+CGG 0.696494 3_4:-68683032 Msa0517210:three_prime_UTR
GCAAATTGGAAAAGCATGTG+GGG 0.732786 3_4:-68686788 Msa0517210:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATTAAATATTTTAAATA+TGG - chr3_4:68685726-68685745 Msa0517210:intron 0.0%
!!! TTTTTGCTTATAATATTTAT+TGG + chr3_4:68682914-68682933 None:intergenic 10.0%
!!! TAATCATAATAACTTTTTTT+TGG - chr3_4:68683051-68683070 Msa0517210:three_prime_UTR 10.0%
!!! TTACATTAATTTTAGTTAAA+AGG - chr3_4:68686605-68686624 Msa0517210:intron 10.0%
!! CAAATTTAAACTAAAAAAAT+AGG + chr3_4:68691648-68691667 None:intergenic 10.0%
!!! GGTTATTTTTCAAAATATTT+TGG - chr3_4:68683072-68683091 Msa0517210:three_prime_UTR 15.0%
!!! AAAACACTAACTTTTTTTTT+TGG + chr3_4:68683170-68683189 None:intergenic 15.0%
!! TAATTAAAATATAAAAGGGT+TGG - chr3_4:68683410-68683429 Msa0517210:intron 15.0%
!! ATAATTATCTATAATAGTGA+AGG + chr3_4:68683966-68683985 None:intergenic 15.0%
!! GATAATAAGCAAATTATTAA+TGG + chr3_4:68684267-68684286 None:intergenic 15.0%
!! TTTGAAAAAAATAACTAACT+TGG - chr3_4:68684464-68684483 Msa0517210:intron 15.0%
!!! TATTAAAAGCTTACTTATTT+TGG - chr3_4:68685607-68685626 Msa0517210:intron 15.0%
!! ATAATGATATCATATTTGTT+AGG + chr3_4:68685672-68685691 None:intergenic 15.0%
!!! TTTTATCTTGAGTATAAATT+GGG + chr3_4:68685852-68685871 None:intergenic 15.0%
!!! TTTTTATCTTGAGTATAAAT+TGG + chr3_4:68685853-68685872 None:intergenic 15.0%
!! AAGAAATAGTTAATTTCAAT+AGG - chr3_4:68686126-68686145 Msa0517210:CDS 15.0%
!!! ATTAAAAGATTGTTTTTGTT+TGG + chr3_4:68686232-68686251 None:intergenic 15.0%
!!! ATGGTTGAATATTTAATTTA+AGG - chr3_4:68686385-68686404 Msa0517210:intron 15.0%
!!! TATATAAAAAAGTGTTTGTA+GGG + chr3_4:68686820-68686839 None:intergenic 15.0%
!!! ATATATAAAAAAGTGTTTGT+AGG + chr3_4:68686821-68686840 None:intergenic 15.0%
!! TATAAATTCTTTGAATTTGT+AGG - chr3_4:68688158-68688177 Msa0517210:intron 15.0%
!!! TAAAGTTATAGTTGTTTTAT+GGG - chr3_4:68688745-68688764 Msa0517210:intron 15.0%
!! AACAAAAAATGACATATAAA+TGG - chr3_4:68689776-68689795 Msa0517210:intron 15.0%
!! ACAAAAAATGACATATAAAT+GGG - chr3_4:68689777-68689796 Msa0517210:intron 15.0%
!! TATTTGGTATATAATGAAAA+AGG - chr3_4:68690247-68690266 Msa0517210:intron 15.0%
!! TTATGTATGTAGTTTAAATT+AGG + chr3_4:68690559-68690578 None:intergenic 15.0%
!! AAATACACAAATTATTAGAA+CGG + chr3_4:68691137-68691156 None:intergenic 15.0%
!!! TTTACTGAATCTTTTTTTTT+TGG - chr3_4:68691269-68691288 Msa0517210:intron 15.0%
!!! TTACTGAATCTTTTTTTTTT+GGG - chr3_4:68691270-68691289 Msa0517210:intron 15.0%
!!! AATTTTGGTGAAATATTTTA+TGG - chr3_4:68691595-68691614 Msa0517210:intron 15.0%
!!! AAATATTTTATGGATTATGT+TGG - chr3_4:68691605-68691624 Msa0517210:intron 15.0%
!!! AAGTTATTATAATTTTTTGG+TGG - chr3_4:68692159-68692178 Msa0517210:intron 15.0%
!!! AGTTATTATAATTTTTTGGT+GGG - chr3_4:68692160-68692179 Msa0517210:intron 15.0%
!!! TTCAAGTTTATTTTCTATTC+TGG - chr3_4:68682869-68682888 Msa0517210:three_prime_UTR 20.0%
!!! TCAAGTTTATTTTCTATTCT+GGG - chr3_4:68682870-68682889 Msa0517210:three_prime_UTR 20.0%
!! TGCTTATAATATTTATTGGA+TGG + chr3_4:68682910-68682929 None:intergenic 20.0%
!!! CTTTTGTTTATAATAGTGAT+TGG - chr3_4:68683003-68683022 Msa0517210:three_prime_UTR 20.0%
!! TCTATATCTATATAGTAGAA+AGG + chr3_4:68683223-68683242 None:intergenic 20.0%
!! ATATAGATATAGATAGATAC+TGG - chr3_4:68683230-68683249 Msa0517210:three_prime_UTR 20.0%
!!! GTTAGTTTCAACATATTATT+AGG + chr3_4:68683279-68683298 None:intergenic 20.0%
!! ATATGAATATATGAATGAAG+TGG - chr3_4:68683779-68683798 Msa0517210:intron 20.0%
!! ATAGATAATTATCCAACATT+CGG - chr3_4:68683974-68683993 Msa0517210:intron 20.0%
!!! GCATAGTTTGTATAAAATAA+TGG + chr3_4:68684439-68684458 None:intergenic 20.0%
!! AGGAGTAAAATAAACTAAAA+AGG + chr3_4:68684538-68684557 None:intergenic 20.0%
!!! TTTTTAATTGTTTCATTTGC+AGG + chr3_4:68685075-68685094 None:intergenic 20.0%
!! TGCAAATGAAACAATTAAAA+AGG - chr3_4:68685074-68685093 Msa0517210:intron 20.0%
!!! TTCTGTTGTTTAAAGTTAAA+AGG - chr3_4:68685146-68685165 Msa0517210:intron 20.0%
!!! CAAAACGAAAACTTTATTTT+TGG + chr3_4:68685334-68685353 None:intergenic 20.0%
!! GATAAAGACATAATATGATA+TGG - chr3_4:68685424-68685443 Msa0517210:intron 20.0%
!! AAAATAGTGTAATTATTACC+TGG + chr3_4:68685586-68685605 None:intergenic 20.0%
!!! AATGAATTTTTAATTATGCC+AGG - chr3_4:68685815-68685834 Msa0517210:intron 20.0%
!! ACTCAAGATAAAAATTACAA+AGG - chr3_4:68685859-68685878 Msa0517210:intron 20.0%
!! CATATCTTATCTTTATATCA+TGG - chr3_4:68685972-68685991 Msa0517210:intron 20.0%
!!! AGTTACCTTTAAAACTTTTA+GGG + chr3_4:68686010-68686029 None:intergenic 20.0%
!!! TGAAATTAACTATTTCTTGT+GGG + chr3_4:68686124-68686143 None:intergenic 20.0%
!!! TTGAAATTAACTATTTCTTG+TGG + chr3_4:68686125-68686144 None:intergenic 20.0%
!!! AATGTAAATTTACTCCTTTT+GGG + chr3_4:68686413-68686432 None:intergenic 20.0%
!! CATGTTAAAAAGTTCAAAAT+AGG + chr3_4:68687194-68687213 None:intergenic 20.0%
!!! ACTTATTTTTTCGATAACTA+CGG + chr3_4:68687477-68687496 None:intergenic 20.0%
!! AAACAGAACAATATATACAT+TGG + chr3_4:68688329-68688348 None:intergenic 20.0%
!!! GTAAAGTTATAGTTGTTTTA+TGG - chr3_4:68688744-68688763 Msa0517210:intron 20.0%
!! ACATTCTATGATAATCAATT+CGG - chr3_4:68689393-68689412 Msa0517210:intron 20.0%
!! ATAATCAATTCGGAATTAAT+TGG - chr3_4:68689403-68689422 Msa0517210:intron 20.0%
!! TAATCAATTCGGAATTAATT+GGG - chr3_4:68689404-68689423 Msa0517210:intron 20.0%
!! TCATTATATACCAAATATGT+AGG + chr3_4:68690244-68690263 None:intergenic 20.0%
!! TCCCATATAAATAAAAGAAA+AGG - chr3_4:68690492-68690511 Msa0517210:intron 20.0%
!!! GCCTTTTCTTTTATTTATAT+GGG + chr3_4:68690496-68690515 None:intergenic 20.0%
!!! AGCCTTTTCTTTTATTTATA+TGG + chr3_4:68690497-68690516 None:intergenic 20.0%
!! TTAATGTAAATATGCAATGT+GGG + chr3_4:68690701-68690720 None:intergenic 20.0%
!!! AGTGATTTTAACAAACAAAA+AGG + chr3_4:68690941-68690960 None:intergenic 20.0%
!! TAAAATTCAATGTACATTCA+AGG - chr3_4:68691169-68691188 Msa0517210:intron 20.0%
!!! CTCGTTAGTTTTTAAAATTT+TGG - chr3_4:68691580-68691599 Msa0517210:intron 20.0%
!! AATTTGATATACTGTATACT+TGG - chr3_4:68691662-68691681 Msa0517210:intron 20.0%
!! ATTTGATATACTGTATACTT+GGG - chr3_4:68691663-68691682 Msa0517210:intron 20.0%
!!! ATGCTATTTATCACTAATAA+TGG - chr3_4:68692065-68692084 Msa0517210:intron 20.0%
!! CAACAAAAAAAAAAGTGAAA+GGG + chr3_4:68692336-68692355 None:intergenic 20.0%
! TAAAAAAAACATACCAGCTT+AGG - chr3_4:68682788-68682807 Msa0517210:three_prime_UTR 25.0%
! TGTTTATAATAGTGATTGGA+TGG - chr3_4:68683007-68683026 Msa0517210:three_prime_UTR 25.0%
! TACCATGACAATTCTATATT+TGG - chr3_4:68683101-68683120 Msa0517210:three_prime_UTR 25.0%
! TACCAAATATAGAATTGTCA+TGG + chr3_4:68683106-68683125 None:intergenic 25.0%
! TGACAATTCTATATTTGGTA+TGG - chr3_4:68683106-68683125 Msa0517210:three_prime_UTR 25.0%
! AGATAGATACTGGATTTATA+TGG - chr3_4:68683240-68683259 Msa0517210:three_prime_UTR 25.0%
! ATCAATCAATAGACTCATAA+AGG - chr3_4:68683544-68683563 Msa0517210:intron 25.0%
! CGGTATTATTATGTAATTTC+TGG + chr3_4:68683585-68683604 None:intergenic 25.0%
! AATATCCCATATATATGCAT+GGG + chr3_4:68683712-68683731 None:intergenic 25.0%
! GAGACATATATACATAGTAA+TGG + chr3_4:68683880-68683899 None:intergenic 25.0%
!!! ATCATTTCTTAGTTTGCAAA+GGG + chr3_4:68684040-68684059 None:intergenic 25.0%
!! TTTCTTCTTTTGTCTAAACA+AGG - chr3_4:68684079-68684098 Msa0517210:intron 25.0%
! AGATATTGCATTTATATTGC+TGG - chr3_4:68684175-68684194 Msa0517210:CDS 25.0%
! ATAACTAACTTGGAAAAGAA+AGG - chr3_4:68684474-68684493 Msa0517210:intron 25.0%
! TAACTAACTTGGAAAAGAAA+GGG - chr3_4:68684475-68684494 Msa0517210:intron 25.0%
!!! TTTTTTTTTTGCAAATGCCT+CGG + chr3_4:68684575-68684594 None:intergenic 25.0%
!!! TAATGTCACTTTCATATAAG+TGG - chr3_4:68684678-68684697 Msa0517210:intron 25.0%
!!! AATGTCACTTTCATATAAGT+GGG - chr3_4:68684679-68684698 Msa0517210:intron 25.0%
! ATATGCATTATTATATGCAG+GGG + chr3_4:68684727-68684746 None:intergenic 25.0%
! GATATGCATTATTATATGCA+GGG + chr3_4:68684728-68684747 None:intergenic 25.0%
! AAAACTCGATTATTATGAGA+CGG - chr3_4:68684835-68684854 Msa0517210:intron 25.0%
!! GAATCTATGGTAAAGTATTA+AGG + chr3_4:68684945-68684964 None:intergenic 25.0%
!!! ACTCTTTTTTTAGAGAATCT+AGG + chr3_4:68685251-68685270 None:intergenic 25.0%
! GAAAATGATACATTTAATGC+AGG - chr3_4:68685353-68685372 Msa0517210:intron 25.0%
! CAAGACAAAATTTCTACTTA+TGG + chr3_4:68685539-68685558 None:intergenic 25.0%
!! CATAAGTAGAAATTTTGTCT+TGG - chr3_4:68685537-68685556 Msa0517210:intron 25.0%
! AATTGGGTTAAATATTATCC+TGG + chr3_4:68685836-68685855 None:intergenic 25.0%
!!! GAGTTACCTTTAAAACTTTT+AGG + chr3_4:68686011-68686030 None:intergenic 25.0%
! ATAACCACGATTATCTATAA+GGG + chr3_4:68686155-68686174 None:intergenic 25.0%
!! TGACTTTTATGCTTCTAAAT+TGG - chr3_4:68686186-68686205 Msa0517210:CDS 25.0%
!!! AAGATTGTTTTTGTTTGGTT+TGG + chr3_4:68686227-68686246 None:intergenic 25.0%
! TGTAGCAATCAAAAAACAAA+TGG - chr3_4:68686366-68686385 Msa0517210:intron 25.0%
!! TTTAATTTAAGGAACCCAAA+AGG - chr3_4:68686396-68686415 Msa0517210:intron 25.0%
!! CAATGTAAATTTACTCCTTT+TGG + chr3_4:68686414-68686433 None:intergenic 25.0%
! CAAAAGGAGTAAATTTACAT+TGG - chr3_4:68686412-68686431 Msa0517210:intron 25.0%
! GTTTAATAATGACGATCTTT+CGG + chr3_4:68686697-68686716 None:intergenic 25.0%
! AAAATAATGAGGACAATGTA+TGG + chr3_4:68686728-68686747 None:intergenic 25.0%
!! AAGATGTGTTTTCCTTTTTT+TGG + chr3_4:68686761-68686780 None:intergenic 25.0%
!! TTCTTTCTTGAGAATCATTT+TGG - chr3_4:68687127-68687146 Msa0517210:intron 25.0%
! AAAATAGGAAGAAAAAGATG+AGG + chr3_4:68687179-68687198 None:intergenic 25.0%
! GTTTCATTACATAACAGAAT+CGG - chr3_4:68687547-68687566 Msa0517210:CDS 25.0%
! GATTCTTGGATATGATTATT+GGG + chr3_4:68687661-68687680 None:intergenic 25.0%
! TGATTCTTGGATATGATTAT+TGG + chr3_4:68687662-68687681 None:intergenic 25.0%
! TAGATACATTCACGTAAAAA+TGG - chr3_4:68688066-68688085 Msa0517210:intron 25.0%
! AGATACATTCACGTAAAAAT+GGG - chr3_4:68688067-68688086 Msa0517210:intron 25.0%
!!! CGTAAAAATGGGTTAAATAA+TGG - chr3_4:68688078-68688097 Msa0517210:intron 25.0%
! GTATATATTGTTCTGTTTGT+TGG - chr3_4:68688331-68688350 Msa0517210:intron 25.0%
!! TTGTAGCTTCTTAATTTTCA+CGG - chr3_4:68688626-68688645 Msa0517210:intron 25.0%
!! GCTTAGCTAAAATGAATTTT+GGG - chr3_4:68688697-68688716 Msa0517210:intron 25.0%
!!! ACTTTTGTTTAAATACACAC+AGG - chr3_4:68688834-68688853 Msa0517210:intron 25.0%
!! TGTAACTGATGACATTATTT+TGG + chr3_4:68689564-68689583 None:intergenic 25.0%
! AATAAATGCGCAAATTGTAT+GGG + chr3_4:68689611-68689630 None:intergenic 25.0%
! AAATAAATGCGCAAATTGTA+TGG + chr3_4:68689612-68689631 None:intergenic 25.0%
! ATCAATGCTGAAAAATATAC+AGG - chr3_4:68689739-68689758 Msa0517210:intron 25.0%
! AAATAGATATGTACTAAGCA+TGG - chr3_4:68689853-68689872 Msa0517210:intron 25.0%
!!! AGTTTTTTCAAGGTTAGTTA+GGG + chr3_4:68689983-68690002 None:intergenic 25.0%
!!! TAGTTTTTTCAAGGTTAGTT+AGG + chr3_4:68689984-68690003 None:intergenic 25.0%
! AGATACATAGCATAAAGTAA+CGG + chr3_4:68690099-68690118 None:intergenic 25.0%
! GTAGATATATATCACAACTT+TGG + chr3_4:68690216-68690235 None:intergenic 25.0%
! CTTAATGTAAATATGCAATG+TGG + chr3_4:68690702-68690721 None:intergenic 25.0%
! TTTACATTAAGAGAAATGCT+AGG - chr3_4:68690711-68690730 Msa0517210:intron 25.0%
!! TTTGTTTGTTAAAATCACTC+TGG - chr3_4:68690942-68690961 Msa0517210:intron 25.0%
!! TAGTTCAATGTTCATTTTCT+TGG - chr3_4:68691363-68691382 Msa0517210:intron 25.0%
!! AGTTCAATGTTCATTTTCTT+GGG - chr3_4:68691364-68691383 Msa0517210:intron 25.0%
! TTAAAATTAGTGAGTGGTTA+GGG - chr3_4:68691403-68691422 Msa0517210:intron 25.0%
! TAAAAACTAACGAGAATAGA+AGG + chr3_4:68691574-68691593 None:intergenic 25.0%
! AAACAATTTCTTATTGTTGC+AGG - chr3_4:68691817-68691836 Msa0517210:intron 25.0%
! CAGTTTGGCAATTATTTATT+TGG + chr3_4:68692034-68692053 None:intergenic 25.0%
! CCAACAAAAAAAAAAGTGAA+AGG + chr3_4:68692337-68692356 None:intergenic 25.0%
!!! CCTTTCACTTTTTTTTTTGT+TGG - chr3_4:68692334-68692353 Msa0517210:intron 25.0%
!! CAATTCCAATTTTCTTATGT+AGG - chr3_4:68692357-68692376 Msa0517210:intron 25.0%
! ATGATCCTACATAAGAAAAT+TGG + chr3_4:68692365-68692384 None:intergenic 25.0%
! TCTCATTTGTAATTGCAAAT+TGG - chr3_4:68692417-68692436 Msa0517210:five_prime_UTR 25.0%
ATAGTAGAAAGGAAAATAGC+TGG + chr3_4:68683212-68683231 None:intergenic 30.0%
! GAGTCTATTGATTGATGAAA+AGG + chr3_4:68683540-68683559 None:intergenic 30.0%
!! AATTTCTGGCAATTAAACCA+TGG + chr3_4:68683571-68683590 None:intergenic 30.0%
CAATATCCCATATATATGCA+TGG + chr3_4:68683713-68683732 None:intergenic 30.0%
AAATTCATCATATATCCCTC+AGG - chr3_4:68683911-68683930 Msa0517210:intron 30.0%
ATACTTACAAAAGAACCTGA+GGG + chr3_4:68683929-68683948 None:intergenic 30.0%
!! CATCATTTCTTAGTTTGCAA+AGG + chr3_4:68684041-68684060 None:intergenic 30.0%
!! ATGTCACTTTCATATAAGTG+GGG - chr3_4:68684680-68684699 Msa0517210:intron 30.0%
GGATATGCATTATTATATGC+AGG + chr3_4:68684729-68684748 None:intergenic 30.0%
TAAGCATAACTCAATTGACA+GGG + chr3_4:68684750-68684769 None:intergenic 30.0%
ATAAGCATAACTCAATTGAC+AGG + chr3_4:68684751-68684770 None:intergenic 30.0%
TGTCAATTGAGTTATGCTTA+TGG - chr3_4:68684750-68684769 Msa0517210:intron 30.0%
GTCAATTGAGTTATGCTTAT+GGG - chr3_4:68684751-68684770 Msa0517210:intron 30.0%
GAGAAAGTAGATAGAATCTA+TGG + chr3_4:68684958-68684977 None:intergenic 30.0%
AAAATGAGCTCCTAGTTAAA+AGG - chr3_4:68685203-68685222 Msa0517210:intron 30.0%
TTAATCTAGGCTAAATGCAT+AGG + chr3_4:68685277-68685296 None:intergenic 30.0%
GCAATTGTTAGCATTAATCT+AGG + chr3_4:68685290-68685309 None:intergenic 30.0%
AGACATGATAGATATAGAGT+TGG - chr3_4:68685402-68685421 Msa0517210:intron 30.0%
ATGTGCACATGATAACAAAT+AGG - chr3_4:68685473-68685492 Msa0517210:intron 30.0%
TGTGCACATGATAACAAATA+GGG - chr3_4:68685474-68685493 Msa0517210:intron 30.0%
GTTTAATGCATCAAAGAGAT+AGG + chr3_4:68685921-68685940 None:intergenic 30.0%
!! ACGATCCCTAAAAGTTTTAA+AGG - chr3_4:68686002-68686021 Msa0517210:CDS 30.0%
TGATCAAGTGACTTCTTATA+AGG + chr3_4:68686086-68686105 None:intergenic 30.0%
GATAACCACGATTATCTATA+AGG + chr3_4:68686156-68686175 None:intergenic 30.0%
! TTTATAGGTTTGGTATCTCA+TGG + chr3_4:68686260-68686279 None:intergenic 30.0%
TGTGGTGTAATTTATAGGTT+TGG + chr3_4:68686270-68686289 None:intergenic 30.0%
TGTCATGTGGTGTAATTTAT+AGG + chr3_4:68686275-68686294 None:intergenic 30.0%
! AAACAACACATTTTGTCATG+TGG + chr3_4:68686288-68686307 None:intergenic 30.0%
TTAATTAACATATGCCCTTG+AGG - chr3_4:68686503-68686522 Msa0517210:intron 30.0%
TAATTAACATATGCCCTTGA+GGG - chr3_4:68686504-68686523 Msa0517210:intron 30.0%
GTTGCATCAGAAAAATAATG+AGG + chr3_4:68686739-68686758 None:intergenic 30.0%
TTTCTGATGCAACCAAAAAA+AGG - chr3_4:68686746-68686765 Msa0517210:intron 30.0%
TATGAATATGTTAGTCGAAG+AGG - chr3_4:68686894-68686913 Msa0517210:intron 30.0%
AGCAAGTAATAGAACACAAA+TGG + chr3_4:68687358-68687377 None:intergenic 30.0%
TATGTAATGAAACTGTGCAA+CGG + chr3_4:68687540-68687559 None:intergenic 30.0%
CAAACACACACTAAATAAAC+GGG + chr3_4:68687965-68687984 None:intergenic 30.0%
CCAAACACACACTAAATAAA+CGG + chr3_4:68687966-68687985 None:intergenic 30.0%
! TATATTGTTCTGTTTGTTGG+TGG - chr3_4:68688334-68688353 Msa0517210:intron 30.0%
! ATATTGTTCTGTTTGTTGGT+GGG - chr3_4:68688335-68688354 Msa0517210:intron 30.0%
!! TTTGTAGGTATTGCTAGTTT+TGG - chr3_4:68688384-68688403 Msa0517210:intron 30.0%
!!! TTGTAGGTATTGCTAGTTTT+GGG - chr3_4:68688385-68688404 Msa0517210:intron 30.0%
! TTTTCACGGTATAATCACAT+CGG - chr3_4:68688640-68688659 Msa0517210:intron 30.0%
! CGCTTAGCTAAAATGAATTT+TGG - chr3_4:68688696-68688715 Msa0517210:intron 30.0%
!! GTTATAGTTGTTTTATGGGT+AGG - chr3_4:68688749-68688768 Msa0517210:intron 30.0%
!! TCGCATTTTAATCTCTAACT+TGG - chr3_4:68688929-68688948 Msa0517210:intron 30.0%
! TGTTTCTTGTTTGCATAATC+TGG - chr3_4:68688977-68688996 Msa0517210:intron 30.0%
!!! TGTTTGCATAATCTGGTTTT+AGG - chr3_4:68688984-68689003 Msa0517210:intron 30.0%
!!! GTTTGCATAATCTGGTTTTA+GGG - chr3_4:68688985-68689004 Msa0517210:intron 30.0%
!!! TTTGCATAATCTGGTTTTAG+GGG - chr3_4:68688986-68689005 Msa0517210:intron 30.0%
TTAAGGTCAAAAGGCTTAAA+GGG - chr3_4:68689101-68689120 Msa0517210:intron 30.0%
GAGCGAACATTCTAATAATT+GGG - chr3_4:68689191-68689210 Msa0517210:intron 30.0%
TGTTATTATCTTGTCTTGCT+TGG - chr3_4:68689291-68689310 Msa0517210:intron 30.0%
AATTCGGAATTAATTGGGAA+GGG - chr3_4:68689409-68689428 Msa0517210:intron 30.0%
TGATGAGAAATTGTCATATG+TGG + chr3_4:68689446-68689465 None:intergenic 30.0%
!!! GATGACATTATTTTGGAAGT+GGG + chr3_4:68689557-68689576 None:intergenic 30.0%
!!! TGATGACATTATTTTGGAAG+TGG + chr3_4:68689558-68689577 None:intergenic 30.0%
GCAAATCAACAATGACTAAA+AGG + chr3_4:68689646-68689665 None:intergenic 30.0%
TTTCAGCTTCACTATCTTAA+AGG + chr3_4:68690058-68690077 None:intergenic 30.0%
TCTTAGTGATGAGATAGAAA+AGG + chr3_4:68690170-68690189 None:intergenic 30.0%
ACTAAGAAATAACTGACCTA+TGG - chr3_4:68690183-68690202 Msa0517210:intron 30.0%
CTAAGAAATAACTGACCTAT+GGG - chr3_4:68690184-68690203 Msa0517210:intron 30.0%
AAGAAACATACTGAATACCT+AGG - chr3_4:68690394-68690413 Msa0517210:intron 30.0%
!! GGATTTTACATTGCTTTTCA+GGG + chr3_4:68690475-68690494 None:intergenic 30.0%
AGGATTTAGTCATATGTATG+AGG + chr3_4:68690524-68690543 None:intergenic 30.0%
ATGACTAAATCCTTGAATCT+TGG - chr3_4:68690531-68690550 Msa0517210:intron 30.0%
AAATTAGGTTCCAAGATTCA+AGG + chr3_4:68690544-68690563 None:intergenic 30.0%
TTGTAGCGATTTAATCACAA+TGG + chr3_4:68690585-68690604 None:intergenic 30.0%
AAATCGCTACAATACTCTAA+TGG - chr3_4:68690593-68690612 Msa0517210:intron 30.0%
! AAGATCTCACTAGTTTAGTT+GGG + chr3_4:68690638-68690657 None:intergenic 30.0%
! AAAGATCTCACTAGTTTAGT+TGG + chr3_4:68690639-68690658 None:intergenic 30.0%
AACTAAACTAGTGAGATCTT+TGG - chr3_4:68690638-68690657 Msa0517210:intron 30.0%
TTATTGGATGAAATCCATGT+AGG + chr3_4:68690825-68690844 None:intergenic 30.0%
CTTAACACTCATTCTCTTAT+TGG + chr3_4:68690841-68690860 None:intergenic 30.0%
GTAAGAATGAGAAATGTGAA+CGG + chr3_4:68691080-68691099 None:intergenic 30.0%
GTTCACATTTCTCATTCTTA+CGG - chr3_4:68691079-68691098 Msa0517210:intron 30.0%
TATTAGAACGGATAAGACAA+GGG + chr3_4:68691125-68691144 None:intergenic 30.0%
TTATTAGAACGGATAAGACA+AGG + chr3_4:68691126-68691145 None:intergenic 30.0%
CTACTGTTGTAACTCTTTAA+AGG - chr3_4:68691220-68691239 Msa0517210:intron 30.0%
!! TTAGTGCTGACTTAACTAAT+AGG - chr3_4:68691326-68691345 Msa0517210:intron 30.0%
! GTTCAATGTTCATTTTCTTG+GGG - chr3_4:68691365-68691384 Msa0517210:intron 30.0%
GTTAAAATTAGTGAGTGGTT+AGG - chr3_4:68691402-68691421 Msa0517210:intron 30.0%
TCATATTTACTAATGCCCAT+TGG + chr3_4:68691537-68691556 None:intergenic 30.0%
! TGAGGACTAGTATTATACAA+TGG - chr3_4:68691791-68691810 Msa0517210:intron 30.0%
AATCTCTCCAGCATTATTAA+GGG - chr3_4:68692244-68692263 Msa0517210:intron 30.0%
TTAGATTAATCTAATGGCTG+AGG - chr3_4:68692270-68692289 Msa0517210:intron 30.0%
TAGATTAATCTAATGGCTGA+GGG - chr3_4:68692271-68692290 Msa0517210:intron 30.0%
AAAAAAAAGTGAAAGGGAAC+AGG + chr3_4:68692330-68692349 None:intergenic 30.0%
TTAATTCGTCCTAGTTACTC+AGG - chr3_4:68682846-68682865 Msa0517210:three_prime_UTR 35.0%
AAACTTGAACCTGAGTAACT+AGG + chr3_4:68682858-68682877 None:intergenic 35.0%
TCATCCTGTTAGTATAGTTC+AGG - chr3_4:68683313-68683332 Msa0517210:exon 35.0%
AAGACCTGAACTATACTAAC+AGG + chr3_4:68683320-68683339 None:intergenic 35.0%
!! TTCAGGTCTTCTCATTTTTC+TGG - chr3_4:68683330-68683349 Msa0517210:CDS 35.0%
AATAGACTCATAAAGGACCA+TGG - chr3_4:68683551-68683570 Msa0517210:intron 35.0%
!! GAAGTACTGTTGTGTTTGAT+CGG + chr3_4:68683605-68683624 None:intergenic 35.0%
ATTGTTCCAAGTGTGAGATT+GGG - chr3_4:68683656-68683675 Msa0517210:intron 35.0%
TTCAGCCCATGCATATATAT+GGG - chr3_4:68683704-68683723 Msa0517210:intron 35.0%
TGAATTAATGAGTACTCAGC+AGG + chr3_4:68683745-68683764 None:intergenic 35.0%
AGTCCAAGCACATATACATA+GGG + chr3_4:68683827-68683846 None:intergenic 35.0%
CATACTTACAAAAGAACCTG+AGG + chr3_4:68683930-68683949 None:intergenic 35.0%
ATCTCTTCTAACTTCATCAG+AGG + chr3_4:68684215-68684234 None:intergenic 35.0%
TAACTTGGAAAAGAAAGGGA+GGG - chr3_4:68684479-68684498 Msa0517210:intron 35.0%
GCATCATAAAAAAGTGAGAG+AGG - chr3_4:68685109-68685128 Msa0517210:intron 35.0%
CAGGTGTACTATCTTGATTA+GGG + chr3_4:68686328-68686347 None:intergenic 35.0%
TCAGGTGTACTATCTTGATT+AGG + chr3_4:68686329-68686348 None:intergenic 35.0%
! TGCATGAAAGCATGTACTTA+AGG + chr3_4:68686546-68686565 None:intergenic 35.0%
! ATCGTCTAAGATTACCTTGT+AGG + chr3_4:68686793-68686812 None:intergenic 35.0%
TTGCTCTAATTTCTCTCTCT+AGG - chr3_4:68687090-68687109 Msa0517210:intron 35.0%
TAGGAAGAAAAAGATGAGGA+TGG + chr3_4:68687175-68687194 None:intergenic 35.0%
TGCGAAACTTTACTAACACT+CGG + chr3_4:68687305-68687324 None:intergenic 35.0%
! AGCACTTTTGTGCAGAAAAT+TGG - chr3_4:68687601-68687620 Msa0517210:CDS 35.0%
! GCACTTTTGTGCAGAAAATT+GGG - chr3_4:68687602-68687621 Msa0517210:CDS 35.0%
ATGTAGGAGAATCCAATTGA+GGG + chr3_4:68687691-68687710 None:intergenic 35.0%
TCAATTGGATTCTCCTACAT+CGG - chr3_4:68687691-68687710 Msa0517210:intron 35.0%
ATTAGCGAAATTCAAGCTTG+TGG + chr3_4:68687735-68687754 None:intergenic 35.0%
GCTAATTACTTGCAGATTCT+TGG - chr3_4:68687749-68687768 Msa0517210:intron 35.0%
ATCAACGATGCCTGAAAAAT+CGG + chr3_4:68687816-68687835 None:intergenic 35.0%
! ATTGGTAACATTGGAACCAA+CGG + chr3_4:68687840-68687859 None:intergenic 35.0%
! AACACGGAAATTGGTAACAT+TGG + chr3_4:68687849-68687868 None:intergenic 35.0%
AATGTTACCAATTTCCGTGT+TGG - chr3_4:68687848-68687867 Msa0517210:intron 35.0%
CCGTTTATTTAGTGTGTGTT+TGG - chr3_4:68687963-68687982 Msa0517210:intron 35.0%
! TATTGTTCTGTTTGTTGGTG+GGG - chr3_4:68688336-68688355 Msa0517210:intron 35.0%
! TGCAAATTGGAAAAGCATGT+GGG - chr3_4:68688437-68688456 Msa0517210:intron 35.0%
AAGAGTTCCTTAAGGTCAAA+AGG - chr3_4:68689092-68689111 Msa0517210:intron 35.0%
! CTTTAAGCCTTTTGACCTTA+AGG + chr3_4:68689102-68689121 None:intergenic 35.0%
CTTAAGGTCAAAAGGCTTAA+AGG - chr3_4:68689100-68689119 Msa0517210:intron 35.0%
AGCTCATGAAAGAATCTTTG+CGG - chr3_4:68689155-68689174 Msa0517210:intron 35.0%
GGAGCGAACATTCTAATAAT+TGG - chr3_4:68689190-68689209 Msa0517210:intron 35.0%
CTAATAATTGGGTTTGCAAG+TGG - chr3_4:68689202-68689221 Msa0517210:intron 35.0%
TAACAAGAGCTATGTTAGCA+GGG + chr3_4:68689243-68689262 None:intergenic 35.0%
TTAACAAGAGCTATGTTAGC+AGG + chr3_4:68689244-68689263 None:intergenic 35.0%
TGCTAACATAGCTCTTGTTA+AGG - chr3_4:68689243-68689262 Msa0517210:intron 35.0%
! GGTACATCAGGAATAGATTT+TGG - chr3_4:68689264-68689283 Msa0517210:intron 35.0%
AGATCAAGCAACAAACAATC+AGG + chr3_4:68689335-68689354 None:intergenic 35.0%
CAATTCGGAATTAATTGGGA+AGG - chr3_4:68689408-68689427 Msa0517210:intron 35.0%
ATTCGGAATTAATTGGGAAG+GGG - chr3_4:68689410-68689429 Msa0517210:intron 35.0%
CAAAAGCAACAGTCATGATA+TGG + chr3_4:68689511-68689530 None:intergenic 35.0%
!!! CATTGATTTTCACTTGACAG+TGG + chr3_4:68689726-68689745 None:intergenic 35.0%
AAATCTAGCAAACTGTGAAG+CGG + chr3_4:68689954-68689973 None:intergenic 35.0%
!!! CTTCACAGTTTGCTAGATTT+TGG - chr3_4:68689954-68689973 Msa0517210:intron 35.0%
CATGTTGCAATAATACATGC+AGG + chr3_4:68690011-68690030 None:intergenic 35.0%
AGTAACGGTAGTATTTAAGC+AGG + chr3_4:68690084-68690103 None:intergenic 35.0%
! CATCATACTGGCATTTTGTT+TGG + chr3_4:68690143-68690162 None:intergenic 35.0%
AGAAAAGGACTACATCATAC+TGG + chr3_4:68690155-68690174 None:intergenic 35.0%
TCTACACACACCTACATATT+TGG - chr3_4:68690231-68690250 Msa0517210:intron 35.0%
!!! CTGGGGAATTTTTAGTTATC+TGG - chr3_4:68690289-68690308 Msa0517210:intron 35.0%
!!! GGAATTTTTAGTTATCTGGC+TGG - chr3_4:68690293-68690312 Msa0517210:intron 35.0%
AGTATGTTTCTTAGATGTCG+TGG + chr3_4:68690386-68690405 None:intergenic 35.0%
AAACATACTGAATACCTAGG+TGG - chr3_4:68690397-68690416 Msa0517210:intron 35.0%
AACATACTGAATACCTAGGT+GGG - chr3_4:68690398-68690417 Msa0517210:intron 35.0%
!! GGGATTTTACATTGCTTTTC+AGG + chr3_4:68690476-68690495 None:intergenic 35.0%
! TTGGATCTGCAAACTTTTGT+TGG - chr3_4:68690657-68690676 Msa0517210:intron 35.0%
TAAATATGCAATGTGGGCAA+GGG + chr3_4:68690695-68690714 None:intergenic 35.0%
TTATTGAGTGAATCCCATGT+GGG - chr3_4:68690759-68690778 Msa0517210:intron 35.0%
AAAATGGATCCCACATAAAG+TGG + chr3_4:68690790-68690809 None:intergenic 35.0%
TAGGTCTCACACTTAGAAAA+TGG + chr3_4:68690806-68690825 None:intergenic 35.0%
GAACTAACATAAGAGAGCTT+TGG + chr3_4:68690885-68690904 None:intergenic 35.0%
!! TATGTTAGTTCTGCTATAGC+TGG - chr3_4:68690894-68690913 Msa0517210:intron 35.0%
TAAAATCACTCTGGCAGAAT+TGG - chr3_4:68690951-68690970 Msa0517210:intron 35.0%
GACAGTACATGGACTTTATT+GGG - chr3_4:68690973-68690992 Msa0517210:intron 35.0%
ACAGTACATGGACTTTATTG+GGG - chr3_4:68690974-68690993 Msa0517210:intron 35.0%
TGTTCTTGAAGATTCTCTCA+AGG - chr3_4:68691021-68691040 Msa0517210:intron 35.0%
GGATAAATCAGCATGTTTAC+TGG - chr3_4:68691291-68691310 Msa0517210:intron 35.0%
ACCAGGTTAAAATTAGTGAG+TGG - chr3_4:68691397-68691416 Msa0517210:intron 35.0%
!! ACCACTCACTAATTTTAACC+TGG + chr3_4:68691401-68691420 None:intergenic 35.0%
TTGTGACATCAATGACCAAT+GGG - chr3_4:68691519-68691538 Msa0517210:intron 35.0%
ACTTGGGTCATTATAACAGT+TGG - chr3_4:68691679-68691698 Msa0517210:intron 35.0%
AGGCAAATGATACAAACTAC+TGG + chr3_4:68691750-68691769 None:intergenic 35.0%
TGAACATCAATGGAGCATAT+AGG + chr3_4:68691770-68691789 None:intergenic 35.0%
TAGTCCTCATTGAACATCAA+TGG + chr3_4:68691780-68691799 None:intergenic 35.0%
TATAGCTTTCCTATCTCTGA+TGG + chr3_4:68691861-68691880 None:intergenic 35.0%
ATCAGAGATAGGAAAGCTAT+AGG - chr3_4:68691860-68691879 Msa0517210:intron 35.0%
TCAGAGATAGGAAAGCTATA+GGG - chr3_4:68691861-68691880 Msa0517210:intron 35.0%
TATGCTCGACTAATATCTTC+TGG - chr3_4:68691948-68691967 Msa0517210:intron 35.0%
ATGCTCGACTAATATCTTCT+GGG - chr3_4:68691949-68691968 Msa0517210:intron 35.0%
TAGGTTCATATTAGAGACCA+AGG - chr3_4:68691985-68692004 Msa0517210:intron 35.0%
TTTGTATACTAGCATCTCCT+TGG + chr3_4:68692005-68692024 None:intergenic 35.0%
AGGAGATGCTAGTATACAAA+AGG - chr3_4:68692005-68692024 Msa0517210:intron 35.0%
GCATCTATTCTACAACAGTT+TGG + chr3_4:68692049-68692068 None:intergenic 35.0%
AATAGTTCCCAATAAGCACA+CGG - chr3_4:68692194-68692213 Msa0517210:intron 35.0%
AATAATGCTGGAGAGATTGA+TGG + chr3_4:68692242-68692261 None:intergenic 35.0%
CAATCTCTCCAGCATTATTA+AGG - chr3_4:68692243-68692262 Msa0517210:intron 35.0%
ATCTCTCCAGCATTATTAAG+GGG - chr3_4:68692245-68692264 Msa0517210:intron 35.0%
! ACATACCAGCTTAGGTTTTC+TGG - chr3_4:68682796-68682815 Msa0517210:three_prime_UTR 40.0%
! CAAGTTCCATATTTTGCGTG+CGG - chr3_4:68683501-68683520 Msa0517210:intron 40.0%
! AAGTTCCATATTTTGCGTGC+GGG - chr3_4:68683502-68683521 Msa0517210:intron 40.0%
TGCATCACATTATTGACGAG+GGG + chr3_4:68683627-68683646 None:intergenic 40.0%
CTGCATCACATTATTGACGA+GGG + chr3_4:68683628-68683647 None:intergenic 40.0%
GATTGTTCCAAGTGTGAGAT+TGG - chr3_4:68683655-68683674 Msa0517210:intron 40.0%
! CATATATATGCATGGGCTGA+AGG + chr3_4:68683705-68683724 None:intergenic 40.0%
CTTCAGCCCATGCATATATA+TGG - chr3_4:68683703-68683722 Msa0517210:intron 40.0%
GATCCCTATGTATATGTGCT+TGG - chr3_4:68683821-68683840 Msa0517210:intron 40.0%
CAGTCCAAGCACATATACAT+AGG + chr3_4:68683828-68683847 None:intergenic 40.0%
TGTATATGTGCTTGGACTGA+AGG - chr3_4:68683829-68683848 Msa0517210:intron 40.0%
GTATATGTGCTTGGACTGAA+GGG - chr3_4:68683830-68683849 Msa0517210:intron 40.0%
TATATGTGCTTGGACTGAAG+GGG - chr3_4:68683831-68683850 Msa0517210:intron 40.0%
!! GAAAGTATTGTCGTCCATTG+TGG + chr3_4:68684140-68684159 None:intergenic 40.0%
CTAACTTGGAAAAGAAAGGG+AGG - chr3_4:68684478-68684497 Msa0517210:intron 40.0%
!! GCAAATGCCTCGGTTATTTT+AGG + chr3_4:68684565-68684584 None:intergenic 40.0%
! TTTCATATAAGTGGGGTGTC+TGG - chr3_4:68684687-68684706 Msa0517210:intron 40.0%
! TTCATATAAGTGGGGTGTCT+GGG - chr3_4:68684688-68684707 Msa0517210:intron 40.0%
ATTATTATATGCAGGGGCTG+GGG + chr3_4:68684721-68684740 None:intergenic 40.0%
CATTATTATATGCAGGGGCT+GGG + chr3_4:68684722-68684741 None:intergenic 40.0%
!! CGTTGATGCTCCTTTTAACT+AGG + chr3_4:68685216-68685235 None:intergenic 40.0%
! TTTTGCTAGCCAGTATCCTA+AGG - chr3_4:68685497-68685516 Msa0517210:intron 40.0%
TTTGCTAGCCAGTATCCTAA+GGG - chr3_4:68685498-68685517 Msa0517210:intron 40.0%
ATTCATTAACCACTGCCCTT+AGG + chr3_4:68685516-68685535 None:intergenic 40.0%
GTAAGCTGTTACAATTGACC+AGG - chr3_4:68685565-68685584 Msa0517210:intron 40.0%
TTGCTTAACCAATGCCCTTA+GGG - chr3_4:68685630-68685649 Msa0517210:intron 40.0%
AATGTTAACCAGTGCCCTAA+GGG + chr3_4:68685647-68685666 None:intergenic 40.0%
GTGACCCTTATAGATAATCG+TGG - chr3_4:68686148-68686167 Msa0517210:CDS 40.0%
ATTGCTCGTAAATCATGGTC+AGG + chr3_4:68686347-68686366 None:intergenic 40.0%
GCTACATTGCTCGTAAATCA+TGG + chr3_4:68686352-68686371 None:intergenic 40.0%
!! ATGTTAACTTGTGCCCTCAA+GGG + chr3_4:68686520-68686539 None:intergenic 40.0%
!! AATGTTAACTTGTGCCCTCA+AGG + chr3_4:68686521-68686540 None:intergenic 40.0%
GTACATGCTTTCATGCATAG+AGG - chr3_4:68686549-68686568 Msa0517210:intron 40.0%
AGTTTGCATGCACTTCTTTG+CGG - chr3_4:68686581-68686600 Msa0517210:intron 40.0%
ATCTTCCTCGTTATCCTACA+AGG - chr3_4:68686776-68686795 Msa0517210:CDS 40.0%
GATTACCTTGTAGGATAACG+AGG + chr3_4:68686784-68686803 None:intergenic 40.0%
AGATGAGTACTTCCTTACCT+TGG - chr3_4:68687508-68687527 Msa0517210:CDS 40.0%
GAACAAAACGTGCGTTGAAA+TGG - chr3_4:68687577-68687596 Msa0517210:CDS 40.0%
GAGAATCCAATTGAGGGATA+GGG + chr3_4:68687685-68687704 None:intergenic 40.0%
GATGTAGGAGAATCCAATTG+AGG + chr3_4:68687692-68687711 None:intergenic 40.0%
ATCCTAACTCTAACCGATGT+AGG + chr3_4:68687707-68687726 None:intergenic 40.0%
AAATCGGATCCAGGAATGAA+TGG + chr3_4:68687800-68687819 None:intergenic 40.0%
! ATTCCTGGATCCGATTTTTC+AGG - chr3_4:68687803-68687822 Msa0517210:intron 40.0%
AACAAACAGGATCACCAACA+CGG + chr3_4:68687865-68687884 None:intergenic 40.0%
ATAAGATCCAAGAGCAGCAA+AGG + chr3_4:68687888-68687907 None:intergenic 40.0%
! ATAAACGGGAAGAGGAGTAT+CGG + chr3_4:68687951-68687970 None:intergenic 40.0%
CACACTAAATAAACGGGAAG+AGG + chr3_4:68687959-68687978 None:intergenic 40.0%
CATAGAGCTCAGTTGAAATC+TGG - chr3_4:68688262-68688281 Msa0517210:intron 40.0%
TTGGTGGGGTTAAGTTATGT+GGG - chr3_4:68688350-68688369 Msa0517210:intron 40.0%
TGGGTTGTGGAATTGTTTGT+AGG - chr3_4:68688369-68688388 Msa0517210:intron 40.0%
! GTGCAAATTGGAAAAGCATG+TGG - chr3_4:68688436-68688455 Msa0517210:intron 40.0%
! GCAAATTGGAAAAGCATGTG+GGG - chr3_4:68688438-68688457 Msa0517210:intron 40.0%
! CTATTGTCATTGCTGTTGCT+AGG - chr3_4:68688461-68688480 Msa0517210:intron 40.0%
ATGCCATTATGCCTTTGAGT+TGG - chr3_4:68688513-68688532 Msa0517210:intron 40.0%
! TGCCATTATGCCTTTGAGTT+GGG - chr3_4:68688514-68688533 Msa0517210:intron 40.0%
! AACCCAACTCAAAGGCATAA+TGG + chr3_4:68688519-68688538 None:intergenic 40.0%
CCAAAATGAACCCAACTCAA+AGG + chr3_4:68688527-68688546 None:intergenic 40.0%
!!! CCTTTGAGTTGGGTTCATTT+TGG - chr3_4:68688524-68688543 Msa0517210:intron 40.0%
ACATAGGCTAAGAAGCTCAT+GGG + chr3_4:68688564-68688583 None:intergenic 40.0%
AACATAGGCTAAGAAGCTCA+TGG + chr3_4:68688565-68688584 None:intergenic 40.0%
ATCTCTAACTTGGTATCCCT+TGG - chr3_4:68688939-68688958 Msa0517210:intron 40.0%
ACTCAACTCCAACTTTCCAA+GGG + chr3_4:68688958-68688977 None:intergenic 40.0%
GTGCAGCTCTTGAAATCAAT+GGG - chr3_4:68689019-68689038 Msa0517210:intron 40.0%
!! ATCAATGGGTGTTGATCATG+TGG - chr3_4:68689033-68689052 Msa0517210:intron 40.0%
GAGTGTGAAAGAGTTCCTTA+AGG - chr3_4:68689084-68689103 Msa0517210:intron 40.0%
! AATCTTTGCGGCTTCTGAAA+TGG - chr3_4:68689167-68689186 Msa0517210:intron 40.0%
!! ATCTTTGCGGCTTCTGAAAT+GGG - chr3_4:68689168-68689187 Msa0517210:intron 40.0%
AGCTCTTGTTAAGGTACATC+AGG - chr3_4:68689252-68689271 Msa0517210:intron 40.0%
!! TTAATTGGGAAGGGGTATCA+AGG - chr3_4:68689418-68689437 Msa0517210:intron 40.0%
!! TAATTGGGAAGGGGTATCAA+GGG - chr3_4:68689419-68689438 Msa0517210:intron 40.0%
!!! TGACTGTTGCTTTTGCTGTT+CGG - chr3_4:68689516-68689535 Msa0517210:intron 40.0%
!! TCATTGTTGATTTGCTGACG+AGG - chr3_4:68689651-68689670 Msa0517210:intron 40.0%
!! CATTGTTGATTTGCTGACGA+GGG - chr3_4:68689652-68689671 Msa0517210:intron 40.0%
! ATGGGAAGAGAATTTTGAGC+AGG - chr3_4:68689795-68689814 Msa0517210:intron 40.0%
!!! GCAGGCTGTTAGTTTTTTCA+AGG + chr3_4:68689993-68690012 None:intergenic 40.0%
!!! CTGGCATTTTGTTTGGCTTT+TGG + chr3_4:68690136-68690155 None:intergenic 40.0%
!! CAACTTTGGAATAGACCCAT+AGG + chr3_4:68690202-68690221 None:intergenic 40.0%
GTAAATATGCAATGTGGGCA+AGG + chr3_4:68690696-68690715 None:intergenic 40.0%
CTTATTGAGTGAATCCCATG+TGG - chr3_4:68690758-68690777 Msa0517210:intron 40.0%
TTCTAAGTGTGAGACCTACA+TGG - chr3_4:68690808-68690827 Msa0517210:intron 40.0%
GGACAGTACATGGACTTTAT+TGG - chr3_4:68690972-68690991 Msa0517210:intron 40.0%
GAGAATCTTCAAGAACAGCT+GGG + chr3_4:68691018-68691037 None:intergenic 40.0%
AGAGAATCTTCAAGAACAGC+TGG + chr3_4:68691019-68691038 None:intergenic 40.0%
AAATTAGTGAGTGGTTAGGG+TGG - chr3_4:68691406-68691425 Msa0517210:intron 40.0%
AATTAGTGAGTGGTTAGGGT+GGG - chr3_4:68691407-68691426 Msa0517210:intron 40.0%
CTTGTGACATCAATGACCAA+TGG - chr3_4:68691518-68691537 Msa0517210:intron 40.0%
TGCTCCATTGATGTTCAATG+AGG - chr3_4:68691773-68691792 Msa0517210:intron 40.0%
AGATAGGAAAGCTATAGGGA+AGG - chr3_4:68691865-68691884 Msa0517210:intron 40.0%
GATTCACGCGAATTGCAATT+TGG - chr3_4:68692094-68692113 Msa0517210:intron 40.0%
! GGGGCGTTAGATTAATCTAA+TGG - chr3_4:68692264-68692283 Msa0517210:intron 40.0%
CGCACGCAAAATATGGAACT+TGG + chr3_4:68683503-68683522 None:intergenic 45.0%
GCTGCATCACATTATTGACG+AGG + chr3_4:68683629-68683648 None:intergenic 45.0%
TTCTCTCCCAATCTCACACT+TGG + chr3_4:68683665-68683684 None:intergenic 45.0%
TTGGGAGAGAAAGAGAGTGA+AGG - chr3_4:68683674-68683693 Msa0517210:intron 45.0%
TGGGAGAGAAAGAGAGTGAA+GGG - chr3_4:68683675-68683694 Msa0517210:intron 45.0%
ATGGAGACAGCAGAGAAAGA+AGG + chr3_4:68683861-68683880 None:intergenic 45.0%
CAGATGCTATAGCCGAATGT+TGG + chr3_4:68683989-68684008 None:intergenic 45.0%
TCACGCACTACTTCCTTATC+AGG - chr3_4:68684108-68684127 Msa0517210:intron 45.0%
CACGCACTACTTCCTTATCA+GGG - chr3_4:68684109-68684128 Msa0517210:intron 45.0%
CACTACTTCCTTATCAGGGT+GGG - chr3_4:68684113-68684132 Msa0517210:intron 45.0%
TTGGAAAAGAAAGGGAGGGT+TGG - chr3_4:68684483-68684502 Msa0517210:intron 45.0%
! GGGAGGGTTGGATGATTTTA+TGG - chr3_4:68684495-68684514 Msa0517210:intron 45.0%
!!! CCTCGGTTATTTTAGGACGA+AGG + chr3_4:68684558-68684577 None:intergenic 45.0%
CCTTCGTCCTAAAATAACCG+AGG - chr3_4:68684555-68684574 Msa0517210:intron 45.0%
! TCATATAAGTGGGGTGTCTG+GGG - chr3_4:68684689-68684708 Msa0517210:intron 45.0%
GCATTATTATATGCAGGGGC+TGG + chr3_4:68684723-68684742 None:intergenic 45.0%
GTTGCTTAACCAATGCCCTT+AGG - chr3_4:68685629-68685648 Msa0517210:intron 45.0%
GAATGTTAACCAGTGCCCTA+AGG + chr3_4:68685648-68685667 None:intergenic 45.0%
GAAGATCGTCGAAATCACGA+AGG + chr3_4:68687283-68687302 None:intergenic 45.0%
CAACGGAAAAAGCCAAGGTA+AGG + chr3_4:68687523-68687542 None:intergenic 45.0%
CAGAAAATTGGGTGACCCAA+CGG - chr3_4:68687613-68687632 Msa0517210:CDS 45.0%
TTGAGGGATAGGGTGATTCT+TGG + chr3_4:68687675-68687694 None:intergenic 45.0%
GAATCACCCTATCCCTCAAT+TGG - chr3_4:68687676-68687695 Msa0517210:five_prime_UTR 45.0%
GGAGAATCCAATTGAGGGAT+AGG + chr3_4:68687686-68687705 None:intergenic 45.0%
! CTCCTACATCGGTTAGAGTT+AGG - chr3_4:68687702-68687721 Msa0517210:intron 45.0%
!! GCAGATTCTTGGAAAGTACC+AGG - chr3_4:68687760-68687779 Msa0517210:intron 45.0%
GATCCAGGAATGAATGGCAA+AGG + chr3_4:68687794-68687813 None:intergenic 45.0%
ATGCCTGAAAAATCGGATCC+AGG + chr3_4:68687809-68687828 None:intergenic 45.0%
AGGATCACCAACACGGAAAT+TGG + chr3_4:68687858-68687877 None:intergenic 45.0%
AGAGCAGCAAAGGAACAAAC+AGG + chr3_4:68687878-68687897 None:intergenic 45.0%
GTTTGTTCCTTTGCTGCTCT+TGG - chr3_4:68687878-68687897 Msa0517210:intron 45.0%
AATTTGTAGGTTTCGCGTGC+CGG - chr3_4:68688171-68688190 Msa0517210:intron 45.0%
GCATTTGGCACTTCACATGT+TGG - chr3_4:68688232-68688251 Msa0517210:intron 45.0%
AGCTCAGTTGAAATCTGGTC+AGG - chr3_4:68688267-68688286 Msa0517210:intron 45.0%
! GTTGGTGGGGTTAAGTTATG+TGG - chr3_4:68688349-68688368 Msa0517210:intron 45.0%
! GGGTTAAGTTATGTGGGTTG+TGG - chr3_4:68688356-68688375 Msa0517210:intron 45.0%
GGCAACGTGAATGCAAACAT+AGG + chr3_4:68688580-68688599 None:intergenic 45.0%
AGCAGTTGCTAAATGTGCTG+CGG + chr3_4:68688601-68688620 None:intergenic 45.0%
CTTGGTATCCCTTGGAAAGT+TGG - chr3_4:68688947-68688966 Msa0517210:intron 45.0%
CACTCAACTCCAACTTTCCA+AGG + chr3_4:68688959-68688978 None:intergenic 45.0%
!!! TGGTTTTAGGGGAGCTGAAA+AGG - chr3_4:68688997-68689016 Msa0517210:intron 45.0%
GGTGCAGCTCTTGAAATCAA+TGG - chr3_4:68689018-68689037 Msa0517210:intron 45.0%
!! AATGGGTGTTGATCATGTGG+TGG - chr3_4:68689036-68689055 Msa0517210:intron 45.0%
!! TGTTGATCATGTGGTGGACT+TGG - chr3_4:68689042-68689061 Msa0517210:intron 45.0%
!! GTTGATCATGTGGTGGACTT+GGG - chr3_4:68689043-68689062 Msa0517210:intron 45.0%
!! TCTTTGCGGCTTCTGAAATG+GGG - chr3_4:68689169-68689188 Msa0517210:intron 45.0%
AGTTACATGCACCCGTAGTA+GGG - chr3_4:68689577-68689596 Msa0517210:intron 45.0%
ATGAAACTGAGAGCTGAGAC+TGG - chr3_4:68690270-68690289 Msa0517210:intron 45.0%
TGAAACTGAGAGCTGAGACT+GGG - chr3_4:68690271-68690290 Msa0517210:intron 45.0%
ACTGAATACCTAGGTGGGTA+AGG - chr3_4:68690403-68690422 Msa0517210:intron 45.0%
TAAAGTGGTGAGACCCACAT+GGG + chr3_4:68690775-68690794 None:intergenic 45.0%
ATAAAGTGGTGAGACCCACA+TGG + chr3_4:68690776-68690795 None:intergenic 45.0%
TGGGTCTCACCACTTTATGT+GGG - chr3_4:68690778-68690797 Msa0517210:intron 45.0%
TGGCAGAATTGGACAGTACA+TGG - chr3_4:68690962-68690981 Msa0517210:intron 45.0%
CTACTGTCTTGGTTGGCAAA+AGG - chr3_4:68691046-68691065 Msa0517210:intron 45.0%
!! CATGTTTACTGGCCTTGTTC+AGG - chr3_4:68691302-68691321 Msa0517210:intron 45.0%
GTCAGCACTAAACCTGAACA+AGG + chr3_4:68691317-68691336 None:intergenic 45.0%
TCTTGGGGTTCTATTTGACC+AGG - chr3_4:68691380-68691399 Msa0517210:intron 45.0%
TCTGGGCACTCAAACATCAT+AGG - chr3_4:68691966-68691985 Msa0517210:intron 45.0%
AGAGGATCCGTGTGCTTATT+GGG + chr3_4:68692204-68692223 None:intergenic 45.0%
AGAGATTGATGGAGAGAGCA+CGG + chr3_4:68692231-68692250 None:intergenic 45.0%
CTAACGCCCCTTAATAATGC+TGG + chr3_4:68692254-68692273 None:intergenic 45.0%
!! AAAATTTATTTGAAAAATAT+TGG - chr3_4:68683359-68683378 Msa0517210:CDS 5.0%
!! TACATTAATTAAAATATAAA+AGG - chr3_4:68683405-68683424 Msa0517210:intron 5.0%
!! ACATTAATTAAAATATAAAA+GGG - chr3_4:68683406-68683425 Msa0517210:intron 5.0%
!! TAATTAATTATAAATAAGTA+AGG - chr3_4:68685753-68685772 Msa0517210:intron 5.0%
!!! ATATTTTTTAACTTTATTTT+TGG + chr3_4:68686872-68686891 None:intergenic 5.0%
!!! ATAGTTTTTATTTTAATTTT+TGG + chr3_4:68687060-68687079 None:intergenic 5.0%
!! AAATTTAAACTAAAAAAATA+GGG + chr3_4:68691647-68691666 None:intergenic 5.0%
!!! TAAAAGTTATTATAATTTTT+TGG - chr3_4:68692156-68692175 Msa0517210:intron 5.0%
TGCTGCCAGAAAACCTAAGC+TGG + chr3_4:68682804-68682823 None:intergenic 50.0%
ACACACCCGCACGCAAAATA+TGG + chr3_4:68683510-68683529 None:intergenic 50.0%
GGGAGAGAAAGAGAGTGAAG+GGG - chr3_4:68683676-68683695 Msa0517210:intron 50.0%
TGAGTACTCAGCAGGTACAG+TGG + chr3_4:68683737-68683756 None:intergenic 50.0%
TTCGGCTATAGCATCTGCAC+AGG - chr3_4:68683992-68684011 Msa0517210:intron 50.0%
TCGGCTATAGCATCTGCACA+GGG - chr3_4:68683993-68684012 Msa0517210:intron 50.0%
! AGGGCAGTGACTGCGATTTT+GGG - chr3_4:68684012-68684031 Msa0517210:intron 50.0%
GCACTACTTCCTTATCAGGG+TGG - chr3_4:68684112-68684131 Msa0517210:intron 50.0%
ATTGTGGTCCCACCCTGATA+AGG + chr3_4:68684124-68684143 None:intergenic 50.0%
TTATCAGGGTGGGACCACAA+TGG - chr3_4:68684123-68684142 Msa0517210:intron 50.0%
AACCACTGCCCTTAGGATAC+TGG + chr3_4:68685509-68685528 None:intergenic 50.0%
CTGTGCAACGGAAAAAGCCA+AGG + chr3_4:68687528-68687547 None:intergenic 50.0%
ATGGCAAAGGAGGTTTCTCC+TGG + chr3_4:68687781-68687800 None:intergenic 50.0%
CCAGGAATGAATGGCAAAGG+AGG + chr3_4:68687791-68687810 None:intergenic 50.0%
CCTCCTTTGCCATTCATTCC+TGG - chr3_4:68687788-68687807 Msa0517210:intron 50.0%
!! TCAGGCATCGTTGATTCCGT+TGG - chr3_4:68687821-68687840 Msa0517210:intron 50.0%
GCAACCAAATCACAACCCTC+CGG + chr3_4:68688193-68688212 None:intergenic 50.0%
!! GGTTGTGATTTGGTTGCTGC+TGG - chr3_4:68688196-68688215 Msa0517210:intron 50.0%
!!! TTGCTAGTTTTGGGTGCAGC+AGG - chr3_4:68688394-68688413 Msa0517210:intron 50.0%
GGTCTTGCAGCTGTGCAAAT+TGG - chr3_4:68688424-68688443 Msa0517210:intron 50.0%
GATGTCCTGTATGACCCAGT+AGG - chr3_4:68689127-68689146 Msa0517210:intron 50.0%
TCATGAGCTTGCCTCCTACT+GGG + chr3_4:68689144-68689163 None:intergenic 50.0%
TTCATGAGCTTGCCTCCTAC+TGG + chr3_4:68689145-68689164 None:intergenic 50.0%
GCTATGTTAGCAGGGATGAC+AGG + chr3_4:68689235-68689254 None:intergenic 50.0%
CAGTTACATGCACCCGTAGT+AGG - chr3_4:68689576-68689595 Msa0517210:intron 50.0%
GAAACTGAGAGCTGAGACTG+GGG - chr3_4:68690272-68690291 Msa0517210:intron 50.0%
TGAGAGAACCTTACCCACCT+AGG + chr3_4:68690414-68690433 None:intergenic 50.0%
GTGGGTCTCACCACTTTATG+TGG - chr3_4:68690777-68690796 Msa0517210:intron 50.0%
CTCTCAAGGAGCTACTGTCT+TGG - chr3_4:68691035-68691054 Msa0517210:intron 50.0%
CAAGGAGCTACTGTCTTGGT+TGG - chr3_4:68691039-68691058 Msa0517210:intron 50.0%
TCATTCTTACGGCCTGTCAG+AGG - chr3_4:68691090-68691109 Msa0517210:intron 50.0%
! GGGATTTTCTGACCTCTGAC+AGG + chr3_4:68691105-68691124 None:intergenic 50.0%
AGTGGTTAGGGTGGGAAAGT+TGG - chr3_4:68691415-68691434 Msa0517210:intron 50.0%
CCTATCTCTGATGGCAGTGA+AGG + chr3_4:68691852-68691871 None:intergenic 50.0%
CCTTCACTGCCATCAGAGAT+AGG - chr3_4:68691849-68691868 Msa0517210:intron 50.0%
GAGAGGATCCGTGTGCTTAT+TGG + chr3_4:68692205-68692224 None:intergenic 50.0%
! ATTGATGGAGAGAGCACGGA+AGG + chr3_4:68692227-68692246 None:intergenic 50.0%
! CAGGGCAGTGACTGCGATTT+TGG - chr3_4:68684011-68684030 Msa0517210:intron 55.0%
AGCCAGTATCCTAAGGGCAG+TGG - chr3_4:68685504-68685523 Msa0517210:intron 55.0%
AACCAATGCCCTTAGGGCAC+TGG - chr3_4:68685636-68685655 Msa0517210:intron 55.0%
! AACCAGTGCCCTAAGGGCAT+TGG + chr3_4:68685641-68685660 None:intergenic 55.0%
CGTCTTCAACGCTCACCGTT+GGG + chr3_4:68687631-68687650 None:intergenic 55.0%
TCGTCTTCAACGCTCACCGT+TGG + chr3_4:68687632-68687651 None:intergenic 55.0%
!! GGAGCACTTGCTGTGGCATT+TGG - chr3_4:68688217-68688236 Msa0517210:intron 55.0%
!!! CTAGTTTTGGGTGCAGCAGG+AGG - chr3_4:68688397-68688416 Msa0517210:intron 55.0%
GTCCTGTATGACCCAGTAGG+AGG - chr3_4:68689130-68689149 Msa0517210:intron 55.0%
TGCCTCCTACTGGGTCATAC+AGG + chr3_4:68689135-68689154 None:intergenic 55.0%
TGGGTCTGCTAGCCCTACTA+CGG + chr3_4:68689592-68689611 None:intergenic 55.0%
TTGTAGGTTTCGCGTGCCGG+AGG - chr3_4:68688174-68688193 Msa0517210:intron 60.0%
TGTAGGTTTCGCGTGCCGGA+GGG - chr3_4:68688175-68688194 Msa0517210:intron 60.0%
CGTGCCGGAGGGTTGTGATT+TGG - chr3_4:68688186-68688205 Msa0517210:intron 60.0%
! TGCTGCTGGAGCACTTGCTG+TGG - chr3_4:68688210-68688229 Msa0517210:intron 60.0%
TTTGGGTGCAGCAGGAGGTG+TGG - chr3_4:68688402-68688421 Msa0517210:intron 60.0%
! TTGGGTGCAGCAGGAGGTGT+GGG - chr3_4:68688403-68688422 Msa0517210:intron 60.0%
GGGTCTGCTAGCCCTACTAC+GGG + chr3_4:68689591-68689610 None:intergenic 60.0%
GATGGCAGTGAAGGCGAGGT+TGG + chr3_4:68691843-68691862 None:intergenic 60.0%
CTCTGATGGCAGTGAAGGCG+AGG + chr3_4:68691847-68691866 None:intergenic 60.0%
AGAGAGATGTGCAGCACGCG+TGG + chr3_4:68692123-68692142 None:intergenic 60.0%
! TGGAGAGAGCACGGAAGGAG+AGG + chr3_4:68692222-68692241 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 68682788 68692460 68682788 ID=Msa0517210;Name=Msa0517210
chr3_4 mRNA 68682788 68692460 68682788 ID=Msa0517210-mRNA-1;Parent=Msa0517210;Name=Msa0517210-mRNA-1;_AED=0.08;_eAED=0.08;_QI=128|1|1|1|0.83|0.71|7|529|346
chr3_4 exon 68682788 68683409 68682788 ID=Msa0517210-mRNA-1:exon:18223;Parent=Msa0517210-mRNA-1
chr3_4 exon 68684137 68684280 68684137 ID=Msa0517210-mRNA-1:exon:18222;Parent=Msa0517210-mRNA-1
chr3_4 exon 68685984 68686242 68685984 ID=Msa0517210-mRNA-1:exon:18221;Parent=Msa0517210-mRNA-1
chr3_4 exon 68686766 68686857 68686766 ID=Msa0517210-mRNA-1:exon:18220;Parent=Msa0517210-mRNA-1
chr3_4 exon 68686960 68687068 68686960 ID=Msa0517210-mRNA-1:exon:18219;Parent=Msa0517210-mRNA-1
chr3_4 exon 68687309 68687700 68687309 ID=Msa0517210-mRNA-1:exon:18218;Parent=Msa0517210-mRNA-1
chr3_4 exon 68692381 68692460 68692381 ID=Msa0517210-mRNA-1:exon:18217;Parent=Msa0517210-mRNA-1
chr3_4 five_prime_UTR 68692381 68692460 68692381 ID=Msa0517210-mRNA-1:five_prime_utr;Parent=Msa0517210-mRNA-1
chr3_4 five_prime_UTR 68687653 68687700 68687653 ID=Msa0517210-mRNA-1:five_prime_utr;Parent=Msa0517210-mRNA-1
chr3_4 CDS 68687309 68687652 68687309 ID=Msa0517210-mRNA-1:cds;Parent=Msa0517210-mRNA-1
chr3_4 CDS 68686960 68687068 68686960 ID=Msa0517210-mRNA-1:cds;Parent=Msa0517210-mRNA-1
chr3_4 CDS 68686766 68686857 68686766 ID=Msa0517210-mRNA-1:cds;Parent=Msa0517210-mRNA-1
chr3_4 CDS 68685984 68686242 68685984 ID=Msa0517210-mRNA-1:cds;Parent=Msa0517210-mRNA-1
chr3_4 CDS 68684137 68684280 68684137 ID=Msa0517210-mRNA-1:cds;Parent=Msa0517210-mRNA-1
chr3_4 CDS 68683317 68683409 68683317 ID=Msa0517210-mRNA-1:cds;Parent=Msa0517210-mRNA-1
chr3_4 three_prime_UTR 68682788 68683316 68682788 ID=Msa0517210-mRNA-1:three_prime_utr;Parent=Msa0517210-mRNA-1
Gene Sequence

>Msa0517210

ATGGAAGCACTTTTGTGCAGAAAATTGGGTGACCCAACGGTGAGCGTTGAAGACGAAAACAGCCCAATAATCATATCCAAGAATCACCCTATCCCTCAATTGGATTCTCCTACATCGGTTAGAGTTAGGATCAAAGCCACAAGCTTGAATTTCGCTAATTACTTGCAGATTCTTGGAAAGTACCAGGAGAAACCTCCTTTGCCATTCATTCCTGGATCCGATTTTTCAGGCATCGTTGATTCCGTTGGTTCCAATGTTACCAATTTCCGTGTTGGTGATCCTGTTTGTTCCTTTGCTGCTCTTGGATCTTATGCTCAGTATGTAGTTGTTGATCAGACTCAATTGTTTCGCGTGCCGGAGGGTTGTGATTTGGTTGCTGCTGGAGCACTTGCTGTGGCATTTGGCACTTCACATGTTGGACTTGTTCATAGAGCTCAGTTGAAATCTGGTCAGGTATTGCTAGTTTTGGGTGCAGCAGGAGGTGTGGGTCTTGCAGCTGTGCAAATTGGAAAAGCATGTGGGGCTATTGTCATTGCTGTTGCTAGGGGAGCTGAAAAGGTGCAGCTCTTGAAATCAATGGGTGTTGATCATGTGGTGGACTTGGGTAATGAAAATGTGACTGAGAGTGTGAAAGAGTTCCTTAAGGTCAAAAGGCTTAAAGGGATTGATGTCCTGTATGACCCAGTAGGAGGCAAGCTCATGAAAGAATCTTTGCGGCTTCTGAAATGGGGAGCGAACATTCTAATAATTGGGTTTGCAAGTGGAGAAATTCCTGTCATCCCTGCTAACATAGCTCTTGTTAAGAATTGGACAGTACATGGACTTTATTGGGGTAGTTACAAAATACATCGCCCAGCTGTTCTTGAAGATTCTCTCAAGGAGCTACTGTCTTGGTTGGCAAAAGGCTTGATTTCCGTTCACATTTCTCATTCTTACGGCCTGTCAGAGGCCAACCTCGCCTTCACTGCCATCAGAGATAGGAAAGCTATAGGGAAGGTGATGATTGTATTCGATGAGAAAATTACAAGATCTAAGCTGTGA

Protein sequence

>Msa0517210

MEALLCRKLGDPTVSVEDENSPIIISKNHPIPQLDSPTSVRVRIKATSLNFANYLQILGKYQEKPPLPFIPGSDFSGIVDSVGSNVTNFRVGDPVCSFAALGSYAQYVVVDQTQLFRVPEGCDLVAAGALAVAFGTSHVGLVHRAQLKSGQVLLVLGAAGGVGLAAVQIGKACGAIVIAVARGAEKVQLLKSMGVDHVVDLGNENVTESVKEFLKVKRLKGIDVLYDPVGGKLMKESLRLLKWGANILIIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPAVLEDSLKELLSWLAKGLISVHISHSYGLSEANLAFTAIRDRKAIGKVMIVFDEKITRSKL*