AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0474430

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0474430 MtrunA17_Chr3g0131181 97.428 311 8 0 4 314 185 495 0.0 625
Msa0474430 MtrunA17_Chr8g0385341 86.174 311 43 0 4 314 186 496 0.0 563
Msa0474430 MtrunA17_Chr1g0200601 75.081 309 73 3 4 308 186 494 3.64e-176 496
Msa0474430 MtrunA17_Chr5g0448721 72.039 304 83 1 4 305 252 555 1.05e-165 472
Msa0474430 MtrunA17_Chr1g0170281 71.061 311 87 2 1 308 271 581 1.69e-163 468
Msa0474430 MtrunA17_Chr1g0176751 67.419 310 97 1 4 309 280 589 6.96e-155 446
Msa0474430 MtrunA17_Chr7g0267751 65.461 304 105 0 4 307 291 594 1.44e-149 433
Msa0474430 MtrunA17_Chr1g0176421 63.323 319 85 1 4 290 317 635 1.49e-144 421
Msa0474430 MtrunA17_Chr0c02g0489761 63.986 286 102 1 4 288 234 519 3.03e-135 394
Msa0474430 MtrunA17_Chr8g0387671 63.014 292 107 1 4 294 222 513 2.28e-133 389
Msa0474430 MtrunA17_Chr3g0098951 63.823 293 97 2 4 288 240 531 7.46e-132 385
Msa0474430 MtrunA17_Chr5g0397101 63.636 286 102 2 4 288 223 507 7.74e-131 382
Msa0474430 MtrunA17_Chr5g0444171 62.807 285 105 1 4 287 248 532 2.62e-130 382
Msa0474430 MtrunA17_Chr5g0441691 61.972 284 107 1 6 288 226 509 3.51e-130 380
Msa0474430 MtrunA17_Chr1g0157131 63.287 286 104 1 4 288 230 515 3.58e-130 380
Msa0474430 MtrunA17_Chr4g0074811 62.807 285 105 1 4 287 247 531 1.78e-129 379
Msa0474430 MtrunA17_Chr4g0059951 57.840 287 119 2 4 288 229 515 7.22e-118 350
Msa0474430 MtrunA17_Chr7g0242561 54.355 287 129 1 4 288 212 498 1.18e-111 333
Msa0474430 MtrunA17_Chr7g0257751 52.613 287 132 2 4 287 214 499 1.22e-106 321
Msa0474430 MtrunA17_Chr1g0173541 51.748 286 134 2 6 288 210 494 2.73e-106 320
Msa0474430 MtrunA17_Chr4g0074791 55.789 285 114 3 4 287 252 525 9.59e-105 316
Msa0474430 MtrunA17_Chr4g0033371 47.917 288 149 1 1 287 225 512 1.69e-97 298
Msa0474430 MtrunA17_Chr5g0405421 42.810 306 161 5 6 303 259 558 1.04e-80 254
Msa0474430 MtrunA17_Chr8g0374701 37.631 287 169 5 4 284 288 570 1.69e-61 205
Msa0474430 MtrunA17_Chr4g0045261 36.120 299 177 6 4 296 297 587 1.45e-60 202
Msa0474430 MtrunA17_Chr7g0267771 51.596 188 82 2 4 191 244 422 8.92e-60 198
Msa0474430 MtrunA17_Chr5g0402551 36.242 298 176 6 4 293 294 585 2.42e-58 197
Msa0474430 MtrunA17_Chr7g0256001 34.448 299 183 5 4 296 301 592 9.15e-55 187
Msa0474430 MtrunA17_Chr3g0127571 38.057 247 143 5 6 246 300 542 2.96e-53 183
Msa0474430 MtrunA17_Chr7g0276111 35.484 248 153 3 4 246 304 549 6.01e-51 177
Msa0474430 MtrunA17_Chr5g0444191 61.983 121 43 1 4 124 64 181 7.87e-50 164
Msa0474430 MtrunA17_Chr8g0355131 32.907 313 178 6 4 286 199 509 2.31e-39 145
Msa0474430 MtrunA17_Chr1g0203881 57.426 101 43 0 9 109 202 302 4.32e-31 122
Msa0474430 MtrunA17_Chr1g0190131 51.402 107 51 1 2 107 159 265 7.19e-31 117
Msa0474430 MtrunA17_Chr5g0441771 53.846 104 28 1 72 175 18 101 2.10e-29 108
Msa0474430 MtrunA17_Chr5g0440931 36.986 146 89 2 142 284 1 146 2.85e-25 99.0
Msa0474430 MtrunA17_Chr3g0093271 36.301 146 90 2 142 284 52 197 3.89e-25 100
Msa0474430 MtrunA17_Chr7g0254731 36.301 146 90 2 142 284 1 146 3.94e-25 98.6
Msa0474430 MtrunA17_Chr6g0460211 36.301 146 90 2 142 284 1 146 1.10e-24 97.4
Msa0474430 MtrunA17_Chr1g0188171 37.671 146 88 2 142 284 1 146 1.20e-24 97.4
Msa0474430 MtrunA17_Chr5g0441781 56.000 75 32 1 215 288 1 75 5.77e-24 93.6
Msa0474430 MtrunA17_Chr3g0132591 45.098 102 56 0 6 107 260 361 1.23e-23 100
Msa0474430 MtrunA17_Chr1g0166281 35.616 146 91 2 142 284 1 146 1.65e-22 91.7
Msa0474430 MtrunA17_Chr7g0274941 39.655 116 63 2 7 115 173 288 3.57e-21 91.7
Msa0474430 MtrunA17_Chr7g0245231 35.915 142 88 2 146 284 23 164 6.81e-20 85.1
Msa0474430 MtrunA17_Chr6g0450921 35.294 136 85 2 154 286 30 165 4.18e-19 83.2
Msa0474430 MtrunA17_Chr8g0366401 33.566 143 89 2 145 281 9 151 9.98e-19 81.6
Msa0474430 MtrunA17_Chr7g0244561 38.261 115 65 3 5 117 173 283 1.89e-18 85.1
Msa0474430 MtrunA17_Chr4g0001331 45.455 99 48 3 10 106 180 274 4.20e-18 84.3
Msa0474430 MtrunA17_Chr4g0062221 29.932 147 98 3 145 286 3 149 1.39e-17 79.0
Msa0474430 MtrunA17_Chr2g0304111 41.748 103 54 4 5 105 179 277 8.83e-17 80.5
Msa0474430 MtrunA17_Chr8g0346071 39.048 105 58 3 4 106 170 270 1.16e-16 80.1
Msa0474430 MtrunA17_Chr4g0013131 37.391 115 63 4 5 114 167 277 1.28e-16 80.1
Msa0474430 MtrunA17_Chr4g0033601 30.000 140 91 3 154 287 6 144 1.30e-16 75.5
Msa0474430 MtrunA17_Chr1g0185001 30.345 145 99 1 142 284 1 145 1.63e-16 75.5
Msa0474430 MtrunA17_Chr7g0274101 34.932 146 92 2 142 284 1 146 2.58e-16 74.7
Msa0474430 MtrunA17_Chr5g0441011 38.739 111 62 3 5 113 169 275 8.93e-16 77.4
Msa0474430 MtrunA17_Chr6g0468751 31.472 197 106 6 10 197 177 353 1.36e-15 77.0
Msa0474430 MtrunA17_Chr3g0140631 38.235 102 60 2 9 109 192 291 1.41e-15 75.9
Msa0474430 MtrunA17_Chr4g0063881 40.351 114 61 4 4 115 164 272 1.89e-15 76.6
Msa0474430 MtrunA17_Chr5g0432491 34.615 104 62 3 5 106 179 278 1.96e-15 76.6
Msa0474430 MtrunA17_Chr4g0008561 35.135 111 69 3 9 117 178 287 4.06e-15 75.9
Msa0474430 MtrunA17_Chr2g0302431 39.806 103 56 4 5 105 176 274 4.64e-15 75.5
Msa0474430 MtrunA17_Chr6g0453681 31.771 192 112 6 10 197 177 353 4.77e-15 75.5
Msa0474430 MtrunA17_Chr1g0150321 40.404 99 53 3 10 106 173 267 5.43e-15 75.1
Msa0474430 MtrunA17_Chr4g0069301 36.538 104 60 3 5 106 182 281 6.31e-15 75.1
Msa0474430 MtrunA17_Chr2g0329371 31.206 141 90 2 154 287 65 205 1.03e-14 72.0
Msa0474430 MtrunA17_Chr5g0428031 42.718 103 53 4 5 105 163 261 1.23e-14 73.9
Msa0474430 MtrunA17_Chr2g0333821 42.424 99 51 3 10 106 174 268 1.23e-14 73.9
Msa0474430 MtrunA17_Chr7g0244521 35.922 103 60 3 5 105 167 265 2.06e-14 73.6
Msa0474430 MtrunA17_Chr3g0107051 35.577 104 61 3 5 106 176 275 2.09e-14 73.6
Msa0474430 MtrunA17_Chr3g0131061 36.190 105 63 2 9 109 159 263 2.47e-14 72.8
Msa0474430 MtrunA17_Chr5g0398751 28.169 142 97 3 146 284 5 144 2.53e-14 69.3
Msa0474430 MtrunA17_Chr3g0135951 40.196 102 56 3 9 106 301 401 3.74e-14 72.8
Msa0474430 MtrunA17_Chr2g0284011 34.286 105 63 3 4 106 166 266 3.79e-14 72.8
Msa0474430 MtrunA17_Chr8g0368681 30.345 145 96 3 147 286 6 150 3.95e-14 68.9
Msa0474430 MtrunA17_Chr4g0064231 29.560 159 91 3 154 291 65 223 3.99e-14 70.5
Msa0474430 MtrunA17_Chr3g0132671 37.500 104 59 2 4 105 201 300 5.37e-14 72.4
Msa0474430 MtrunA17_Chr5g0432471 35.922 103 60 3 5 105 167 265 7.45e-14 72.0
Msa0474430 MtrunA17_Chr2g0284031 32.692 104 64 3 5 106 186 285 7.47e-14 72.0
Msa0474430 MtrunA17_Chr6g0478601 43.617 94 43 3 10 98 301 389 8.33e-14 71.6
Msa0474430 MtrunA17_Chr4g0044961 28.736 174 115 4 115 284 21 189 1.28e-13 68.6
Msa0474430 MtrunA17_Chr1g0205421 35.922 103 60 3 5 105 167 265 1.61e-13 70.9
Msa0474430 MtrunA17_Chr8g0353621 34.314 102 64 2 9 109 165 264 1.75e-13 69.3
Msa0474430 MtrunA17_Chr8g0351491 34.314 102 64 2 9 109 171 270 2.17e-13 69.3
Msa0474430 MtrunA17_Chr5g0399911 42.000 100 54 4 10 105 175 274 2.34e-13 69.7
Msa0474430 MtrunA17_Chr8g0385281 34.906 106 65 2 8 109 159 264 2.57e-13 69.7
Msa0474430 MtrunA17_Chr7g0245911 29.452 146 91 3 154 287 48 193 4.73e-13 67.0
Msa0474430 MtrunA17_Chr8g0391691 34.043 141 88 3 152 288 35 174 5.33e-13 66.6
Msa0474430 MtrunA17_Chr1g0170551 29.091 110 73 2 2 110 156 261 5.97e-13 69.7
Msa0474430 MtrunA17_Chr3g0123791 36.538 104 62 3 9 108 160 263 6.22e-13 68.6
Msa0474430 MtrunA17_Chr2g0277501 33.333 105 66 2 9 109 159 263 6.29e-13 68.6
Msa0474430 MtrunA17_Chr2g0299781 37.864 103 61 2 9 108 320 422 6.46e-13 68.9
Msa0474430 MtrunA17_Chr1g0183651 43.750 80 44 1 9 87 318 397 8.41e-13 68.9
Msa0474430 MtrunA17_Chr5g0428981 42.453 106 56 3 9 110 951 1055 9.59e-13 68.9
Msa0474430 MtrunA17_Chr3g0125381 34.314 102 64 2 9 109 110 209 1.41e-12 65.9
Msa0474430 MtrunA17_Chr1g0167351 39.216 102 57 3 9 106 310 410 1.73e-12 67.8
Msa0474430 MtrunA17_Chr8g0381821 36.190 105 63 3 9 109 159 263 1.89e-12 67.0
Msa0474430 MtrunA17_Chr4g0018201 42.727 110 50 4 9 110 947 1051 1.90e-12 68.2
Msa0474430 MtrunA17_Chr1g0167311 40.196 102 55 4 9 106 315 414 2.36e-12 67.4
Msa0474430 MtrunA17_Chr7g0256171 30.986 142 91 3 152 287 4 144 2.45e-12 63.9
Msa0474430 MtrunA17_Chr5g0426521 35.294 102 62 2 10 107 160 261 2.99e-12 66.6
Msa0474430 MtrunA17_Chr7g0245371 27.211 147 92 2 154 285 25 171 3.15e-12 64.3
Msa0474430 MtrunA17_Chr8g0380661 33.981 103 64 3 9 107 156 258 3.40e-12 66.2
Msa0474430 MtrunA17_Chr5g0434951 31.387 137 84 4 154 284 5 137 4.01e-12 62.8
Msa0474430 MtrunA17_Chr1g0187581 38.235 102 58 3 9 106 316 416 4.48e-12 66.6
Msa0474430 MtrunA17_Chr1g0153321 41.176 102 55 3 9 106 308 408 4.56e-12 66.6
Msa0474430 MtrunA17_Chr1g0161211 34.043 141 88 3 154 290 47 186 8.60e-12 63.5
Msa0474430 MtrunA17_Chr4g0051191 36.719 128 54 6 6 113 314 434 9.06e-12 65.5
Msa0474430 MtrunA17_Chr7g0261491 42.500 80 45 1 9 87 318 397 1.50e-11 65.1
Msa0474430 MtrunA17_Chr6g0482731 28.889 135 91 3 154 284 27 160 1.56e-11 62.0
Msa0474430 MtrunA17_Chr3g0116151 29.197 137 93 2 152 285 5 140 1.58e-11 61.2
Msa0474430 MtrunA17_Chr3g0116141 29.197 137 93 2 152 285 4 139 1.75e-11 61.2
Msa0474430 MtrunA17_Chr2g0321841 35.577 104 63 2 4 106 158 258 1.94e-11 65.1
Msa0474430 MtrunA17_Chr8g0392951 28.889 135 90 2 154 284 25 157 2.75e-11 61.2
Msa0474430 MtrunA17_Chr4g0057651 30.709 127 84 2 161 284 14 139 2.95e-11 60.5
Msa0474430 MtrunA17_Chr5g0402361 31.618 136 91 1 154 287 49 184 3.45e-11 63.5
Msa0474430 MtrunA17_Chr8g0351681 26.667 150 99 3 149 287 45 194 3.64e-11 61.6
Msa0474430 MtrunA17_Chr7g0258051 30.400 125 72 4 4 117 170 290 4.39e-11 63.5
Msa0474430 MtrunA17_Chr1g0169581 28.169 142 89 4 154 286 5 142 4.65e-11 60.1
Msa0474430 MtrunA17_Chr5g0402331 31.387 137 91 2 154 287 49 185 7.85e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0474430 AT1G35670.1 76.774 310 68 3 8 314 186 494 1.22e-175 496
Msa0474430 AT4G09570.1 76.974 304 66 3 8 308 185 487 5.98e-173 489
Msa0474430 AT5G23580.1 74.837 306 74 1 4 306 178 483 7.94e-167 473
Msa0474430 AT5G04870.1 70.820 305 89 0 4 308 306 610 4.72e-162 465
Msa0474430 AT4G35310.2 70.066 304 89 1 4 305 253 556 5.92e-161 461
Msa0474430 AT4G35310.1 70.066 304 89 1 4 305 253 556 5.92e-161 461
Msa0474430 AT2G17290.1 70.569 299 88 0 4 302 241 539 1.23e-160 459
Msa0474430 AT2G17290.2 70.569 299 88 0 4 302 241 539 1.23e-160 459
Msa0474430 AT3G10660.2 73.333 285 76 0 4 288 342 626 5.69e-160 461
Msa0474430 AT3G10660.1 73.333 285 76 0 4 288 342 626 5.69e-160 461
Msa0474430 AT4G38230.1 70.805 298 84 1 4 301 36 330 1.05e-158 447
Msa0474430 AT4G38230.4 70.569 299 85 1 4 302 180 475 2.27e-157 449
Msa0474430 AT4G38230.3 70.569 299 85 1 4 302 180 475 2.27e-157 449
Msa0474430 AT4G38230.2 70.569 299 85 1 4 302 210 505 5.51e-157 449
Msa0474430 AT2G38910.1 69.966 293 87 1 4 295 290 582 1.63e-152 440
Msa0474430 AT5G19360.1 65.385 286 98 1 4 288 224 509 1.07e-136 397
Msa0474430 AT5G12180.1 64.685 286 100 1 4 288 229 514 4.89e-136 396
Msa0474430 AT1G76040.1 63.287 286 103 2 4 288 30 314 9.92e-135 385
Msa0474430 AT1G76040.4 63.287 286 103 2 4 288 30 314 9.92e-135 385
Msa0474430 AT1G50700.1 63.860 285 102 1 5 288 230 514 7.36e-134 390
Msa0474430 AT3G20410.2 63.287 286 104 1 4 288 247 532 7.63e-133 388
Msa0474430 AT3G20410.1 63.287 286 104 1 4 288 247 532 7.63e-133 388
Msa0474430 AT4G23650.1 62.245 294 108 2 6 296 236 529 2.31e-132 387
Msa0474430 AT1G76040.2 63.287 286 103 2 4 288 268 552 1.18e-131 386
Msa0474430 AT4G04720.2 63.636 286 102 2 4 288 236 520 3.84e-131 384
Msa0474430 AT4G04720.1 63.636 286 102 2 4 288 236 520 3.84e-131 384
Msa0474430 AT4G21940.1 62.105 285 106 2 4 287 258 541 1.68e-130 383
Msa0474430 AT4G21940.2 62.105 285 106 2 4 287 258 541 2.47e-130 382
Msa0474430 AT1G50700.2 58.521 311 102 2 5 288 230 540 1.33e-127 375
Msa0474430 AT1G61950.1 60.071 283 112 1 4 285 255 537 1.20e-122 363
Msa0474430 AT4G04740.4 59.091 286 115 2 4 288 225 509 7.43e-119 352
Msa0474430 AT4G04740.6 59.091 286 115 2 4 288 225 509 7.43e-119 352
Msa0474430 AT4G04740.5 59.091 286 115 2 4 288 225 509 7.43e-119 352
Msa0474430 AT4G04740.3 59.091 286 115 2 4 288 225 509 7.43e-119 352
Msa0474430 AT4G04740.1 59.091 286 115 2 4 288 225 509 7.43e-119 352
Msa0474430 AT4G04740.7 59.091 286 115 2 4 288 225 509 7.43e-119 352
Msa0474430 AT3G51850.1 56.098 287 124 1 4 288 210 496 1.75e-113 338
Msa0474430 AT4G04710.2 60.071 283 104 4 6 287 198 472 1.34e-112 335
Msa0474430 AT4G04710.3 60.071 283 104 4 6 287 184 458 1.76e-112 334
Msa0474430 AT5G12480.2 54.514 288 126 2 4 287 121 407 3.89e-112 332
Msa0474430 AT1G76040.3 65.126 238 82 1 4 241 268 504 5.56e-112 334
Msa0474430 AT4G04710.1 58.276 290 111 3 6 287 198 485 1.34e-111 333
Msa0474430 AT1G50700.3 64.681 235 83 0 5 239 230 464 8.64e-111 330
Msa0474430 AT5G12480.1 54.325 289 127 2 4 288 215 502 1.15e-110 332
Msa0474430 AT4G04740.2 59.108 269 108 2 4 271 225 492 1.90e-110 331
Msa0474430 AT4G04710.4 57.877 292 111 4 6 287 198 487 1.05e-109 328
Msa0474430 AT1G18890.1 55.789 285 124 2 6 288 221 505 2.23e-109 328
Msa0474430 AT4G21940.3 63.983 236 84 1 4 239 258 492 2.35e-109 327
Msa0474430 AT1G74740.1 52.396 313 146 3 4 313 215 527 4.53e-109 328
Msa0474430 AT3G57530.1 53.147 286 133 1 4 288 219 504 5.18e-107 322
Msa0474430 AT5G19450.2 53.448 290 128 3 4 288 213 500 2.25e-106 320
Msa0474430 AT5G19450.1 53.448 290 128 3 4 288 213 500 2.25e-106 320
Msa0474430 AT4G04695.1 54.545 286 128 2 4 288 188 472 6.14e-106 318
Msa0474430 AT3G51850.2 55.556 270 118 1 4 271 210 479 8.56e-105 315
Msa0474430 AT2G41860.1 51.203 291 132 2 4 288 210 496 6.11e-100 304
Msa0474430 AT2G41860.2 51.211 289 131 2 6 288 212 496 1.15e-99 303
Msa0474430 AT4G04700.1 51.943 283 134 2 4 285 188 469 3.04e-97 295
Msa0474430 AT2G31500.1 46.735 291 150 1 3 288 221 511 4.72e-95 293
Msa0474430 AT2G35890.2 60.360 222 87 1 4 224 288 509 8.09e-93 285
Msa0474430 AT2G35890.1 60.360 222 87 1 4 224 288 509 8.09e-93 285
Msa0474430 AT3G51850.3 56.373 204 89 0 4 207 210 413 3.71e-80 249
Msa0474430 AT2G17890.1 42.414 290 156 3 6 288 268 553 1.46e-79 252
Msa0474430 AT3G57530.2 56.853 197 85 0 4 200 219 415 6.59e-77 241
Msa0474430 AT5G66210.1 42.069 290 157 3 6 288 222 507 9.41e-76 241
Msa0474430 AT5G66210.2 42.069 290 157 3 6 288 222 507 9.41e-76 241
Msa0474430 AT4G36070.1 40.345 290 162 3 6 288 231 516 7.35e-75 239
Msa0474430 AT4G36070.2 40.345 290 162 3 6 288 231 516 1.23e-74 239
Msa0474430 AT5G66210.3 43.820 267 141 3 6 263 222 488 7.74e-72 230
Msa0474430 AT5G66210.5 44.177 249 132 2 6 247 222 470 3.75e-71 228
Msa0474430 AT3G50530.1 35.548 301 180 6 4 298 308 600 4.22e-61 205
Msa0474430 AT3G50530.2 35.548 301 180 6 4 298 339 631 4.49e-61 205
Msa0474430 AT5G66210.6 46.667 195 103 1 6 199 222 416 7.61e-58 192
Msa0474430 AT5G66210.4 46.667 195 103 1 6 199 222 416 7.61e-58 192
Msa0474430 AT1G49580.1 35.540 287 176 4 4 284 310 593 2.79e-56 192
Msa0474430 AT2G41140.1 33.445 299 185 6 4 296 283 573 2.23e-54 186
Msa0474430 AT3G19100.1 34.768 302 184 6 4 299 304 598 4.24e-54 186
Msa0474430 AT3G56760.1 32.776 299 187 6 4 296 284 574 6.14e-53 182
Msa0474430 AT5G24430.1 37.398 246 146 4 6 246 305 547 2.63e-50 176
Msa0474430 AT3G49370.1 33.557 298 182 7 6 298 304 590 2.45e-49 173
Msa0474430 AT2G46700.2 33.916 286 178 4 4 284 122 401 4.67e-48 166
Msa0474430 AT2G46700.3 33.916 286 178 4 4 284 122 401 4.67e-48 166
Msa0474430 AT2G46700.1 33.916 286 178 4 4 284 303 582 1.02e-46 166
Msa0474430 AT1G12580.1 55.340 103 46 0 4 106 200 302 4.64e-31 122
Msa0474430 AT1G08650.1 50.505 99 48 1 9 106 175 273 2.18e-29 114
Msa0474430 AT1G12680.1 50.000 104 52 0 4 107 253 356 7.45e-27 110
Msa0474430 AT1G08650.2 48.936 94 47 1 9 101 175 268 1.38e-25 103
Msa0474430 AT2G27030.3 33.140 172 109 3 142 307 1 172 1.69e-25 100
Msa0474430 AT3G04530.1 44.037 109 60 1 1 108 163 271 3.94e-25 102
Msa0474430 AT3G56800.1 36.986 146 89 2 142 284 1 146 7.67e-25 98.2
Msa0474430 AT2G41110.1 36.986 146 89 2 142 284 1 146 7.67e-25 98.2
Msa0474430 AT2G27030.1 36.986 146 89 2 142 284 1 146 7.67e-25 98.2
Msa0474430 AT3G43810.2 36.301 146 90 2 142 284 1 146 1.12e-24 99.8
Msa0474430 AT5G21274.1 36.301 146 90 2 142 284 1 146 1.20e-24 97.8
Msa0474430 AT3G43810.1 36.301 146 90 2 142 284 1 146 1.51e-24 97.4
Msa0474430 AT1G66410.1 36.301 146 90 2 142 284 1 146 2.30e-24 97.1
Msa0474430 AT5G37780.1 36.301 146 90 2 142 284 1 146 2.30e-24 97.1
Msa0474430 AT2G41110.2 34.177 158 89 3 142 284 1 158 5.23e-22 90.9
Msa0474430 AT4G14640.1 36.620 142 87 2 146 284 6 147 1.28e-21 89.7
Msa0474430 AT3G22930.1 36.364 143 88 2 145 284 27 169 1.54e-21 90.1
Msa0474430 AT5G37780.2 32.919 161 90 3 142 284 1 161 1.45e-20 87.0
Msa0474430 AT3G50360.1 35.294 136 85 2 154 286 28 163 5.77e-20 85.9
Msa0474430 AT1G05990.1 35.211 142 82 3 154 287 6 145 6.32e-20 85.1
Msa0474430 AT1G66410.2 33.974 156 90 3 142 284 1 156 1.52e-19 84.3
Msa0474430 AT1G32250.1 34.228 149 89 3 142 281 5 153 2.47e-19 84.0
Msa0474430 AT5G37780.3 30.814 172 90 3 142 284 1 172 3.18e-19 84.0
Msa0474430 AT1G30270.3 41.441 111 59 4 5 113 90 196 7.26e-19 86.7
Msa0474430 AT4G30960.1 43.269 104 53 4 5 106 179 278 7.42e-19 87.0
Msa0474430 AT1G30270.1 41.441 111 59 4 5 113 187 293 7.85e-19 87.0
Msa0474430 AT1G30270.2 41.441 111 59 4 5 113 187 293 1.17e-18 86.7
Msa0474430 AT2G41100.7 28.485 165 98 3 140 284 53 217 1.45e-18 84.7
Msa0474430 AT2G41100.6 28.485 165 98 3 140 284 53 217 1.45e-18 84.7
Msa0474430 AT2G41100.3 28.485 165 98 3 140 284 53 217 1.45e-18 84.7
Msa0474430 AT3G59440.1 31.655 139 91 1 154 288 52 190 2.27e-18 82.0
Msa0474430 AT5G37780.4 35.878 131 76 3 157 284 8 133 2.91e-18 80.1
Msa0474430 AT2G41100.4 28.485 165 98 3 140 284 88 252 2.91e-18 84.3
Msa0474430 AT2G41100.4 29.940 167 98 3 142 289 1 167 1.15e-17 82.4
Msa0474430 AT2G41100.1 28.485 165 98 3 140 284 88 252 2.91e-18 84.3
Msa0474430 AT2G41100.1 29.940 167 98 3 142 289 1 167 1.15e-17 82.4
Msa0474430 AT5G10930.1 39.316 117 60 4 10 119 173 285 5.98e-18 84.3
Msa0474430 AT2G41090.1 31.788 151 99 2 142 290 1 149 6.09e-18 80.9
Msa0474430 AT4G14640.2 37.190 121 73 2 167 284 9 129 7.56e-18 79.0
Msa0474430 AT4G03290.1 33.803 142 86 3 154 287 6 147 3.19e-17 77.8
Msa0474430 AT3G43810.4 36.364 110 67 2 178 284 1 110 8.19e-17 75.5
Msa0474430 AT3G43810.3 36.364 110 67 2 178 284 1 110 8.19e-17 75.5
Msa0474430 AT2G43290.1 30.556 144 90 2 154 287 66 209 1.05e-16 77.8
Msa0474430 AT1G48260.1 42.593 108 54 3 5 109 167 269 1.33e-16 80.5
Msa0474430 AT2G30360.1 35.238 105 62 3 5 107 178 278 1.41e-16 80.1
Msa0474430 AT5G35410.2 42.857 105 52 5 4 105 164 263 1.47e-16 79.7
Msa0474430 AT1G48260.2 42.593 108 54 3 5 109 82 184 1.48e-16 79.7
Msa0474430 AT1G48260.4 42.593 108 54 3 5 109 82 184 1.48e-16 79.7
Msa0474430 AT1G48260.3 42.593 108 54 3 5 109 82 184 1.48e-16 79.7
Msa0474430 AT1G48260.5 42.593 108 54 3 5 109 82 184 1.48e-16 79.7
Msa0474430 AT4G37010.2 31.429 140 93 2 154 290 32 171 1.53e-16 76.3
Msa0474430 AT4G37010.1 31.429 140 93 2 154 290 28 167 1.57e-16 76.3
Msa0474430 AT1G18530.1 34.028 144 90 3 148 286 2 145 2.01e-16 75.9
Msa0474430 AT5G35410.1 42.857 105 52 5 4 105 164 263 2.03e-16 79.7
Msa0474430 AT5G25110.1 39.623 106 58 3 10 113 203 304 2.90e-16 79.7
Msa0474430 AT1G66410.4 35.455 110 68 2 178 284 1 110 4.17e-16 73.6
Msa0474430 AT1G66410.3 35.455 110 68 2 178 284 1 110 4.17e-16 73.6
Msa0474430 AT5G58380.1 37.500 104 59 3 5 106 167 266 5.61e-16 78.6
Msa0474430 AT2G26980.5 40.566 106 57 3 10 113 175 276 6.87e-16 78.2
Msa0474430 AT2G26980.1 40.566 106 57 3 10 113 175 276 7.66e-16 77.8
Msa0474430 AT5G21326.1 39.423 104 57 3 5 106 169 268 8.05e-16 78.2
Msa0474430 AT2G26980.4 40.566 106 57 3 10 113 185 286 9.24e-16 77.8
Msa0474430 AT2G26980.3 40.566 106 57 3 10 113 175 276 9.32e-16 77.8
Msa0474430 AT5G62310.1 48.936 94 38 3 9 97 943 1031 1.11e-15 78.2
Msa0474430 AT1G45160.2 40.000 110 53 4 5 106 851 955 1.17e-15 78.2
Msa0474430 AT5G39440.1 42.268 97 51 2 10 105 177 269 1.28e-15 77.8
Msa0474430 AT1G45160.1 40.000 110 53 4 5 106 851 955 1.43e-15 77.8
Msa0474430 AT3G01090.2 46.939 98 46 3 10 105 200 293 1.74e-15 77.4
Msa0474430 AT3G01090.3 44.898 98 48 2 10 105 177 270 1.86e-15 77.0
Msa0474430 AT3G01090.1 44.898 98 48 2 10 105 177 270 1.86e-15 77.0
Msa0474430 AT2G25880.2 37.255 102 61 2 9 109 148 247 2.28e-15 75.1
Msa0474430 AT2G25880.1 37.255 102 61 2 9 109 180 279 2.82e-15 75.1
Msa0474430 AT2G25880.4 37.255 102 61 2 9 109 193 292 3.60e-15 75.1
Msa0474430 AT4G32830.1 39.216 102 59 2 9 109 186 285 3.77e-15 75.1
Msa0474430 AT4G18700.1 34.615 104 62 3 5 106 181 280 3.89e-15 76.3
Msa0474430 AT1G01140.2 38.462 104 60 3 5 106 175 276 4.50e-15 75.9
Msa0474430 AT2G25880.3 37.255 102 61 2 9 109 241 340 6.19e-15 74.7
Msa0474430 AT2G34180.1 36.893 103 59 3 5 105 212 310 6.25e-15 75.5
Msa0474430 AT5G21222.1 40.196 102 55 3 10 109 174 271 6.31e-15 75.9
Msa0474430 AT5G21222.2 40.196 102 55 3 10 109 174 271 6.31e-15 75.9
Msa0474430 AT5G21222.4 40.196 102 55 3 10 109 174 271 6.31e-15 75.9
Msa0474430 AT5G21222.3 40.196 102 55 3 10 109 174 271 6.31e-15 75.9
Msa0474430 AT5G01810.1 35.577 104 61 2 5 106 167 266 1.02e-14 74.7
Msa0474430 AT5G01810.2 35.577 104 61 2 5 106 167 266 1.02e-14 74.7
Msa0474430 AT5G45820.1 35.577 104 61 3 5 106 167 266 1.78e-14 73.9
Msa0474430 AT5G01810.3 35.922 103 60 2 5 105 167 265 1.91e-14 73.6
Msa0474430 AT1G29230.1 36.735 98 56 3 10 105 234 327 2.19e-14 73.9
Msa0474430 AT3G03000.1 34.286 140 88 3 145 280 12 151 2.28e-14 70.1
Msa0474430 AT1G01140.1 39.423 104 57 4 5 106 175 274 2.29e-14 73.6
Msa0474430 AT1G01140.3 39.423 104 57 4 5 106 175 274 2.33e-14 73.6
Msa0474430 AT5G45810.1 34.615 104 62 3 5 106 183 282 2.51e-14 73.6
Msa0474430 AT2G25090.1 38.384 99 55 4 10 106 184 278 3.66e-14 73.2
Msa0474430 AT4G24400.2 40.187 107 58 4 5 109 163 265 3.80e-14 72.8
Msa0474430 AT5G44460.1 28.070 171 106 3 132 285 5 175 3.97e-14 70.1
Msa0474430 AT3G29160.3 44.898 98 48 3 10 105 178 271 4.50e-14 72.4
Msa0474430 AT5G57630.3 39.000 100 55 3 4 101 75 170 4.63e-14 72.0
Msa0474430 AT5G08590.1 34.146 123 75 3 9 127 159 279 4.78e-14 72.4
Msa0474430 AT5G08590.2 34.146 123 75 3 9 127 83 203 5.49e-14 71.2
Msa0474430 AT5G57630.1 39.000 100 55 3 4 101 163 258 5.65e-14 72.4
Msa0474430 AT4G14640.3 35.922 103 65 1 146 247 6 108 5.96e-14 67.8
Msa0474430 AT4G24400.1 40.187 107 58 4 5 109 163 265 6.23e-14 72.4
Msa0474430 AT5G57630.2 39.000 100 55 3 4 101 163 258 7.41e-14 72.0
Msa0474430 AT2G45490.1 33.333 102 65 2 9 109 177 276 7.97e-14 70.9
Msa0474430 AT3G29160.1 44.898 98 48 3 10 105 178 271 8.21e-14 72.4
Msa0474430 AT3G29160.2 44.898 98 48 3 10 105 178 271 8.21e-14 72.4
Msa0474430 AT1G03920.1 41.584 101 56 3 9 106 335 435 1.19e-13 72.0
Msa0474430 AT1G03920.3 41.584 101 56 3 9 106 335 435 1.19e-13 72.0
Msa0474430 AT3G17510.1 38.462 104 56 4 5 105 176 274 1.21e-13 71.6
Msa0474430 AT3G17510.2 38.462 104 56 4 5 105 96 194 1.29e-13 71.2
Msa0474430 AT4G12860.1 32.624 141 90 2 152 287 4 144 1.44e-13 67.8
Msa0474430 AT3G25600.1 30.070 143 95 2 149 286 8 150 1.54e-13 67.8
Msa0474430 AT1G03920.2 41.584 101 56 3 9 106 222 322 1.74e-13 71.2
Msa0474430 AT4G33080.2 40.385 104 58 2 9 108 301 404 3.03e-13 70.5
Msa0474430 AT4G33080.1 40.385 104 58 2 9 108 301 404 3.10e-13 70.5
Msa0474430 AT3G22930.2 34.951 103 66 1 145 246 27 129 3.46e-13 66.2
Msa0474430 AT1G30640.3 39.216 102 57 3 9 106 230 330 3.56e-13 70.1
Msa0474430 AT1G30640.2 39.216 102 57 3 9 106 323 423 3.78e-13 70.5
Msa0474430 AT1G30640.1 39.216 102 57 3 9 106 323 423 3.78e-13 70.5
Msa0474430 AT1G24620.1 32.432 148 95 3 145 288 29 175 4.27e-13 67.0
Msa0474430 AT4G20780.1 26.374 182 109 3 129 285 3 184 5.63e-13 67.0
Msa0474430 AT1G62820.1 28.169 142 97 3 146 284 6 145 8.66e-13 65.5
Msa0474430 AT3G10190.1 29.008 131 89 2 158 284 75 205 8.99e-13 66.6
Msa0474430 AT5G09890.1 40.196 102 56 3 9 106 304 404 1.12e-12 68.9
Msa0474430 AT5G09890.2 40.196 102 56 3 9 106 304 404 1.12e-12 68.9
Msa0474430 AT2G26980.2 43.023 86 43 3 10 93 175 256 1.22e-12 67.4
Msa0474430 AT2G15680.1 27.891 147 99 3 146 288 43 186 1.28e-12 65.9
Msa0474430 AT1G78290.3 36.538 104 62 3 10 109 160 263 2.02e-12 67.4
Msa0474430 AT1G78290.2 36.538 104 62 3 10 109 160 263 2.02e-12 67.4
Msa0474430 AT3G17850.1 41.489 94 45 3 9 97 1071 1159 2.09e-12 68.6
Msa0474430 AT3G61960.1 35.514 107 67 2 10 114 170 276 2.13e-12 68.2
Msa0474430 AT1G60940.1 33.962 106 66 2 8 109 158 263 2.44e-12 67.4
Msa0474430 AT1G60940.2 33.962 106 66 2 8 109 158 263 2.44e-12 67.4
Msa0474430 AT3G61960.2 35.514 107 67 2 10 114 170 276 2.58e-12 67.8
Msa0474430 AT1G10940.2 34.286 105 65 2 9 109 167 271 2.61e-12 67.4
Msa0474430 AT1G10940.1 34.286 105 65 2 9 109 159 263 2.96e-12 67.0
Msa0474430 AT3G51920.1 29.932 147 98 3 142 284 1 146 3.09e-12 63.9
Msa0474430 AT1G48490.4 41.489 94 45 3 9 97 1012 1100 3.96e-12 67.4
Msa0474430 AT1G12310.1 26.761 142 99 3 146 284 6 145 3.98e-12 63.5
Msa0474430 AT1G48490.3 41.489 94 45 3 9 97 1011 1099 4.06e-12 67.4
Msa0474430 AT1G48490.2 41.489 94 45 3 9 97 1011 1099 4.06e-12 67.4
Msa0474430 AT1G48490.1 41.489 94 45 3 9 97 1011 1099 4.06e-12 67.4
Msa0474430 AT1G66400.1 28.986 138 89 3 154 284 16 151 5.50e-12 63.5
Msa0474430 AT5G63650.1 33.962 106 66 2 8 109 158 263 5.58e-12 66.2
Msa0474430 AT4G40010.1 37.255 102 60 2 10 107 160 261 5.75e-12 66.2
Msa0474430 AT5G37770.1 28.966 145 92 4 154 289 18 160 8.24e-12 63.2
Msa0474430 AT5G37770.2 28.966 145 92 4 154 289 18 160 8.24e-12 63.2
Msa0474430 AT3G23310.1 39.216 102 57 3 9 106 321 421 9.19e-12 66.2
Msa0474430 AT4G14350.2 40.385 104 53 5 9 106 318 418 1.49e-11 65.5
Msa0474430 AT4G14350.1 40.385 104 53 5 9 106 318 418 1.49e-11 65.5
Msa0474430 AT4G14350.4 40.385 104 53 5 9 106 318 418 1.49e-11 65.5
Msa0474430 AT4G14350.3 40.385 104 53 5 9 106 318 418 1.51e-11 65.5
Msa0474430 AT1G76640.1 29.655 145 93 3 148 285 17 159 1.61e-11 62.0
Msa0474430 AT5G01820.1 36.538 104 60 3 5 106 177 276 1.64e-11 65.1
Msa0474430 AT2G20470.3 42.500 80 45 1 9 87 321 400 2.92e-11 64.7
Msa0474430 AT2G20470.2 42.500 80 45 1 9 87 321 400 3.17e-11 64.3
Msa0474430 AT2G20470.1 42.500 80 45 1 9 87 321 400 3.17e-11 64.3
Msa0474430 AT1G73630.1 29.851 134 87 4 154 284 21 150 4.67e-11 60.8
Msa0474430 AT3G07490.1 27.857 140 94 3 154 287 6 144 8.02e-11 60.1
Msa0474430 AT2G38490.1 34.951 103 61 3 5 105 183 281 9.86e-11 62.8

Find 94 sgRNAs with CRISPR-Local

Find 715 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATCACCAAATAATTATTTA+AGG 0.139372 3_3:-77340012 None:intergenic
TCGTTTCATGACAAACATTT+TGG 0.142292 3_3:-77340155 None:intergenic
TTAAGGTACAATAACTTAAT+TGG 0.163697 3_3:-77339995 None:intergenic
TTATTTGGTGATACAAATTT+TGG 0.177909 3_3:+77340022 Msa0474430:three_prime_UTR
ACCTCTGGCGCAACATAGTA+TGG 0.221577 3_3:-77333877 None:intergenic
CTATTAATAAAGACAAATTT+TGG 0.237598 3_3:-77340093 None:intergenic
CAGGATGGACAGATAGATTA+TGG 0.239141 3_3:+77339868 Msa0474430:intron
TAAGCGGGGTGCCTCCGTTT+TGG 0.239452 3_3:+77333965 Msa0474430:CDS
TTGTACCTTAAATAATTATT+TGG 0.249050 3_3:+77340007 Msa0474430:three_prime_UTR
TCCAAGGAAAGCTTGATTTC+CGG 0.272781 3_3:+77334153 Msa0474430:CDS
TTCCGGTCTGAGCCATGGCC+TGG 0.273827 3_3:+77334170 Msa0474430:CDS
GTCTGAAATCAAGGATCTTA+TGG 0.315370 3_3:+77339340 Msa0474430:CDS
AAACGAACCACAACACAAAT+TGG 0.317258 3_3:+77340172 Msa0474430:three_prime_UTR
GTGGTTTGAAGGAGTTATTC+AGG 0.319260 3_3:+77339234 Msa0474430:CDS
AGAGATGCTCTTGGAATCAT+AGG 0.326999 3_3:+77339964 Msa0474430:CDS
CAAGCAGCTTGTAAAGAGTT+TGG 0.331886 3_3:+77339636 Msa0474430:CDS
GCAAGTAGGATCTGAACTTA+TGG 0.350637 3_3:+77339316 Msa0474430:CDS
GCACTCCACACGTCTGCTTC+AGG 0.368805 3_3:-77333919 None:intergenic
CTTAATTTCAGAGATGCTCT+TGG 0.398320 3_3:+77339955 Msa0474430:CDS
GATTAATTCGAACATTTGTA+TGG 0.402587 3_3:+77340197 Msa0474430:three_prime_UTR
GCAGAATCAAGAGGTTTATC+TGG 0.405977 3_3:-77334416 None:intergenic
AGAAAGGGAAATGGTGGGAT+TGG 0.421767 3_3:+77339910 Msa0474430:CDS
AATAACGGGACACTTGACTA+TGG 0.425948 3_3:+77339498 Msa0474430:CDS
TCCGGTCTGAGCCATGGCCT+GGG 0.435033 3_3:+77334171 Msa0474430:CDS
TCATTGCAGAGAACTGCTTC+AGG 0.435794 3_3:-77334451 None:intergenic
ACCATTTCCCTTTCTCATCA+TGG 0.441065 3_3:-77339902 None:intergenic
ACCGGAAATCAAGCTTTCCT+TGG 0.441495 3_3:-77334154 None:intergenic
AGGGAAATGGTGGGATTGGA+AGG 0.456027 3_3:+77339914 Msa0474430:CDS
CTGCTTCAGGCGAGATAAAA+CGG 0.458512 3_3:-77334438 None:intergenic
TTCTCATACTTTGACAAAGA+TGG 0.461712 3_3:+77339585 Msa0474430:CDS
GTCGTAGATACTTGAGTCTC+TGG 0.467705 3_3:+77340262 Msa0474430:three_prime_UTR
AGGATGGACAGATAGATTAT+GGG 0.471913 3_3:+77339869 Msa0474430:intron
GAGGTCTTGCACAAGCATTA+TGG 0.472688 3_3:+77333895 Msa0474430:CDS
GGAAGAAATCGGTGGTTTGA+AGG 0.472947 3_3:+77339223 Msa0474430:CDS
GAAGCAGACGTGTGGAGTGC+TGG 0.476693 3_3:+77333922 Msa0474430:CDS
AGAAAACTAAGATTCATTCA+AGG 0.476758 3_3:-77340344 None:intergenic
AGGCAGATATTGATAATAAC+GGG 0.478956 3_3:+77339484 Msa0474430:intron
TAATGCTTGTGCAAGACCTC+TGG 0.481063 3_3:-77333892 None:intergenic
AATAGTCAAGGAAATTGATC+AGG 0.491177 3_3:+77339683 Msa0474430:CDS
ACTTATGGAGTCTGAAATCA+AGG 0.499535 3_3:+77339331 Msa0474430:CDS
AAATTTGTCTGAAGATCCCT+TGG 0.506325 3_3:-77334130 None:intergenic
CTCTTGGAATCATAGGCAAT+GGG 0.508398 3_3:+77339971 Msa0474430:CDS
ATTTGCTGCCATGATGAGAA+AGG 0.511800 3_3:+77339894 Msa0474430:CDS
CTTAAATAAGCTGGAGAGAG+AGG 0.512244 3_3:+77339545 Msa0474430:CDS
CAGGCAGATATTGATAATAA+CGG 0.514142 3_3:+77339483 Msa0474430:intron
GAAATCTTTAGTGATGTTGT+TGG 0.515469 3_3:+77333850 Msa0474430:CDS
TACTGTGCACTTAAATAAGC+TGG 0.515783 3_3:+77339536 Msa0474430:CDS
ATGCTTGATGCTGATAATAG+TGG 0.517517 3_3:+77339257 Msa0474430:CDS
AGGCTTTCTGAGGAAGAAAT+CGG 0.517602 3_3:+77339212 Msa0474430:CDS
TACTTTGACAAAGATGGTAG+TGG 0.526154 3_3:+77339591 Msa0474430:CDS
TAATCCGCCAATTTGTGTTG+TGG 0.527384 3_3:-77340179 None:intergenic
ACATTTGTATGGTGTAGAAA+AGG 0.531508 3_3:+77340208 Msa0474430:three_prime_UTR
TTGATTTCCGGTCTGAGCCA+TGG 0.534567 3_3:+77334165 Msa0474430:CDS
ACATTGGAAGAGTTAAAAGA+AGG 0.535574 3_3:+77339287 Msa0474430:CDS
GAAAACTAAGATTCATTCAA+GGG 0.536138 3_3:-77340343 None:intergenic
AGATAGATACCGGCCCAAAA+CGG 0.536841 3_3:-77333979 None:intergenic
TACTTATTCATAGGTTATTG+CGG 0.539341 3_3:+77339187 Msa0474430:intron
GAAATTAAGTGTGCTTGTCA+TGG 0.542134 3_3:-77339941 None:intergenic
TAATAGTGGAACTATAACAT+TGG 0.547061 3_3:+77339271 Msa0474430:CDS
GCTCTTGGAATCATAGGCAA+TGG 0.547759 3_3:+77339970 Msa0474430:CDS
GAGAGAGGAAAATCTGTTGT+CGG 0.550846 3_3:+77339560 Msa0474430:CDS
GTCAGGTCACCCGTGGATTG+TGG 0.551360 3_3:+77334379 Msa0474430:intron
CTGTCTGAAATCCCAGGCCA+TGG 0.558298 3_3:-77334182 None:intergenic
ATGTTATCATCCACAATCCA+CGG 0.561439 3_3:-77334389 None:intergenic
TAACTTTCAACATTATCAGT+AGG 0.563894 3_3:+77340065 Msa0474430:three_prime_UTR
TTAGTTTGTGCAGTTGCGTG+CGG 0.563945 3_3:+77340380 Msa0474430:three_prime_UTR
TCCCAGGCCATGGCTCAGAC+CGG 0.564681 3_3:-77334172 None:intergenic
TTTGCTGCCATGATGAGAAA+GGG 0.567288 3_3:+77339895 Msa0474430:CDS
CCCATACTATGTTGCGCCAG+AGG 0.570353 3_3:+77333876 Msa0474430:CDS
TTGGCACTGTCTGAAATCCC+AGG 0.570546 3_3:-77334188 None:intergenic
CCTTGACTATTTCATCAATG+TGG 0.578652 3_3:-77339671 None:intergenic
GCCATGATGAGAAAGGGAAA+TGG 0.581983 3_3:+77339901 Msa0474430:CDS
CGAACCACAACACAAATTGG+CGG 0.592693 3_3:+77340175 Msa0474430:three_prime_UTR
TTTCTGTGTCAGGTCACCCG+TGG 0.597199 3_3:+77334372 Msa0474430:intron
ACTTGTACCACACACCATGA+TGG 0.599174 3_3:-77340241 None:intergenic
CCACATTGATGAAATAGTCA+AGG 0.599431 3_3:+77339671 Msa0474430:CDS
CCTCTGGCGCAACATAGTAT+GGG 0.609699 3_3:-77333876 None:intergenic
CTTTCTGAGGAAGAAATCGG+TGG 0.621226 3_3:+77339215 Msa0474430:CDS
ATGATGAGAAAGGGAAATGG+TGG 0.623759 3_3:+77339904 Msa0474430:CDS
AAAGAAGGCTTAAAGCAAGT+AGG 0.625168 3_3:+77339302 Msa0474430:CDS
TATTGCGGAGAGGCTTTCTG+AGG 0.626593 3_3:+77339202 Msa0474430:CDS
TGTTATCATCCACAATCCAC+GGG 0.628849 3_3:-77334388 None:intergenic
GGATGGACAGATAGATTATG+GGG 0.631359 3_3:+77339870 Msa0474430:intron
ATTCATAGGTTATTGCGGAG+AGG 0.635091 3_3:+77339192 Msa0474430:intron
TTTGTACATCTTATTAAGCG+GGG 0.639732 3_3:+77333951 Msa0474430:CDS
AAGGACGAGAATAACCATCA+TGG 0.640312 3_3:+77340227 Msa0474430:three_prime_UTR
TGGGATTTCAGACAGTGCCA+AGG 0.650757 3_3:+77334190 Msa0474430:CDS
GATAAAACGGCAGAATCAAG+AGG 0.657273 3_3:-77334425 None:intergenic
ATGGACCTGAAGCAGACGTG+TGG 0.657874 3_3:+77333914 Msa0474430:CDS
CCACCTACAGAGACTGACCA+AGG 0.659082 3_3:+77334113 Msa0474430:intron
TGATGAGAAAGGGAAATGGT+GGG 0.663749 3_3:+77339905 Msa0474430:CDS
TAGATACCGGCCCAAAACGG+AGG 0.679479 3_3:-77333976 None:intergenic
AGAATAACCATCATGGTGTG+TGG 0.683812 3_3:+77340234 Msa0474430:three_prime_UTR
CACCTACAGAGACTGACCAA+GGG 0.689812 3_3:+77334114 Msa0474430:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGGATATAATTAAATAAAT+GGG - chr3_3:77335031-77335050 None:intergenic 10.0%
!! ATTTATTTAATTATATCCAT+GGG + chr3_3:77335031-77335050 Msa0474430:intron 10.0%
!!! TTTTTATTTAATTATATCCA+TGG + chr3_3:77335076-77335095 Msa0474430:intron 10.0%
!!! TTTTATTTAATTATATCCAT+GGG + chr3_3:77335077-77335096 Msa0474430:intron 10.0%
!! CAATTATCAAATTTATAATT+TGG - chr3_3:77339434-77339453 None:intergenic 10.0%
!!! CAAATTATAAATTTGATAAT+TGG + chr3_3:77339432-77339451 Msa0474430:intron 10.0%
!!! TTTTCCAATTGATTATAAAT+CGG + chr3_3:77333237-77333256 Msa0474430:intron 15.0%
!!! TTAAAATCAAACTTTGTTTT+TGG + chr3_3:77333307-77333326 Msa0474430:intron 15.0%
!! TTTAATGAAAAAAAATGAAC+CGG + chr3_3:77333544-77333563 Msa0474430:intron 15.0%
!! CATGGATATAATTAAATAAA+TGG - chr3_3:77335032-77335051 None:intergenic 15.0%
!! CATTTATTTAATTATATCCA+TGG + chr3_3:77335030-77335049 Msa0474430:intron 15.0%
!! AATCATTATAAAAGCAAAAT+TGG - chr3_3:77335364-77335383 None:intergenic 15.0%
!!! TTATCTTTTTACTTTAGTTT+TGG - chr3_3:77336374-77336393 None:intergenic 15.0%
!! AAAACTAAAGTAAAAAGATA+AGG + chr3_3:77336373-77336392 Msa0474430:intron 15.0%
!!! ATTAGCAATATTATGAATTT+TGG + chr3_3:77338968-77338987 Msa0474430:intron 15.0%
!! TTGTACCTTAAATAATTATT+TGG + chr3_3:77340007-77340026 Msa0474430:three_prime_UTR 15.0%
!! TATCACCAAATAATTATTTA+AGG - chr3_3:77340015-77340034 None:intergenic 15.0%
!!! CTATTAATAAAGACAAATTT+TGG - chr3_3:77340096-77340115 None:intergenic 15.0%
!!! TTCTCAAAACTATTGATTTT+GGG + chr3_3:77332877-77332896 Msa0474430:intron 20.0%
!! CAAAAAATAAAATACAAACC+TGG - chr3_3:77332921-77332940 None:intergenic 20.0%
!! ATTTATTGTTCAGAATGAAA+TGG + chr3_3:77333048-77333067 Msa0474430:intron 20.0%
!!! TTTTTGTTTTTAGAGAGAAA+GGG + chr3_3:77333132-77333151 Msa0474430:intron 20.0%
!!! TATATACTAATTGTTATTGC+AGG + chr3_3:77333364-77333383 Msa0474430:intron 20.0%
!! TTAATGAAAAAAAATGAACC+GGG + chr3_3:77333545-77333564 Msa0474430:intron 20.0%
!!! TTTTCTTTAACAGTATAATG+TGG + chr3_3:77333722-77333741 Msa0474430:intron 20.0%
!!! ATTTTGTACATCTTATTAAG+CGG + chr3_3:77333949-77333968 Msa0474430:CDS 20.0%
!! TATAAATGAAAGATAGATAC+CGG - chr3_3:77333992-77334011 None:intergenic 20.0%
!! ACGAATACTAGAAAAATTAT+CGG + chr3_3:77334316-77334335 Msa0474430:intron 20.0%
!! AATGAATAAGCTTAAAAAGT+TGG + chr3_3:77334469-77334488 Msa0474430:CDS 20.0%
!!! TATGCATTTTAGTACAATTT+AGG + chr3_3:77334614-77334633 Msa0474430:intron 20.0%
!!! TTTTTTGTTGGAATAAAAGA+GGG + chr3_3:77335445-77335464 Msa0474430:intron 20.0%
!!! TTGTTTGATTTTCTTTCTTT+GGG - chr3_3:77335478-77335497 None:intergenic 20.0%
!! TTAATTCAAGATATTCCATT+AGG - chr3_3:77338011-77338030 None:intergenic 20.0%
!! TCTTATGTATACTTATTCAT+AGG + chr3_3:77339178-77339197 Msa0474430:intron 20.0%
!!! ATATAGTTCGTTATTGTTTT+AGG + chr3_3:77339375-77339394 Msa0474430:intron 20.0%
!! TTAAGGTACAATAACTTAAT+TGG - chr3_3:77339998-77340017 None:intergenic 20.0%
!!! TTATTTGGTGATACAAATTT+TGG + chr3_3:77340022-77340041 Msa0474430:three_prime_UTR 20.0%
!!! TCATTCTAAAATGTTTTCTT+TGG + chr3_3:77340121-77340140 Msa0474430:three_prime_UTR 20.0%
!! GAAGATTTTCAGTTACATAA+GGG - chr3_3:77332428-77332447 None:intergenic 25.0%
! ACAAAAAATTCTCAGGTTTA+AGG - chr3_3:77332833-77332852 None:intergenic 25.0%
! GAATCAAACAAAAAATTCTC+AGG - chr3_3:77332840-77332859 None:intergenic 25.0%
!!! CTTCTCAAAACTATTGATTT+TGG + chr3_3:77332876-77332895 Msa0474430:intron 25.0%
!! GTTTGATAATTTATTGCATC+CGG + chr3_3:77332987-77333006 Msa0474430:intron 25.0%
!! TTTGATAATTTATTGCATCC+GGG + chr3_3:77332988-77333007 Msa0474430:intron 25.0%
!!! GATTTCAATCTTGTTGATTT+TGG + chr3_3:77333096-77333115 Msa0474430:intron 25.0%
!!! GTTTTTGTTTTTAGAGAGAA+AGG + chr3_3:77333131-77333150 Msa0474430:intron 25.0%
!!! CAGGAAATAGATTGATTTTA+GGG + chr3_3:77333262-77333281 Msa0474430:intron 25.0%
!! TAATTGTTATTGCAGGTTAA+TGG + chr3_3:77333371-77333390 Msa0474430:intron 25.0%
! CTATCAAACATAGTGTATAA+TGG - chr3_3:77333432-77333451 None:intergenic 25.0%
! GTGTTCAAATTAGGAAAAAA+TGG + chr3_3:77333499-77333518 Msa0474430:intron 25.0%
!! TTCATTAAATATCGCCTTTT+TGG - chr3_3:77333533-77333552 None:intergenic 25.0%
!! TGTACGAAGAAATAAACTTT+TGG + chr3_3:77333617-77333636 Msa0474430:intron 25.0%
!! TTTTGTACATCTTATTAAGC+GGG + chr3_3:77333950-77333969 Msa0474430:CDS 25.0%
! TAATTCGAAAAATGCTTGAT+AGG + chr3_3:77334216-77334235 Msa0474430:CDS 25.0%
! TACTAGAAAAATTATCGGAA+TGG + chr3_3:77334321-77334340 Msa0474430:intron 25.0%
! ACTAGAAAAATTATCGGAAT+GGG + chr3_3:77334322-77334341 Msa0474430:intron 25.0%
!!! GCATTTAGATGATTTTTTCT+TGG + chr3_3:77334789-77334808 Msa0474430:intron 25.0%
!!! TTTTTGTGATCTAAAGCATA+AGG - chr3_3:77334897-77334916 None:intergenic 25.0%
! TTTCATTACAAAGTGAGTAT+AGG - chr3_3:77334930-77334949 None:intergenic 25.0%
! CACTTCAACTTCATAATATT+TGG + chr3_3:77335000-77335019 Msa0474430:intron 25.0%
! AAATATGACTAGACTTTGAA+TGG + chr3_3:77335132-77335151 Msa0474430:intron 25.0%
! TTATTCCAACAAAAAAGGAT+GGG - chr3_3:77335441-77335460 None:intergenic 25.0%
! TTTATTCCAACAAAAAAGGA+TGG - chr3_3:77335442-77335461 None:intergenic 25.0%
!! CTCTTTTATTCCAACAAAAA+AGG - chr3_3:77335446-77335465 None:intergenic 25.0%
!!! CTTTTTTGTTGGAATAAAAG+AGG + chr3_3:77335444-77335463 Msa0474430:intron 25.0%
!!! GTTGTTTGATTTTCTTTCTT+TGG - chr3_3:77335479-77335498 None:intergenic 25.0%
!! TTGTTGTTGTAACACTTAAA+AGG - chr3_3:77335509-77335528 None:intergenic 25.0%
! AACCATTAGAAAAGATTTAG+AGG - chr3_3:77335630-77335649 None:intergenic 25.0%
!! GTTTCTCTAATAGTTTTCTT+AGG + chr3_3:77335647-77335666 Msa0474430:intron 25.0%
!!! TAGAAAAGTTGGTAGAAAAT+AGG - chr3_3:77335772-77335791 None:intergenic 25.0%
! AAGTAAAAAGATAAGGACTT+AGG + chr3_3:77336380-77336399 Msa0474430:intron 25.0%
! AGTAAAAAGATAAGGACTTA+GGG + chr3_3:77336381-77336400 Msa0474430:intron 25.0%
! ATTCCAATCTATAAGAACAA+GGG - chr3_3:77336817-77336836 None:intergenic 25.0%
! AATTCCAATCTATAAGAACA+AGG - chr3_3:77336818-77336837 None:intergenic 25.0%
! GTTCTTATAGATTGGAATTA+AGG + chr3_3:77336819-77336838 Msa0474430:intron 25.0%
! GAAACTATAACTATTATCGT+CGG - chr3_3:77337026-77337045 None:intergenic 25.0%
! GACGATAATAGTTATAGTTT+CGG + chr3_3:77337025-77337044 Msa0474430:intron 25.0%
! CTTATATTTATCCCAAGTTT+CGG + chr3_3:77337344-77337363 Msa0474430:intron 25.0%
!! TTCCATCTTAGATTTTTCAT+CGG - chr3_3:77337877-77337896 None:intergenic 25.0%
!! TTAGGAGAAAAGATTTTTCT+AGG - chr3_3:77337993-77338012 None:intergenic 25.0%
!! AGAAAAATCTTTTCTCCTAA+TGG + chr3_3:77337993-77338012 Msa0474430:intron 25.0%
!! ACACCTTAAAGTAAAGTTTT+GGG - chr3_3:77338048-77338067 None:intergenic 25.0%
!! AACACCTTAAAGTAAAGTTT+TGG - chr3_3:77338049-77338068 None:intergenic 25.0%
! AAGATATTGTGGATGTTAAA+AGG - chr3_3:77338163-77338182 None:intergenic 25.0%
! ATGTAGTGAAAAATAAGCAA+GGG - chr3_3:77338460-77338479 None:intergenic 25.0%
!! TTACATTGTGTTTTATGCAT+TGG + chr3_3:77338722-77338741 Msa0474430:intron 25.0%
! TACTTATTCATAGGTTATTG+CGG + chr3_3:77339187-77339206 Msa0474430:intron 25.0%
!! TAATAGTGGAACTATAACAT+TGG + chr3_3:77339271-77339290 Msa0474430:CDS 25.0%
! TCACATGCAAGATTAATATA+AGG - chr3_3:77339463-77339482 None:intergenic 25.0%
!! TTACACTGTAATGATAATGT+TGG - chr3_3:77339801-77339820 None:intergenic 25.0%
! TAACTTTCAACATTATCAGT+AGG + chr3_3:77340065-77340084 Msa0474430:three_prime_UTR 25.0%
!!! AATAAAGACAAATTTTGGTC+AGG - chr3_3:77340091-77340110 None:intergenic 25.0%
! GATTAATTCGAACATTTGTA+TGG + chr3_3:77340197-77340216 Msa0474430:three_prime_UTR 25.0%
!! TTTTCAATAAACATCAGTCA+GGG - chr3_3:77340301-77340320 None:intergenic 25.0%
!!! TTTTTCAATAAACATCAGTC+AGG - chr3_3:77340302-77340321 None:intergenic 25.0%
!!! TGAAAAATATTTGTTGTGAG+AGG + chr3_3:77340315-77340334 Msa0474430:three_prime_UTR 25.0%
! GAAAACTAAGATTCATTCAA+GGG - chr3_3:77340346-77340365 None:intergenic 25.0%
! AGAAAACTAAGATTCATTCA+AGG - chr3_3:77340347-77340366 None:intergenic 25.0%
! CGAAGATTTTCAGTTACATA+AGG - chr3_3:77332429-77332448 None:intergenic 30.0%
! AAGAGGATTATGATGATGTT+TGG + chr3_3:77332574-77332593 Msa0474430:intron 30.0%
! CATTTGGATTTTCAGACAAA+TGG - chr3_3:77332620-77332639 None:intergenic 30.0%
! GTTTTCTGTTCATTTGGTTA+TGG + chr3_3:77332671-77332690 Msa0474430:intron 30.0%
GTTGATTAGAACTATTGTTG+AGG + chr3_3:77332767-77332786 Msa0474430:intron 30.0%
! GTGATTTGTGAAATGATGAA+TGG + chr3_3:77332965-77332984 Msa0474430:intron 30.0%
! TGGCTTAGTTGATTTATTTG+TGG + chr3_3:77333068-77333087 Msa0474430:intron 30.0%
GTACTAAAGAATCAAGCAAA+TGG - chr3_3:77333199-77333218 None:intergenic 30.0%
TTGCTTGATTCTTTAGTACT+TGG + chr3_3:77333200-77333219 Msa0474430:intron 30.0%
! TGGACCGATTTATAATCAAT+TGG - chr3_3:77333244-77333263 None:intergenic 30.0%
AATTGATTATAAATCGGTCC+AGG + chr3_3:77333243-77333262 Msa0474430:intron 30.0%
CCTAAAATCAATCTATTTCC+TGG - chr3_3:77333264-77333283 None:intergenic 30.0%
!! CCAGGAAATAGATTGATTTT+AGG + chr3_3:77333261-77333280 Msa0474430:intron 30.0%
!!! CTTTGTTTTTGGTTGTGTAT+TGG + chr3_3:77333318-77333337 Msa0474430:intron 30.0%
GTTAATGGCATGGTTTATTA+TGG + chr3_3:77333386-77333405 Msa0474430:intron 30.0%
TTCCTAATTGAACAAGAACA+TGG + chr3_3:77333456-77333475 Msa0474430:intron 30.0%
TCCTAATTGAACAAGAACAT+GGG + chr3_3:77333457-77333476 Msa0474430:intron 30.0%
GCAATCATTTCTGATTGATA+TGG - chr3_3:77333791-77333810 None:intergenic 30.0%
! AACAAACTGATGTGTTTTTC+AGG + chr3_3:77333826-77333845 Msa0474430:intron 30.0%
GAAATCTTTAGTGATGTTGT+TGG + chr3_3:77333850-77333869 Msa0474430:CDS 30.0%
TTTGTACATCTTATTAAGCG+GGG + chr3_3:77333951-77333970 Msa0474430:CDS 30.0%
ATACATCAAATTATCAGCTG+TGG + chr3_3:77334009-77334028 Msa0474430:intron 30.0%
ACAGTATTAGCAATGAGAAA+AGG - chr3_3:77334080-77334099 None:intergenic 30.0%
! ATCTTCAGACAAATTTTCCA+AGG + chr3_3:77334137-77334156 Msa0474430:CDS 30.0%
!! CATTTTTCGAATTAGATCCT+TGG - chr3_3:77334210-77334229 None:intergenic 30.0%
!!! GAGCTGTAAATCTTGTTTTT+GGG - chr3_3:77334244-77334263 None:intergenic 30.0%
!!! TGAGCTGTAAATCTTGTTTT+TGG - chr3_3:77334245-77334264 None:intergenic 30.0%
TGATTAGGCTTGATGAAATT+AGG + chr3_3:77334521-77334540 Msa0474430:intron 30.0%
! AATTTTGTGTACATTCTCGT+TGG + chr3_3:77334686-77334705 Msa0474430:intron 30.0%
TAAAGGCTTCTTCATTCTAA+AGG + chr3_3:77334720-77334739 Msa0474430:intron 30.0%
ATTACAAAGTGAGTATAGGT+TGG - chr3_3:77334926-77334945 None:intergenic 30.0%
TTATGAAGTTGAAGTGTAAC+CGG - chr3_3:77334996-77335015 None:intergenic 30.0%
AATGCAAAGTATAATACCTG+AGG - chr3_3:77335244-77335263 None:intergenic 30.0%
CGAAATCTATATCATTGAAC+AGG + chr3_3:77335271-77335290 Msa0474430:intron 30.0%
AAGTTCATCAAATTGATCAC+AGG - chr3_3:77335329-77335348 None:intergenic 30.0%
TCTTTGATAGAACATTATGG+CGG - chr3_3:77335583-77335602 None:intergenic 30.0%
TGGTCTTTGATAGAACATTA+TGG - chr3_3:77335586-77335605 None:intergenic 30.0%
GTTCTATCAAAGACCATATT+TGG + chr3_3:77335590-77335609 Msa0474430:intron 30.0%
! GACCTCTAAATCTTTTCTAA+TGG + chr3_3:77335625-77335644 Msa0474430:intron 30.0%
! TCTACCAACTTTTCTACTAT+AGG + chr3_3:77335776-77335795 Msa0474430:intron 30.0%
TTACACGGTTTAGATATCTT+GGG - chr3_3:77336108-77336127 None:intergenic 30.0%
ATATCTAAACCGTGTAACTT+GGG + chr3_3:77336111-77336130 Msa0474430:intron 30.0%
TGGAATGTAACTTCAGTAAA+AGG - chr3_3:77336183-77336202 None:intergenic 30.0%
TAGAAACAAGACGGAATATA+TGG - chr3_3:77336203-77336222 None:intergenic 30.0%
!!! TTTAGTTTTGGATGTACTGA+CGG - chr3_3:77336362-77336381 None:intergenic 30.0%
TATTGTTATGGGAAAATCTC+CGG + chr3_3:77336423-77336442 Msa0474430:intron 30.0%
!!! AGTTTTCATTGATTTGGAGA+AGG - chr3_3:77336581-77336600 None:intergenic 30.0%
!! GCACTTAGTTTTCATTGATT+TGG - chr3_3:77336587-77336606 None:intergenic 30.0%
TTCCAATCTATAAGAACAAG+GGG - chr3_3:77336816-77336835 None:intergenic 30.0%
! AACTTTTCAACGAGATTATG+AGG - chr3_3:77336879-77336898 None:intergenic 30.0%
ATCCTTCGTTAAATAAGTTG+TGG + chr3_3:77337094-77337113 Msa0474430:intron 30.0%
TTCCACAACTTATTTAACGA+AGG - chr3_3:77337099-77337118 None:intergenic 30.0%
AGAGAGATATTAAGGATAGA+TGG - chr3_3:77337131-77337150 None:intergenic 30.0%
AAGTGTATTAAGGATGAAGA+GGG - chr3_3:77337171-77337190 None:intergenic 30.0%
GAAGGATTATACCAATCTTT+AGG - chr3_3:77337270-77337289 None:intergenic 30.0%
ATATAAGATAGCTAGGAAAG+AGG - chr3_3:77337331-77337350 None:intergenic 30.0%
GGGATAAATATAAGATAGCT+AGG - chr3_3:77337338-77337357 None:intergenic 30.0%
!!! AGAGAGATTGTTTTAGAGAT+TGG - chr3_3:77337386-77337405 None:intergenic 30.0%
TTCCAACACAAGATATTAGA+GGG - chr3_3:77337573-77337592 None:intergenic 30.0%
ATTCCAACACAAGATATTAG+AGG - chr3_3:77337574-77337593 None:intergenic 30.0%
ATTTAAAGGGTGACAAACAA+AGG - chr3_3:77337599-77337618 None:intergenic 30.0%
TTTAGACTGTAAAGTCATAC+CGG - chr3_3:77337727-77337746 None:intergenic 30.0%
! AGATCGATTTCTTTCTCATT+AGG - chr3_3:77337770-77337789 None:intergenic 30.0%
! CAATAGCAAATACGTGTTTT+AGG - chr3_3:77337842-77337861 None:intergenic 30.0%
!! AGAAAAGATTTTTCTAGGAG+GGG - chr3_3:77337988-77338007 None:intergenic 30.0%
!! GAGAAAAGATTTTTCTAGGA+GGG - chr3_3:77337989-77338008 None:intergenic 30.0%
ATAAGCGCTAATTACGTTAA+AGG + chr3_3:77338091-77338110 Msa0474430:intron 30.0%
ATGTTAAAAGGATAGGAGAT+CGG - chr3_3:77338151-77338170 None:intergenic 30.0%
ATTGTGGATGTTAAAAGGAT+AGG - chr3_3:77338158-77338177 None:intergenic 30.0%
ATAGTTCAGGATTTAAGCTT+TGG - chr3_3:77338247-77338266 None:intergenic 30.0%
TTGGAATATAGGTACTCTTA+CGG - chr3_3:77338369-77338388 None:intergenic 30.0%
GATGTAGTGAAAAATAAGCA+AGG - chr3_3:77338461-77338480 None:intergenic 30.0%
CATTCACACTATTTCGTATT+TGG + chr3_3:77338561-77338580 Msa0474430:intron 30.0%
!!! AATCCTTTTAAGTGTTGAAG+TGG + chr3_3:77338683-77338702 Msa0474430:intron 30.0%
AAACACAATGTAAGAATGTC+AGG - chr3_3:77338715-77338734 None:intergenic 30.0%
!! ACGTCTTAGTTTGTGAATAT+TGG + chr3_3:77339032-77339051 Msa0474430:intron 30.0%
ACATTGGAAGAGTTAAAAGA+AGG + chr3_3:77339287-77339306 Msa0474430:CDS 30.0%
TGCAAGATTAATATAAGGCT+TGG - chr3_3:77339458-77339477 None:intergenic 30.0%
ATATTAATCTTGCATGTGAC+AGG + chr3_3:77339464-77339483 Msa0474430:intron 30.0%
! CAGGCAGATATTGATAATAA+CGG + chr3_3:77339483-77339502 Msa0474430:intron 30.0%
! AGGCAGATATTGATAATAAC+GGG + chr3_3:77339484-77339503 Msa0474430:intron 30.0%
TTCTCATACTTTGACAAAGA+TGG + chr3_3:77339585-77339604 Msa0474430:CDS 30.0%
AATAGTCAAGGAAATTGATC+AGG + chr3_3:77339683-77339702 Msa0474430:CDS 30.0%
! TGATGAAAATTTTGTGTTGC+AGG + chr3_3:77339849-77339868 Msa0474430:intron 30.0%
! CGTTTCATGACAAACATTTT+GGG - chr3_3:77340157-77340176 None:intergenic 30.0%
! TCGTTTCATGACAAACATTT+TGG - chr3_3:77340158-77340177 None:intergenic 30.0%
ACATTTGTATGGTGTAGAAA+AGG + chr3_3:77340208-77340227 Msa0474430:three_prime_UTR 30.0%
!! AATGAATCTTAGTTTTCTCG+AGG + chr3_3:77340349-77340368 Msa0474430:three_prime_UTR 30.0%
!! ATGAATCTTAGTTTTCTCGA+GGG + chr3_3:77340350-77340369 Msa0474430:three_prime_UTR 30.0%
TTACACCTTAGGTAGAAAAC+TGG + chr3_3:77332455-77332474 Msa0474430:intron 35.0%
TACACCTTAGGTAGAAAACT+GGG + chr3_3:77332456-77332475 Msa0474430:intron 35.0%
!! TGAGATTGATTTGCAAGCAT+AGG - chr3_3:77332535-77332554 None:intergenic 35.0%
! GAAGAAGCTTTTATGCAAAG+AGG + chr3_3:77332557-77332576 Msa0474430:intron 35.0%
CTGAAAATCCAAATGTTGTG+AGG + chr3_3:77332625-77332644 Msa0474430:intron 35.0%
AAGGTGGGGAATTATTTGAT+AGG + chr3_3:77332703-77332722 Msa0474430:intron 35.0%
ATTTGATAGGATTGTGCAGA+AGG + chr3_3:77332716-77332735 Msa0474430:intron 35.0%
TTTGATAGGATTGTGCAGAA+GGG + chr3_3:77332717-77332736 Msa0474430:intron 35.0%
!!! TTGTCTGTTTTTTACAAGCC+AGG + chr3_3:77332900-77332919 Msa0474430:intron 35.0%
!!! TCTTGTTGATTTTGGCTGTA+TGG + chr3_3:77333104-77333123 Msa0474430:intron 35.0%
TTAGAGAGAAAGGGATAAGA+AGG + chr3_3:77333141-77333160 Msa0474430:intron 35.0%
TAGAGAGAAAGGGATAAGAA+GGG + chr3_3:77333142-77333161 Msa0474430:intron 35.0%
TGATTCTTTAGTACTTGGAG+AGG + chr3_3:77333205-77333224 Msa0474430:intron 35.0%
AATGGTGTGTATACTCTTTG+TGG - chr3_3:77333414-77333433 None:intergenic 35.0%
TCCCATGTTCTTGTTCAATT+AGG - chr3_3:77333461-77333480 None:intergenic 35.0%
AAATGGAGATGAAGCCAAAA+AGG + chr3_3:77333516-77333535 Msa0474430:intron 35.0%
!!! ACTTTTGGTGTTCTAAATGC+TGG + chr3_3:77333632-77333651 Msa0474430:intron 35.0%
ATGCATTCCTGAGTATAATG+TGG + chr3_3:77333664-77333683 Msa0474430:intron 35.0%
GAATGTTCCACATTATACTC+AGG - chr3_3:77333674-77333693 None:intergenic 35.0%
AAGGATGAAGGTGAAGAAAA+CGG - chr3_3:77334061-77334080 None:intergenic 35.0%
TAGCAATGAGAAAAGGATGA+AGG - chr3_3:77334073-77334092 None:intergenic 35.0%
AAATTTGTCTGAAGATCCCT+TGG - chr3_3:77334133-77334152 None:intergenic 35.0%
!! TTTTAGACTTACAGAGCACT+TGG - chr3_3:77334268-77334287 None:intergenic 35.0%
TGAAAGCTATGGAACTTAAG+TGG + chr3_3:77334347-77334366 Msa0474430:intron 35.0%
! TTAAGTGGTTTTTCTGTGTC+AGG + chr3_3:77334362-77334381 Msa0474430:intron 35.0%
ATGTTATCATCCACAATCCA+CGG - chr3_3:77334392-77334411 None:intergenic 35.0%
TTCTGCAAACCTTCTTGATT+AGG + chr3_3:77334506-77334525 Msa0474430:intron 35.0%
TTCATCAAGCCTAATCAAGA+AGG - chr3_3:77334518-77334537 None:intergenic 35.0%
! CTTCATTCTAAAGGTTTGCA+TGG + chr3_3:77334729-77334748 Msa0474430:intron 35.0%
!!! TGTTTTAACAACAGTGATGC+TGG + chr3_3:77334765-77334784 Msa0474430:intron 35.0%
! GTGCATATGTTTTTCATGCA+TGG + chr3_3:77334967-77334986 Msa0474430:intron 35.0%
!! AGGTTTTGCCTTGATGATAA+GGG - chr3_3:77335224-77335243 None:intergenic 35.0%
AAAAAAGGATGGGATGCATA+AGG - chr3_3:77335431-77335450 None:intergenic 35.0%
! CAATGAGTTGGATCCAAATA+TGG - chr3_3:77335606-77335625 None:intergenic 35.0%
AGATTTAGAGGTCAATGAGT+TGG - chr3_3:77335618-77335637 None:intergenic 35.0%
AAGAAGAGTAGATCAAATGG+AGG - chr3_3:77335702-77335721 None:intergenic 35.0%
GGTAAGAAGAGTAGATCAAA+TGG - chr3_3:77335705-77335724 None:intergenic 35.0%
TTGATCTACTCTTCTTACCA+CGG + chr3_3:77335706-77335725 Msa0474430:intron 35.0%
GAAAATAGGCTTAGATGGTT+TGG - chr3_3:77335758-77335777 None:intergenic 35.0%
TGGTAGAAAATAGGCTTAGA+TGG - chr3_3:77335763-77335782 None:intergenic 35.0%
AGCACCTATAGTAGAAAAGT+TGG - chr3_3:77335783-77335802 None:intergenic 35.0%
AGACTAGACATGATAGGATT+AGG - chr3_3:77335835-77335854 None:intergenic 35.0%
AGCTGAAAGGAAAGTTCTAT+CGG - chr3_3:77335970-77335989 None:intergenic 35.0%
AACTTTCCTTTCAGCTTAAG+TGG + chr3_3:77335974-77335993 Msa0474430:intron 35.0%
! AAAGTACCACTTAAGCTGAA+AGG - chr3_3:77335983-77336002 None:intergenic 35.0%
TACATCATCGTATTCAAGCT+GGG - chr3_3:77336048-77336067 None:intergenic 35.0%
!! TTCTCCGTCATTTTGTACTA+TGG + chr3_3:77336081-77336100 Msa0474430:intron 35.0%
GTTACACGGTTTAGATATCT+TGG - chr3_3:77336109-77336128 None:intergenic 35.0%
GATATCTAAACCGTGTAACT+TGG + chr3_3:77336110-77336129 Msa0474430:intron 35.0%
TATCTAAACCGTGTAACTTG+GGG + chr3_3:77336112-77336131 Msa0474430:intron 35.0%
ATATCATACCCCAAGTTACA+CGG - chr3_3:77336123-77336142 None:intergenic 35.0%
ACTTCAGTAAAAGGAGAAGT+GGG - chr3_3:77336174-77336193 None:intergenic 35.0%
AACTTCAGTAAAAGGAGAAG+TGG - chr3_3:77336175-77336194 None:intergenic 35.0%
! TCTGCAAAAAGCATACATCT+CGG + chr3_3:77336316-77336335 Msa0474430:intron 35.0%
! GGAGATTTTCCCATAACAAT+AGG - chr3_3:77336424-77336443 None:intergenic 35.0%
!! ATCCTGGATAGCTCTAATAT+AGG + chr3_3:77336492-77336511 Msa0474430:intron 35.0%
!!! ACCAATTTGGTTTTATGCCT+GGG - chr3_3:77336681-77336700 None:intergenic 35.0%
!!! AACCAATTTGGTTTTATGCC+TGG - chr3_3:77336682-77336701 None:intergenic 35.0%
AAGAAAAGAGACTCACGTTA+CGG - chr3_3:77336707-77336726 None:intergenic 35.0%
TACCATGAAGTTATGGGAAA+GGG - chr3_3:77336746-77336765 None:intergenic 35.0%
ATACCATGAAGTTATGGGAA+AGG - chr3_3:77336747-77336766 None:intergenic 35.0%
GAGTCATACCATGAAGTTAT+GGG - chr3_3:77336752-77336771 None:intergenic 35.0%
TGAGTCATACCATGAAGTTA+TGG - chr3_3:77336753-77336772 None:intergenic 35.0%
ACAAGATTGCGCGAATTATA+GGG - chr3_3:77336788-77336807 None:intergenic 35.0%
TACAAGATTGCGCGAATTAT+AGG - chr3_3:77336789-77336808 None:intergenic 35.0%
TCCAATCTATAAGAACAAGG+GGG - chr3_3:77336815-77336834 None:intergenic 35.0%
TAACTATTATCGTCGGATTC+AGG - chr3_3:77337019-77337038 None:intergenic 35.0%
GAAGTGTATTAAGGATGAAG+AGG - chr3_3:77337172-77337191 None:intergenic 35.0%
CATCCTTAATACACTTCACT+TGG + chr3_3:77337175-77337194 Msa0474430:intron 35.0%
TCTATATACAAGCTTGCGAA+GGG - chr3_3:77337228-77337247 None:intergenic 35.0%
ATCTATATACAAGCTTGCGA+AGG - chr3_3:77337229-77337248 None:intergenic 35.0%
ATACCAATCTTTAGGTACCA+AGG - chr3_3:77337262-77337281 None:intergenic 35.0%
GTGTAAAAATGCCGAAACTT+GGG - chr3_3:77337358-77337377 None:intergenic 35.0%
AGTGTAAAAATGCCGAAACT+TGG - chr3_3:77337359-77337378 None:intergenic 35.0%
ACAGTGTTCAGAGTAAAGTT+CGG - chr3_3:77337413-77337432 None:intergenic 35.0%
ATCAAGTGGTGGCATTTAAA+GGG - chr3_3:77337612-77337631 None:intergenic 35.0%
AATCAAGTGGTGGCATTTAA+AGG - chr3_3:77337613-77337632 None:intergenic 35.0%
!! AGTAATGGTGATGGATGTAA+GGG - chr3_3:77337679-77337698 None:intergenic 35.0%
CATCACCATTACTCTATGTT+GGG + chr3_3:77337686-77337705 Msa0474430:intron 35.0%
AACTACCCAACATAGAGTAA+TGG - chr3_3:77337694-77337713 None:intergenic 35.0%
TTAGACTGTAAAGTCATACC+GGG - chr3_3:77337726-77337745 None:intergenic 35.0%
TTCTCATTAGGAAAACAGAC+AGG - chr3_3:77337758-77337777 None:intergenic 35.0%
ATCTCATCACTTACAAGAGT+GGG - chr3_3:77337806-77337825 None:intergenic 35.0%
!!! TACGTGTTTTAGGAAAAGAG+AGG - chr3_3:77337832-77337851 None:intergenic 35.0%
AGCCGATGAAAAATCTAAGA+TGG + chr3_3:77337872-77337891 Msa0474430:intron 35.0%
! GGAGAAAAGATTTTTCTAGG+AGG - chr3_3:77337990-77338009 None:intergenic 35.0%
!!! CCTTAAAGTAAAGTTTTGGG+AGG - chr3_3:77338045-77338064 None:intergenic 35.0%
CCTCCCAAAACTTTACTTTA+AGG + chr3_3:77338042-77338061 Msa0474430:intron 35.0%
TTGTTCCACTACACACTTTA+AGG + chr3_3:77338118-77338137 Msa0474430:intron 35.0%
! TATAGCCTTAAAGTGTGTAG+TGG - chr3_3:77338126-77338145 None:intergenic 35.0%
! AGGATTTAAGCTTTGGTACA+CGG - chr3_3:77338240-77338259 None:intergenic 35.0%
AAGTAGTAGACACTATGACT+AGG - chr3_3:77338334-77338353 None:intergenic 35.0%
TACTCTTACGGGTAAATCTA+TGG - chr3_3:77338357-77338376 None:intergenic 35.0%
TGGAATATAGGTACTCTTAC+GGG - chr3_3:77338368-77338387 None:intergenic 35.0%
!!! CGTTTTGGAACTTGGAATAT+AGG - chr3_3:77338380-77338399 None:intergenic 35.0%
!! GCTTATTTTTCACTACATCC+AGG + chr3_3:77338462-77338481 Msa0474430:intron 35.0%
! TATTTTTCACTACATCCAGG+CGG + chr3_3:77338465-77338484 Msa0474430:intron 35.0%
TACGAAATAGTGTGAATGCT+AGG - chr3_3:77338559-77338578 None:intergenic 35.0%
TTTGTCGAATCTCTATGACA+TGG - chr3_3:77338588-77338607 None:intergenic 35.0%
! GATTCGACAAAGTTTTACGT+TGG + chr3_3:77338597-77338616 Msa0474430:intron 35.0%
TAAAAGGATTAATCCTGCCA+AGG - chr3_3:77338673-77338692 None:intergenic 35.0%
TGTCCACTTCAACACTTAAA+AGG - chr3_3:77338689-77338708 None:intergenic 35.0%
! TGCCTTCTCTTCTGATTTTA+AGG - chr3_3:77338748-77338767 None:intergenic 35.0%
TTATCACAGCAAATCAGCAA+TGG - chr3_3:77338926-77338945 None:intergenic 35.0%
TCCTGACTGAGAAGTTAAAA+GGG + chr3_3:77339122-77339141 Msa0474430:intron 35.0%
ATGCTTGATGCTGATAATAG+TGG + chr3_3:77339257-77339276 Msa0474430:CDS 35.0%
AAAGAAGGCTTAAAGCAAGT+AGG + chr3_3:77339302-77339321 Msa0474430:CDS 35.0%
! ACTTATGGAGTCTGAAATCA+AGG + chr3_3:77339331-77339350 Msa0474430:CDS 35.0%
! GTCTGAAATCAAGGATCTTA+TGG + chr3_3:77339340-77339359 Msa0474430:CDS 35.0%
AGCATCACAAGTAAAGAAAC+TGG - chr3_3:77339408-77339427 None:intergenic 35.0%
TACTGTGCACTTAAATAAGC+TGG + chr3_3:77339536-77339555 Msa0474430:CDS 35.0%
TACTTTGACAAAGATGGTAG+TGG + chr3_3:77339591-77339610 Msa0474430:CDS 35.0%
CCTTGACTATTTCATCAATG+TGG - chr3_3:77339674-77339693 None:intergenic 35.0%
CCACATTGATGAAATAGTCA+AGG + chr3_3:77339671-77339690 Msa0474430:CDS 35.0%
! GAAAATTTTGTGTTGCAGGA+TGG + chr3_3:77339853-77339872 Msa0474430:intron 35.0%
AGGATGGACAGATAGATTAT+GGG + chr3_3:77339869-77339888 Msa0474430:intron 35.0%
GAAATTAAGTGTGCTTGTCA+TGG - chr3_3:77339944-77339963 None:intergenic 35.0%
CTTAATTTCAGAGATGCTCT+TGG + chr3_3:77339955-77339974 Msa0474430:CDS 35.0%
!! GGTGATACAAATTTTGGAAG+TGG + chr3_3:77340028-77340047 Msa0474430:three_prime_UTR 35.0%
TGGAAGTGGCAAAAAAACTT+TGG + chr3_3:77340042-77340061 Msa0474430:three_prime_UTR 35.0%
AAACGAACCACAACACAAAT+TGG + chr3_3:77340172-77340191 Msa0474430:three_prime_UTR 35.0%
!! TGAATCTTAGTTTTCTCGAG+GGG + chr3_3:77340351-77340370 Msa0474430:three_prime_UTR 35.0%
!! GTTGTACTGTGTTTGGTGTT+TGG - chr3_3:77332344-77332363 None:intergenic 40.0%
CTTCAACGTTGTACTGTGTT+TGG - chr3_3:77332351-77332370 None:intergenic 40.0%
CTTCGTGAAGTTTACACCTT+AGG + chr3_3:77332444-77332463 Msa0474430:intron 40.0%
! TTGACCCAGTTTTCTACCTA+AGG - chr3_3:77332463-77332482 None:intergenic 40.0%
TTAGGTAGAAAACTGGGTCA+AGG + chr3_3:77332462-77332481 Msa0474430:intron 40.0%
AAACTGGGTCAAGGTCAATT+CGG + chr3_3:77332471-77332490 Msa0474430:intron 40.0%
! GGATGCGTTTTCTGTTCATT+TGG + chr3_3:77332665-77332684 Msa0474430:intron 40.0%
! TTGGTTATGGAGCTTTGTGA+AGG + chr3_3:77332684-77332703 Msa0474430:intron 40.0%
! TTATGGAGCTTTGTGAAGGT+GGG + chr3_3:77332688-77332707 Msa0474430:intron 40.0%
GTTGAAGCTTGTCATTCTCT+TGG + chr3_3:77332792-77332811 Msa0474430:intron 40.0%
!! TGCGGTGGATTCTTTTATGA+CGG + chr3_3:77333023-77333042 Msa0474430:intron 40.0%
AGAGAGAAAGGGATAAGAAG+GGG + chr3_3:77333143-77333162 Msa0474430:intron 40.0%
TTTAGGGAGCAATGTGATCT+AGG + chr3_3:77333278-77333297 Msa0474430:intron 40.0%
TTAGGGAGCAATGTGATCTA+GGG + chr3_3:77333279-77333298 Msa0474430:intron 40.0%
GTTATTGCAGGTTAATGGCA+TGG + chr3_3:77333376-77333395 Msa0474430:intron 40.0%
GTGAATGAAATGAACGACAC+TGG - chr3_3:77333766-77333785 None:intergenic 40.0%
AAATTATCAGCTGTGGATGC+AGG + chr3_3:77334016-77334035 Msa0474430:intron 40.0%
TCCAAGGAAAGCTTGATTTC+CGG + chr3_3:77334153-77334172 Msa0474430:CDS 40.0%
TGTTATCATCCACAATCCAC+GGG - chr3_3:77334391-77334410 None:intergenic 40.0%
GCAGAATCAAGAGGTTTATC+TGG - chr3_3:77334419-77334438 None:intergenic 40.0%
GATAAAACGGCAGAATCAAG+AGG - chr3_3:77334428-77334447 None:intergenic 40.0%
TGCAGCAATTTCAGACAACT+AGG - chr3_3:77334831-77334850 None:intergenic 40.0%
! TAGTTGTCTGAAATTGCTGC+AGG + chr3_3:77334830-77334849 Msa0474430:intron 40.0%
! AGTTGTCTGAAATTGCTGCA+GGG + chr3_3:77334831-77334850 Msa0474430:intron 40.0%
AATTGCTGCAGGGAATATCT+TGG + chr3_3:77334841-77334860 Msa0474430:intron 40.0%
! TGTTTTTCATGCATGGACTC+CGG + chr3_3:77334974-77334993 Msa0474430:intron 40.0%
CAAACTTTGCAATGTTCCCA+TGG - chr3_3:77335050-77335069 None:intergenic 40.0%
CAAACTTTGCAATGTTCCCA+TGG - chr3_3:77335050-77335069 None:intergenic 40.0%
CTTAACCACCCTTATCATCA+AGG + chr3_3:77335213-77335232 Msa0474430:intron 40.0%
!! TTTTGCCTTGATGATAAGGG+TGG - chr3_3:77335221-77335240 None:intergenic 40.0%
!! GAGGTTTTGCCTTGATGATA+AGG - chr3_3:77335225-77335244 None:intergenic 40.0%
TATCATCAAGGCAAAACCTC+AGG + chr3_3:77335225-77335244 Msa0474430:intron 40.0%
!!! TGCATCCCATCCTTTTTTGT+TGG + chr3_3:77335433-77335452 Msa0474430:intron 40.0%
TTGTTGGAATAAAAGAGGGC+TGG + chr3_3:77335449-77335468 Msa0474430:intron 40.0%
TGTTGGAATAAAAGAGGGCT+GGG + chr3_3:77335450-77335469 Msa0474430:intron 40.0%
AGTCAGGTTAAAAGAGGTAG+AGG - chr3_3:77335677-77335696 None:intergenic 40.0%
ACATCATTAGAGAGAGAGTG+GGG - chr3_3:77335808-77335827 None:intergenic 40.0%
GACATCATTAGAGAGAGAGT+GGG - chr3_3:77335809-77335828 None:intergenic 40.0%
TGACATCATTAGAGAGAGAG+TGG - chr3_3:77335810-77335829 None:intergenic 40.0%
GTGGTAAGACTAGACATGAT+AGG - chr3_3:77335841-77335860 None:intergenic 40.0%
GTACATCATCGTATTCAAGC+TGG - chr3_3:77336049-77336068 None:intergenic 40.0%
GGGTCCATAGTACAAAATGA+CGG - chr3_3:77336088-77336107 None:intergenic 40.0%
ATCTCCAACTTTCACCTCTA+AGG + chr3_3:77336144-77336163 Msa0474430:intron 40.0%
TCTACCTTAGAGGTGAAAGT+TGG - chr3_3:77336151-77336170 None:intergenic 40.0%
!! ATTCCGTCTTGTTTCTACTC+AGG + chr3_3:77336206-77336225 Msa0474430:intron 40.0%
TAACAATAGGACTGCACCAA+GGG - chr3_3:77336411-77336430 None:intergenic 40.0%
ATAACAATAGGACTGCACCA+AGG - chr3_3:77336412-77336431 None:intergenic 40.0%
TTGGTGCAGTCCTATTGTTA+TGG + chr3_3:77336411-77336430 Msa0474430:intron 40.0%
TGGTGCAGTCCTATTGTTAT+GGG + chr3_3:77336412-77336431 Msa0474430:intron 40.0%
TATCCAGGATATGTATGAGG+GGG - chr3_3:77336482-77336501 None:intergenic 40.0%
CTATCCAGGATATGTATGAG+GGG - chr3_3:77336483-77336502 None:intergenic 40.0%
GCTATCCAGGATATGTATGA+GGG - chr3_3:77336484-77336503 None:intergenic 40.0%
AGCTATCCAGGATATGTATG+AGG - chr3_3:77336485-77336504 None:intergenic 40.0%
TGCCTATATTAGAGCTATCC+AGG - chr3_3:77336497-77336516 None:intergenic 40.0%
GCTTTCCACAAAATCTCTCT+AGG + chr3_3:77336541-77336560 Msa0474430:intron 40.0%
! GAGTACCTAGAGAGATTTTG+TGG - chr3_3:77336549-77336568 None:intergenic 40.0%
!!! AATTTGGTTTTATGCCTGGG+AGG - chr3_3:77336678-77336697 None:intergenic 40.0%
TCCCAGGCATAAAACCAAAT+TGG + chr3_3:77336677-77336696 Msa0474430:intron 40.0%
CACGTTACGGATAACCAATT+TGG - chr3_3:77336694-77336713 None:intergenic 40.0%
TACCCTTTCCCATAACTTCA+TGG + chr3_3:77336741-77336760 Msa0474430:intron 40.0%
CAAGATTGCGCGAATTATAG+GGG - chr3_3:77336787-77336806 None:intergenic 40.0%
TCCCCCTTGTTCTTATAGAT+TGG + chr3_3:77336811-77336830 Msa0474430:intron 40.0%
TATGAGGACGAAGAAAATGC+CGG - chr3_3:77336863-77336882 None:intergenic 40.0%
ATCGAAGTGTGGAAAAGTCT+TGG - chr3_3:77336928-77336947 None:intergenic 40.0%
! AGACTTTTCCACACTTCGAT+AGG + chr3_3:77336928-77336947 Msa0474430:intron 40.0%
ACAACATACCTATCGAAGTG+TGG - chr3_3:77336939-77336958 None:intergenic 40.0%
ACTTCGATAGGTATGTTGTC+CGG + chr3_3:77336940-77336959 Msa0474430:intron 40.0%
GAAAAGGATGAGTAATGGCA+AGG - chr3_3:77336974-77336993 None:intergenic 40.0%
GCGTTGAAAAGGATGAGTAA+TGG - chr3_3:77336979-77336998 None:intergenic 40.0%
!! AGGTGAAAGAAGCGTTGAAA+AGG - chr3_3:77336990-77337009 None:intergenic 40.0%
TAACAGGTTAGACATCAGAG+AGG - chr3_3:77337055-77337074 None:intergenic 40.0%
ATGTCTAACCTGTTAGAGTC+TGG + chr3_3:77337060-77337079 Msa0474430:intron 40.0%
AGATCTTACCAGACTCTAAC+AGG - chr3_3:77337071-77337090 None:intergenic 40.0%
GGTGCAAGAGAGAGATATTA+AGG - chr3_3:77337139-77337158 None:intergenic 40.0%
!! GGATGAAGAGGGTATAGTTT+TGG - chr3_3:77337160-77337179 None:intergenic 40.0%
GGACCAAGTGAAGTGTATTA+AGG - chr3_3:77337181-77337200 None:intergenic 40.0%
TAATACACTTCACTTGGTCC+AGG + chr3_3:77337181-77337200 Msa0474430:intron 40.0%
AATCTTTAGGTACCAAGGAG+GGG - chr3_3:77337257-77337276 None:intergenic 40.0%
CAATCTTTAGGTACCAAGGA+GGG - chr3_3:77337258-77337277 None:intergenic 40.0%
!!! ATCTAGAGGTTTTGGACCTA+GGG - chr3_3:77337460-77337479 None:intergenic 40.0%
!!! AATCTAGAGGTTTTGGACCT+AGG - chr3_3:77337461-77337480 None:intergenic 40.0%
! TTGGGAGAATCTAGAGGTTT+TGG - chr3_3:77337468-77337487 None:intergenic 40.0%
AAGGTGGCAAAAGAGACATT+GGG - chr3_3:77337486-77337505 None:intergenic 40.0%
GATGGCTCATGAGATTAAGA+AGG - chr3_3:77337505-77337524 None:intergenic 40.0%
TAATGATATGTGGGAGAGGA+TGG - chr3_3:77337523-77337542 None:intergenic 40.0%
!! TGGAAGCGCTAATGATATGT+GGG - chr3_3:77337532-77337551 None:intergenic 40.0%
!! ATGGAAGCGCTAATGATATG+TGG - chr3_3:77337533-77337552 None:intergenic 40.0%
ATATCATTAGCGCTTCCATG+TGG + chr3_3:77337534-77337553 Msa0474430:intron 40.0%
AGATATTAGAGGGAGGTTTC+AGG - chr3_3:77337563-77337582 None:intergenic 40.0%
CAACACAAGATATTAGAGGG+AGG - chr3_3:77337570-77337589 None:intergenic 40.0%
CTCCCTCTAATATCTTGTGT+TGG + chr3_3:77337568-77337587 Msa0474430:intron 40.0%
! TGATGGATGTAAGGGTTAAG+AGG - chr3_3:77337671-77337690 None:intergenic 40.0%
!! GAGTAATGGTGATGGATGTA+AGG - chr3_3:77337680-77337699 None:intergenic 40.0%
CCAACATAGAGTAATGGTGA+TGG - chr3_3:77337688-77337707 None:intergenic 40.0%
CCATCACCATTACTCTATGT+TGG + chr3_3:77337685-77337704 Msa0474430:intron 40.0%
GAAATCGATCTGAGAACAAG+AGG + chr3_3:77337779-77337798 Msa0474430:intron 40.0%
TCTCATCACTTACAAGAGTG+GGG - chr3_3:77337805-77337824 None:intergenic 40.0%
CATCTCATCACTTACAAGAG+TGG - chr3_3:77337807-77337826 None:intergenic 40.0%
! TTCTAGGAGGGGATTTGAAT+GGG - chr3_3:77337977-77337996 None:intergenic 40.0%
! TTTCTAGGAGGGGATTTGAA+TGG - chr3_3:77337978-77337997 None:intergenic 40.0%
GGAGTGGAAGAAAGATATTG+TGG - chr3_3:77338174-77338193 None:intergenic 40.0%
CGAAGTTAGATCGAGAAATG+GGG - chr3_3:77338216-77338235 None:intergenic 40.0%
GCGAAGTTAGATCGAGAAAT+GGG - chr3_3:77338217-77338236 None:intergenic 40.0%
! GGATTTAAGCTTTGGTACAC+GGG - chr3_3:77338239-77338258 None:intergenic 40.0%
GCGAGAGAATTAGATAGTTC+AGG - chr3_3:77338260-77338279 None:intergenic 40.0%
TACAAGAAACTAAGTGGGTG+GGG - chr3_3:77338289-77338308 None:intergenic 40.0%
CTACAAGAAACTAAGTGGGT+GGG - chr3_3:77338290-77338309 None:intergenic 40.0%
GTGCCTACAAGAAACTAAGT+GGG - chr3_3:77338294-77338313 None:intergenic 40.0%
TGTGCCTACAAGAAACTAAG+TGG - chr3_3:77338295-77338314 None:intergenic 40.0%
TAGTAGACACTATGACTAGG+AGG - chr3_3:77338331-77338350 None:intergenic 40.0%
!!! GTAGGATTCGTTTTGGAACT+TGG - chr3_3:77338388-77338407 None:intergenic 40.0%
! CATGAGAGTAGGATTCGTTT+TGG - chr3_3:77338395-77338414 None:intergenic 40.0%
AGAAGCTAGTTCATGAGAGT+AGG - chr3_3:77338406-77338425 None:intergenic 40.0%
GTACAGTGTCAAATGAGCAA+GGG - chr3_3:77338502-77338521 None:intergenic 40.0%
AGTACAGTGTCAAATGAGCA+AGG - chr3_3:77338503-77338522 None:intergenic 40.0%
AAAATGGAGAGGGTTGTGTT+AGG - chr3_3:77338632-77338651 None:intergenic 40.0%
GGCCTTAAAATCAGAAGAGA+AGG + chr3_3:77338743-77338762 Msa0474430:intron 40.0%
!!! CGTCACGTTCTTGCTATTTT+TGG + chr3_3:77338799-77338818 Msa0474430:intron 40.0%
CGTAATAATGCCTGAACTTC+AGG - chr3_3:77339015-77339034 None:intergenic 40.0%
GTCCTGACTGAGAAGTTAAA+AGG + chr3_3:77339121-77339140 Msa0474430:intron 40.0%
!!! TCCCTTTTAACTTCTCAGTC+AGG - chr3_3:77339126-77339145 None:intergenic 40.0%
ATTCATAGGTTATTGCGGAG+AGG + chr3_3:77339192-77339211 Msa0474430:intron 40.0%
! AGGCTTTCTGAGGAAGAAAT+CGG + chr3_3:77339212-77339231 Msa0474430:CDS 40.0%
GTGGTTTGAAGGAGTTATTC+AGG + chr3_3:77339234-77339253 Msa0474430:CDS 40.0%
GCAAGTAGGATCTGAACTTA+TGG + chr3_3:77339316-77339335 Msa0474430:CDS 40.0%
! AATAACGGGACACTTGACTA+TGG + chr3_3:77339498-77339517 Msa0474430:CDS 40.0%
CTTAAATAAGCTGGAGAGAG+AGG + chr3_3:77339545-77339564 Msa0474430:CDS 40.0%
GAGAGAGGAAAATCTGTTGT+CGG + chr3_3:77339560-77339579 Msa0474430:CDS 40.0%
CAAGCAGCTTGTAAAGAGTT+TGG + chr3_3:77339636-77339655 Msa0474430:CDS 40.0%
CAGGATGGACAGATAGATTA+TGG + chr3_3:77339868-77339887 Msa0474430:intron 40.0%
GGATGGACAGATAGATTATG+GGG + chr3_3:77339870-77339889 Msa0474430:intron 40.0%
! ATTTGCTGCCATGATGAGAA+AGG + chr3_3:77339894-77339913 Msa0474430:CDS 40.0%
TTTGCTGCCATGATGAGAAA+GGG + chr3_3:77339895-77339914 Msa0474430:CDS 40.0%
ACCATTTCCCTTTCTCATCA+TGG - chr3_3:77339905-77339924 None:intergenic 40.0%
ATGATGAGAAAGGGAAATGG+TGG + chr3_3:77339904-77339923 Msa0474430:CDS 40.0%
TGATGAGAAAGGGAAATGGT+GGG + chr3_3:77339905-77339924 Msa0474430:CDS 40.0%
AGAGATGCTCTTGGAATCAT+AGG + chr3_3:77339964-77339983 Msa0474430:CDS 40.0%
CTCTTGGAATCATAGGCAAT+GGG + chr3_3:77339971-77339990 Msa0474430:CDS 40.0%
TAATCCGCCAATTTGTGTTG+TGG - chr3_3:77340182-77340201 None:intergenic 40.0%
AAGGACGAGAATAACCATCA+TGG + chr3_3:77340227-77340246 Msa0474430:three_prime_UTR 40.0%
AGAATAACCATCATGGTGTG+TGG + chr3_3:77340234-77340253 Msa0474430:three_prime_UTR 40.0%
!!! ATGTGGGTTTTGGTGGTGTT+GGG - chr3_3:77332398-77332417 None:intergenic 45.0%
AACACCACCAAAACCCACAT+GGG + chr3_3:77332398-77332417 Msa0474430:intron 45.0%
ACATAAGGGAGAACCCATGT+GGG - chr3_3:77332414-77332433 None:intergenic 45.0%
TACATAAGGGAGAACCCATG+TGG - chr3_3:77332415-77332434 None:intergenic 45.0%
AACTGGGTCAAGGTCAATTC+GGG + chr3_3:77332472-77332491 Msa0474430:intron 45.0%
TCACTGCACACACAACTCAA+CGG + chr3_3:77332503-77332522 Msa0474430:intron 45.0%
CCATGGATCCTCACAACATT+TGG - chr3_3:77332636-77332655 None:intergenic 45.0%
CCAAATGTTGTGAGGATCCA+TGG + chr3_3:77332633-77332652 Msa0474430:intron 45.0%
GAGGATCCATGGTACTTATG+AGG + chr3_3:77332644-77332663 Msa0474430:intron 45.0%
ACGCATCCTCATAAGTACCA+TGG - chr3_3:77332653-77332672 None:intergenic 45.0%
! GTTATGGAGCTTTGTGAAGG+TGG + chr3_3:77332687-77332706 Msa0474430:intron 45.0%
! TATGGAGCTTTGTGAAGGTG+GGG + chr3_3:77332689-77332708 Msa0474430:intron 45.0%
TGAACAAGAACATGGGAGAG+AGG + chr3_3:77333464-77333483 Msa0474430:intron 45.0%
GAACAAGAACATGGGAGAGA+GGG + chr3_3:77333465-77333484 Msa0474430:intron 45.0%
AACAAGAACATGGGAGAGAG+GGG + chr3_3:77333466-77333485 Msa0474430:intron 45.0%
AAAATGAACCGGGTGCTCAA+TGG + chr3_3:77333555-77333574 Msa0474430:intron 45.0%
AAATGAACCGGGTGCTCAAT+GGG + chr3_3:77333556-77333575 Msa0474430:intron 45.0%
TTCTTCGTACAAACCTGCAG+AGG - chr3_3:77333608-77333627 None:intergenic 45.0%
TAATGCTTGTGCAAGACCTC+TGG - chr3_3:77333895-77333914 None:intergenic 45.0%
GAGGTCTTGCACAAGCATTA+TGG + chr3_3:77333895-77333914 Msa0474430:CDS 45.0%
AGATAGATACCGGCCCAAAA+CGG - chr3_3:77333982-77334001 None:intergenic 45.0%
ACCGGAAATCAAGCTTTCCT+TGG - chr3_3:77334157-77334176 None:intergenic 45.0%
CGGAATGGGATTGAAAGCTA+TGG + chr3_3:77334336-77334355 Msa0474430:intron 45.0%
CTGCTTCAGGCGAGATAAAA+CGG - chr3_3:77334441-77334460 None:intergenic 45.0%
TCATTGCAGAGAACTGCTTC+AGG - chr3_3:77334454-77334473 None:intergenic 45.0%
!! CGTTGGCTAGTCTCGTATAA+AGG + chr3_3:77334703-77334722 Msa0474430:intron 45.0%
CTGCAGGGAATATCTTGGTT+TGG + chr3_3:77334846-77334865 Msa0474430:intron 45.0%
AACGCCTTATCCCACTAAGT+GGG + chr3_3:77335536-77335555 Msa0474430:intron 45.0%
GAGGAGAGTCAGGTTAAAAG+AGG - chr3_3:77335683-77335702 None:intergenic 45.0%
AGATCAAATGGAGGAGAGTC+AGG - chr3_3:77335693-77335712 None:intergenic 45.0%
CATCATTAGAGAGAGAGTGG+GGG - chr3_3:77335807-77335826 None:intergenic 45.0%
CGAGAGTAAAGTAAGCGTAG+CGG - chr3_3:77335888-77335907 None:intergenic 45.0%
CGCTTACTTTACTCTCGTGT+TGG + chr3_3:77335891-77335910 Msa0474430:intron 45.0%
! GTTGTATGGTACGGAGTGTT+GGG - chr3_3:77335927-77335946 None:intergenic 45.0%
TGTTGTATGGTACGGAGTGT+TGG - chr3_3:77335928-77335947 None:intergenic 45.0%
TCCGTACCATACAACATTGC+CGG + chr3_3:77335932-77335951 Msa0474430:intron 45.0%
ACCGGCAATGTTGTATGGTA+CGG - chr3_3:77335936-77335955 None:intergenic 45.0%
CTTATCGCACAAAACACCTG+AGG + chr3_3:77336003-77336022 Msa0474430:intron 45.0%
TTGAAATGGAGAAGAGCCTC+AGG - chr3_3:77336022-77336041 None:intergenic 45.0%
TTCAAGCTGGGTGGTTGAAA+TGG - chr3_3:77336036-77336055 None:intergenic 45.0%
ATCATCGTATTCAAGCTGGG+TGG - chr3_3:77336045-77336064 None:intergenic 45.0%
! GCAGATGATGTAGTCTTGCT+TGG - chr3_3:77336301-77336320 None:intergenic 45.0%
!! TACATCTCGGTGCTAACTCT+TGG + chr3_3:77336329-77336348 Msa0474430:intron 45.0%
! AGAGATTTTGTGGAAAGCCC+TGG - chr3_3:77336539-77336558 None:intergenic 45.0%
GTCTTGGCGATAGAGGAATT+GGG - chr3_3:77336912-77336931 None:intergenic 45.0%
AGTCTTGGCGATAGAGGAAT+TGG - chr3_3:77336913-77336932 None:intergenic 45.0%
TGGAAAAGTCTTGGCGATAG+AGG - chr3_3:77336919-77336938 None:intergenic 45.0%
TGAGTAATGGCAAGGCAGTT+GGG - chr3_3:77336966-77336985 None:intergenic 45.0%
ATGAGTAATGGCAAGGCAGT+TGG - chr3_3:77336967-77336986 None:intergenic 45.0%
AGAACGAAAGACAAGAGACC+TGG - chr3_3:77337202-77337221 None:intergenic 45.0%
CCAATCTTTAGGTACCAAGG+AGG - chr3_3:77337259-77337278 None:intergenic 45.0%
CCTCCTTGGTACCTAAAGAT+TGG + chr3_3:77337256-77337275 Msa0474430:intron 45.0%
GCGAGAACTCAAGCATTTGA+AGG - chr3_3:77337288-77337307 None:intergenic 45.0%
TAGGAAAGAGGCTAAGAAGG+CGG - chr3_3:77337319-77337338 None:intergenic 45.0%
AGCTAGGAAAGAGGCTAAGA+AGG - chr3_3:77337322-77337341 None:intergenic 45.0%
CTAGGGGTAAAGAATCTTGG+TGG - chr3_3:77337443-77337462 None:intergenic 45.0%
CACCAAGATTCTTTACCCCT+AGG + chr3_3:77337441-77337460 Msa0474430:intron 45.0%
GACCTAGGGGTAAAGAATCT+TGG - chr3_3:77337446-77337465 None:intergenic 45.0%
!!! TCTAGAGGTTTTGGACCTAG+GGG - chr3_3:77337459-77337478 None:intergenic 45.0%
GAGACATTGGGAGAATCTAG+AGG - chr3_3:77337474-77337493 None:intergenic 45.0%
GAAGGTGGCAAAAGAGACAT+TGG - chr3_3:77337487-77337506 None:intergenic 45.0%
GGCTCATGAGATTAAGAAGG+TGG - chr3_3:77337502-77337521 None:intergenic 45.0%
! AAATGCCACCACTTGATTCG+CGG + chr3_3:77337615-77337634 Msa0474430:intron 45.0%
GGATGTAAGGGTTAAGAGGA+GGG - chr3_3:77337667-77337686 None:intergenic 45.0%
TGGATGTAAGGGTTAAGAGG+AGG - chr3_3:77337668-77337687 None:intergenic 45.0%
TGTAAAGTCATACCGGGAGA+GGG - chr3_3:77337720-77337739 None:intergenic 45.0%
TTTGAATGGGCATGTAGGGA+GGG - chr3_3:77337964-77337983 None:intergenic 45.0%
ATTTGAATGGGCATGTAGGG+AGG - chr3_3:77337965-77337984 None:intergenic 45.0%
GGGATTTGAATGGGCATGTA+GGG - chr3_3:77337968-77337987 None:intergenic 45.0%
!!! AAGTTTTGGGAGGAGCTAGA+AGG - chr3_3:77338035-77338054 None:intergenic 45.0%
TGTTCTTCTAGTCCTACCTG+AGG + chr3_3:77338065-77338084 Msa0474430:intron 45.0%
AATTAGCGCTTATGCACCTC+AGG - chr3_3:77338084-77338103 None:intergenic 45.0%
GCATCATTGTGGATAAGGAG+TGG - chr3_3:77338190-77338209 None:intergenic 45.0%
GGTAGGCATCATTGTGGATA+AGG - chr3_3:77338195-77338214 None:intergenic 45.0%
AAATGGGGTAGGCATCATTG+TGG - chr3_3:77338201-77338220 None:intergenic 45.0%
GTTAGATCGAGAAATGGGGT+AGG - chr3_3:77338212-77338231 None:intergenic 45.0%
GGCGAAGTTAGATCGAGAAA+TGG - chr3_3:77338218-77338237 None:intergenic 45.0%
AACTAAGTGGGTGGGGAAAA+AGG - chr3_3:77338282-77338301 None:intergenic 45.0%
CCTACAAGAAACTAAGTGGG+TGG - chr3_3:77338291-77338310 None:intergenic 45.0%
CCACCCACTTAGTTTCTTGT+AGG + chr3_3:77338288-77338307 Msa0474430:intron 45.0%
TAGACACTATGACTAGGAGG+AGG - chr3_3:77338328-77338347 None:intergenic 45.0%
!! AAGTTTTACGTTGGCTGTCG+AGG + chr3_3:77338606-77338625 Msa0474430:intron 45.0%
! ACAACCCTCTCCATTTTACC+CGG + chr3_3:77338635-77338654 Msa0474430:intron 45.0%
! ATCAGAAGAGAAGGCATGCA+TGG + chr3_3:77338752-77338771 Msa0474430:intron 45.0%
! TCAGAAGAGAAGGCATGCAT+GGG + chr3_3:77338753-77338772 Msa0474430:intron 45.0%
TGCATGGGTTTCACTTCTGA+AGG + chr3_3:77338768-77338787 Msa0474430:intron 45.0%
TTTGGTTGTTGCCTCTAGCA+AGG + chr3_3:77338817-77338836 Msa0474430:intron 45.0%
ACAACCTTGACCTGAAGTTC+AGG + chr3_3:77339002-77339021 Msa0474430:intron 45.0%
AATGCCTGAACTTCAGGTCA+AGG - chr3_3:77339009-77339028 None:intergenic 45.0%
AGAGGTCTAGACACAAGCAA+CGG - chr3_3:77339087-77339106 None:intergenic 45.0%
TGTGTCTAGACCTCTATCAG+AGG + chr3_3:77339092-77339111 Msa0474430:intron 45.0%
! CTTTCTGAGGAAGAAATCGG+TGG + chr3_3:77339215-77339234 Msa0474430:CDS 45.0%
GGAAGAAATCGGTGGTTTGA+AGG + chr3_3:77339223-77339242 Msa0474430:CDS 45.0%
GCCATGATGAGAAAGGGAAA+TGG + chr3_3:77339901-77339920 Msa0474430:CDS 45.0%
! AGAAAGGGAAATGGTGGGAT+TGG + chr3_3:77339910-77339929 Msa0474430:CDS 45.0%
GCTCTTGGAATCATAGGCAA+TGG + chr3_3:77339970-77339989 Msa0474430:CDS 45.0%
CGAACCACAACACAAATTGG+CGG + chr3_3:77340175-77340194 Msa0474430:three_prime_UTR 45.0%
ACTTGTACCACACACCATGA+TGG - chr3_3:77340244-77340263 None:intergenic 45.0%
GTCGTAGATACTTGAGTCTC+TGG + chr3_3:77340262-77340281 Msa0474430:three_prime_UTR 45.0%
!! ATCTTAGTTTTCTCGAGGGG+AGG + chr3_3:77340354-77340373 Msa0474430:three_prime_UTR 45.0%
!! TCTTAGTTTTCTCGAGGGGA+GGG + chr3_3:77340355-77340374 Msa0474430:three_prime_UTR 45.0%
!! AATTATCAAATTTATAATTT+GGG - chr3_3:77339433-77339452 None:intergenic 5.0%
!!! TTTTGGTGGTGTTGGGTTGG+TGG - chr3_3:77332391-77332410 None:intergenic 50.0%
!!! CATGTGGGTTTTGGTGGTGT+TGG - chr3_3:77332399-77332418 None:intergenic 50.0%
CAACACCACCAAAACCCACA+TGG + chr3_3:77332397-77332416 Msa0474430:intron 50.0%
!! AGAACCCATGTGGGTTTTGG+TGG - chr3_3:77332405-77332424 None:intergenic 50.0%
CACTGCACACACAACTCAAC+GGG + chr3_3:77332504-77332523 Msa0474430:intron 50.0%
TCCGGGTCATTGTTCAGATG+CGG + chr3_3:77333005-77333024 Msa0474430:intron 50.0%
ACCGCATCTGAACAATGACC+CGG - chr3_3:77333009-77333028 None:intergenic 50.0%
ACAAGAACATGGGAGAGAGG+GGG + chr3_3:77333467-77333486 Msa0474430:intron 50.0%
! CACTTTTCCCATTGAGCACC+CGG - chr3_3:77333566-77333585 None:intergenic 50.0%
AACCTGATTCTGTCCTCTGC+AGG + chr3_3:77333592-77333611 Msa0474430:intron 50.0%
AACCTGCAGAGGACAGAATC+AGG - chr3_3:77333597-77333616 None:intergenic 50.0%
CCTCTGGCGCAACATAGTAT+GGG - chr3_3:77333879-77333898 None:intergenic 50.0%
ACCTCTGGCGCAACATAGTA+TGG - chr3_3:77333880-77333899 None:intergenic 50.0%
CTTGGTCAGTCTCTGTAGGT+GGG - chr3_3:77334115-77334134 None:intergenic 50.0%
CACCTACAGAGACTGACCAA+GGG + chr3_3:77334114-77334133 Msa0474430:intron 50.0%
ATCCCTTGGTCAGTCTCTGT+AGG - chr3_3:77334119-77334138 None:intergenic 50.0%
TTGATTTCCGGTCTGAGCCA+TGG + chr3_3:77334165-77334184 Msa0474430:CDS 50.0%
! TTGGCACTGTCTGAAATCCC+AGG - chr3_3:77334191-77334210 None:intergenic 50.0%
TGGGATTTCAGACAGTGCCA+AGG + chr3_3:77334190-77334209 Msa0474430:CDS 50.0%
CAACGCCTTATCCCACTAAG+TGG + chr3_3:77335535-77335554 Msa0474430:intron 50.0%
ACGCCTTATCCCACTAAGTG+GGG + chr3_3:77335537-77335556 Msa0474430:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr3_3:77335541-77335560 Msa0474430:intron 50.0%
TCTTCTTACCACGGCGTCTA+CGG + chr3_3:77335715-77335734 Msa0474430:intron 50.0%
AGGATGTTGCGTTGGATGAG+TGG - chr3_3:77335860-77335879 None:intergenic 50.0%
! AAGTAAGCGTAGCGGAGATG+AGG - chr3_3:77335880-77335899 None:intergenic 50.0%
GTCAGACCGGCAATGTTGTA+TGG - chr3_3:77335941-77335960 None:intergenic 50.0%
GAGAAGTGGGTCTACCTTAG+AGG - chr3_3:77336161-77336180 None:intergenic 50.0%
CCGCCTGAGTAGAAACAAGA+CGG - chr3_3:77336212-77336231 None:intergenic 50.0%
!! CCGTCTTGTTTCTACTCAGG+CGG + chr3_3:77336209-77336228 Msa0474430:intron 50.0%
! AGGCAAGCCTTAGAAGCGTA+CGG - chr3_3:77336238-77336257 None:intergenic 50.0%
TAAACGGGAGGCTAGAGACT+TGG - chr3_3:77336261-77336280 None:intergenic 50.0%
AGTCGAGGGAGGAGTTAAAC+GGG - chr3_3:77336276-77336295 None:intergenic 50.0%
GAGTCGAGGGAGGAGTTAAA+CGG - chr3_3:77336277-77336296 None:intergenic 50.0%
! AGTCTTGCTTGGTGAGTCGA+GGG - chr3_3:77336290-77336309 None:intergenic 50.0%
! TAGTCTTGCTTGGTGAGTCG+AGG - chr3_3:77336291-77336310 None:intergenic 50.0%
AAGGACTTAGGGTTGACCCT+TGG + chr3_3:77336392-77336411 Msa0474430:intron 50.0%
AAGCCCCCTCATACATATCC+TGG + chr3_3:77336476-77336495 Msa0474430:intron 50.0%
GAAAGCCCTGGAGAAGAAAG+GGG - chr3_3:77336527-77336546 None:intergenic 50.0%
GGAAAGCCCTGGAGAAGAAA+GGG - chr3_3:77336528-77336547 None:intergenic 50.0%
TGGAAAGCCCTGGAGAAGAA+AGG - chr3_3:77336529-77336548 None:intergenic 50.0%
CTACTTACTTCGACGCGTGA+TGG - chr3_3:77336638-77336657 None:intergenic 50.0%
TTGGCGATAGAGGAATTGGG+TGG - chr3_3:77336909-77336928 None:intergenic 50.0%
CAGGTTAGACATCAGAGAGG+AGG - chr3_3:77337052-77337071 None:intergenic 50.0%
GGGGTAAAGAATCTTGGTGG+TGG - chr3_3:77337440-77337459 None:intergenic 50.0%
GCGCTAATGATATGTGGGAG+AGG - chr3_3:77337527-77337546 None:intergenic 50.0%
AAAGAGAAGAGACCGTAGCG+GGG - chr3_3:77337643-77337662 None:intergenic 50.0%
CAAAGAGAAGAGACCGTAGC+GGG - chr3_3:77337644-77337663 None:intergenic 50.0%
GCAAAGAGAAGAGACCGTAG+CGG - chr3_3:77337645-77337664 None:intergenic 50.0%
CTGTAAAGTCATACCGGGAG+AGG - chr3_3:77337721-77337740 None:intergenic 50.0%
TGGTCTCGAGGAGGTAAATG+CGG - chr3_3:77337907-77337926 None:intergenic 50.0%
AGGGTTTCGAGAGGTTTCGA+GGG - chr3_3:77337945-77337964 None:intergenic 50.0%
GGGGATTTGAATGGGCATGT+AGG - chr3_3:77337969-77337988 None:intergenic 50.0%
GTTCCCACATCTTCGTGAAC+GGG - chr3_3:77338438-77338457 None:intergenic 50.0%
GGTTCCCACATCTTCGTGAA+CGG - chr3_3:77338439-77338458 None:intergenic 50.0%
! CAACCCTCTCCATTTTACCC+GGG + chr3_3:77338636-77338655 Msa0474430:intron 50.0%
AAGCCCGGGTAAAATGGAGA+GGG - chr3_3:77338642-77338661 None:intergenic 50.0%
! TCTCCATTTTACCCGGGCTT+GGG + chr3_3:77338642-77338661 Msa0474430:intron 50.0%
AGGATTAATCCTGCCAAGGC+CGG - chr3_3:77338669-77338688 None:intergenic 50.0%
TGCCTCTAGCAAGGAATACC+AGG + chr3_3:77338826-77338845 Msa0474430:intron 50.0%
GCCTCTAGCAAGGAATACCA+GGG + chr3_3:77338827-77338846 Msa0474430:intron 50.0%
ACCCTGGTATTCCTTGCTAG+AGG - chr3_3:77338831-77338850 None:intergenic 50.0%
CTAGCAAGGAATACCAGGGT+CGG + chr3_3:77338831-77338850 Msa0474430:intron 50.0%
ACCAGGGTCGGAAGCTAATA+TGG + chr3_3:77338843-77338862 Msa0474430:intron 50.0%
! TCCATATTAGCTTCCGACCC+TGG - chr3_3:77338847-77338866 None:intergenic 50.0%
GGACATTGTGCCTCTGATAG+AGG - chr3_3:77339105-77339124 None:intergenic 50.0%
TATTGCGGAGAGGCTTTCTG+AGG + chr3_3:77339202-77339221 Msa0474430:CDS 50.0%
! AGGGAAATGGTGGGATTGGA+AGG + chr3_3:77339914-77339933 Msa0474430:CDS 50.0%
!! TGGTGTTGGGTTGGTGGTGT+TGG - chr3_3:77332385-77332404 None:intergenic 55.0%
!!! GGGTTTTGGTGGTGTTGGGT+TGG - chr3_3:77332394-77332413 None:intergenic 55.0%
! GGGAGAACCCATGTGGGTTT+TGG - chr3_3:77332408-77332427 None:intergenic 55.0%
GGGTCATTGTTCAGATGCGG+TGG + chr3_3:77333008-77333027 Msa0474430:intron 55.0%
CAAGAACATGGGAGAGAGGG+GGG + chr3_3:77333468-77333487 Msa0474430:intron 55.0%
AAGAACATGGGAGAGAGGGG+GGG + chr3_3:77333469-77333488 Msa0474430:intron 55.0%
!! GGGGGAGGGGTGTTCAAATT+AGG + chr3_3:77333490-77333509 Msa0474430:intron 55.0%
CCCATACTATGTTGCGCCAG+AGG + chr3_3:77333876-77333895 Msa0474430:CDS 55.0%
ATGGACCTGAAGCAGACGTG+TGG + chr3_3:77333914-77333933 Msa0474430:CDS 55.0%
TAGATACCGGCCCAAAACGG+AGG - chr3_3:77333979-77333998 None:intergenic 55.0%
GTGGATGCAGGCTGTAGTGT+AGG + chr3_3:77334028-77334047 Msa0474430:intron 55.0%
CCTTGGTCAGTCTCTGTAGG+TGG - chr3_3:77334116-77334135 None:intergenic 55.0%
CCACCTACAGAGACTGACCA+AGG + chr3_3:77334113-77334132 Msa0474430:intron 55.0%
! CTGTCTGAAATCCCAGGCCA+TGG - chr3_3:77334185-77334204 None:intergenic 55.0%
TTTCTGTGTCAGGTCACCCG+TGG + chr3_3:77334372-77334391 Msa0474430:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG - chr3_3:77335543-77335562 None:intergenic 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr3_3:77335549-77335568 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr3_3:77335550-77335569 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + chr3_3:77335549-77335568 Msa0474430:intron 55.0%
CTTCTTACCACGGCGTCTAC+GGG + chr3_3:77335716-77335735 Msa0474430:intron 55.0%
CGGAGATGAGGATGTTGCGT+TGG - chr3_3:77335868-77335887 None:intergenic 55.0%
!! GTATGGTACGGAGTGTTGGG+CGG - chr3_3:77335924-77335943 None:intergenic 55.0%
CTATCGGACAGCAGTCAGAC+CGG - chr3_3:77335954-77335973 None:intergenic 55.0%
GCGGAAACCGTACGCTTCTA+AGG + chr3_3:77336228-77336247 Msa0474430:intron 55.0%
TAGTGTGAGGACGCAGGATG+GGG - chr3_3:77336452-77336471 None:intergenic 55.0%
CTAGTGTGAGGACGCAGGAT+GGG - chr3_3:77336453-77336472 None:intergenic 55.0%
ACTAGTGTGAGGACGCAGGA+TGG - chr3_3:77336454-77336473 None:intergenic 55.0%
TTCGACTAGTGTGAGGACGC+AGG - chr3_3:77336458-77336477 None:intergenic 55.0%
TCCTCACCCCTTTCTTCTCC+AGG + chr3_3:77336518-77336537 Msa0474430:intron 55.0%
CCTCACCCCTTTCTTCTCCA+GGG + chr3_3:77336519-77336538 Msa0474430:intron 55.0%
! CGTGATGGAGCGATATCGGA+CGG - chr3_3:77336623-77336642 None:intergenic 55.0%
! GACGCGTGATGGAGCGATAT+CGG - chr3_3:77336627-77336646 None:intergenic 55.0%
TATGCCTGGGAGGTCGACTA+TGG - chr3_3:77336668-77336687 None:intergenic 55.0%
GTGCTTCTTCTCCACTCGTC+CGG + chr3_3:77336841-77336860 Msa0474430:intron 55.0%
CGAAGAAAATGCCGGACGAG+TGG - chr3_3:77336855-77336874 None:intergenic 55.0%
TAATGGCAAGGCAGTTGGGC+CGG - chr3_3:77336962-77336981 None:intergenic 55.0%
GGAGGTTTCAGGCAACCACA+TGG - chr3_3:77337552-77337571 None:intergenic 55.0%
TGGGTAGTTAAGCCCTCTCC+CGG + chr3_3:77337705-77337724 Msa0474430:intron 55.0%
CTCGAGGAGGTAAATGCGGA+GGG - chr3_3:77337903-77337922 None:intergenic 55.0%
TCTCGAGGAGGTAAATGCGG+AGG - chr3_3:77337904-77337923 None:intergenic 55.0%
GAGGGTTTCGAGAGGTTTCG+AGG - chr3_3:77337946-77337965 None:intergenic 55.0%
CATGTAGGGAGGGTTTCGAG+AGG - chr3_3:77337954-77337973 None:intergenic 55.0%
AGCGCTTATGCACCTCAGGT+AGG - chr3_3:77338080-77338099 None:intergenic 55.0%
ACATCTTCGTGAACGGGTGC+GGG - chr3_3:77338432-77338451 None:intergenic 55.0%
CACATCTTCGTGAACGGGTG+CGG - chr3_3:77338433-77338452 None:intergenic 55.0%
GCACCCGTTCACGAAGATGT+GGG + chr3_3:77338432-77338451 Msa0474430:intron 55.0%
GTGAATGCTAGGTCGTTGCC+CGG - chr3_3:77338548-77338567 None:intergenic 55.0%
CAAGCCCGGGTAAAATGGAG+AGG - chr3_3:77338643-77338662 None:intergenic 55.0%
! CTCTCCATTTTACCCGGGCT+TGG + chr3_3:77338641-77338660 Msa0474430:intron 55.0%
! ATTTTACCCGGGCTTGGGAC+CGG + chr3_3:77338647-77338666 Msa0474430:intron 55.0%
AGAACATGGGAGAGAGGGGG+GGG + chr3_3:77333470-77333489 Msa0474430:intron 60.0%
GCACTCCACACGTCTGCTTC+AGG - chr3_3:77333922-77333941 None:intergenic 60.0%
GAAGCAGACGTGTGGAGTGC+TGG + chr3_3:77333922-77333941 Msa0474430:CDS 60.0%
!! TAAGCGGGGTGCCTCCGTTT+TGG + chr3_3:77333965-77333984 Msa0474430:CDS 60.0%
!! AAGCGGGGTGCCTCCGTTTT+GGG + chr3_3:77333966-77333985 Msa0474430:CDS 60.0%
! GTCAGGTCACCCGTGGATTG+TGG + chr3_3:77334379-77334398 Msa0474430:intron 60.0%
ACGGGAGGCTAGAGACTTGG+AGG - chr3_3:77336258-77336277 None:intergenic 60.0%
CGAGGGAGGAGTTAAACGGG+AGG - chr3_3:77336273-77336292 None:intergenic 60.0%
! CTTGCTTGGTGAGTCGAGGG+AGG - chr3_3:77336287-77336306 None:intergenic 60.0%
AGGACGCAGGATGGGGATAC+CGG - chr3_3:77336445-77336464 None:intergenic 60.0%
AGGGGGCTTCGACTAGTGTG+AGG - chr3_3:77336465-77336484 None:intergenic 60.0%
CCCTGGAGAAGAAAGGGGTG+AGG - chr3_3:77336522-77336541 None:intergenic 60.0%
GCTTCCATAGTCGACCTCCC+AGG + chr3_3:77336661-77336680 Msa0474430:intron 60.0%
! TCGTCGGATTCAGGAGCACG+AGG - chr3_3:77337010-77337029 None:intergenic 60.0%
! AGGTTTCGAGGGCGTGCATG+GGG - chr3_3:77337934-77337953 None:intergenic 60.0%
! GAGGTTTCGAGGGCGTGCAT+GGG - chr3_3:77337935-77337954 None:intergenic 60.0%
! AGAGGTTTCGAGGGCGTGCA+TGG - chr3_3:77337936-77337955 None:intergenic 60.0%
CGCACCCGTTCACGAAGATG+TGG + chr3_3:77338431-77338450 Msa0474430:intron 60.0%
GCCATACAGCGCGTTGCTTC+CGG + chr3_3:77338526-77338545 Msa0474430:intron 60.0%
CCATACAGCGCGTTGCTTCC+GGG + chr3_3:77338527-77338546 Msa0474430:intron 60.0%
GGTCCCAAGCCCGGGTAAAA+TGG - chr3_3:77338648-77338667 None:intergenic 60.0%
GAACATGGGAGAGAGGGGGG+GGG + chr3_3:77333471-77333490 Msa0474430:intron 65.0%
AACATGGGAGAGAGGGGGGG+GGG + chr3_3:77333472-77333491 Msa0474430:intron 65.0%
TTCCGGTCTGAGCCATGGCC+TGG + chr3_3:77334170-77334189 Msa0474430:CDS 65.0%
TCCGGTCTGAGCCATGGCCT+GGG + chr3_3:77334171-77334190 Msa0474430:CDS 65.0%
TCCCAGGCCATGGCTCAGAC+CGG - chr3_3:77334175-77334194 None:intergenic 65.0%
GAGAAGACCCGTAGACGCCG+TGG - chr3_3:77335726-77335745 None:intergenic 65.0%
GGGCTCCGCGAATCAAGTGG+TGG - chr3_3:77337623-77337642 None:intergenic 65.0%
TGATTCGCGGAGCCCCGCTA+CGG + chr3_3:77337628-77337647 Msa0474430:intron 65.0%
! TGGGGGGTATGGTCTCGAGG+AGG - chr3_3:77337916-77337935 None:intergenic 65.0%
! GCATGGGGGGTATGGTCTCG+AGG - chr3_3:77337919-77337938 None:intergenic 65.0%
! GTTTCGAGGGCGTGCATGGG+GGG - chr3_3:77337932-77337951 None:intergenic 65.0%
! GGTTTCGAGGGCGTGCATGG+GGG - chr3_3:77337933-77337952 None:intergenic 65.0%
ACATCCAGGCGGCGATGCAG+CGG + chr3_3:77338476-77338495 Msa0474430:intron 65.0%
CCCGGAAGCAACGCGCTGTA+TGG - chr3_3:77338530-77338549 None:intergenic 65.0%
!! GGGGTGCCTCCGTTTTGGGC+CGG + chr3_3:77333970-77333989 Msa0474430:CDS 70.0%
GCGGGGCTCCGCGAATCAAG+TGG - chr3_3:77337626-77337645 None:intergenic 70.0%
! GAGGGCGTGCATGGGGGGTA+TGG - chr3_3:77337927-77337946 None:intergenic 70.0%
ATGGGAGAGAGGGGGGGGGG+AGG + chr3_3:77333475-77333494 Msa0474430:intron 75.0%
TGGGAGAGAGGGGGGGGGGA+GGG + chr3_3:77333476-77333495 Msa0474430:intron 75.0%
CCAAGGCCGGTCCCAAGCCC+GGG - chr3_3:77338656-77338675 None:intergenic 75.0%
GCCAAGGCCGGTCCCAAGCC+CGG - chr3_3:77338657-77338676 None:intergenic 75.0%
GGCTTGGGACCGGCCTTGGC+AGG + chr3_3:77338657-77338676 Msa0474430:intron 75.0%
! GGGAGAGAGGGGGGGGGGAG+GGG + chr3_3:77333477-77333496 Msa0474430:intron 80.0%
! AGGGCCGCTGCATCGCCGCC+TGG - chr3_3:77338483-77338502 None:intergenic 80.0%
! CCCGGGCTTGGGACCGGCCT+TGG + chr3_3:77338653-77338672 Msa0474430:intron 80.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 77332254 77340399 77332254 ID=Msa0474430;Name=Msa0474430
chr3_3 mRNA 77332254 77340399 77332254 ID=Msa0474430-mRNA-1;Parent=Msa0474430;Name=Msa0474430-mRNA-1;_AED=0.38;_eAED=0.39;_QI=0|0.83|0.85|1|0.83|0.85|7|397|314
chr3_3 exon 77332254 77332260 77332254 ID=Msa0474430-mRNA-1:exon:20597;Parent=Msa0474430-mRNA-1
chr3_3 exon 77333848 77333991 77333848 ID=Msa0474430-mRNA-1:exon:20598;Parent=Msa0474430-mRNA-1
chr3_3 exon 77334123 77334275 77334123 ID=Msa0474430-mRNA-1:exon:20599;Parent=Msa0474430-mRNA-1
chr3_3 exon 77334384 77334499 77334384 ID=Msa0474430-mRNA-1:exon:20600;Parent=Msa0474430-mRNA-1
chr3_3 exon 77339200 77339367 77339200 ID=Msa0474430-mRNA-1:exon:20601;Parent=Msa0474430-mRNA-1
chr3_3 exon 77339486 77339710 77339486 ID=Msa0474430-mRNA-1:exon:20602;Parent=Msa0474430-mRNA-1
chr3_3 exon 77339871 77340399 77339871 ID=Msa0474430-mRNA-1:exon:20603;Parent=Msa0474430-mRNA-1
chr3_3 CDS 77332254 77332260 77332254 ID=Msa0474430-mRNA-1:cds;Parent=Msa0474430-mRNA-1
chr3_3 CDS 77333848 77333991 77333848 ID=Msa0474430-mRNA-1:cds;Parent=Msa0474430-mRNA-1
chr3_3 CDS 77334123 77334275 77334123 ID=Msa0474430-mRNA-1:cds;Parent=Msa0474430-mRNA-1
chr3_3 CDS 77334384 77334499 77334384 ID=Msa0474430-mRNA-1:cds;Parent=Msa0474430-mRNA-1
chr3_3 CDS 77339200 77339367 77339200 ID=Msa0474430-mRNA-1:cds;Parent=Msa0474430-mRNA-1
chr3_3 CDS 77339486 77339710 77339486 ID=Msa0474430-mRNA-1:cds;Parent=Msa0474430-mRNA-1
chr3_3 CDS 77339871 77340002 77339871 ID=Msa0474430-mRNA-1:cds;Parent=Msa0474430-mRNA-1
chr3_3 three_prime_UTR 77340003 77340399 77340003 ID=Msa0474430-mRNA-1:three_prime_utr;Parent=Msa0474430-mRNA-1
Gene Sequence

>Msa0474430

ATGAACAGTGAAATCTTTAGTGATGTTGTTGGAAGCCCATACTATGTTGCGCCAGAGGTCTTGCACAAGCATTATGGACCTGAAGCAGACGTGTGGAGTGCTGGCGTTATTTTGTACATCTTATTAAGCGGGGTGCCTCCGTTTTGGGCCGAGACTGACCAAGGGATCTTCAGACAAATTTTCCAAGGAAAGCTTGATTTCCGGTCTGAGCCATGGCCTGGGATTTCAGACAGTGCCAAGGATCTAATTCGAAAAATGCTTGATAGGAACCCAAAAACAAGATTTACAGCTCACCAAGTGCTCTGTCACCCGTGGATTGTGGATGATAACATTGCACCAGATAAACCTCTTGATTCTGCCGTTTTATCTCGCCTGAAGCAGTTCTCTGCAATGAATAAGCTTAAAAAGTTGGCTTTACGTGTTATTGCGGAGAGGCTTTCTGAGGAAGAAATCGGTGGTTTGAAGGAGTTATTCAGGATGCTTGATGCTGATAATAGTGGAACTATAACATTGGAAGAGTTAAAAGAAGGCTTAAAGCAAGTAGGATCTGAACTTATGGAGTCTGAAATCAAGGATCTTATGGATGCAGCAGATATTGATAATAACGGGACACTTGACTATGGCGAATTCATTGCTGCTACTGTGCACTTAAATAAGCTGGAGAGAGAGGAAAATCTGTTGTCGGCATTCTCATACTTTGACAAAGATGGTAGTGGTTACATAACTATCGACGAGATTCAAGCAGCTTGTAAAGAGTTTGGCTTAGATGATATCCACATTGATGAAATAGTCAAGGAAATTGATCAGGATAATGATGGACAGATAGATTATGGGGAATTTGCTGCCATGATGAGAAAGGGAAATGGTGGGATTGGAAGGAGAACCATGACAAGCACACTTAATTTCAGAGATGCTCTTGGAATCATAGGCAATGGGTCCAATTAA
Protein sequence

>Msa0474430

MNSEIFSDVVGSPYYVAPEVLHKHYGPEADVWSAGVILYILLSGVPPFWAETDQGIFRQIFQGKLDFRSEPWPGISDSAKDLIRKMLDRNPKTRFTAHQVLCHPWIVDDNIAPDKPLDSAVLSRLKQFSAMNKLKKLALRVIAERLSEEEIGGLKELFRMLDADNSGTITLEELKEGLKQVGSELMESEIKDLMDAADIDNNGTLDYGEFIAATVHLNKLEREENLLSAFSYFDKDGSGYITIDEIQAACKEFGLDDIHIDEIVKEIDQDNDGQIDYGEFAAMMRKGNGGIGRRTMTSTLNFRDALGIIGNGSN*