Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0474910 | XP_003602781.1 | 98.681 | 379 | 5 | 0 | 1 | 379 | 2 | 380 | 0.0 | 780 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0474910 | sp|Q0E0Y3|PUS7_ORYSJ | 69.231 | 377 | 105 | 3 | 13 | 379 | 8 | 383 | 0.0 | 539 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0474910 | G7J3D1 | 98.681 | 379 | 5 | 0 | 1 | 379 | 2 | 380 | 0.0 | 780 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0378940 | Msa0474910 | 0.911590 | 5.119669e-83 | -8.615850e-47 |
| Msa0474910 | Msa0605000 | 0.800112 | 1.679417e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0474910 | MtrunA17_Chr3g0131971 | 98.681 | 379 | 5 | 0 | 1 | 379 | 2 | 380 | 0.0 | 780 |
| Msa0474910 | MtrunA17_Chr1g0200011 | 25.490 | 306 | 185 | 9 | 52 | 323 | 29 | 325 | 5.11e-16 | 78.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0474910 | AT5G51140.1 | 68.508 | 362 | 94 | 4 | 26 | 379 | 46 | 395 | 5.36e-179 | 503 |
| Msa0474910 | AT5G51140.2 | 68.272 | 353 | 92 | 4 | 26 | 370 | 46 | 386 | 6.92e-172 | 486 |
| Msa0474910 | AT3G52260.2 | 25.000 | 300 | 193 | 7 | 55 | 323 | 34 | 332 | 1.49e-17 | 83.6 |
| Msa0474910 | AT3G52260.4 | 26.136 | 264 | 164 | 6 | 55 | 287 | 34 | 297 | 4.27e-17 | 82.0 |
| Msa0474910 | AT3G52260.1 | 25.581 | 258 | 161 | 6 | 55 | 281 | 34 | 291 | 7.07e-15 | 75.1 |
Find 105 sgRNAs with CRISPR-Local
Find 418 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACCCCTTCGGTGCCAAATT+TGG | 0.184524 | 3_3:+77945804 | None:intergenic |
| ATAAAATCTTGCTATTATTA+AGG | 0.224635 | 3_3:-77944935 | Msa0474910:three_prime_UTR |
| CGCGTTCATTTACAGTCTTC+TGG | 0.226994 | 3_3:-77946020 | Msa0474910:CDS |
| GGGATCAACCCAAGTTTATT+AGG | 0.253148 | 3_3:+77945017 | None:intergenic |
| TAGCATTTCTGGCTATAATA+AGG | 0.255944 | 3_3:+77949699 | None:intergenic |
| GTGTACCAACTGTCCAAATT+TGG | 0.306598 | 3_3:-77945817 | Msa0474910:CDS |
| AGTTTCGCCCAATCAGGATA+TGG | 0.308758 | 3_3:+77945093 | None:intergenic |
| TTATTCGCTGAGGAATTTAA+AGG | 0.319656 | 3_3:-77951848 | Msa0474910:CDS |
| TCGAGCATTATAGTCTATAT+TGG | 0.345385 | 3_3:+77948071 | None:intergenic |
| GCTTCTTTGACATCAAATTT+CGG | 0.348641 | 3_3:-77945900 | Msa0474910:CDS |
| TGCGGTAAAGGAGGATTTGC+TGG | 0.374155 | 3_3:+77952160 | None:intergenic |
| AATATATTGCAAAAGTAGTT+GGG | 0.377867 | 3_3:-77948833 | Msa0474910:CDS |
| TACAGCATGTCATTGGCTAT+TGG | 0.388217 | 3_3:+77945993 | None:intergenic |
| GAGAGAAGAGAAAGAGTGTA+TGG | 0.394418 | 3_3:-77952200 | Msa0474910:CDS |
| GAGTACCATTGCTACTAATC+CGG | 0.396097 | 3_3:+77946628 | None:intergenic |
| CAATATATTGCAAAAGTAGT+TGG | 0.398952 | 3_3:-77948834 | Msa0474910:CDS |
| CCAGCCCATGTTCTGCTTGA+AGG | 0.399831 | 3_3:+77950040 | None:intergenic |
| ACTGTTGATAGATCTATTAA+TGG | 0.400312 | 3_3:-77945957 | Msa0474910:CDS |
| ATGAATGCCCATATCCTGAT+TGG | 0.401822 | 3_3:-77945101 | Msa0474910:CDS |
| ATCAATGCTAAACTCCTCAT+TGG | 0.413066 | 3_3:+77945845 | None:intergenic |
| TTACAAACAGTTAGCACATC+TGG | 0.415839 | 3_3:+77951425 | None:intergenic |
| AGCTAAAGTTTCGCCCAATC+AGG | 0.416919 | 3_3:+77945087 | None:intergenic |
| ACGATGTAATCTTGCGGTAA+AGG | 0.424137 | 3_3:+77952148 | None:intergenic |
| TCTGGTTCTGTATGAAGAAT+AGG | 0.424198 | 3_3:+77951443 | None:intergenic |
| ACAGCATGTCATTGGCTATT+GGG | 0.433925 | 3_3:+77945994 | None:intergenic |
| ACTTGCACTAATGAAGTATA+TGG | 0.434589 | 3_3:+77944814 | None:intergenic |
| TATCGCAAGAACACTGTTGT+TGG | 0.444093 | 3_3:-77950066 | Msa0474910:CDS |
| AAGGTCAGAGACTCTACAAA+AGG | 0.453239 | 3_3:-77946675 | Msa0474910:CDS |
| CGGTGCCAAATTTGGACAGT+TGG | 0.457022 | 3_3:+77945812 | None:intergenic |
| ATATTTCTTGGCGCGTGAGT+TGG | 0.460423 | 3_3:-77952247 | Msa0474910:five_prime_UTR |
| ACAATCAAACCTAATAAACT+TGG | 0.469396 | 3_3:-77945026 | Msa0474910:three_prime_UTR |
| AGTCACTGGCCGCACTCATC+AGG | 0.471463 | 3_3:-77946583 | Msa0474910:intron |
| AGTTTATTAGGTTTGATTGT+CGG | 0.475071 | 3_3:+77945029 | None:intergenic |
| GATTTAACTACGTATGAAAC+CGG | 0.475395 | 3_3:+77951600 | None:intergenic |
| GATTCAAGTTGACGGTGAAA+TGG | 0.476238 | 3_3:-77951625 | Msa0474910:CDS |
| TTACTTACCGGGACAGATGC+AGG | 0.477862 | 3_3:+77951401 | None:intergenic |
| CTGTCCAAATTTGGCACCGA+AGG | 0.478848 | 3_3:-77945808 | Msa0474910:CDS |
| CTGTTGATAGATCTATTAAT+GGG | 0.482702 | 3_3:-77945956 | Msa0474910:CDS |
| CCTTCAAGCAGAACATGGGC+TGG | 0.487356 | 3_3:-77950040 | Msa0474910:CDS |
| AACGAAAATACCTCATCCTC+GGG | 0.488881 | 3_3:+77948804 | None:intergenic |
| AAACTTACATAATATTCATA+AGG | 0.492762 | 3_3:+77951821 | None:intergenic |
| CGACTGGATCGCCTTGTCTC+CGG | 0.493010 | 3_3:-77949725 | Msa0474910:CDS |
| TGATGAGTGCGGCCAGTGAC+TGG | 0.494032 | 3_3:+77946585 | None:intergenic |
| TGAGATGTACAGCATGTCAT+TGG | 0.495292 | 3_3:+77945986 | None:intergenic |
| TAAAGAATTGCATACCCCTT+CGG | 0.504219 | 3_3:+77945792 | None:intergenic |
| GCGATGAATTCGAAGTAGTA+TGG | 0.504359 | 3_3:+77952011 | None:intergenic |
| GTTTCGCCCAATCAGGATAT+GGG | 0.504686 | 3_3:+77945094 | None:intergenic |
| AGCTGTGCAGGTTAGCGAGC+AGG | 0.505409 | 3_3:-77944960 | Msa0474910:three_prime_UTR |
| TGAATGCCCATATCCTGATT+GGG | 0.506186 | 3_3:-77945100 | Msa0474910:CDS |
| CCCAGGTTATTTATACGTCA+TGG | 0.509828 | 3_3:-77944997 | Msa0474910:three_prime_UTR |
| TTACATTGTATGCGGTACTC+TGG | 0.510906 | 3_3:-77945138 | Msa0474910:CDS |
| GGCATCCTTCAAGCAGAACA+TGG | 0.516228 | 3_3:-77950045 | Msa0474910:CDS |
| TGTCTCAGCTGTCCATCGAC+TGG | 0.517338 | 3_3:-77949741 | Msa0474910:intron |
| TGGGGAATTTCCCGAGGATG+AGG | 0.518507 | 3_3:-77948814 | Msa0474910:intron |
| CAGGCATGAACCACCTGTGA+TGG | 0.518717 | 3_3:-77951477 | Msa0474910:CDS |
| AATAAACTTGGGTTGATCCC+AGG | 0.521445 | 3_3:-77945014 | Msa0474910:three_prime_UTR |
| TCTGGCTATAATAAGGAGTC+CGG | 0.521448 | 3_3:+77949706 | None:intergenic |
| TCCATGACGTATAAATAACC+TGG | 0.522363 | 3_3:+77944996 | None:intergenic |
| AGTACCATTGCTACTAATCC+GGG | 0.522821 | 3_3:+77946629 | None:intergenic |
| AAACGAAAATACCTCATCCT+CGG | 0.524656 | 3_3:+77948803 | None:intergenic |
| TGGTTGTTACAGATTGAGGC+TGG | 0.531299 | 3_3:-77948870 | Msa0474910:intron |
| TGAGGGAAAAGATCTAATGA+TGG | 0.534383 | 3_3:-77944859 | Msa0474910:three_prime_UTR |
| AGATATGATACTGATGAAGA+AGG | 0.536074 | 3_3:-77945168 | Msa0474910:CDS |
| TTGTAAGCCTGCATCTGTCC+CGG | 0.551212 | 3_3:-77951408 | Msa0474910:intron |
| GGGCATTCATATGTCCATCC+AGG | 0.555137 | 3_3:+77945114 | None:intergenic |
| TTTATTCCCTGCTATAGTGA+GGG | 0.557940 | 3_3:-77944876 | Msa0474910:three_prime_UTR |
| AGTTGACGGTGAAATGGTGC+CGG | 0.558967 | 3_3:-77951619 | Msa0474910:CDS |
| ATTATTAAGGCTCATTAGAG+AGG | 0.559065 | 3_3:-77944922 | Msa0474910:three_prime_UTR |
| TAGGTTAGTGCGGTGAAATG+TGG | 0.563936 | 3_3:-77951651 | Msa0474910:CDS |
| TGTCCAAATTTGGCACCGAA+GGG | 0.570374 | 3_3:-77945807 | Msa0474910:CDS |
| AGGTCAGAGACTCTACAAAA+GGG | 0.571744 | 3_3:-77946674 | Msa0474910:CDS |
| TGTGGAAGGATTCAAGTTGA+CGG | 0.572120 | 3_3:-77951633 | Msa0474910:CDS |
| CTTTATTCCCTGCTATAGTG+AGG | 0.572241 | 3_3:-77944877 | Msa0474910:three_prime_UTR |
| CAAGATTACATCGTTCGAAA+CGG | 0.576471 | 3_3:-77952139 | Msa0474910:intron |
| CAATCAAACCTAATAAACTT+GGG | 0.578764 | 3_3:-77945025 | Msa0474910:three_prime_UTR |
| GAGGGAAAAGATCTAATGAT+GGG | 0.578966 | 3_3:-77944858 | Msa0474910:three_prime_UTR |
| TTGCCTCCACAAAATTTACC+CGG | 0.581737 | 3_3:-77946647 | Msa0474910:CDS |
| TGCGGTACTCTGGACCTGGA+TGG | 0.588015 | 3_3:-77945128 | Msa0474910:CDS |
| ATACTGATGAAGAAGGTTTG+TGG | 0.590363 | 3_3:-77945161 | Msa0474910:CDS |
| AGACAAGGCGATCCAGTCGA+TGG | 0.592536 | 3_3:+77949729 | None:intergenic |
| ATAGACTATAATGCTCGAGA+AGG | 0.597554 | 3_3:-77948066 | Msa0474910:CDS |
| TGTATGCGGTACTCTGGACC+TGG | 0.597884 | 3_3:-77945132 | Msa0474910:CDS |
| TAATAAGGAGTCCGGAGACA+AGG | 0.599949 | 3_3:+77949714 | None:intergenic |
| TTTACCCGGATTAGTAGCAA+TGG | 0.600058 | 3_3:-77946633 | Msa0474910:CDS |
| GGAACATCACAAGCCATCAC+AGG | 0.601035 | 3_3:+77951464 | None:intergenic |
| AGAAGGAAGAAGCACAGCAG+AGG | 0.605852 | 3_3:-77948049 | Msa0474910:intron |
| ATATATTGCAAAAGTAGTTG+GGG | 0.609841 | 3_3:-77948832 | Msa0474910:CDS |
| TTAGTGCGGTGAAATGTGGA+AGG | 0.615192 | 3_3:-77951647 | Msa0474910:CDS |
| AGCCAGAAATGCTACAAAAG+CGG | 0.615290 | 3_3:-77949690 | Msa0474910:CDS |
| ATGTAATCTTGCGGTAAAGG+AGG | 0.615710 | 3_3:+77952151 | None:intergenic |
| TATTGTAGATTTATTCGCTG+AGG | 0.616478 | 3_3:-77951858 | Msa0474910:CDS |
| TTTGGACAGTTGGTACACAT+AGG | 0.616779 | 3_3:+77945822 | None:intergenic |
| CAGAGACTCTACAAAAGGGA+AGG | 0.630227 | 3_3:-77946670 | Msa0474910:CDS |
| GTATGGATCTTAGGTTAGTG+CGG | 0.630653 | 3_3:-77951661 | Msa0474910:intron |
| GTTTGTGGTTACATTGTATG+CGG | 0.636819 | 3_3:-77945146 | Msa0474910:CDS |
| GTCCAAATTTGGCACCGAAG+GGG | 0.645456 | 3_3:-77945806 | Msa0474910:intron |
| GCATCCTTCAAGCAGAACAT+GGG | 0.646483 | 3_3:-77950044 | Msa0474910:CDS |
| CCATGACGTATAAATAACCT+GGG | 0.653807 | 3_3:+77944997 | None:intergenic |
| TTCTTGCGATATTGACCACA+TGG | 0.665528 | 3_3:+77950078 | None:intergenic |
| TTGTCAAGAAAATTCCAATG+AGG | 0.670627 | 3_3:-77945859 | Msa0474910:CDS |
| ACATCACAAGCCATCACAGG+TGG | 0.674685 | 3_3:+77951467 | None:intergenic |
| AGTAGTTGGGGAATTTCCCG+AGG | 0.679238 | 3_3:-77948820 | Msa0474910:CDS |
| TTTCGAACGATGTAATCTTG+CGG | 0.684194 | 3_3:+77952142 | None:intergenic |
| GGTTCATAGGTTCATCCATG+TGG | 0.689269 | 3_3:-77950093 | Msa0474910:intron |
| AAGAGTGTATGGATATCGTG+TGG | 0.692668 | 3_3:-77952189 | Msa0474910:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTATATTTATATTTTA+TGG | - | chr3_3:77951722-77951741 | Msa0474910:intron | 0.0% |
| !! | ATGAGAATTAAAATAAAAAA+TGG | + | chr3_3:77945116-77945135 | None:intergenic | 10.0% |
| !!! | TTTTTGGATATAATATATAT+GGG | + | chr3_3:77947931-77947950 | None:intergenic | 10.0% |
| !!! | ATTTTTGGATATAATATATA+TGG | + | chr3_3:77947932-77947951 | None:intergenic | 10.0% |
| !!! | CTAAAAATAAATGTTTTATA+CGG | + | chr3_3:77949393-77949412 | None:intergenic | 10.0% |
| !!! | AATTTAAAATTTGTAGTTTT+CGG | + | chr3_3:77949548-77949567 | None:intergenic | 10.0% |
| !! | AAATAAAATTGATACATTAA+AGG | + | chr3_3:77949813-77949832 | None:intergenic | 10.0% |
| !! | AAACTTACATAATATTCATA+AGG | + | chr3_3:77945256-77945275 | None:intergenic | 15.0% |
| !! | TAAAATTATAAAACGTAGTT+AGG | + | chr3_3:77946223-77946242 | None:intergenic | 15.0% |
| !! | AGAAAATCCATTAAAATTTA+AGG | + | chr3_3:77946878-77946897 | None:intergenic | 15.0% |
| !! | ATGATGAAATGATTATATAA+TGG | + | chr3_3:77947095-77947114 | None:intergenic | 15.0% |
| !!! | TAAATTTTCTGACTAAATAT+AGG | - | chr3_3:77947606-77947625 | Msa0474910:intron | 15.0% |
| !!! | TTTTGGATATAATATATATG+GGG | + | chr3_3:77947930-77947949 | None:intergenic | 15.0% |
| !!! | ACTGTTTTCATTTTATTTTT+AGG | + | chr3_3:77949214-77949233 | None:intergenic | 15.0% |
| !!! | TTATGATATAGGTTATTTTT+AGG | - | chr3_3:77949276-77949295 | Msa0474910:intron | 15.0% |
| !! | TGGATTTAACAATAAATTTA+AGG | - | chr3_3:77949503-77949522 | Msa0474910:intron | 15.0% |
| !!! | TCATAAAGATTTTCATATAT+TGG | + | chr3_3:77950022-77950041 | None:intergenic | 15.0% |
| !! | AAATTAAATTACAAGATAGA+TGG | - | chr3_3:77950073-77950092 | Msa0474910:CDS | 15.0% |
| !!! | TATAAAAATTTAAAACCTCT+TGG | - | chr3_3:77950162-77950181 | Msa0474910:intron | 15.0% |
| !!! | ATAAAAATTTAAAACCTCTT+GGG | - | chr3_3:77950163-77950182 | Msa0474910:intron | 15.0% |
| !!! | TTGATAATTAAAATTCAAAG+TGG | - | chr3_3:77950318-77950337 | Msa0474910:intron | 15.0% |
| !! | TATTACATATATTCTCTATA+AGG | + | chr3_3:77950897-77950916 | None:intergenic | 15.0% |
| !! | TATATGTAATAAAGATAGAA+TGG | - | chr3_3:77950906-77950925 | Msa0474910:intron | 15.0% |
| !! | AAAGTTAATACAGATTATTT+CGG | - | chr3_3:77951363-77951382 | Msa0474910:intron | 15.0% |
| !!! | TTTTTCATTACCAAAAATTA+GGG | + | chr3_3:77951552-77951571 | None:intergenic | 15.0% |
| !! | AAAAACTTTCTATACAAATA+TGG | - | chr3_3:77951567-77951586 | Msa0474910:intron | 15.0% |
| !!! | CATATCTACAATTTAAAATT+TGG | + | chr3_3:77951893-77951912 | None:intergenic | 15.0% |
| !!! | ATAAAATCTTGCTATTATTA+AGG | - | chr3_3:77952139-77952158 | Msa0474910:intron | 15.0% |
| !! | CAACAAATTGAAGATTTATA+GGG | + | chr3_3:77945163-77945182 | None:intergenic | 20.0% |
| !! | TCAACAAATTGAAGATTTAT+AGG | + | chr3_3:77945164-77945183 | None:intergenic | 20.0% |
| !! | TGTATTCATAAGATAGTTTA+TGG | - | chr3_3:77945812-77945831 | Msa0474910:CDS | 20.0% |
| !!! | TGATAGTCTGAAAAATATTT+TGG | - | chr3_3:77946010-77946029 | Msa0474910:CDS | 20.0% |
| !!! | TTTTTTTCTTATTCTTGTTG+AGG | - | chr3_3:77946267-77946286 | Msa0474910:intron | 20.0% |
| !!! | TTATAACACTGTTTTGTTTT+GGG | - | chr3_3:77946591-77946610 | Msa0474910:CDS | 20.0% |
| !! | AATCATAAGAAATAAGTGTA+AGG | + | chr3_3:77946789-77946808 | None:intergenic | 20.0% |
| !!! | TTACACTTATTTCTTATGAT+TGG | - | chr3_3:77946788-77946807 | Msa0474910:intron | 20.0% |
| !!! | ATGGATTGAAAATGAATTTT+TGG | + | chr3_3:77947076-77947095 | None:intergenic | 20.0% |
| !! | ATAATCATTTCATCATAAAG+AGG | - | chr3_3:77947099-77947118 | Msa0474910:intron | 20.0% |
| !!! | TTGATTTTTCTTTTATATCC+CGG | - | chr3_3:77947269-77947288 | Msa0474910:intron | 20.0% |
| !! | GACTTATGAATTATAATCTT+TGG | - | chr3_3:77947668-77947687 | Msa0474910:intron | 20.0% |
| !!! | TTAAATGTATATTTTTGTCC+CGG | - | chr3_3:77947783-77947802 | Msa0474910:intron | 20.0% |
| !!! | TACATGATAATCACTATTTT+TGG | + | chr3_3:77947947-77947966 | None:intergenic | 20.0% |
| !! | AATATATTGCAAAAGTAGTT+GGG | - | chr3_3:77948241-77948260 | Msa0474910:intron | 20.0% |
| !! | GCATAAATAACTCAATTATA+AGG | - | chr3_3:77948464-77948483 | Msa0474910:intron | 20.0% |
| !! | ATTAATTATACTGTTATCAG+TGG | + | chr3_3:77948654-77948673 | None:intergenic | 20.0% |
| !! | AAAAAAAAATTGGTTAACCA+GGG | + | chr3_3:77948826-77948845 | None:intergenic | 20.0% |
| !! | TAAAAAAAAATTGGTTAACC+AGG | + | chr3_3:77948827-77948846 | None:intergenic | 20.0% |
| !! | CGTCTTAGATAAAAAAAAAT+TGG | + | chr3_3:77948836-77948855 | None:intergenic | 20.0% |
| !!! | AATGTTTTCTTAAATCAAAC+AGG | + | chr3_3:77949096-77949115 | None:intergenic | 20.0% |
| !! | TTAGGAATTTGTAATGAAAA+AGG | + | chr3_3:77949196-77949215 | None:intergenic | 20.0% |
| !! | TATTCTTATTATCAGTGAAT+CGG | - | chr3_3:77949241-77949260 | Msa0474910:intron | 20.0% |
| !!! | CAGTTAAAAAAAGTTTTTCA+CGG | + | chr3_3:77949353-77949372 | None:intergenic | 20.0% |
| !!! | ACATTTATTTTTAGTGTGTT+TGG | - | chr3_3:77949399-77949418 | Msa0474910:intron | 20.0% |
| !! | AATGTAAAGTGATTTATGTT+TGG | - | chr3_3:77949463-77949482 | Msa0474910:intron | 20.0% |
| !!! | AGAATTGATTTTATCATGTT+TGG | + | chr3_3:77949625-77949644 | None:intergenic | 20.0% |
| !! | GTTTATGATCATTTAGATAA+AGG | + | chr3_3:77949704-77949723 | None:intergenic | 20.0% |
| !!! | ATGTATCAATTTTATTTGTG+TGG | - | chr3_3:77949816-77949835 | Msa0474910:intron | 20.0% |
| !! | TAAAAGAATGCAACATATAT+TGG | + | chr3_3:77950045-77950064 | None:intergenic | 20.0% |
| !! | ATAATTAAAATTCAAAGTGG+CGG | - | chr3_3:77950321-77950340 | Msa0474910:intron | 20.0% |
| !!! | GAATATATGTTTGATAATGA+AGG | - | chr3_3:77950380-77950399 | Msa0474910:intron | 20.0% |
| !! | AGATATAAAAGATACATGAA+AGG | + | chr3_3:77950650-77950669 | None:intergenic | 20.0% |
| !! | AAGGTTTATTAATGAAACAA+TGG | + | chr3_3:77950878-77950897 | None:intergenic | 20.0% |
| !! | AAGTTAATACAGATTATTTC+GGG | - | chr3_3:77951364-77951383 | Msa0474910:intron | 20.0% |
| !!! | TTTTCATTACCAAAAATTAG+GGG | + | chr3_3:77951551-77951570 | None:intergenic | 20.0% |
| !!! | GTTTTTCATTACCAAAAATT+AGG | + | chr3_3:77951553-77951572 | None:intergenic | 20.0% |
| ! | AGATTTATAGGGTTTAACAA+GGG | + | chr3_3:77945152-77945171 | None:intergenic | 25.0% |
| ! | AAGATTTATAGGGTTTAACA+AGG | + | chr3_3:77945153-77945172 | None:intergenic | 25.0% |
| ! | TTTCAAACCTGTGTAAAAAA+TGG | + | chr3_3:77945515-77945534 | None:intergenic | 25.0% |
| ! | ACTTATTAAACTTACTTACC+GGG | + | chr3_3:77945687-77945706 | None:intergenic | 25.0% |
| ! | CACTTATTAAACTTACTTAC+CGG | + | chr3_3:77945688-77945707 | None:intergenic | 25.0% |
| !!! | TGTATGTGTTTTAGTTACAT+GGG | + | chr3_3:77945724-77945743 | None:intergenic | 25.0% |
| ! | ATGTAACTAAAACACATACA+GGG | - | chr3_3:77945724-77945743 | Msa0474910:intron | 25.0% |
| ! | AAAAAATAAGCCAATCCAAA+CGG | + | chr3_3:77945751-77945770 | None:intergenic | 25.0% |
| ! | GGAAATTATAGTGTAATCAT+TGG | + | chr3_3:77946110-77946129 | None:intergenic | 25.0% |
| ! | AAAATAGCTGTCTAAATTGT+GGG | + | chr3_3:77946134-77946153 | None:intergenic | 25.0% |
| !! | TCTTCAATTTGAAATGCATT+TGG | - | chr3_3:77946186-77946205 | Msa0474910:intron | 25.0% |
| !!! | CTTATAACACTGTTTTGTTT+TGG | - | chr3_3:77946590-77946609 | Msa0474910:CDS | 25.0% |
| ! | ATAAGAAATAAGTGTAAGGA+TGG | + | chr3_3:77946785-77946804 | None:intergenic | 25.0% |
| !! | TCGAAGTCCTTAAATTTTAA+TGG | - | chr3_3:77946868-77946887 | Msa0474910:intron | 25.0% |
| ! | AGGTGTATCATATAATGATA+AGG | - | chr3_3:77947119-77947138 | Msa0474910:intron | 25.0% |
| ! | GGGAAAATGAAAGTAAAAAT+TGG | + | chr3_3:77947220-77947239 | None:intergenic | 25.0% |
| ! | AAGAAAAATCAAGTACAGAA+TGG | + | chr3_3:77947261-77947280 | None:intergenic | 25.0% |
| !! | ACTTTTGTAAAACTAGATTC+CGG | + | chr3_3:77947805-77947824 | None:intergenic | 25.0% |
| !!! | ATGGAATCTAGTTTTTCAAA+TGG | - | chr3_3:77947852-77947871 | Msa0474910:intron | 25.0% |
| ! | AAATTCTACAGTTATAATGG+TGG | + | chr3_3:77948185-77948204 | None:intergenic | 25.0% |
| ! | ACCATTATAACTGTAGAATT+TGG | - | chr3_3:77948184-77948203 | Msa0474910:intron | 25.0% |
| ! | ACCAAATTCTACAGTTATAA+TGG | + | chr3_3:77948188-77948207 | None:intergenic | 25.0% |
| ! | CAATATATTGCAAAAGTAGT+TGG | - | chr3_3:77948240-77948259 | Msa0474910:intron | 25.0% |
| ! | ATATATTGCAAAAGTAGTTG+GGG | - | chr3_3:77948242-77948261 | Msa0474910:intron | 25.0% |
| !! | TACTTCAATAATCCTTTTTC+TGG | - | chr3_3:77948339-77948358 | Msa0474910:intron | 25.0% |
| !!! | TGTCATTTAGACTATCATTT+TGG | - | chr3_3:77948412-77948431 | Msa0474910:intron | 25.0% |
| !! | GTCATTTAGACTATCATTTT+GGG | - | chr3_3:77948413-77948432 | Msa0474910:intron | 25.0% |
| ! | ATAACTCAATTATAAGGCTT+TGG | - | chr3_3:77948470-77948489 | Msa0474910:intron | 25.0% |
| ! | TTTGTGTTTGAAAAAGCAAT+AGG | - | chr3_3:77948573-77948592 | Msa0474910:intron | 25.0% |
| ! | TAATATTGCCATAATGAGAA+CGG | - | chr3_3:77948689-77948708 | Msa0474910:intron | 25.0% |
| !!! | AATAGTATCTCAATTTTGAC+TGG | + | chr3_3:77948941-77948960 | None:intergenic | 25.0% |
| ! | ATGAAACAATATAGAACCAA+AGG | + | chr3_3:77949056-77949075 | None:intergenic | 25.0% |
| !!! | TTTGGTTCTATATTGTTTCA+TGG | - | chr3_3:77949055-77949074 | Msa0474910:intron | 25.0% |
| ! | TTTCATGGTAGAAAAATCTA+GGG | - | chr3_3:77949070-77949089 | Msa0474910:intron | 25.0% |
| ! | TCACATATTTGTACATGAAA+TGG | - | chr3_3:77949140-77949159 | Msa0474910:intron | 25.0% |
| !!! | AAGAACTGCTTTTATGATAT+AGG | - | chr3_3:77949265-77949284 | Msa0474910:intron | 25.0% |
| ! | TGGATGTATTTATGTAAATG+TGG | - | chr3_3:77949483-77949502 | Msa0474910:intron | 25.0% |
| !! | TGTATGTTTGGATTCAATTT+TGG | + | chr3_3:77949676-77949695 | None:intergenic | 25.0% |
| !!! | TATCAATTTTATTTGTGTGG+TGG | - | chr3_3:77949819-77949838 | Msa0474910:intron | 25.0% |
| !! | TTGTTGAATTAGTTGATACA+AGG | - | chr3_3:77949853-77949872 | Msa0474910:intron | 25.0% |
| ! | TGGTAAAAACTAATCATTGT+TGG | - | chr3_3:77950269-77950288 | Msa0474910:intron | 25.0% |
| ! | TCATCAGGTAAAAAAATTGT+TGG | - | chr3_3:77950506-77950525 | Msa0474910:intron | 25.0% |
| ! | TGCTAAATATATTCATGCAA+TGG | + | chr3_3:77950745-77950764 | None:intergenic | 25.0% |
| ! | ACCTAATACTATGCAAATAT+CGG | - | chr3_3:77951000-77951019 | Msa0474910:intron | 25.0% |
| !! | ACTGTTGATAGATCTATTAA+TGG | - | chr3_3:77951117-77951136 | Msa0474910:intron | 25.0% |
| !! | CTGTTGATAGATCTATTAAT+GGG | - | chr3_3:77951118-77951137 | Msa0474910:intron | 25.0% |
| !! | GAATTTTCTTGACAATCTTT+GGG | + | chr3_3:77951210-77951229 | None:intergenic | 25.0% |
| ! | TCATTATACTATAGACAGTT+AGG | + | chr3_3:77951402-77951421 | None:intergenic | 25.0% |
| ! | TGTCTATAGTATAATGATGT+TGG | - | chr3_3:77951405-77951424 | Msa0474910:intron | 25.0% |
| ! | AGAGACTTTCAACATTTATT+TGG | + | chr3_3:77951618-77951637 | None:intergenic | 25.0% |
| ! | AAATAAATGTTGAAAGTCTC+TGG | - | chr3_3:77951617-77951636 | Msa0474910:CDS | 25.0% |
| ! | TTTAACTAAATGTCTTGGAA+AGG | + | chr3_3:77951656-77951675 | None:intergenic | 25.0% |
| ! | TGTAGTTTAACTAAATGTCT+TGG | + | chr3_3:77951661-77951680 | None:intergenic | 25.0% |
| ! | AAAACTGAAAAACAGAGAAA+AGG | + | chr3_3:77951697-77951716 | None:intergenic | 25.0% |
| ! | CTGAGGTTAAAAAAATACAA+TGG | + | chr3_3:77951844-77951863 | None:intergenic | 25.0% |
| ! | AGTTTATTAGGTTTGATTGT+CGG | + | chr3_3:77952048-77952067 | None:intergenic | 25.0% |
| ! | ACAATCAAACCTAATAAACT+TGG | - | chr3_3:77952048-77952067 | Msa0474910:intron | 25.0% |
| ! | CAATCAAACCTAATAAACTT+GGG | - | chr3_3:77952049-77952068 | Msa0474910:intron | 25.0% |
| !! | TCGTTTTTCGCAATATTTCT+TGG | - | chr3_3:77944815-77944834 | Msa0474910:three_prime_UTR | 30.0% |
| TTCGATTTCGAAGTTGTTAT+TGG | + | chr3_3:77944993-77945012 | None:intergenic | 30.0% | |
| AAATTCTTCTTATATCGTGC+AGG | - | chr3_3:77945024-77945043 | Msa0474910:three_prime_UTR | 30.0% | |
| !! | ATCTTCAATTTGTTGATGCT+AGG | - | chr3_3:77945168-77945187 | Msa0474910:CDS | 30.0% |
| ATGCTAGGTTAAAAATCGAT+GGG | - | chr3_3:77945183-77945202 | Msa0474910:intron | 30.0% | |
| TATTGTAGATTTATTCGCTG+AGG | - | chr3_3:77945216-77945235 | Msa0474910:intron | 30.0% | |
| TTATTCGCTGAGGAATTTAA+AGG | - | chr3_3:77945226-77945245 | Msa0474910:intron | 30.0% | |
| TGATTGTTTGTATGGATCTT+AGG | - | chr3_3:77945404-77945423 | Msa0474910:intron | 30.0% | |
| GATTTAACTACGTATGAAAC+CGG | + | chr3_3:77945477-77945496 | None:intergenic | 30.0% | |
| !!! | AGATAAGCCATTTTTTACAC+AGG | - | chr3_3:77945505-77945524 | Msa0474910:intron | 30.0% |
| ! | CATTTGATGCTTTTCTTCAT+AGG | - | chr3_3:77945538-77945557 | Msa0474910:intron | 30.0% |
| CGGTAAGTAAGTTTAATAAG+TGG | - | chr3_3:77945686-77945705 | Msa0474910:intron | 30.0% | |
| !!! | CTGTATGTGTTTTAGTTACA+TGG | + | chr3_3:77945725-77945744 | None:intergenic | 30.0% |
| CATGTAACTAAAACACATAC+AGG | - | chr3_3:77945723-77945742 | Msa0474910:intron | 30.0% | |
| AAAAATAAGCCAATCCAAAC+GGG | + | chr3_3:77945750-77945769 | None:intergenic | 30.0% | |
| !! | TTGCATAAGTTGTTTTGCAT+AGG | + | chr3_3:77945776-77945795 | None:intergenic | 30.0% |
| CTGATTCTCTCTATTACTAT+GGG | + | chr3_3:77945955-77945974 | None:intergenic | 30.0% | |
| AGTAAAGAAATTGTGAGAAG+AGG | + | chr3_3:77945983-77946002 | None:intergenic | 30.0% | |
| GAAAATAGCTGTCTAAATTG+TGG | + | chr3_3:77946135-77946154 | None:intergenic | 30.0% | |
| TTTGACGTGAATATCTGATT+AGG | - | chr3_3:77946293-77946312 | Msa0474910:intron | 30.0% | |
| CTTAACTTTGCATTTGCAAA+AGG | + | chr3_3:77946347-77946366 | None:intergenic | 30.0% | |
| ! | CTTTTGCAAATGCAAAGTTA+AGG | - | chr3_3:77946345-77946364 | Msa0474910:intron | 30.0% |
| ! | TTTGTTGCATAGTATTGAGA+AGG | - | chr3_3:77946435-77946454 | Msa0474910:intron | 30.0% |
| CCAAATATTTGTCTTACAGA+CGG | + | chr3_3:77946533-77946552 | None:intergenic | 30.0% | |
| ! | AGAGTTTGCATCAATCATTT+TGG | - | chr3_3:77946674-77946693 | Msa0474910:CDS | 30.0% |
| AATTTAAGGACTTCGATTAC+CGG | + | chr3_3:77946864-77946883 | None:intergenic | 30.0% | |
| ! | ATTTTCTATTAGCTGCCTAA+GGG | - | chr3_3:77946891-77946910 | Msa0474910:intron | 30.0% |
| !! | AATTTTTGGATACGAAACAG+AGG | + | chr3_3:77947062-77947081 | None:intergenic | 30.0% |
| ATAAGTATGCAAAATGTGCA+CGG | + | chr3_3:77947181-77947200 | None:intergenic | 30.0% | |
| !! | TAGCATTTCTGGCTATAATA+AGG | + | chr3_3:77947378-77947397 | None:intergenic | 30.0% |
| ! | TTTTAGACAAGAGGTAAGTT+TGG | - | chr3_3:77947411-77947430 | Msa0474910:intron | 30.0% |
| TTTAGACAAGAGGTAAGTTT+GGG | - | chr3_3:77947412-77947431 | Msa0474910:intron | 30.0% | |
| TAGCAAATTATGCTTGAAAC+TGG | - | chr3_3:77947730-77947749 | Msa0474910:intron | 30.0% | |
| ! | CTTTTGTAAAACTAGATTCC+GGG | + | chr3_3:77947804-77947823 | None:intergenic | 30.0% |
| GACATATTCGTAAAGGTTAA+TGG | - | chr3_3:77947833-77947852 | Msa0474910:intron | 30.0% | |
| !!! | TCTAGTTTTTCAAATGGTTC+TGG | - | chr3_3:77947858-77947877 | Msa0474910:intron | 30.0% |
| TAAACTCAATTGACCATTGT+TGG | - | chr3_3:77947965-77947984 | Msa0474910:intron | 30.0% | |
| GCTATTGGTAAGATTTGTAT+TGG | - | chr3_3:77948030-77948049 | Msa0474910:intron | 30.0% | |
| AATTTGGTTGTTACAGATTG+AGG | - | chr3_3:77948200-77948219 | Msa0474910:intron | 30.0% | |
| TAACATAGTATAGCATCATC+AGG | - | chr3_3:77948303-77948322 | Msa0474910:intron | 30.0% | |
| CTTAATGATACTCCAGAAAA+AGG | + | chr3_3:77948354-77948373 | None:intergenic | 30.0% | |
| !!! | CTTTTTCTGGAGTATCATTA+AGG | - | chr3_3:77948352-77948371 | Msa0474910:intron | 30.0% |
| !! | TTAAGAGAGATTTTGACAGA+TGG | - | chr3_3:77948511-77948530 | Msa0474910:intron | 30.0% |
| TGTTTGAAAAAGCAATAGGA+TGG | - | chr3_3:77948577-77948596 | Msa0474910:intron | 30.0% | |
| GTTTGAAAAAGCAATAGGAT+GGG | - | chr3_3:77948578-77948597 | Msa0474910:intron | 30.0% | |
| TAAAACCTTCAAACAGTACT+TGG | - | chr3_3:77948723-77948742 | Msa0474910:intron | 30.0% | |
| CTTCAAAGAACTTTCATTTC+CGG | - | chr3_3:77948874-77948893 | Msa0474910:intron | 30.0% | |
| TTCAAAGAACTTTCATTTCC+GGG | - | chr3_3:77948875-77948894 | Msa0474910:intron | 30.0% | |
| TCGAGCATTATAGTCTATAT+TGG | + | chr3_3:77949006-77949025 | None:intergenic | 30.0% | |
| GTTTCATGGTAGAAAAATCT+AGG | - | chr3_3:77949069-77949088 | Msa0474910:intron | 30.0% | |
| ! | GCGGTGATATAAATTGTTTT+TGG | - | chr3_3:77949426-77949445 | Msa0474910:intron | 30.0% |
| ! | GTGATCAAAATTGATTCTAG+AGG | + | chr3_3:77949652-77949671 | None:intergenic | 30.0% |
| ATAAAGGACAAGTGTATGTT+TGG | + | chr3_3:77949688-77949707 | None:intergenic | 30.0% | |
| CTGGTGATCAAAATCTTAAA+AGG | + | chr3_3:77949774-77949793 | None:intergenic | 30.0% | |
| CTACATATGAAATTCCTTCT+GGG | - | chr3_3:77949891-77949910 | Msa0474910:intron | 30.0% | |
| TCATATATTGGTCCATCAAT+GGG | + | chr3_3:77950010-77950029 | None:intergenic | 30.0% | |
| TTCATATATTGGTCCATCAA+TGG | + | chr3_3:77950011-77950030 | None:intergenic | 30.0% | |
| ATCCTTAAAGACTCAATTGA+TGG | + | chr3_3:77950197-77950216 | None:intergenic | 30.0% | |
| GATAGTTCAGAAAACAACAT+GGG | - | chr3_3:77950214-77950233 | Msa0474910:intron | 30.0% | |
| ! | TATTGGTTATTATGACGTTC+TGG | - | chr3_3:77950249-77950268 | Msa0474910:intron | 30.0% |
| !!! | ATTTTTTTACCTGATGAGTG+CGG | + | chr3_3:77950503-77950522 | None:intergenic | 30.0% |
| TCAGGTAAAAAAATTGTTGG+CGG | - | chr3_3:77950509-77950528 | Msa0474910:intron | 30.0% | |
| CATATATGTGTATATACGCT+GGG | + | chr3_3:77950851-77950870 | None:intergenic | 30.0% | |
| GTTTAAATAAGATGAAGTGC+AGG | + | chr3_3:77950982-77951001 | None:intergenic | 30.0% | |
| TCCGATATTTGCATAGTATT+AGG | + | chr3_3:77951004-77951023 | None:intergenic | 30.0% | |
| GCTTCTTTGACATCAAATTT+CGG | - | chr3_3:77951174-77951193 | Msa0474910:intron | 30.0% | |
| ! | GGAATTTTCTTGACAATCTT+TGG | + | chr3_3:77951211-77951230 | None:intergenic | 30.0% |
| TTGTCAAGAAAATTCCAATG+AGG | - | chr3_3:77951215-77951234 | Msa0474910:intron | 30.0% | |
| ! | TATAATGATGTTGGTTGTGA+GGG | - | chr3_3:77951414-77951433 | Msa0474910:CDS | 30.0% |
| ! | TAATGTAAGCATTGTATCAG+AGG | + | chr3_3:77951503-77951522 | None:intergenic | 30.0% |
| ACATTTATTTGGATCAACAG+TGG | + | chr3_3:77951607-77951626 | None:intergenic | 30.0% | |
| GGATTACAAGATTAAGTTAC+TGG | + | chr3_3:77951794-77951813 | None:intergenic | 30.0% | |
| AACTTAATCTTGTAATCCAG+TGG | - | chr3_3:77951796-77951815 | Msa0474910:intron | 30.0% | |
| AGATATGATACTGATGAAGA+AGG | - | chr3_3:77951906-77951925 | Msa0474910:intron | 30.0% | |
| ATTATTAAGGCTCATTAGAG+AGG | - | chr3_3:77952152-77952171 | Msa0474910:CDS | 30.0% | |
| ACTTGCACTAATGAAGTATA+TGG | + | chr3_3:77952263-77952282 | None:intergenic | 30.0% | |
| TTTCGAACGATGTAATCTTG+CGG | + | chr3_3:77944935-77944954 | None:intergenic | 35.0% | |
| CAAGATTACATCGTTCGAAA+CGG | - | chr3_3:77944935-77944954 | Msa0474910:three_prime_UTR | 35.0% | |
| ! | GAAGTTGTTATTGGAATGTG+TGG | + | chr3_3:77944984-77945003 | None:intergenic | 35.0% |
| GATGCTAGGTTAAAAATCGA+TGG | - | chr3_3:77945182-77945201 | Msa0474910:intron | 35.0% | |
| ! | CGGTTAGTTGATTGTTTGTA+TGG | - | chr3_3:77945396-77945415 | Msa0474910:intron | 35.0% |
| !! | ATTTGTGACTGATGCTGTTT+TGG | - | chr3_3:77945571-77945590 | Msa0474910:intron | 35.0% |
| !! | TCTGGTTCTGTATGAAGAAT+AGG | + | chr3_3:77945634-77945653 | None:intergenic | 35.0% |
| TTACAAACAGTTAGCACATC+TGG | + | chr3_3:77945652-77945671 | None:intergenic | 35.0% | |
| AAAAATAAGCCAGTCCAAGT+AGG | - | chr3_3:77945929-77945948 | Msa0474910:CDS | 35.0% | |
| ! | GCTGATTCTCTCTATTACTA+TGG | + | chr3_3:77945956-77945975 | None:intergenic | 35.0% |
| GATTTAACAGCTCAAACCTA+TGG | + | chr3_3:77946322-77946341 | None:intergenic | 35.0% | |
| CAAATGCTATAAAGTCCTCA+TGG | + | chr3_3:77946419-77946438 | None:intergenic | 35.0% | |
| CCGTCTGTAAGACAAATATT+TGG | - | chr3_3:77946530-77946549 | Msa0474910:intron | 35.0% | |
| GATGCTTTGCAATACTTTGT+AGG | - | chr3_3:77946830-77946849 | Msa0474910:intron | 35.0% | |
| TACTTTGTAGGCCTTTATTC+CGG | - | chr3_3:77946842-77946861 | Msa0474910:intron | 35.0% | |
| ! | GATTTTCTATTAGCTGCCTA+AGG | - | chr3_3:77946890-77946909 | Msa0474910:intron | 35.0% |
| !! | CTAAAGCTGTGAATTTTAGC+TGG | - | chr3_3:77946960-77946979 | Msa0474910:intron | 35.0% |
| !!! | GTGAATTTTAGCTGGTTCAT+AGG | - | chr3_3:77946968-77946987 | Msa0474910:intron | 35.0% |
| TAAGTATGCAAAATGTGCAC+GGG | + | chr3_3:77947180-77947199 | None:intergenic | 35.0% | |
| ! | GGTAAACTCTGAGAGATTAA+GGG | + | chr3_3:77947240-77947259 | None:intergenic | 35.0% |
| ! | TGGTAAACTCTGAGAGATTA+AGG | + | chr3_3:77947241-77947260 | None:intergenic | 35.0% |
| TACGAAAATCGATAAAGTCC+GGG | + | chr3_3:77947290-77947309 | None:intergenic | 35.0% | |
| GTACGAAAATCGATAAAGTC+CGG | + | chr3_3:77947291-77947310 | None:intergenic | 35.0% | |
| GTTTGTCGACATATTCGTAA+AGG | - | chr3_3:77947826-77947845 | Msa0474910:intron | 35.0% | |
| TTGTTAATTGCAGCCAACAA+TGG | + | chr3_3:77947981-77948000 | None:intergenic | 35.0% | |
| !! | ATAGCTTTGTATATGCAGCT+TGG | + | chr3_3:77948015-77948034 | None:intergenic | 35.0% |
| AGCTGCATATACAAAGCTAT+TGG | - | chr3_3:77948015-77948034 | Msa0474910:intron | 35.0% | |
| ! | TACAGTTATAATGGTGGTGT+AGG | + | chr3_3:77948179-77948198 | None:intergenic | 35.0% |
| AAACGAAAATACCTCATCCT+CGG | + | chr3_3:77948274-77948293 | None:intergenic | 35.0% | |
| CTAAAAGAGATAACCTTGGT+TGG | - | chr3_3:77948437-77948456 | Msa0474910:intron | 35.0% | |
| TATTTATGCATCTCCAACCA+AGG | + | chr3_3:77948453-77948472 | None:intergenic | 35.0% | |
| GCTTTGGTTGCATTCTTTAT+GGG | - | chr3_3:77948486-77948505 | Msa0474910:intron | 35.0% | |
| CTTTGGTTGCATTCTTTATG+GGG | - | chr3_3:77948487-77948506 | Msa0474910:intron | 35.0% | |
| TTGACAGATGGTGAATAAGA+TGG | - | chr3_3:77948523-77948542 | Msa0474910:intron | 35.0% | |
| TTCAACAACCGTTCTCATTA+TGG | + | chr3_3:77948700-77948719 | None:intergenic | 35.0% | |
| ! | TCAAACCAAGTACTGTTTGA+AGG | + | chr3_3:77948731-77948750 | None:intergenic | 35.0% |
| ! | AAGAAGTGTGCACATATTGT+TGG | - | chr3_3:77948756-77948775 | Msa0474910:intron | 35.0% |
| ! | AGAAGTGTGCACATATTGTT+GGG | - | chr3_3:77948757-77948776 | Msa0474910:intron | 35.0% |
| AGTAACAACTAAACATACCC+TGG | - | chr3_3:77948806-77948825 | Msa0474910:intron | 35.0% | |
| GGCATCAACAATTATCTGAA+AGG | + | chr3_3:77948985-77949004 | None:intergenic | 35.0% | |
| ATAGACTATAATGCTCGAGA+AGG | - | chr3_3:77949008-77949027 | Msa0474910:intron | 35.0% | |
| !!! | TTTTAGTGTGTTTGGTTCTG+CGG | - | chr3_3:77949407-77949426 | Msa0474910:intron | 35.0% |
| CCAGAAGGAATTTCATATGT+AGG | + | chr3_3:77949893-77949912 | None:intergenic | 35.0% | |
| CCTACATATGAAATTCCTTC+TGG | - | chr3_3:77949890-77949909 | Msa0474910:intron | 35.0% | |
| ATGAAAAATGAAAGCCCAGA+AGG | + | chr3_3:77949908-77949927 | None:intergenic | 35.0% | |
| ! | TATGTTTTGCTACCCATTGA+TGG | - | chr3_3:77949995-77950014 | Msa0474910:intron | 35.0% |
| AATGCTGATATCAAGCCAAA+AGG | - | chr3_3:77950105-77950124 | Msa0474910:intron | 35.0% | |
| !! | TAAAGACTCAATTGATGGTG+AGG | + | chr3_3:77950192-77950211 | None:intergenic | 35.0% |
| CACCATCAATTGAGTCTTTA+AGG | - | chr3_3:77950192-77950211 | Msa0474910:intron | 35.0% | |
| GGATAGTTCAGAAAACAACA+TGG | - | chr3_3:77950213-77950232 | Msa0474910:intron | 35.0% | |
| ! | ACTAATCCGGGTAAATTTTG+TGG | + | chr3_3:77950436-77950455 | None:intergenic | 35.0% |
| TCAAATAAGCAGCTTAAGTC+TGG | + | chr3_3:77950555-77950574 | None:intergenic | 35.0% | |
| TGCTAAAAAGATCGACACTA+CGG | + | chr3_3:77950614-77950633 | None:intergenic | 35.0% | |
| TTCCAACCAAAAAACATTGC+TGG | - | chr3_3:77950687-77950706 | Msa0474910:intron | 35.0% | |
| !!! | TACCAGCAATGTTTTTTGGT+TGG | + | chr3_3:77950692-77950711 | None:intergenic | 35.0% |
| !!! | AAGGTACCAGCAATGTTTTT+TGG | + | chr3_3:77950696-77950715 | None:intergenic | 35.0% |
| GCATATATGTGTATATACGC+TGG | + | chr3_3:77950852-77950871 | None:intergenic | 35.0% | |
| ! | CTTCACATTTTCAACTGCTT+CGG | + | chr3_3:77950938-77950957 | None:intergenic | 35.0% |
| ATCAATGCTAAACTCCTCAT+TGG | + | chr3_3:77951232-77951251 | None:intergenic | 35.0% | |
| TAAAGAATTGCATACCCCTT+CGG | + | chr3_3:77951285-77951304 | None:intergenic | 35.0% | |
| TACTATAGACAGTTAGGCAT+AGG | + | chr3_3:77951396-77951415 | None:intergenic | 35.0% | |
| ! | GTATAATGATGTTGGTTGTG+AGG | - | chr3_3:77951413-77951432 | Msa0474910:CDS | 35.0% |
| !!! | TGAGGGTAGATTTTTAGTTG+TGG | - | chr3_3:77951431-77951450 | Msa0474910:CDS | 35.0% |
| GACTAGTGACATAACAATGA+GGG | + | chr3_3:77951462-77951481 | None:intergenic | 35.0% | |
| ! | CAAAAATTAGGGGTGTACAT+GGG | + | chr3_3:77951541-77951560 | None:intergenic | 35.0% |
| ! | TAAGCTTACATGTGACTTGT+TGG | - | chr3_3:77951749-77951768 | Msa0474910:intron | 35.0% |
| AAAATACAATGGTGTTCGTG+AGG | + | chr3_3:77951833-77951852 | None:intergenic | 35.0% | |
| TTTAGTGATAGATCTGTCTG+AGG | + | chr3_3:77951861-77951880 | None:intergenic | 35.0% | |
| ATACTGATGAAGAAGGTTTG+TGG | - | chr3_3:77951913-77951932 | Msa0474910:intron | 35.0% | |
| GTTTGTGGTTACATTGTATG+CGG | - | chr3_3:77951928-77951947 | Msa0474910:intron | 35.0% | |
| CCATGACGTATAAATAACCT+GGG | + | chr3_3:77952080-77952099 | None:intergenic | 35.0% | |
| TCCATGACGTATAAATAACC+TGG | + | chr3_3:77952081-77952100 | None:intergenic | 35.0% | |
| TTTATTCCCTGCTATAGTGA+GGG | - | chr3_3:77952198-77952217 | Msa0474910:CDS | 35.0% | |
| TGAGGGAAAAGATCTAATGA+TGG | - | chr3_3:77952215-77952234 | Msa0474910:exon | 35.0% | |
| GAGGGAAAAGATCTAATGAT+GGG | - | chr3_3:77952216-77952235 | Msa0474910:exon | 35.0% | |
| ! | GAGAGAAGAGAAAGAGTGTA+TGG | - | chr3_3:77944874-77944893 | Msa0474910:three_prime_UTR | 40.0% |
| ! | AAGAGTGTATGGATATCGTG+TGG | - | chr3_3:77944885-77944904 | Msa0474910:three_prime_UTR | 40.0% |
| ATGTAATCTTGCGGTAAAGG+AGG | + | chr3_3:77944926-77944945 | None:intergenic | 40.0% | |
| ACGATGTAATCTTGCGGTAA+AGG | + | chr3_3:77944929-77944948 | None:intergenic | 40.0% | |
| GCGATGAATTCGAAGTAGTA+TGG | + | chr3_3:77945066-77945085 | None:intergenic | 40.0% | |
| CTAGGTTAAAAATCGATGGG+CGG | - | chr3_3:77945186-77945205 | Msa0474910:intron | 40.0% | |
| TAGGTTAAAAATCGATGGGC+GGG | - | chr3_3:77945187-77945206 | Msa0474910:intron | 40.0% | |
| GTATGGATCTTAGGTTAGTG+CGG | - | chr3_3:77945413-77945432 | Msa0474910:intron | 40.0% | |
| !! | TGTGGAAGGATTCAAGTTGA+CGG | - | chr3_3:77945441-77945460 | Msa0474910:intron | 40.0% |
| !! | GATTCAAGTTGACGGTGAAA+TGG | - | chr3_3:77945449-77945468 | Msa0474910:intron | 40.0% |
| !!! | ACTGATGCTGTTTTGGTTTC+AGG | - | chr3_3:77945578-77945597 | Msa0474910:intron | 40.0% |
| TCTATTACTATGGGCCTACT+TGG | + | chr3_3:77945946-77945965 | None:intergenic | 40.0% | |
| ATAGCTGTCTAAATTGTGGG+TGG | + | chr3_3:77946131-77946150 | None:intergenic | 40.0% | |
| GACGTGAATATCTGATTAGG+AGG | - | chr3_3:77946296-77946315 | Msa0474910:intron | 40.0% | |
| ATATCTGATTAGGAGGCCAT+AGG | - | chr3_3:77946303-77946322 | Msa0474910:intron | 40.0% | |
| ! | GTGTTATAAGTGCTGCTGAA+TGG | + | chr3_3:77946580-77946599 | None:intergenic | 40.0% |
| TTTCCAGCTACTTCAAACGT+TGG | - | chr3_3:77946614-77946633 | Msa0474910:CDS | 40.0% | |
| CTACTTCAAACGTTGGCAAA+AGG | - | chr3_3:77946621-77946640 | Msa0474910:CDS | 40.0% | |
| GACTTCGATTACCGGAATAA+AGG | + | chr3_3:77946856-77946875 | None:intergenic | 40.0% | |
| TTCTTGCGATATTGACCACA+TGG | + | chr3_3:77946999-77947018 | None:intergenic | 40.0% | |
| TATCGCAAGAACACTGTTGT+TGG | - | chr3_3:77947008-77947027 | Msa0474910:intron | 40.0% | |
| TCTGGCTATAATAAGGAGTC+CGG | + | chr3_3:77947371-77947390 | None:intergenic | 40.0% | |
| AGCCAGAAATGCTACAAAAG+CGG | - | chr3_3:77947384-77947403 | Msa0474910:intron | 40.0% | |
| !!! | TTTTCAAATGGTTCTGGTCG+AGG | - | chr3_3:77947864-77947883 | Msa0474910:intron | 40.0% |
| ! | GGTGGTGTAGGAAAAAGTTT+TGG | + | chr3_3:77948167-77948186 | None:intergenic | 40.0% |
| AACGAAAATACCTCATCCTC+GGG | + | chr3_3:77948273-77948292 | None:intergenic | 40.0% | |
| GGGTCTAAAAGAGATAACCT+TGG | - | chr3_3:77948433-77948452 | Msa0474910:intron | 40.0% | |
| ! | GGCTTTGGTTGCATTCTTTA+TGG | - | chr3_3:77948485-77948504 | Msa0474910:intron | 40.0% |
| GCAGGTGTTTATTGTCACAT+TGG | - | chr3_3:77948606-77948625 | Msa0474910:intron | 40.0% | |
| TTGCTAAATTCAACACAGCC+CGG | + | chr3_3:77948896-77948915 | None:intergenic | 40.0% | |
| ! | AGGAGTGTGAAACTCTATAC+TGG | + | chr3_3:77949793-77949812 | None:intergenic | 40.0% |
| TCAGAAAACAACATGGGTGT+TGG | - | chr3_3:77950220-77950239 | Msa0474910:intron | 40.0% | |
| !! | ATGGGTGTTGGCTATTGTAT+TGG | - | chr3_3:77950232-77950251 | Msa0474910:intron | 40.0% |
| TAAAATTCAAAGTGGCGGCA+AGG | - | chr3_3:77950326-77950345 | Msa0474910:intron | 40.0% | |
| AAGGTCAGAGACTCTACAAA+AGG | - | chr3_3:77950399-77950418 | Msa0474910:intron | 40.0% | |
| AGGTCAGAGACTCTACAAAA+GGG | - | chr3_3:77950400-77950419 | Msa0474910:intron | 40.0% | |
| TTGCCTCCACAAAATTTACC+CGG | - | chr3_3:77950427-77950446 | Msa0474910:intron | 40.0% | |
| ! | AATCCGGGTAAATTTTGTGG+AGG | + | chr3_3:77950433-77950452 | None:intergenic | 40.0% |
| !! | TTTACCCGGATTAGTAGCAA+TGG | - | chr3_3:77950441-77950460 | Msa0474910:intron | 40.0% |
| AGTACCATTGCTACTAATCC+GGG | + | chr3_3:77950448-77950467 | None:intergenic | 40.0% | |
| GAGTACCATTGCTACTAATC+CGG | + | chr3_3:77950449-77950468 | None:intergenic | 40.0% | |
| AAACATTGCTGGTACCTTCA+AGG | - | chr3_3:77950698-77950717 | Msa0474910:intron | 40.0% | |
| AACATTGCTGGTACCTTCAA+GGG | - | chr3_3:77950699-77950718 | Msa0474910:intron | 40.0% | |
| CTGACAACACATTCCTGATT+AGG | - | chr3_3:77950798-77950817 | Msa0474910:intron | 40.0% | |
| TTGAAGCATGTGACCTAATC+AGG | + | chr3_3:77950814-77950833 | None:intergenic | 40.0% | |
| TGAACGCGTATCTACACAAA+AGG | + | chr3_3:77951042-77951061 | None:intergenic | 40.0% | |
| ! | ACAGCATGTCATTGGCTATT+GGG | + | chr3_3:77951083-77951102 | None:intergenic | 40.0% |
| ! | TACAGCATGTCATTGGCTAT+TGG | + | chr3_3:77951084-77951103 | None:intergenic | 40.0% |
| TGAGATGTACAGCATGTCAT+TGG | + | chr3_3:77951091-77951110 | None:intergenic | 40.0% | |
| ! | TTTGGACAGTTGGTACACAT+AGG | + | chr3_3:77951255-77951274 | None:intergenic | 40.0% |
| GTGTACCAACTGTCCAAATT+TGG | - | chr3_3:77951257-77951276 | Msa0474910:intron | 40.0% | |
| CGACTAGTGACATAACAATG+AGG | + | chr3_3:77951463-77951482 | None:intergenic | 40.0% | |
| ! | CCAAAAATTAGGGGTGTACA+TGG | + | chr3_3:77951542-77951561 | None:intergenic | 40.0% |
| ! | CCATGTACACCCCTAATTTT+TGG | - | chr3_3:77951539-77951558 | Msa0474910:intron | 40.0% |
| TTACATTGTATGCGGTACTC+TGG | - | chr3_3:77951936-77951955 | Msa0474910:intron | 40.0% | |
| ATGAATGCCCATATCCTGAT+TGG | - | chr3_3:77951973-77951992 | Msa0474910:intron | 40.0% | |
| TGAATGCCCATATCCTGATT+GGG | - | chr3_3:77951974-77951993 | Msa0474910:intron | 40.0% | |
| GGGATCAACCCAAGTTTATT+AGG | + | chr3_3:77952060-77952079 | None:intergenic | 40.0% | |
| !! | AATAAACTTGGGTTGATCCC+AGG | - | chr3_3:77952060-77952079 | Msa0474910:intron | 40.0% |
| CCCAGGTTATTTATACGTCA+TGG | - | chr3_3:77952077-77952096 | Msa0474910:intron | 40.0% | |
| !!! | GTTTTTTATCTGAGCTGTGC+AGG | - | chr3_3:77952102-77952121 | Msa0474910:intron | 40.0% |
| CTTTATTCCCTGCTATAGTG+AGG | - | chr3_3:77952197-77952216 | Msa0474910:CDS | 40.0% | |
| ! | TCTTTTCCCTCACTATAGCA+GGG | + | chr3_3:77952207-77952226 | None:intergenic | 40.0% |
| ! | ATCTTTTCCCTCACTATAGC+AGG | + | chr3_3:77952208-77952227 | None:intergenic | 40.0% |
| ATATTTCTTGGCGCGTGAGT+TGG | - | chr3_3:77944827-77944846 | Msa0474910:three_prime_UTR | 45.0% | |
| AGGTTAAAAATCGATGGGCG+GGG | - | chr3_3:77945188-77945207 | Msa0474910:intron | 45.0% | |
| TATGATGTTGCTCGCTAGCT+CGG | - | chr3_3:77945376-77945395 | Msa0474910:intron | 45.0% | |
| TAGGTTAGTGCGGTGAAATG+TGG | - | chr3_3:77945423-77945442 | Msa0474910:intron | 45.0% | |
| TTAGTGCGGTGAAATGTGGA+AGG | - | chr3_3:77945427-77945446 | Msa0474910:intron | 45.0% | |
| TCATGGTGAGGTATACGGAA+AGG | + | chr3_3:77946402-77946421 | None:intergenic | 45.0% | |
| TTTCCGTATACCTCACCATG+AGG | - | chr3_3:77946401-77946420 | Msa0474910:intron | 45.0% | |
| AGTCCTCATGGTGAGGTATA+CGG | + | chr3_3:77946407-77946426 | None:intergenic | 45.0% | |
| GCTATAAAGTCCTCATGGTG+AGG | + | chr3_3:77946414-77946433 | None:intergenic | 45.0% | |
| ! | TTGCCAACGTTTGAAGTAGC+TGG | + | chr3_3:77946620-77946639 | None:intergenic | 45.0% |
| ! | TTACAAAGCACCAGACCCTT+AGG | + | chr3_3:77946909-77946928 | None:intergenic | 45.0% |
| GGTTCATAGGTTCATCCATG+TGG | - | chr3_3:77946981-77947000 | Msa0474910:intron | 45.0% | |
| GCATCCTTCAAGCAGAACAT+GGG | - | chr3_3:77947030-77947049 | Msa0474910:intron | 45.0% | |
| CAGCTGAGACAATCATGTCA+AGG | + | chr3_3:77947324-77947343 | None:intergenic | 45.0% | |
| TAATAAGGAGTCCGGAGACA+AGG | + | chr3_3:77947363-77947382 | None:intergenic | 45.0% | |
| !! | GTCCGCTTTTGTAGCATTTC+TGG | + | chr3_3:77947389-77947408 | None:intergenic | 45.0% |
| !!! | AGCGGACAGTTTTAGACAAG+AGG | - | chr3_3:77947402-77947421 | Msa0474910:intron | 45.0% |
| ACAAGAGGTAAGTTTGGGCT+TGG | - | chr3_3:77947417-77947436 | Msa0474910:intron | 45.0% | |
| GCTTAAGCATTTGAGCTGTC+TGG | - | chr3_3:77947547-77947566 | Msa0474910:intron | 45.0% | |
| TGGTTGTTACAGATTGAGGC+TGG | - | chr3_3:77948204-77948223 | Msa0474910:intron | 45.0% | |
| GGTAGCAAAACATAGCACAG+AGG | + | chr3_3:77949989-77950008 | None:intergenic | 45.0% | |
| ! | CCTTCTCGCAATAGTCCTTT+TGG | + | chr3_3:77950123-77950142 | None:intergenic | 45.0% |
| CCAAAAGGACTATTGCGAGA+AGG | - | chr3_3:77950120-77950139 | Msa0474910:intron | 45.0% | |
| CAGAGACTCTACAAAAGGGA+AGG | - | chr3_3:77950404-77950423 | Msa0474910:intron | 45.0% | |
| ! | GTTTTATGCGAACCAGTCAC+TGG | - | chr3_3:77950477-77950496 | Msa0474910:intron | 45.0% |
| ACATTGCTGGTACCTTCAAG+GGG | - | chr3_3:77950700-77950719 | Msa0474910:intron | 45.0% | |
| TCAGCATCAAAACCCCTTGA+AGG | + | chr3_3:77950715-77950734 | None:intergenic | 45.0% | |
| GACTGTTGTGACACATCACT+AGG | + | chr3_3:77950777-77950796 | None:intergenic | 45.0% | |
| CGCGTATCTACACAAAAGGT+AGG | + | chr3_3:77951038-77951057 | None:intergenic | 45.0% | |
| CGCGTTCATTTACAGTCTTC+TGG | - | chr3_3:77951054-77951073 | Msa0474910:intron | 45.0% | |
| ! | TGTCCAAATTTGGCACCGAA+GGG | - | chr3_3:77951267-77951286 | Msa0474910:intron | 45.0% |
| ! | ATTAGGGGTGTACATGGGTT+GGG | + | chr3_3:77951536-77951555 | None:intergenic | 45.0% |
| ! | AATTAGGGGTGTACATGGGT+TGG | + | chr3_3:77951537-77951556 | None:intergenic | 45.0% |
| GTTTCGCCCAATCAGGATAT+GGG | + | chr3_3:77951983-77952002 | None:intergenic | 45.0% | |
| AGTTTCGCCCAATCAGGATA+TGG | + | chr3_3:77951984-77952003 | None:intergenic | 45.0% | |
| AGCTAAAGTTTCGCCCAATC+AGG | + | chr3_3:77951990-77952009 | None:intergenic | 45.0% | |
| TGCGGTAAAGGAGGATTTGC+TGG | + | chr3_3:77944917-77944936 | None:intergenic | 50.0% | |
| AGTTGACGGTGAAATGGTGC+CGG | - | chr3_3:77945455-77945474 | Msa0474910:intron | 50.0% | |
| ACATCACAAGCCATCACAGG+TGG | + | chr3_3:77945610-77945629 | None:intergenic | 50.0% | |
| GGAACATCACAAGCCATCAC+AGG | + | chr3_3:77945613-77945632 | None:intergenic | 50.0% | |
| TTGTAAGCCTGCATCTGTCC+CGG | - | chr3_3:77945666-77945685 | Msa0474910:intron | 50.0% | |
| TTACTTACCGGGACAGATGC+AGG | + | chr3_3:77945676-77945695 | None:intergenic | 50.0% | |
| AAACACATACAGGGCCCGTT+TGG | - | chr3_3:77945733-77945752 | Msa0474910:intron | 50.0% | |
| TACTATGGGCCTACTTGGAC+TGG | + | chr3_3:77945941-77945960 | None:intergenic | 50.0% | |
| GGTGAGGTATACGGAAAGGT+CGG | + | chr3_3:77946398-77946417 | None:intergenic | 50.0% | |
| TAACTGCCATGCCTTCGCAT+TGG | - | chr3_3:77946507-77946526 | Msa0474910:intron | 50.0% | |
| CTATTAGCTGCCTAAGGGTC+TGG | - | chr3_3:77946896-77946915 | Msa0474910:intron | 50.0% | |
| GGCATCCTTCAAGCAGAACA+TGG | - | chr3_3:77947029-77947048 | Msa0474910:intron | 50.0% | |
| AGTTTGGGCTTGGACTTGTC+TGG | - | chr3_3:77947427-77947446 | Msa0474910:intron | 50.0% | |
| AGTAGTTGGGGAATTTCCCG+AGG | - | chr3_3:77948254-77948273 | Msa0474910:intron | 50.0% | |
| ! | AGAAGGAAGAAGCACAGCAG+AGG | - | chr3_3:77949025-77949044 | Msa0474910:intron | 50.0% |
| ATACGCTGGGATAGCATGAC+TGG | + | chr3_3:77950838-77950857 | None:intergenic | 50.0% | |
| ! | CGGTGCCAAATTTGGACAGT+TGG | + | chr3_3:77951265-77951284 | None:intergenic | 50.0% |
| ! | CTGTCCAAATTTGGCACCGA+AGG | - | chr3_3:77951266-77951285 | Msa0474910:intron | 50.0% |
| ! | GTCCAAATTTGGCACCGAAG+GGG | - | chr3_3:77951268-77951287 | Msa0474910:intron | 50.0% |
| !! | TACCCCTTCGGTGCCAAATT+TGG | + | chr3_3:77951273-77951292 | None:intergenic | 50.0% |
| TGAGGCAGAGTAGAAACCAC+TGG | + | chr3_3:77951815-77951834 | None:intergenic | 50.0% | |
| GGGCATTCATATGTCCATCC+AGG | + | chr3_3:77951963-77951982 | None:intergenic | 50.0% | |
| CAGGCATGAACCACCTGTGA+TGG | - | chr3_3:77945597-77945616 | Msa0474910:intron | 55.0% | |
| CATACAGGGCCCGTTTGGAT+TGG | - | chr3_3:77945738-77945757 | Msa0474910:intron | 55.0% | |
| CTTACAGACGGCCAATGCGA+AGG | + | chr3_3:77946521-77946540 | None:intergenic | 55.0% | |
| CCAGCCCATGTTCTGCTTGA+AGG | + | chr3_3:77947037-77947056 | None:intergenic | 55.0% | |
| CCTTCAAGCAGAACATGGGC+TGG | - | chr3_3:77947034-77947053 | Msa0474910:intron | 55.0% | |
| TGTCTCAGCTGTCCATCGAC+TGG | - | chr3_3:77947333-77947352 | Msa0474910:intron | 55.0% | |
| AGACAAGGCGATCCAGTCGA+TGG | + | chr3_3:77947348-77947367 | None:intergenic | 55.0% | |
| TGGGGAATTTCCCGAGGATG+AGG | - | chr3_3:77948260-77948279 | Msa0474910:intron | 55.0% | |
| GCAATAGGATGGGCATGTGC+AGG | - | chr3_3:77948588-77948607 | Msa0474910:intron | 55.0% | |
| ! | GAAGAAGCACAGCAGAGGTG+AGG | - | chr3_3:77949030-77949049 | Msa0474910:intron | 55.0% |
| ! | TGATGGTGAGGACACCCAAG+AGG | + | chr3_3:77950180-77950199 | None:intergenic | 55.0% |
| ATTCAAAGTGGCGGCAAGGC+AGG | - | chr3_3:77950330-77950349 | Msa0474910:intron | 55.0% | |
| TGTATGCGGTACTCTGGACC+TGG | - | chr3_3:77951942-77951961 | Msa0474910:intron | 55.0% | |
| AGACGGCCAATGCGAAGGCA+TGG | + | chr3_3:77946516-77946535 | None:intergenic | 60.0% | |
| GAATGGCTGCTCGTGGCACT+TGG | + | chr3_3:77946563-77946582 | None:intergenic | 60.0% | |
| TGCTGCTGAATGGCTGCTCG+TGG | + | chr3_3:77946570-77946589 | None:intergenic | 60.0% | |
| CGACTGGATCGCCTTGTCTC+CGG | - | chr3_3:77947349-77947368 | Msa0474910:intron | 60.0% | |
| CACAGCAGAGGTGAGGCCTT+TGG | - | chr3_3:77949037-77949056 | Msa0474910:intron | 60.0% | |
| TGATGAGTGCGGCCAGTGAC+TGG | + | chr3_3:77950492-77950511 | None:intergenic | 60.0% | |
| AGTCACTGGCCGCACTCATC+AGG | - | chr3_3:77950491-77950510 | Msa0474910:intron | 60.0% | |
| TGCGGTACTCTGGACCTGGA+TGG | - | chr3_3:77951946-77951965 | Msa0474910:intron | 60.0% | |
| AGCTGTGCAGGTTAGCGAGC+AGG | - | chr3_3:77952114-77952133 | Msa0474910:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 77944761 | 77952335 | 77944761 | ID=Msa0474910;Name=Msa0474910 |
| chr3_3 | mRNA | 77944761 | 77952335 | 77944761 | ID=Msa0474910-mRNA-1;Parent=Msa0474910;Name=Msa0474910-mRNA-1;_AED=0.24;_eAED=0.24;_QI=102|1|1|1|1|1|12|328|379 |
| chr3_3 | exon | 77944761 | 77945188 | 77944761 | ID=Msa0474910-mRNA-1:exon:20940;Parent=Msa0474910-mRNA-1 |
| chr3_3 | exon | 77945807 | 77946045 | 77945807 | ID=Msa0474910-mRNA-1:exon:20939;Parent=Msa0474910-mRNA-1 |
| chr3_3 | exon | 77946584 | 77946694 | 77946584 | ID=Msa0474910-mRNA-1:exon:20938;Parent=Msa0474910-mRNA-1 |
| chr3_3 | exon | 77948050 | 77948106 | 77948050 | ID=Msa0474910-mRNA-1:exon:20937;Parent=Msa0474910-mRNA-1 |
| chr3_3 | exon | 77948815 | 77948880 | 77948815 | ID=Msa0474910-mRNA-1:exon:20936;Parent=Msa0474910-mRNA-1 |
| chr3_3 | exon | 77949673 | 77949755 | 77949673 | ID=Msa0474910-mRNA-1:exon:20935;Parent=Msa0474910-mRNA-1 |
| chr3_3 | exon | 77950028 | 77950106 | 77950028 | ID=Msa0474910-mRNA-1:exon:20934;Parent=Msa0474910-mRNA-1 |
| chr3_3 | exon | 77951409 | 77951496 | 77951409 | ID=Msa0474910-mRNA-1:exon:20933;Parent=Msa0474910-mRNA-1 |
| chr3_3 | exon | 77951570 | 77951670 | 77951570 | ID=Msa0474910-mRNA-1:exon:20932;Parent=Msa0474910-mRNA-1 |
| chr3_3 | exon | 77951829 | 77951906 | 77951829 | ID=Msa0474910-mRNA-1:exon:20931;Parent=Msa0474910-mRNA-1 |
| chr3_3 | exon | 77952007 | 77952050 | 77952007 | ID=Msa0474910-mRNA-1:exon:20930;Parent=Msa0474910-mRNA-1 |
| chr3_3 | exon | 77952140 | 77952335 | 77952140 | ID=Msa0474910-mRNA-1:exon:20929;Parent=Msa0474910-mRNA-1 |
| chr3_3 | five_prime_UTR | 77952234 | 77952335 | 77952234 | ID=Msa0474910-mRNA-1:five_prime_utr;Parent=Msa0474910-mRNA-1 |
| chr3_3 | CDS | 77952140 | 77952233 | 77952140 | ID=Msa0474910-mRNA-1:cds;Parent=Msa0474910-mRNA-1 |
| chr3_3 | CDS | 77952007 | 77952050 | 77952007 | ID=Msa0474910-mRNA-1:cds;Parent=Msa0474910-mRNA-1 |
| chr3_3 | CDS | 77951829 | 77951906 | 77951829 | ID=Msa0474910-mRNA-1:cds;Parent=Msa0474910-mRNA-1 |
| chr3_3 | CDS | 77951570 | 77951670 | 77951570 | ID=Msa0474910-mRNA-1:cds;Parent=Msa0474910-mRNA-1 |
| chr3_3 | CDS | 77951409 | 77951496 | 77951409 | ID=Msa0474910-mRNA-1:cds;Parent=Msa0474910-mRNA-1 |
| chr3_3 | CDS | 77950028 | 77950106 | 77950028 | ID=Msa0474910-mRNA-1:cds;Parent=Msa0474910-mRNA-1 |
| chr3_3 | CDS | 77949673 | 77949755 | 77949673 | ID=Msa0474910-mRNA-1:cds;Parent=Msa0474910-mRNA-1 |
| chr3_3 | CDS | 77948815 | 77948880 | 77948815 | ID=Msa0474910-mRNA-1:cds;Parent=Msa0474910-mRNA-1 |
| chr3_3 | CDS | 77948050 | 77948106 | 77948050 | ID=Msa0474910-mRNA-1:cds;Parent=Msa0474910-mRNA-1 |
| chr3_3 | CDS | 77946584 | 77946694 | 77946584 | ID=Msa0474910-mRNA-1:cds;Parent=Msa0474910-mRNA-1 |
| chr3_3 | CDS | 77945807 | 77946045 | 77945807 | ID=Msa0474910-mRNA-1:cds;Parent=Msa0474910-mRNA-1 |
| chr3_3 | CDS | 77945089 | 77945188 | 77945089 | ID=Msa0474910-mRNA-1:cds;Parent=Msa0474910-mRNA-1 |
| chr3_3 | three_prime_UTR | 77944761 | 77945088 | 77944761 | ID=Msa0474910-mRNA-1:three_prime_utr;Parent=Msa0474910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
