Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0378940 | XP_003602781.1 | 98.417 | 379 | 6 | 0 | 1 | 379 | 2 | 380 | 0.0 | 779 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0378940 | sp|Q0E0Y3|PUS7_ORYSJ | 68.966 | 377 | 106 | 3 | 13 | 379 | 8 | 383 | 0.0 | 537 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0378940 | G7J3D1 | 98.417 | 379 | 6 | 0 | 1 | 379 | 2 | 380 | 0.0 | 779 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0378940 | Msa0474910 | 0.911590 | 5.119669e-83 | -8.615850e-47 |
| Msa0378940 | Msa0609000 | 0.800763 | 1.237412e-48 | -8.615850e-47 |
| Msa0378940 | Msa1197320 | 0.802177 | 6.348756e-49 | -8.615850e-47 |
| Msa0378940 | Msa1362090 | 0.815163 | 1.063991e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0378940 | MtrunA17_Chr3g0131971 | 98.417 | 379 | 6 | 0 | 1 | 379 | 2 | 380 | 0.0 | 779 |
| Msa0378940 | MtrunA17_Chr1g0200011 | 25.490 | 306 | 185 | 9 | 52 | 323 | 29 | 325 | 3.18e-16 | 79.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0378940 | AT5G51140.1 | 68.785 | 362 | 93 | 4 | 26 | 379 | 46 | 395 | 3.07e-179 | 503 |
| Msa0378940 | AT5G51140.2 | 68.555 | 353 | 91 | 4 | 26 | 370 | 46 | 386 | 4.09e-172 | 486 |
| Msa0378940 | AT3G52260.2 | 25.000 | 300 | 193 | 7 | 55 | 323 | 34 | 332 | 8.49e-18 | 84.3 |
| Msa0378940 | AT3G52260.4 | 26.136 | 264 | 164 | 6 | 55 | 287 | 34 | 297 | 2.14e-17 | 82.8 |
| Msa0378940 | AT3G52260.1 | 25.581 | 258 | 161 | 6 | 55 | 281 | 34 | 291 | 3.89e-15 | 75.9 |
| Msa0378940 | AT3G52260.3 | 25.726 | 241 | 149 | 5 | 81 | 291 | 91 | 331 | 1.33e-12 | 68.9 |
Find 105 sgRNAs with CRISPR-Local
Find 420 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACCCCTTCGGTGCCAAATT+TGG | 0.184524 | 3_1:+79806234 | None:intergenic |
| ATAAAATCTTGCTATTATTA+AGG | 0.224635 | 3_1:-79805365 | Msa0378940:three_prime_UTR |
| CGCGTTCATTTACAGTCTTC+TGG | 0.226994 | 3_1:-79806450 | Msa0378940:CDS |
| GGGATCAACCCAAGTTTATT+AGG | 0.253148 | 3_1:+79805447 | None:intergenic |
| TAGCATTTCTGGCTATAATA+AGG | 0.255944 | 3_1:+79810113 | None:intergenic |
| GTGTACCAACTGTCCAAATT+TGG | 0.306598 | 3_1:-79806247 | Msa0378940:CDS |
| AGTTTCGCCCAATCAGGATA+TGG | 0.308758 | 3_1:+79805523 | None:intergenic |
| TTATTCGCTGAGGAATTTAA+AGG | 0.319656 | 3_1:-79812266 | Msa0378940:CDS |
| AGTGCAAGTTTACTCAATTT+CGG | 0.343532 | 3_1:-79805230 | Msa0378940:three_prime_UTR |
| TCGAGCATTATAGTCTATAT+TGG | 0.345385 | 3_1:+79808352 | None:intergenic |
| GCTTCTTTGACATCAAATTT+CGG | 0.348641 | 3_1:-79806330 | Msa0378940:CDS |
| TGCGGTAAAGGAGGATTTGC+TGG | 0.374155 | 3_1:+79812584 | None:intergenic |
| AATATATTGCAAAAGTAGTT+GGG | 0.377867 | 3_1:-79809227 | Msa0378940:CDS |
| TACAGCATGTCATTGGCTAT+TGG | 0.388217 | 3_1:+79806423 | None:intergenic |
| GAGAGAAGAGAAAGAGTGTA+TGG | 0.394418 | 3_1:-79812624 | Msa0378940:CDS |
| GAGTACCATTGCTACTAATC+CGG | 0.396097 | 3_1:+79807059 | None:intergenic |
| CAATATATTGCAAAAGTAGT+TGG | 0.398952 | 3_1:-79809228 | Msa0378940:CDS |
| CCAGCCCATGTTCTGCTTGA+AGG | 0.399831 | 3_1:+79810454 | None:intergenic |
| ACTGTTGATAGATCTATTAA+TGG | 0.400312 | 3_1:-79806387 | Msa0378940:CDS |
| ATGAATGCCCATATCCTGAT+TGG | 0.401822 | 3_1:-79805531 | Msa0378940:CDS |
| ATCAATGCTAAACTCCTCAT+TGG | 0.413066 | 3_1:+79806275 | None:intergenic |
| TTACAAACAGTTAGCACATC+TGG | 0.415839 | 3_1:+79811843 | None:intergenic |
| AGCTAAAGTTTCGCCCAATC+AGG | 0.416919 | 3_1:+79805517 | None:intergenic |
| ACGATGTAATCTTGCGGTAA+AGG | 0.424137 | 3_1:+79812572 | None:intergenic |
| TCTGGTTCTGTATGAAGAAT+AGG | 0.424198 | 3_1:+79811861 | None:intergenic |
| ACAGCATGTCATTGGCTATT+GGG | 0.433925 | 3_1:+79806424 | None:intergenic |
| ACTTGCACTAATGAAGTATA+TGG | 0.434589 | 3_1:+79805244 | None:intergenic |
| TATCGCAAGAACACTGTTGT+TGG | 0.444093 | 3_1:-79810480 | Msa0378940:CDS |
| AAGGTCAGAGACTCTACAAA+AGG | 0.453239 | 3_1:-79807106 | Msa0378940:CDS |
| CGGTGCCAAATTTGGACAGT+TGG | 0.457022 | 3_1:+79806242 | None:intergenic |
| ATATTTCTTGGCGCGTGAGT+TGG | 0.460423 | 3_1:-79812671 | Msa0378940:five_prime_UTR |
| ACAATCAAACCTAATAAACT+TGG | 0.469396 | 3_1:-79805456 | Msa0378940:three_prime_UTR |
| AGTCACTGGCCGCACTCATC+AGG | 0.471463 | 3_1:-79807014 | Msa0378940:intron |
| AGTTTATTAGGTTTGATTGT+CGG | 0.475071 | 3_1:+79805459 | None:intergenic |
| GATTTAACTACGTATGAAAC+CGG | 0.475395 | 3_1:+79812018 | None:intergenic |
| TTACTTACCGGGACAGATGC+AGG | 0.477862 | 3_1:+79811819 | None:intergenic |
| CTGTCCAAATTTGGCACCGA+AGG | 0.478848 | 3_1:-79806238 | Msa0378940:CDS |
| CTGTTGATAGATCTATTAAT+GGG | 0.482702 | 3_1:-79806386 | Msa0378940:CDS |
| CCTTCAAGCAGAACATGGGC+TGG | 0.487356 | 3_1:-79810454 | Msa0378940:CDS |
| AAACTTACATAATATTCATA+AGG | 0.492762 | 3_1:+79812239 | None:intergenic |
| CGACTGGATCGCCTTGTCTC+CGG | 0.493010 | 3_1:-79810139 | Msa0378940:CDS |
| TGATGAGTGCGGCCAGTGAC+TGG | 0.494032 | 3_1:+79807016 | None:intergenic |
| TGAGATGTACAGCATGTCAT+TGG | 0.495292 | 3_1:+79806416 | None:intergenic |
| TAAAGAATTGCATACCCCTT+CGG | 0.504219 | 3_1:+79806222 | None:intergenic |
| GCGATGAATTCGAAGTAGTA+TGG | 0.504359 | 3_1:+79812429 | None:intergenic |
| GTTTCGCCCAATCAGGATAT+GGG | 0.504686 | 3_1:+79805524 | None:intergenic |
| AGCTGTGCAGGTTAGCGAGC+AGG | 0.505409 | 3_1:-79805390 | Msa0378940:three_prime_UTR |
| TGAATGCCCATATCCTGATT+GGG | 0.506186 | 3_1:-79805530 | Msa0378940:CDS |
| CCCAGGTTATTTATACGTCA+TGG | 0.509828 | 3_1:-79805427 | Msa0378940:three_prime_UTR |
| TTACATTGTATGCGGTACTC+TGG | 0.510906 | 3_1:-79805568 | Msa0378940:CDS |
| CAAATAAAATACCTCATCCT+CGG | 0.512397 | 3_1:+79809197 | None:intergenic |
| AAATAAAATACCTCATCCTC+GGG | 0.514851 | 3_1:+79809198 | None:intergenic |
| GGCATCCTTCAAGCAGAACA+TGG | 0.516228 | 3_1:-79810459 | Msa0378940:CDS |
| TGTCTCAGCTGTCCATCGAC+TGG | 0.517338 | 3_1:-79810155 | Msa0378940:intron |
| TGGGGAATTTCCCGAGGATG+AGG | 0.518507 | 3_1:-79809208 | Msa0378940:intron |
| CAGGCATGAACCACCTGTGA+TGG | 0.518717 | 3_1:-79811895 | Msa0378940:CDS |
| AATAAACTTGGGTTGATCCC+AGG | 0.521445 | 3_1:-79805444 | Msa0378940:three_prime_UTR |
| TCTGGCTATAATAAGGAGTC+CGG | 0.521448 | 3_1:+79810120 | None:intergenic |
| TCCATGACGTATAAATAACC+TGG | 0.522363 | 3_1:+79805426 | None:intergenic |
| AGTACCATTGCTACTAATCC+GGG | 0.522821 | 3_1:+79807060 | None:intergenic |
| TGGTTGTTACAGATTGAGGC+TGG | 0.531299 | 3_1:-79809264 | Msa0378940:intron |
| TGAGGGAAAAGATCTAATGA+TGG | 0.534383 | 3_1:-79805289 | Msa0378940:three_prime_UTR |
| AGATATGATACTGATGAAGA+AGG | 0.536074 | 3_1:-79805598 | Msa0378940:CDS |
| TTGTAAGCCTGCATCTGTCC+CGG | 0.551212 | 3_1:-79811826 | Msa0378940:intron |
| GGGCATTCATATGTCCATCC+AGG | 0.555137 | 3_1:+79805544 | None:intergenic |
| ATTATTAAGGCTCATTAGAG+AGG | 0.559065 | 3_1:-79805352 | Msa0378940:three_prime_UTR |
| TAGGTTAGTGCGGTGAAATG+TGG | 0.563936 | 3_1:-79812069 | Msa0378940:CDS |
| TGTCCAAATTTGGCACCGAA+GGG | 0.570374 | 3_1:-79806237 | Msa0378940:CDS |
| AGGTCAGAGACTCTACAAAA+GGG | 0.571744 | 3_1:-79807105 | Msa0378940:CDS |
| TGTGGAAGGATTCAAGTTGA+CGG | 0.572120 | 3_1:-79812051 | Msa0378940:CDS |
| CAAGATTACATCGTTCGAAA+CGG | 0.576471 | 3_1:-79812563 | Msa0378940:intron |
| CAATCAAACCTAATAAACTT+GGG | 0.578764 | 3_1:-79805455 | Msa0378940:three_prime_UTR |
| GAGGGAAAAGATCTAATGAT+GGG | 0.578966 | 3_1:-79805288 | Msa0378940:three_prime_UTR |
| TTGCCTCCACAAAATTTACC+CGG | 0.581737 | 3_1:-79807078 | Msa0378940:CDS |
| TGCGGTACTCTGGACCTGGA+TGG | 0.588015 | 3_1:-79805558 | Msa0378940:CDS |
| ATACTGATGAAGAAGGTTTG+TGG | 0.590363 | 3_1:-79805591 | Msa0378940:CDS |
| AGACAAGGCGATCCAGTCGA+TGG | 0.592536 | 3_1:+79810143 | None:intergenic |
| CTTTAGTCCCTGCTATAGTG+AGG | 0.592871 | 3_1:-79805307 | Msa0378940:three_prime_UTR |
| TTTAGTCCCTGCTATAGTGA+GGG | 0.594441 | 3_1:-79805306 | Msa0378940:three_prime_UTR |
| ATAGACTATAATGCTCGAGA+AGG | 0.597554 | 3_1:-79808347 | Msa0378940:CDS |
| TGTATGCGGTACTCTGGACC+TGG | 0.597884 | 3_1:-79805562 | Msa0378940:CDS |
| TAATAAGGAGTCCGGAGACA+AGG | 0.599949 | 3_1:+79810128 | None:intergenic |
| TTTACCCGGATTAGTAGCAA+TGG | 0.600058 | 3_1:-79807064 | Msa0378940:CDS |
| GGAACATCACAAGCCATCAC+AGG | 0.601035 | 3_1:+79811882 | None:intergenic |
| AGAAGGAAGAAGCACAGCAG+AGG | 0.605852 | 3_1:-79808330 | Msa0378940:intron |
| ATATATTGCAAAAGTAGTTG+GGG | 0.609841 | 3_1:-79809226 | Msa0378940:CDS |
| TTAGTGCGGTGAAATGTGGA+AGG | 0.615192 | 3_1:-79812065 | Msa0378940:CDS |
| AGCCAGAAATGCTACAAAAG+CGG | 0.615290 | 3_1:-79810104 | Msa0378940:CDS |
| ATGTAATCTTGCGGTAAAGG+AGG | 0.615710 | 3_1:+79812575 | None:intergenic |
| TATTGTAGATTTATTCGCTG+AGG | 0.616478 | 3_1:-79812276 | Msa0378940:CDS |
| TTTGGACAGTTGGTACACAT+AGG | 0.616779 | 3_1:+79806252 | None:intergenic |
| AGTTGACGGTGAAATCGTGC+CGG | 0.620508 | 3_1:-79812037 | Msa0378940:CDS |
| CAGAGACTCTACAAAAGGGA+AGG | 0.630227 | 3_1:-79807101 | Msa0378940:CDS |
| GTATGGATCTTAGGTTAGTG+CGG | 0.630653 | 3_1:-79812079 | Msa0378940:intron |
| GTTTGTGGTTACATTGTATG+CGG | 0.636819 | 3_1:-79805576 | Msa0378940:CDS |
| GTCCAAATTTGGCACCGAAG+GGG | 0.645456 | 3_1:-79806236 | Msa0378940:intron |
| GCATCCTTCAAGCAGAACAT+GGG | 0.646483 | 3_1:-79810458 | Msa0378940:CDS |
| CCATGACGTATAAATAACCT+GGG | 0.653807 | 3_1:+79805427 | None:intergenic |
| TTCTTGCGATATTGACCACA+TGG | 0.665528 | 3_1:+79810492 | None:intergenic |
| TTGTCAAGAAAATTCCAATG+AGG | 0.670627 | 3_1:-79806289 | Msa0378940:CDS |
| ACATCACAAGCCATCACAGG+TGG | 0.674685 | 3_1:+79811885 | None:intergenic |
| AGTAGTTGGGGAATTTCCCG+AGG | 0.679238 | 3_1:-79809214 | Msa0378940:CDS |
| TTTCGAACGATGTAATCTTG+CGG | 0.684194 | 3_1:+79812566 | None:intergenic |
| AAGAGTGTATGGATATCGTG+TGG | 0.692668 | 3_1:-79812613 | Msa0378940:CDS |
| GGTACATAGGTTCATCCATG+TGG | 0.702272 | 3_1:-79810507 | Msa0378940:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGAGAATTAAAATAAAAAA+TGG | + | chr3_1:79805552-79805571 | None:intergenic | 10.0% |
| !!! | TTTTTGGATATAATATATAT+GGG | + | chr3_1:79808393-79808412 | None:intergenic | 10.0% |
| !!! | ATTTTTGGATATAATATATA+TGG | + | chr3_1:79808394-79808413 | None:intergenic | 10.0% |
| !!! | CTAAAAATAAATGTTTTATA+CGG | + | chr3_1:79810017-79810036 | None:intergenic | 10.0% |
| !! | AAACTTACATAATATTCATA+AGG | + | chr3_1:79805692-79805711 | None:intergenic | 15.0% |
| !! | ATTATTCATATGATAGTTTA+TGG | - | chr3_1:79806250-79806269 | Msa0378940:CDS | 15.0% |
| !! | TAAAATTATAAAACGTAGTT+AGG | + | chr3_1:79806661-79806680 | None:intergenic | 15.0% |
| !! | AGAAAATCCATTAAAATTTA+AGG | + | chr3_1:79807318-79807337 | None:intergenic | 15.0% |
| !!! | TAAATTTTCTGACTAAATAT+AGG | - | chr3_1:79808046-79808065 | Msa0378940:intron | 15.0% |
| !!! | TTTTGGATATAATATATATG+GGG | + | chr3_1:79808392-79808411 | None:intergenic | 15.0% |
| !!! | TACATGATAATCATTATTTT+TGG | + | chr3_1:79808409-79808428 | None:intergenic | 15.0% |
| !! | GTCTTAGATAAAAAAAAAAT+TGG | + | chr3_1:79809408-79809427 | None:intergenic | 15.0% |
| !! | AATATGTGAAAATAAAAAAG+AGG | + | chr3_1:79809734-79809753 | None:intergenic | 15.0% |
| !!! | ACTGTTTTCATTTTATTTTT+AGG | + | chr3_1:79809819-79809838 | None:intergenic | 15.0% |
| !!! | TTATGATATAGGTTATTTTT+AGG | - | chr3_1:79809881-79809900 | Msa0378940:intron | 15.0% |
| !! | TGGATTTAACAATAAATTTA+AGG | - | chr3_1:79810127-79810146 | Msa0378940:CDS | 15.0% |
| !!! | CATAAAGATTTTCATATAAT+AGG | + | chr3_1:79810444-79810463 | None:intergenic | 15.0% |
| !! | AAATTAAATTACAAGATAGA+TGG | - | chr3_1:79810496-79810515 | Msa0378940:CDS | 15.0% |
| !!! | TATAAAAATTTAAAACCTCT+TGG | - | chr3_1:79810585-79810604 | Msa0378940:intron | 15.0% |
| !!! | ATAAAAATTTAAAACCTCTT+GGG | - | chr3_1:79810586-79810605 | Msa0378940:intron | 15.0% |
| !!! | TTGATAATTAAAATTCAAAG+TGG | - | chr3_1:79810741-79810760 | Msa0378940:intron | 15.0% |
| !! | TATTACATATATTCTCTATA+AGG | + | chr3_1:79811321-79811340 | None:intergenic | 15.0% |
| !! | TATATGTAATAAAGATAGAA+TGG | - | chr3_1:79811330-79811349 | Msa0378940:intron | 15.0% |
| !! | AAAGTTAATACAGATTATTT+CGG | - | chr3_1:79811787-79811806 | Msa0378940:intron | 15.0% |
| !!! | TTTTTCATTACCAAAAATTA+GGG | + | chr3_1:79811976-79811995 | None:intergenic | 15.0% |
| !! | AAAAACTTTCTATACAAATA+TGG | - | chr3_1:79811991-79812010 | Msa0378940:CDS | 15.0% |
| !!! | CATATCTACAATTTAAAATT+TGG | + | chr3_1:79812317-79812336 | None:intergenic | 15.0% |
| !!! | ATAAAATCTTGCTATTATTA+AGG | - | chr3_1:79812563-79812582 | Msa0378940:intron | 15.0% |
| !! | CAACAAATTGAAGATTTATA+GGG | + | chr3_1:79805599-79805618 | None:intergenic | 20.0% |
| !! | TCAACAAATTGAAGATTTAT+AGG | + | chr3_1:79805600-79805619 | None:intergenic | 20.0% |
| !!! | TGATAGTCTGAAAAATATTT+TGG | - | chr3_1:79806448-79806467 | Msa0378940:CDS | 20.0% |
| !!! | TTTTTTTCTTATTCTTGTTG+AGG | - | chr3_1:79806707-79806726 | Msa0378940:intron | 20.0% |
| !!! | TTATAACACTGTTTTGTTTT+GGG | - | chr3_1:79807031-79807050 | Msa0378940:CDS | 20.0% |
| !!! | TTCAATTTTTTTTCTTGTAG+TGG | + | chr3_1:79807200-79807219 | None:intergenic | 20.0% |
| !! | AATCATAAGAAATAAGTGTA+AGG | + | chr3_1:79807229-79807248 | None:intergenic | 20.0% |
| !!! | TTACACTTATTTCTTATGAT+TGG | - | chr3_1:79807228-79807247 | Msa0378940:intron | 20.0% |
| !!! | ATGGATTGAAAATGAATTTT+TGG | + | chr3_1:79807516-79807535 | None:intergenic | 20.0% |
| !! | ATGGTGAAATGATTATATAA+TGG | + | chr3_1:79807535-79807554 | None:intergenic | 20.0% |
| !!! | TTGATTTTTCTTTTATATCC+CGG | - | chr3_1:79807709-79807728 | Msa0378940:intron | 20.0% |
| !! | GACTTATGAATTATAATCTT+TGG | - | chr3_1:79808108-79808127 | Msa0378940:intron | 20.0% |
| !!! | TTAAATGTATATTTTTGTCC+CGG | - | chr3_1:79808223-79808242 | Msa0378940:intron | 20.0% |
| !! | AATATATTGCAAAAGTAGTT+GGG | - | chr3_1:79808701-79808720 | Msa0378940:intron | 20.0% |
| !! | TACTAATATCATTTATTTGC+AGG | - | chr3_1:79808772-79808791 | Msa0378940:intron | 20.0% |
| !! | ACTAATATCATTTATTTGCA+GGG | - | chr3_1:79808773-79808792 | Msa0378940:intron | 20.0% |
| !! | ATCAATTATAAATACTTGCA+GGG | + | chr3_1:79808818-79808837 | None:intergenic | 20.0% |
| !! | TATCAATTATAAATACTTGC+AGG | + | chr3_1:79808819-79808838 | None:intergenic | 20.0% |
| !! | ATTAATTATACTGTTATCAG+TGG | + | chr3_1:79809226-79809245 | None:intergenic | 20.0% |
| !! | AAAAAAAAATTGGTTAACCA+GGG | + | chr3_1:79809398-79809417 | None:intergenic | 20.0% |
| !! | AAAAAAAAAATTGGTTAACC+AGG | + | chr3_1:79809399-79809418 | None:intergenic | 20.0% |
| !!! | AATGTTTTCTTAAATCAAAC+AGG | + | chr3_1:79809669-79809688 | None:intergenic | 20.0% |
| !! | TTAGGAATTTGTAATGAAAA+AGG | + | chr3_1:79809801-79809820 | None:intergenic | 20.0% |
| !! | TATTCTTATTATCAGTGAAT+CGG | - | chr3_1:79809846-79809865 | Msa0378940:intron | 20.0% |
| !!! | TCAGTTAAAAAAGTTTTTCA+CGG | + | chr3_1:79809958-79809977 | None:intergenic | 20.0% |
| !!! | ACATTTATTTTTAGTGTGTT+TGG | - | chr3_1:79810023-79810042 | Msa0378940:intron | 20.0% |
| !! | AATGTAAAGTGATTTATGTT+TGG | - | chr3_1:79810087-79810106 | Msa0378940:CDS | 20.0% |
| !!! | AGAATTGATTTTATCATGTT+TGG | + | chr3_1:79810249-79810268 | None:intergenic | 20.0% |
| !! | GTTTATGATCATTTAGATAA+AGG | + | chr3_1:79810328-79810347 | None:intergenic | 20.0% |
| !! | TAAAAGAATGCAACATATAT+TGG | + | chr3_1:79810468-79810487 | None:intergenic | 20.0% |
| !! | ATAATTAAAATTCAAAGTGG+CGG | - | chr3_1:79810744-79810763 | Msa0378940:intron | 20.0% |
| !!! | GAATATATGTTTGATAATGA+AGG | - | chr3_1:79810803-79810822 | Msa0378940:intron | 20.0% |
| !! | AGATATAAAAGATACATGAA+AGG | + | chr3_1:79811073-79811092 | None:intergenic | 20.0% |
| !! | AAGGTTTATTAATGAAACAA+TGG | + | chr3_1:79811302-79811321 | None:intergenic | 20.0% |
| !! | AAGTTAATACAGATTATTTC+GGG | - | chr3_1:79811788-79811807 | Msa0378940:intron | 20.0% |
| !!! | TTTTCATTACCAAAAATTAG+GGG | + | chr3_1:79811975-79811994 | None:intergenic | 20.0% |
| !!! | GTTTTTCATTACCAAAAATT+AGG | + | chr3_1:79811977-79811996 | None:intergenic | 20.0% |
| ! | AGATTTATAGGGTTTAACAA+GGG | + | chr3_1:79805588-79805607 | None:intergenic | 25.0% |
| ! | AAGATTTATAGGGTTTAACA+AGG | + | chr3_1:79805589-79805608 | None:intergenic | 25.0% |
| ! | TTTCAAACCTGTGTAAAAAA+TGG | + | chr3_1:79805951-79805970 | None:intergenic | 25.0% |
| ! | ACTTATTAAACTTACTTACC+GGG | + | chr3_1:79806123-79806142 | None:intergenic | 25.0% |
| ! | CACTTATTAAACTTACTTAC+CGG | + | chr3_1:79806124-79806143 | None:intergenic | 25.0% |
| !!! | TGTATGTGTTTTAGTTACAT+GGG | + | chr3_1:79806160-79806179 | None:intergenic | 25.0% |
| ! | ATGTAACTAAAACACATACA+GGG | - | chr3_1:79806160-79806179 | Msa0378940:intron | 25.0% |
| ! | AAAAAATAAGCCAATCCAAA+CGG | + | chr3_1:79806187-79806206 | None:intergenic | 25.0% |
| ! | GGAAATTATAGTGTAATCAT+TGG | + | chr3_1:79806548-79806567 | None:intergenic | 25.0% |
| !! | TCTTCAATTTGAAATGCATT+TGG | - | chr3_1:79806624-79806643 | Msa0378940:intron | 25.0% |
| !! | TTTTACGTGAATATCTGATT+AGG | - | chr3_1:79806733-79806752 | Msa0378940:intron | 25.0% |
| !!! | CTTATAACACTGTTTTGTTT+TGG | - | chr3_1:79807030-79807049 | Msa0378940:CDS | 25.0% |
| ! | ATAAGAAATAAGTGTAAGGA+TGG | + | chr3_1:79807225-79807244 | None:intergenic | 25.0% |
| !! | TCGAAGTCCTTAAATTTTAA+TGG | - | chr3_1:79807308-79807327 | Msa0378940:intron | 25.0% |
| !! | ATTTTCTATTAGTTGCCTAA+GGG | - | chr3_1:79807331-79807350 | Msa0378940:intron | 25.0% |
| ! | ATAATCATTTCACCATAAAG+AGG | - | chr3_1:79807539-79807558 | Msa0378940:intron | 25.0% |
| ! | TTATATGATACACCTCTTTA+TGG | + | chr3_1:79807554-79807573 | None:intergenic | 25.0% |
| ! | AGGTGTATCATATAATGATA+AGG | - | chr3_1:79807559-79807578 | Msa0378940:intron | 25.0% |
| ! | GGGAAAATGAAAGTAAAAAT+TGG | + | chr3_1:79807660-79807679 | None:intergenic | 25.0% |
| ! | AAGAAAAATCAAGTACAGAA+TGG | + | chr3_1:79807701-79807720 | None:intergenic | 25.0% |
| !! | ACTTTTGTAAAACTAGATTC+CGG | + | chr3_1:79808245-79808264 | None:intergenic | 25.0% |
| !!! | ATGGAATCTAGTTTTTCAAA+TGG | - | chr3_1:79808314-79808333 | Msa0378940:intron | 25.0% |
| ! | AAATTCTACAGTTATAATGG+AGG | + | chr3_1:79808645-79808664 | None:intergenic | 25.0% |
| ! | TCCATTATAACTGTAGAATT+TGG | - | chr3_1:79808644-79808663 | Msa0378940:intron | 25.0% |
| ! | ACCAAATTCTACAGTTATAA+TGG | + | chr3_1:79808648-79808667 | None:intergenic | 25.0% |
| ! | CAATATATTGCAAAAGTAGT+TGG | - | chr3_1:79808700-79808719 | Msa0378940:intron | 25.0% |
| ! | ATATATTGCAAAAGTAGTTG+GGG | - | chr3_1:79808702-79808721 | Msa0378940:intron | 25.0% |
| !! | TACTTCAATAATCCTTTTTC+TGG | - | chr3_1:79808911-79808930 | Msa0378940:intron | 25.0% |
| !!! | TGTCATTTAGACTATCATTT+TGG | - | chr3_1:79808984-79809003 | Msa0378940:intron | 25.0% |
| !! | GTCATTTAGACTATCATTTT+GGG | - | chr3_1:79808985-79809004 | Msa0378940:intron | 25.0% |
| ! | GCATAAATAACTCAATTATG+AGG | - | chr3_1:79809036-79809055 | Msa0378940:intron | 25.0% |
| ! | TTTGTGTTTGAAAAAGCAAT+AGG | - | chr3_1:79809145-79809164 | Msa0378940:intron | 25.0% |
| ! | TAATATTGCCATAATGAGAA+CGG | - | chr3_1:79809261-79809280 | Msa0378940:intron | 25.0% |
| !!! | AATAGTATCTCAATTTTGAC+TGG | + | chr3_1:79809514-79809533 | None:intergenic | 25.0% |
| ! | ATGAAACAATATAGAACCAA+AGG | + | chr3_1:79809629-79809648 | None:intergenic | 25.0% |
| !!! | TTTGGTTCTATATTGTTTCA+TGG | - | chr3_1:79809628-79809647 | Msa0378940:intron | 25.0% |
| ! | TTTCATGGTAGAAAAATCTA+GGG | - | chr3_1:79809643-79809662 | Msa0378940:intron | 25.0% |
| ! | TCACATATTTGTACATGAAA+TGG | - | chr3_1:79809745-79809764 | Msa0378940:intron | 25.0% |
| !!! | AAGAACTGCTTTTATGATAT+AGG | - | chr3_1:79809870-79809889 | Msa0378940:intron | 25.0% |
| ! | TGGATGTATTTATGTAAATG+TGG | - | chr3_1:79810107-79810126 | Msa0378940:CDS | 25.0% |
| !! | TGTATGTTTGGATTCAATTT+TGG | + | chr3_1:79810300-79810319 | None:intergenic | 25.0% |
| !!! | TCTAACAATTTTTGAAGGAA+AGG | + | chr3_1:79810374-79810393 | None:intergenic | 25.0% |
| !! | AGGTATCTAACAATTTTTGA+AGG | + | chr3_1:79810379-79810398 | None:intergenic | 25.0% |
| ! | TGGTAAAAACTAATCATTGT+TGG | - | chr3_1:79810692-79810711 | Msa0378940:intron | 25.0% |
| ! | TCATCAGGTAAAAAAATTGT+TGG | - | chr3_1:79810929-79810948 | Msa0378940:intron | 25.0% |
| ! | ACCTAATACTATGCAAATAT+CGG | - | chr3_1:79811424-79811443 | Msa0378940:intron | 25.0% |
| !! | ACTGTTGATAGATCTATTAA+TGG | - | chr3_1:79811541-79811560 | Msa0378940:intron | 25.0% |
| !! | CTGTTGATAGATCTATTAAT+GGG | - | chr3_1:79811542-79811561 | Msa0378940:intron | 25.0% |
| !! | GAATTTTCTTGACAATCTTT+GGG | + | chr3_1:79811634-79811653 | None:intergenic | 25.0% |
| ! | TCATTATACTATAGACAGTT+AGG | + | chr3_1:79811826-79811845 | None:intergenic | 25.0% |
| ! | TGTCTATAGTATAATGATGT+TGG | - | chr3_1:79811829-79811848 | Msa0378940:CDS | 25.0% |
| ! | AGAGACTTTCAACATTTATT+TGG | + | chr3_1:79812042-79812061 | None:intergenic | 25.0% |
| ! | AAATAAATGTTGAAAGTCTC+TGG | - | chr3_1:79812041-79812060 | Msa0378940:CDS | 25.0% |
| ! | TTTAACTAAATGTCTTGGAA+AGG | + | chr3_1:79812080-79812099 | None:intergenic | 25.0% |
| ! | AAAACTGAAAAACAGAGAAA+AGG | + | chr3_1:79812121-79812140 | None:intergenic | 25.0% |
| ! | CTGAGGTTAAAAAAATACAA+TGG | + | chr3_1:79812268-79812287 | None:intergenic | 25.0% |
| ! | AGTTTATTAGGTTTGATTGT+CGG | + | chr3_1:79812472-79812491 | None:intergenic | 25.0% |
| ! | ACAATCAAACCTAATAAACT+TGG | - | chr3_1:79812472-79812491 | Msa0378940:intron | 25.0% |
| ! | CAATCAAACCTAATAAACTT+GGG | - | chr3_1:79812473-79812492 | Msa0378940:intron | 25.0% |
| !! | TCGTTTTTCGCAATATTTCT+TGG | - | chr3_1:79805245-79805264 | Msa0378940:three_prime_UTR | 30.0% |
| ! | TTCGAAGTTGTTATTGGAAT+TGG | + | chr3_1:79805423-79805442 | None:intergenic | 30.0% |
| TTCGATTTCGAAGTTGTTAT+TGG | + | chr3_1:79805429-79805448 | None:intergenic | 30.0% | |
| AAATTCTTCTTATATCGTGC+AGG | - | chr3_1:79805460-79805479 | Msa0378940:three_prime_UTR | 30.0% | |
| !! | ATCTTCAATTTGTTGATGCT+AGG | - | chr3_1:79805604-79805623 | Msa0378940:intron | 30.0% |
| ATGCTAGGTTAAAAATCGAT+GGG | - | chr3_1:79805619-79805638 | Msa0378940:intron | 30.0% | |
| TATTGTAGATTTATTCGCTG+AGG | - | chr3_1:79805652-79805671 | Msa0378940:intron | 30.0% | |
| TTATTCGCTGAGGAATTTAA+AGG | - | chr3_1:79805662-79805681 | Msa0378940:intron | 30.0% | |
| TGATTGTTTGTATGGATCTT+AGG | - | chr3_1:79805840-79805859 | Msa0378940:intron | 30.0% | |
| GATTTAACTACGTATGAAAC+CGG | + | chr3_1:79805913-79805932 | None:intergenic | 30.0% | |
| !!! | AGATAAGCCATTTTTTACAC+AGG | - | chr3_1:79805941-79805960 | Msa0378940:intron | 30.0% |
| ! | CATTTGATGCTTTTCTTCAT+AGG | - | chr3_1:79805974-79805993 | Msa0378940:intron | 30.0% |
| CGGTAAGTAAGTTTAATAAG+TGG | - | chr3_1:79806122-79806141 | Msa0378940:intron | 30.0% | |
| !!! | CTGTATGTGTTTTAGTTACA+TGG | + | chr3_1:79806161-79806180 | None:intergenic | 30.0% |
| CATGTAACTAAAACACATAC+AGG | - | chr3_1:79806159-79806178 | Msa0378940:intron | 30.0% | |
| AAAAATAAGCCAATCCAAAC+GGG | + | chr3_1:79806186-79806205 | None:intergenic | 30.0% | |
| AGTAAAGAAATTGTGAGAAG+AGG | + | chr3_1:79806421-79806440 | None:intergenic | 30.0% | |
| GAAATAGCTGTCTAAATTGT+CGG | + | chr3_1:79806572-79806591 | None:intergenic | 30.0% | |
| AATTCAAAACACGTAACGAT+TGG | + | chr3_1:79806594-79806613 | None:intergenic | 30.0% | |
| CTTAACTTTGTATTTGCAAG+AGG | + | chr3_1:79806787-79806806 | None:intergenic | 30.0% | |
| CTCTTGCAAATACAAAGTTA+AGG | - | chr3_1:79806785-79806804 | Msa0378940:intron | 30.0% | |
| ! | TTTGTTGCATAGTATTGAGA+AGG | - | chr3_1:79806875-79806894 | Msa0378940:intron | 30.0% |
| CCAAATATTTGTCTTACAGA+CGG | + | chr3_1:79806973-79806992 | None:intergenic | 30.0% | |
| ! | AGAGTTTGCATCAATCATTT+TGG | - | chr3_1:79807114-79807133 | Msa0378940:intron | 30.0% |
| AATTTAAGGACTTCGATTAC+CGG | + | chr3_1:79807304-79807323 | None:intergenic | 30.0% | |
| ! | GATTTTCTATTAGTTGCCTA+AGG | - | chr3_1:79807330-79807349 | Msa0378940:intron | 30.0% |
| !! | AATTTTTGGATACGAAACAG+AGG | + | chr3_1:79807502-79807521 | None:intergenic | 30.0% |
| ATAAGTATGCAAAATGTGCA+CGG | + | chr3_1:79807621-79807640 | None:intergenic | 30.0% | |
| !! | TAGCATTTCTGGCTATAATA+AGG | + | chr3_1:79807818-79807837 | None:intergenic | 30.0% |
| ! | TTTTAGACAAGAGGTAAGTT+TGG | - | chr3_1:79807851-79807870 | Msa0378940:intron | 30.0% |
| TTTAGACAAGAGGTAAGTTT+GGG | - | chr3_1:79807852-79807871 | Msa0378940:intron | 30.0% | |
| TAGCAAATTATGCTTGAAAC+TGG | - | chr3_1:79808170-79808189 | Msa0378940:intron | 30.0% | |
| ! | CTTTTGTAAAACTAGATTCC+GGG | + | chr3_1:79808244-79808263 | None:intergenic | 30.0% |
| !!! | TCTAGTTTTTCAAATGGTTC+TGG | - | chr3_1:79808320-79808339 | Msa0378940:intron | 30.0% |
| TAAACTCAATTGACCATTGT+TGG | - | chr3_1:79808427-79808446 | Msa0378940:intron | 30.0% | |
| GCTATTGGTAAGATTTGTAT+TGG | - | chr3_1:79808492-79808511 | Msa0378940:intron | 30.0% | |
| AATTTGGTTGTTACAGATTG+AGG | - | chr3_1:79808660-79808679 | Msa0378940:intron | 30.0% | |
| AAATAAAATACCTCATCCTC+GGG | + | chr3_1:79808733-79808752 | None:intergenic | 30.0% | |
| CAAATAAAATACCTCATCCT+CGG | + | chr3_1:79808734-79808753 | None:intergenic | 30.0% | |
| TAACATAGTATAGCATCATC+AGG | - | chr3_1:79808875-79808894 | Msa0378940:intron | 30.0% | |
| CTTAATGATACTCCAGAAAA+AGG | + | chr3_1:79808926-79808945 | None:intergenic | 30.0% | |
| !!! | CTTTTTCTGGAGTATCATTA+AGG | - | chr3_1:79808924-79808943 | Msa0378940:intron | 30.0% |
| ATAACTCAATTATGAGGCTT+TGG | - | chr3_1:79809042-79809061 | Msa0378940:intron | 30.0% | |
| !! | TTAAGAGAGATTTTGACAGA+TGG | - | chr3_1:79809083-79809102 | Msa0378940:intron | 30.0% |
| TGTTTGAAAAAGCAATAGGA+TGG | - | chr3_1:79809149-79809168 | Msa0378940:intron | 30.0% | |
| GTTTGAAAAAGCAATAGGAT+GGG | - | chr3_1:79809150-79809169 | Msa0378940:intron | 30.0% | |
| TAAAACCTTCAAACAGTACT+TGG | - | chr3_1:79809295-79809314 | Msa0378940:intron | 30.0% | |
| CTTCAAAGAACTTTCATTTC+CGG | - | chr3_1:79809447-79809466 | Msa0378940:intron | 30.0% | |
| TTCAAAGAACTTTCATTTCC+GGG | - | chr3_1:79809448-79809467 | Msa0378940:intron | 30.0% | |
| TCGAGCATTATAGTCTATAT+TGG | + | chr3_1:79809579-79809598 | None:intergenic | 30.0% | |
| GTTTCATGGTAGAAAAATCT+AGG | - | chr3_1:79809642-79809661 | Msa0378940:intron | 30.0% | |
| ! | GCGGTGATATAAATTGTTTT+TGG | - | chr3_1:79810050-79810069 | Msa0378940:intron | 30.0% |
| ! | GTGATCAAAATTGATTCTAG+AGG | + | chr3_1:79810276-79810295 | None:intergenic | 30.0% |
| ATAAAGGTCAAGTGTATGTT+TGG | + | chr3_1:79810312-79810331 | None:intergenic | 30.0% | |
| CTGGTGATCAAAATCTTAAA+AGG | + | chr3_1:79810399-79810418 | None:intergenic | 30.0% | |
| ATCCTTAAAGACTCAATTGA+TGG | + | chr3_1:79810620-79810639 | None:intergenic | 30.0% | |
| GATAGTTCAGAAAACAACAT+GGG | - | chr3_1:79810637-79810656 | Msa0378940:intron | 30.0% | |
| ! | TATTGGTTATTATGACGTTC+TGG | - | chr3_1:79810672-79810691 | Msa0378940:intron | 30.0% |
| !!! | ATTTTTTTACCTGATGAGTG+CGG | + | chr3_1:79810926-79810945 | None:intergenic | 30.0% |
| TCAGGTAAAAAAATTGTTGG+CGG | - | chr3_1:79810932-79810951 | Msa0378940:intron | 30.0% | |
| GCTAAATATATCCATGCAAA+TGG | + | chr3_1:79811168-79811187 | None:intergenic | 30.0% | |
| CATATATGTGTATATACGCT+GGG | + | chr3_1:79811275-79811294 | None:intergenic | 30.0% | |
| GTTTAAATAAGATGAAGTGC+AGG | + | chr3_1:79811406-79811425 | None:intergenic | 30.0% | |
| TCCGATATTTGCATAGTATT+AGG | + | chr3_1:79811428-79811447 | None:intergenic | 30.0% | |
| GCTTCTTTGACATCAAATTT+CGG | - | chr3_1:79811598-79811617 | Msa0378940:intron | 30.0% | |
| ! | GGAATTTTCTTGACAATCTT+TGG | + | chr3_1:79811635-79811654 | None:intergenic | 30.0% |
| TTGTCAAGAAAATTCCAATG+AGG | - | chr3_1:79811639-79811658 | Msa0378940:intron | 30.0% | |
| ! | TATAATGATGTTGGTTGTGA+GGG | - | chr3_1:79811838-79811857 | Msa0378940:CDS | 30.0% |
| ! | TAATGTAAGCATTGTATCAG+AGG | + | chr3_1:79811927-79811946 | None:intergenic | 30.0% |
| ACATTTATTTGGATCAACAG+TGG | + | chr3_1:79812031-79812050 | None:intergenic | 30.0% | |
| TGTGGTTTAACTAAATGTCT+TGG | + | chr3_1:79812085-79812104 | None:intergenic | 30.0% | |
| AAAGGAAAATCATTAACGTG+TGG | + | chr3_1:79812103-79812122 | None:intergenic | 30.0% | |
| GGATTACAAGATTAAGTTAC+TGG | + | chr3_1:79812218-79812237 | None:intergenic | 30.0% | |
| AACTTAATCTTGTAATCCAG+TGG | - | chr3_1:79812220-79812239 | Msa0378940:intron | 30.0% | |
| AGATATGATACTGATGAAGA+AGG | - | chr3_1:79812330-79812349 | Msa0378940:intron | 30.0% | |
| ATTATTAAGGCTCATTAGAG+AGG | - | chr3_1:79812576-79812595 | Msa0378940:CDS | 30.0% | |
| ACTTGCACTAATGAAGTATA+TGG | + | chr3_1:79812687-79812706 | None:intergenic | 30.0% | |
| AGTGCAAGTTTACTCAATTT+CGG | - | chr3_1:79812698-79812717 | Msa0378940:five_prime_UTR | 30.0% | |
| TTTCGAACGATGTAATCTTG+CGG | + | chr3_1:79805365-79805384 | None:intergenic | 35.0% | |
| CAAGATTACATCGTTCGAAA+CGG | - | chr3_1:79805365-79805384 | Msa0378940:three_prime_UTR | 35.0% | |
| GTTATTGGAATTGGAATGTG+TGG | + | chr3_1:79805414-79805433 | None:intergenic | 35.0% | |
| GATGCTAGGTTAAAAATCGA+TGG | - | chr3_1:79805618-79805637 | Msa0378940:intron | 35.0% | |
| ! | CGGTTAGTTGATTGTTTGTA+TGG | - | chr3_1:79805832-79805851 | Msa0378940:intron | 35.0% |
| !! | ATTTGTGACTGATGCTGTTT+TGG | - | chr3_1:79806007-79806026 | Msa0378940:intron | 35.0% |
| !! | TCTGGTTCTGTATGAAGAAT+AGG | + | chr3_1:79806070-79806089 | None:intergenic | 35.0% |
| TTACAAACAGTTAGCACATC+TGG | + | chr3_1:79806088-79806107 | None:intergenic | 35.0% | |
| AAAAATAAGCCAGTCCAAGT+AGG | - | chr3_1:79806367-79806386 | Msa0378940:CDS | 35.0% | |
| CTGATTCTCTCTATTACTAC+GGG | + | chr3_1:79806393-79806412 | None:intergenic | 35.0% | |
| ! | GCTGATTCTCTCTATTACTA+CGG | + | chr3_1:79806394-79806413 | None:intergenic | 35.0% |
| TACGTGAATATCTGATTAGG+AGG | - | chr3_1:79806736-79806755 | Msa0378940:intron | 35.0% | |
| GATTTAACAGCTCAAACCTA+TGG | + | chr3_1:79806762-79806781 | None:intergenic | 35.0% | |
| CAAATGCTATAAAGTCCTCA+TGG | + | chr3_1:79806859-79806878 | None:intergenic | 35.0% | |
| CCGTCTGTAAGACAAATATT+TGG | - | chr3_1:79806970-79806989 | Msa0378940:intron | 35.0% | |
| ! | TTTCCAGCTACTTTAAACGT+TGG | - | chr3_1:79807054-79807073 | Msa0378940:CDS | 35.0% |
| GATGCTTTGCAATACTTTGT+AGG | - | chr3_1:79807270-79807289 | Msa0378940:intron | 35.0% | |
| TACTTTGTAGGCCTTTATTC+CGG | - | chr3_1:79807282-79807301 | Msa0378940:intron | 35.0% | |
| !! | CTAAAGCTGTGAATTTTAGC+TGG | - | chr3_1:79807400-79807419 | Msa0378940:intron | 35.0% |
| !!! | GTGAATTTTAGCTGGTACAT+AGG | - | chr3_1:79807408-79807427 | Msa0378940:intron | 35.0% |
| TAAGTATGCAAAATGTGCAC+GGG | + | chr3_1:79807620-79807639 | None:intergenic | 35.0% | |
| ! | GGTAAACTCTGAGAGATTAA+GGG | + | chr3_1:79807680-79807699 | None:intergenic | 35.0% |
| ! | TGGTAAACTCTGAGAGATTA+AGG | + | chr3_1:79807681-79807700 | None:intergenic | 35.0% |
| TACGAAAATCGATAAAGTCC+GGG | + | chr3_1:79807730-79807749 | None:intergenic | 35.0% | |
| GTACGAAAATCGATAAAGTC+CGG | + | chr3_1:79807731-79807750 | None:intergenic | 35.0% | |
| TCGTATAAATTCCAGACATG+AGG | - | chr3_1:79808280-79808299 | Msa0378940:intron | 35.0% | |
| ACATGAGGACAAAAGGTTAA+TGG | - | chr3_1:79808295-79808314 | Msa0378940:intron | 35.0% | |
| !!! | TTTTCAAATGGTTCTGGTTG+AGG | - | chr3_1:79808326-79808345 | Msa0378940:intron | 35.0% |
| TTGTTAATTGCAGCCAACAA+TGG | + | chr3_1:79808443-79808462 | None:intergenic | 35.0% | |
| AGCTGCATATACAAAGCTAT+TGG | - | chr3_1:79808477-79808496 | Msa0378940:intron | 35.0% | |
| ! | TACAGTTATAATGGAGGTGT+AGG | + | chr3_1:79808639-79808658 | None:intergenic | 35.0% |
| !! | CGAGGATGAGGTATTTTATT+TGG | - | chr3_1:79808732-79808751 | Msa0378940:intron | 35.0% |
| !! | TGAGGTATTTTATTTGGCCT+CGG | - | chr3_1:79808738-79808757 | Msa0378940:intron | 35.0% |
| TTAGTATAGTAACTCATCCG+AGG | + | chr3_1:79808758-79808777 | None:intergenic | 35.0% | |
| CTAAAAGAGATAACCTTGGT+TGG | - | chr3_1:79809009-79809028 | Msa0378940:intron | 35.0% | |
| TATTTATGCATCTCCAACCA+AGG | + | chr3_1:79809025-79809044 | None:intergenic | 35.0% | |
| GCTTTGGTTGCATTCTTTAT+GGG | - | chr3_1:79809058-79809077 | Msa0378940:intron | 35.0% | |
| CTTTGGTTGCATTCTTTATG+GGG | - | chr3_1:79809059-79809078 | Msa0378940:intron | 35.0% | |
| TTGACAGATGGTGAATAAGA+TGG | - | chr3_1:79809095-79809114 | Msa0378940:intron | 35.0% | |
| TTCAACAACCGTTCTCATTA+TGG | + | chr3_1:79809272-79809291 | None:intergenic | 35.0% | |
| ! | TCAAACCAAGTACTGTTTGA+AGG | + | chr3_1:79809303-79809322 | None:intergenic | 35.0% |
| ! | AAGAAGTGTGCACATATTGT+TGG | - | chr3_1:79809328-79809347 | Msa0378940:intron | 35.0% |
| ! | AGAAGTGTGCACATATTGTT+GGG | - | chr3_1:79809329-79809348 | Msa0378940:intron | 35.0% |
| AGTAACAACTAAACATACCC+TGG | - | chr3_1:79809378-79809397 | Msa0378940:intron | 35.0% | |
| GGCATCAACAATTATCTGAA+AGG | + | chr3_1:79809558-79809577 | None:intergenic | 35.0% | |
| ATAGACTATAATGCTCGAGA+AGG | - | chr3_1:79809581-79809600 | Msa0378940:intron | 35.0% | |
| !!! | TTTTAGTGTGTTTGGTTCTG+CGG | - | chr3_1:79810031-79810050 | Msa0378940:intron | 35.0% |
| AATGCTGATATCAAGCCAAA+AGG | - | chr3_1:79810528-79810547 | Msa0378940:intron | 35.0% | |
| !! | TAAAGACTCAATTGATGGTG+AGG | + | chr3_1:79810615-79810634 | None:intergenic | 35.0% |
| CACCATCAATTGAGTCTTTA+AGG | - | chr3_1:79810615-79810634 | Msa0378940:intron | 35.0% | |
| GGATAGTTCAGAAAACAACA+TGG | - | chr3_1:79810636-79810655 | Msa0378940:intron | 35.0% | |
| ! | ACTAATCCGGGTAAATTTTG+TGG | + | chr3_1:79810859-79810878 | None:intergenic | 35.0% |
| TCAAATAAGCAGCTTAAGTC+TGG | + | chr3_1:79810978-79810997 | None:intergenic | 35.0% | |
| TGCTAAAAAGATCGACACTA+CGG | + | chr3_1:79811037-79811056 | None:intergenic | 35.0% | |
| TTCCAACCAAAAAACATTGC+TGG | - | chr3_1:79811110-79811129 | Msa0378940:intron | 35.0% | |
| !!! | TACCAGCAATGTTTTTTGGT+TGG | + | chr3_1:79811115-79811134 | None:intergenic | 35.0% |
| !!! | AAGGTACCAGCAATGTTTTT+TGG | + | chr3_1:79811119-79811138 | None:intergenic | 35.0% |
| GCATATATGTGTATATACGC+TGG | + | chr3_1:79811276-79811295 | None:intergenic | 35.0% | |
| ! | CTTCACATTTTCAACTGCTT+CGG | + | chr3_1:79811362-79811381 | None:intergenic | 35.0% |
| ATCAATGCTAAACTCCTCAT+TGG | + | chr3_1:79811656-79811675 | None:intergenic | 35.0% | |
| TAAAGAATTGCATACCCCTT+CGG | + | chr3_1:79811709-79811728 | None:intergenic | 35.0% | |
| TACTATAGACAGTTAGGCAT+AGG | + | chr3_1:79811820-79811839 | None:intergenic | 35.0% | |
| ! | GTATAATGATGTTGGTTGTG+AGG | - | chr3_1:79811837-79811856 | Msa0378940:CDS | 35.0% |
| !!! | TGAGGGTAGATTTTTAGTTG+TGG | - | chr3_1:79811855-79811874 | Msa0378940:CDS | 35.0% |
| GACTAGTGACATAACAATGA+GGG | + | chr3_1:79811886-79811905 | None:intergenic | 35.0% | |
| ! | CAAAAATTAGGGGTGTACAT+GGG | + | chr3_1:79811965-79811984 | None:intergenic | 35.0% |
| ! | TAAGCTTACATGTGACTTGT+TGG | - | chr3_1:79812173-79812192 | Msa0378940:intron | 35.0% |
| AAAATACAATGGTGTTCGTG+AGG | + | chr3_1:79812257-79812276 | None:intergenic | 35.0% | |
| TTTAGTGATAGATCTGTCTG+AGG | + | chr3_1:79812285-79812304 | None:intergenic | 35.0% | |
| ATACTGATGAAGAAGGTTTG+TGG | - | chr3_1:79812337-79812356 | Msa0378940:intron | 35.0% | |
| GTTTGTGGTTACATTGTATG+CGG | - | chr3_1:79812352-79812371 | Msa0378940:intron | 35.0% | |
| CCATGACGTATAAATAACCT+GGG | + | chr3_1:79812504-79812523 | None:intergenic | 35.0% | |
| TCCATGACGTATAAATAACC+TGG | + | chr3_1:79812505-79812524 | None:intergenic | 35.0% | |
| TGAGGGAAAAGATCTAATGA+TGG | - | chr3_1:79812639-79812658 | Msa0378940:exon | 35.0% | |
| GAGGGAAAAGATCTAATGAT+GGG | - | chr3_1:79812640-79812659 | Msa0378940:exon | 35.0% | |
| ! | GAGAGAAGAGAAAGAGTGTA+TGG | - | chr3_1:79805304-79805323 | Msa0378940:three_prime_UTR | 40.0% |
| ! | AAGAGTGTATGGATATCGTG+TGG | - | chr3_1:79805315-79805334 | Msa0378940:three_prime_UTR | 40.0% |
| ATGTAATCTTGCGGTAAAGG+AGG | + | chr3_1:79805356-79805375 | None:intergenic | 40.0% | |
| ACGATGTAATCTTGCGGTAA+AGG | + | chr3_1:79805359-79805378 | None:intergenic | 40.0% | |
| GCGATGAATTCGAAGTAGTA+TGG | + | chr3_1:79805502-79805521 | None:intergenic | 40.0% | |
| CTAGGTTAAAAATCGATGGG+CGG | - | chr3_1:79805622-79805641 | Msa0378940:intron | 40.0% | |
| TAGGTTAAAAATCGATGGGC+GGG | - | chr3_1:79805623-79805642 | Msa0378940:intron | 40.0% | |
| GTATGGATCTTAGGTTAGTG+CGG | - | chr3_1:79805849-79805868 | Msa0378940:intron | 40.0% | |
| !! | TGTGGAAGGATTCAAGTTGA+CGG | - | chr3_1:79805877-79805896 | Msa0378940:intron | 40.0% |
| !!! | ACTGATGCTGTTTTGGTTTC+AGG | - | chr3_1:79806014-79806033 | Msa0378940:intron | 40.0% |
| ATAGCTGTCTAAATTGTCGG+TGG | + | chr3_1:79806569-79806588 | None:intergenic | 40.0% | |
| ATATCTGATTAGGAGGCCAT+AGG | - | chr3_1:79806743-79806762 | Msa0378940:intron | 40.0% | |
| ! | GTGTTATAAGTGCTGCTGAA+TGG | + | chr3_1:79807020-79807039 | None:intergenic | 40.0% |
| ! | TTGCCAACGTTTAAAGTAGC+TGG | + | chr3_1:79807060-79807079 | None:intergenic | 40.0% |
| GACTTCGATTACCGGAATAA+AGG | + | chr3_1:79807296-79807315 | None:intergenic | 40.0% | |
| TTCTTGCGATATTGACCACA+TGG | + | chr3_1:79807439-79807458 | None:intergenic | 40.0% | |
| TATCGCAAGAACACTGTTGT+TGG | - | chr3_1:79807448-79807467 | Msa0378940:intron | 40.0% | |
| TCTGGCTATAATAAGGAGTC+CGG | + | chr3_1:79807811-79807830 | None:intergenic | 40.0% | |
| AGCCAGAAATGCTACAAAAG+CGG | - | chr3_1:79807824-79807843 | Msa0378940:intron | 40.0% | |
| ATTCCAGACATGAGGACAAA+AGG | - | chr3_1:79808288-79808307 | Msa0378940:intron | 40.0% | |
| ! | TAACCTTTTGTCCTCATGTC+TGG | + | chr3_1:79808294-79808313 | None:intergenic | 40.0% |
| !! | GGAGGTGTAGGAAAAAGTTT+TGG | + | chr3_1:79808627-79808646 | None:intergenic | 40.0% |
| GGGTCTAAAAGAGATAACCT+TGG | - | chr3_1:79809005-79809024 | Msa0378940:intron | 40.0% | |
| ! | GGCTTTGGTTGCATTCTTTA+TGG | - | chr3_1:79809057-79809076 | Msa0378940:intron | 40.0% |
| GCAGGTGTTTATTGTCACAT+TGG | - | chr3_1:79809178-79809197 | Msa0378940:intron | 40.0% | |
| TTGCTAAATTCAACACAGCC+CGG | + | chr3_1:79809469-79809488 | None:intergenic | 40.0% | |
| ! | GAGAGTGTGAAACTCTATAC+TGG | + | chr3_1:79810418-79810437 | None:intergenic | 40.0% |
| TCAGAAAACAACATGGGTGT+TGG | - | chr3_1:79810643-79810662 | Msa0378940:intron | 40.0% | |
| !! | ATGGGTGTTGGCTATTGTAT+TGG | - | chr3_1:79810655-79810674 | Msa0378940:intron | 40.0% |
| TAAAATTCAAAGTGGCGGCA+AGG | - | chr3_1:79810749-79810768 | Msa0378940:intron | 40.0% | |
| AAGGTCAGAGACTCTACAAA+AGG | - | chr3_1:79810822-79810841 | Msa0378940:intron | 40.0% | |
| AGGTCAGAGACTCTACAAAA+GGG | - | chr3_1:79810823-79810842 | Msa0378940:intron | 40.0% | |
| TTGCCTCCACAAAATTTACC+CGG | - | chr3_1:79810850-79810869 | Msa0378940:intron | 40.0% | |
| ! | AATCCGGGTAAATTTTGTGG+AGG | + | chr3_1:79810856-79810875 | None:intergenic | 40.0% |
| !! | TTTACCCGGATTAGTAGCAA+TGG | - | chr3_1:79810864-79810883 | Msa0378940:intron | 40.0% |
| AGTACCATTGCTACTAATCC+GGG | + | chr3_1:79810871-79810890 | None:intergenic | 40.0% | |
| GAGTACCATTGCTACTAATC+CGG | + | chr3_1:79810872-79810891 | None:intergenic | 40.0% | |
| AAACATTGCTGGTACCTTCA+AGG | - | chr3_1:79811121-79811140 | Msa0378940:intron | 40.0% | |
| AACATTGCTGGTACCTTCAA+GGG | - | chr3_1:79811122-79811141 | Msa0378940:intron | 40.0% | |
| CTGACAACACATTCCTGATT+AGG | - | chr3_1:79811222-79811241 | Msa0378940:intron | 40.0% | |
| TTGAAGCATGTGACCTAATC+AGG | + | chr3_1:79811238-79811257 | None:intergenic | 40.0% | |
| TGAACGCGTATCTACACAAA+AGG | + | chr3_1:79811466-79811485 | None:intergenic | 40.0% | |
| ! | ACAGCATGTCATTGGCTATT+GGG | + | chr3_1:79811507-79811526 | None:intergenic | 40.0% |
| ! | TACAGCATGTCATTGGCTAT+TGG | + | chr3_1:79811508-79811527 | None:intergenic | 40.0% |
| TGAGATGTACAGCATGTCAT+TGG | + | chr3_1:79811515-79811534 | None:intergenic | 40.0% | |
| ! | TTTGGACAGTTGGTACACAT+AGG | + | chr3_1:79811679-79811698 | None:intergenic | 40.0% |
| GTGTACCAACTGTCCAAATT+TGG | - | chr3_1:79811681-79811700 | Msa0378940:intron | 40.0% | |
| CGACTAGTGACATAACAATG+AGG | + | chr3_1:79811887-79811906 | None:intergenic | 40.0% | |
| ! | CCAAAAATTAGGGGTGTACA+TGG | + | chr3_1:79811966-79811985 | None:intergenic | 40.0% |
| ! | CCATGTACACCCCTAATTTT+TGG | - | chr3_1:79811963-79811982 | Msa0378940:intron | 40.0% |
| TTACATTGTATGCGGTACTC+TGG | - | chr3_1:79812360-79812379 | Msa0378940:intron | 40.0% | |
| ATGAATGCCCATATCCTGAT+TGG | - | chr3_1:79812397-79812416 | Msa0378940:intron | 40.0% | |
| TGAATGCCCATATCCTGATT+GGG | - | chr3_1:79812398-79812417 | Msa0378940:intron | 40.0% | |
| GGGATCAACCCAAGTTTATT+AGG | + | chr3_1:79812484-79812503 | None:intergenic | 40.0% | |
| !! | AATAAACTTGGGTTGATCCC+AGG | - | chr3_1:79812484-79812503 | Msa0378940:intron | 40.0% |
| CCCAGGTTATTTATACGTCA+TGG | - | chr3_1:79812501-79812520 | Msa0378940:intron | 40.0% | |
| !!! | GTTTTTTATCTGAGCTGTGC+AGG | - | chr3_1:79812526-79812545 | Msa0378940:intron | 40.0% |
| TTTAGTCCCTGCTATAGTGA+GGG | - | chr3_1:79812622-79812641 | Msa0378940:CDS | 40.0% | |
| ! | TCTTTTCCCTCACTATAGCA+GGG | + | chr3_1:79812631-79812650 | None:intergenic | 40.0% |
| ! | ATCTTTTCCCTCACTATAGC+AGG | + | chr3_1:79812632-79812651 | None:intergenic | 40.0% |
| ATATTTCTTGGCGCGTGAGT+TGG | - | chr3_1:79805257-79805276 | Msa0378940:three_prime_UTR | 45.0% | |
| AGGTTAAAAATCGATGGGCG+GGG | - | chr3_1:79805624-79805643 | Msa0378940:intron | 45.0% | |
| TATGATGTTGCTCGCTAGCT+CGG | - | chr3_1:79805812-79805831 | Msa0378940:intron | 45.0% | |
| TAGGTTAGTGCGGTGAAATG+TGG | - | chr3_1:79805859-79805878 | Msa0378940:intron | 45.0% | |
| TTAGTGCGGTGAAATGTGGA+AGG | - | chr3_1:79805863-79805882 | Msa0378940:intron | 45.0% | |
| TCTATTACTACGGGCCTACT+TGG | + | chr3_1:79806384-79806403 | None:intergenic | 45.0% | |
| TCATGGTGAGGTATACGGAA+GGG | + | chr3_1:79806842-79806861 | None:intergenic | 45.0% | |
| AGTCCTCATGGTGAGGTATA+CGG | + | chr3_1:79806847-79806866 | None:intergenic | 45.0% | |
| GCTATAAAGTCCTCATGGTG+AGG | + | chr3_1:79806854-79806873 | None:intergenic | 45.0% | |
| CTATTAGTTGCCTAAGGGTC+TGG | - | chr3_1:79807336-79807355 | Msa0378940:intron | 45.0% | |
| ! | TTACAAAGCACCAGACCCTT+AGG | + | chr3_1:79807349-79807368 | None:intergenic | 45.0% |
| GGTACATAGGTTCATCCATG+TGG | - | chr3_1:79807421-79807440 | Msa0378940:intron | 45.0% | |
| GCATCCTTCAAGCAGAACAT+GGG | - | chr3_1:79807470-79807489 | Msa0378940:intron | 45.0% | |
| CAGCTGAGACAATCATGTCA+AGG | + | chr3_1:79807764-79807783 | None:intergenic | 45.0% | |
| TAATAAGGAGTCCGGAGACA+AGG | + | chr3_1:79807803-79807822 | None:intergenic | 45.0% | |
| !! | GTCCGCTTTTGTAGCATTTC+TGG | + | chr3_1:79807829-79807848 | None:intergenic | 45.0% |
| !!! | AGCGGACAGTTTTAGACAAG+AGG | - | chr3_1:79807842-79807861 | Msa0378940:intron | 45.0% |
| ACAAGAGGTAAGTTTGGGCT+TGG | - | chr3_1:79807857-79807876 | Msa0378940:intron | 45.0% | |
| GCTTAAGCATTTGAGCTGTC+TGG | - | chr3_1:79807987-79808006 | Msa0378940:intron | 45.0% | |
| TGGTTGTTACAGATTGAGGC+TGG | - | chr3_1:79808664-79808683 | Msa0378940:intron | 45.0% | |
| ! | CCTTCTCGCAATAGTCCTTT+TGG | + | chr3_1:79810546-79810565 | None:intergenic | 45.0% |
| CCAAAAGGACTATTGCGAGA+AGG | - | chr3_1:79810543-79810562 | Msa0378940:intron | 45.0% | |
| CAGAGACTCTACAAAAGGGA+AGG | - | chr3_1:79810827-79810846 | Msa0378940:intron | 45.0% | |
| ! | GTTTTATGCGAACCAGTCAC+TGG | - | chr3_1:79810900-79810919 | Msa0378940:intron | 45.0% |
| ACATTGCTGGTACCTTCAAG+GGG | - | chr3_1:79811123-79811142 | Msa0378940:intron | 45.0% | |
| TCAGCATCAAAACCCCTTGA+AGG | + | chr3_1:79811138-79811157 | None:intergenic | 45.0% | |
| GACTGTTGTGACACATCACT+AGG | + | chr3_1:79811201-79811220 | None:intergenic | 45.0% | |
| CGCGTATCTACACAAAAGGT+AGG | + | chr3_1:79811462-79811481 | None:intergenic | 45.0% | |
| CGCGTTCATTTACAGTCTTC+TGG | - | chr3_1:79811478-79811497 | Msa0378940:intron | 45.0% | |
| ! | TGTCCAAATTTGGCACCGAA+GGG | - | chr3_1:79811691-79811710 | Msa0378940:intron | 45.0% |
| ! | ATTAGGGGTGTACATGGGTT+GGG | + | chr3_1:79811960-79811979 | None:intergenic | 45.0% |
| ! | AATTAGGGGTGTACATGGGT+TGG | + | chr3_1:79811961-79811980 | None:intergenic | 45.0% |
| GTTTCGCCCAATCAGGATAT+GGG | + | chr3_1:79812407-79812426 | None:intergenic | 45.0% | |
| AGTTTCGCCCAATCAGGATA+TGG | + | chr3_1:79812408-79812427 | None:intergenic | 45.0% | |
| AGCTAAAGTTTCGCCCAATC+AGG | + | chr3_1:79812414-79812433 | None:intergenic | 45.0% | |
| CTTTAGTCCCTGCTATAGTG+AGG | - | chr3_1:79812621-79812640 | Msa0378940:CDS | 45.0% | |
| !! | AATTTACTTATTAAAAATAT+TGG | + | chr3_1:79808032-79808051 | None:intergenic | 5.0% |
| !!! | CTATTTATATTTATATTTTA+TGG | - | chr3_1:79812146-79812165 | Msa0378940:intron | 5.0% |
| TGCGGTAAAGGAGGATTTGC+TGG | + | chr3_1:79805347-79805366 | None:intergenic | 50.0% | |
| AGTTGACGGTGAAATCGTGC+CGG | - | chr3_1:79805891-79805910 | Msa0378940:intron | 50.0% | |
| ACATCACAAGCCATCACAGG+TGG | + | chr3_1:79806046-79806065 | None:intergenic | 50.0% | |
| GGAACATCACAAGCCATCAC+AGG | + | chr3_1:79806049-79806068 | None:intergenic | 50.0% | |
| TTGTAAGCCTGCATCTGTCC+CGG | - | chr3_1:79806102-79806121 | Msa0378940:intron | 50.0% | |
| TTACTTACCGGGACAGATGC+AGG | + | chr3_1:79806112-79806131 | None:intergenic | 50.0% | |
| AAACACATACAGGGCCCGTT+TGG | - | chr3_1:79806169-79806188 | Msa0378940:intron | 50.0% | |
| CTCATGGTGAGGTATACGGA+AGG | + | chr3_1:79806843-79806862 | None:intergenic | 50.0% | |
| CTTCCGTATACCTCACCATG+AGG | - | chr3_1:79806841-79806860 | Msa0378940:intron | 50.0% | |
| TAACTGCCATGCCTTCGCAT+TGG | - | chr3_1:79806947-79806966 | Msa0378940:intron | 50.0% | |
| GGCATCCTTCAAGCAGAACA+TGG | - | chr3_1:79807469-79807488 | Msa0378940:intron | 50.0% | |
| AGTTTGGGCTTGGACTTGTC+TGG | - | chr3_1:79807867-79807886 | Msa0378940:intron | 50.0% | |
| AGTAGTTGGGGAATTTCCCG+AGG | - | chr3_1:79808714-79808733 | Msa0378940:intron | 50.0% | |
| ! | AGAAGGAAGAAGCACAGCAG+AGG | - | chr3_1:79809598-79809617 | Msa0378940:intron | 50.0% |
| ! | CTGAGCTGTTGCCATTTGCA+TGG | - | chr3_1:79811154-79811173 | Msa0378940:intron | 50.0% |
| ATACGCTGGGATAGCATGAC+TGG | + | chr3_1:79811262-79811281 | None:intergenic | 50.0% | |
| ! | CGGTGCCAAATTTGGACAGT+TGG | + | chr3_1:79811689-79811708 | None:intergenic | 50.0% |
| ! | CTGTCCAAATTTGGCACCGA+AGG | - | chr3_1:79811690-79811709 | Msa0378940:intron | 50.0% |
| ! | GTCCAAATTTGGCACCGAAG+GGG | - | chr3_1:79811692-79811711 | Msa0378940:intron | 50.0% |
| !! | TACCCCTTCGGTGCCAAATT+TGG | + | chr3_1:79811697-79811716 | None:intergenic | 50.0% |
| TGAGGCAGAGTAGAAACCAC+TGG | + | chr3_1:79812239-79812258 | None:intergenic | 50.0% | |
| GGGCATTCATATGTCCATCC+AGG | + | chr3_1:79812387-79812406 | None:intergenic | 50.0% | |
| CAGGCATGAACCACCTGTGA+TGG | - | chr3_1:79806033-79806052 | Msa0378940:intron | 55.0% | |
| CATACAGGGCCCGTTTGGAT+TGG | - | chr3_1:79806174-79806193 | Msa0378940:intron | 55.0% | |
| TACTACGGGCCTACTTGGAC+TGG | + | chr3_1:79806379-79806398 | None:intergenic | 55.0% | |
| CTTACAGACGGCCAATGCGA+AGG | + | chr3_1:79806961-79806980 | None:intergenic | 55.0% | |
| CCAGCCCATGTTCTGCTTGA+AGG | + | chr3_1:79807477-79807496 | None:intergenic | 55.0% | |
| CCTTCAAGCAGAACATGGGC+TGG | - | chr3_1:79807474-79807493 | Msa0378940:intron | 55.0% | |
| TGTCTCAGCTGTCCATCGAC+TGG | - | chr3_1:79807773-79807792 | Msa0378940:intron | 55.0% | |
| AGACAAGGCGATCCAGTCGA+TGG | + | chr3_1:79807788-79807807 | None:intergenic | 55.0% | |
| TGGGGAATTTCCCGAGGATG+AGG | - | chr3_1:79808720-79808739 | Msa0378940:intron | 55.0% | |
| GCAATAGGATGGGCATGTGC+AGG | - | chr3_1:79809160-79809179 | Msa0378940:intron | 55.0% | |
| ! | GAAGAAGCACAGCAGAGGTG+AGG | - | chr3_1:79809603-79809622 | Msa0378940:intron | 55.0% |
| ! | TGATGGTGAGGACACCCAAG+AGG | + | chr3_1:79810603-79810622 | None:intergenic | 55.0% |
| ATTCAAAGTGGCGGCAAGGC+AGG | - | chr3_1:79810753-79810772 | Msa0378940:intron | 55.0% | |
| TGTATGCGGTACTCTGGACC+TGG | - | chr3_1:79812366-79812385 | Msa0378940:intron | 55.0% | |
| AGACGGCCAATGCGAAGGCA+TGG | + | chr3_1:79806956-79806975 | None:intergenic | 60.0% | |
| GAATGGCTGCTCGTGGCACT+TGG | + | chr3_1:79807003-79807022 | None:intergenic | 60.0% | |
| TGCTGCTGAATGGCTGCTCG+TGG | + | chr3_1:79807010-79807029 | None:intergenic | 60.0% | |
| CGACTGGATCGCCTTGTCTC+CGG | - | chr3_1:79807789-79807808 | Msa0378940:intron | 60.0% | |
| CACAGCAGAGGTGAGGCCTT+TGG | - | chr3_1:79809610-79809629 | Msa0378940:intron | 60.0% | |
| TGATGAGTGCGGCCAGTGAC+TGG | + | chr3_1:79810915-79810934 | None:intergenic | 60.0% | |
| AGTCACTGGCCGCACTCATC+AGG | - | chr3_1:79810914-79810933 | Msa0378940:intron | 60.0% | |
| TGCGGTACTCTGGACCTGGA+TGG | - | chr3_1:79812370-79812389 | Msa0378940:intron | 60.0% | |
| AGCTGTGCAGGTTAGCGAGC+AGG | - | chr3_1:79812538-79812557 | Msa0378940:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 79805191 | 79812759 | 79805191 | ID=Msa0378940;Name=Msa0378940 |
| chr3_1 | mRNA | 79805191 | 79812759 | 79805191 | ID=Msa0378940-mRNA-1;Parent=Msa0378940;Name=Msa0378940-mRNA-1;_AED=0.24;_eAED=0.24;_QI=102|1|1|1|1|1|12|328|379 |
| chr3_1 | exon | 79805191 | 79805618 | 79805191 | ID=Msa0378940-mRNA-1:exon:19813;Parent=Msa0378940-mRNA-1 |
| chr3_1 | exon | 79806237 | 79806475 | 79806237 | ID=Msa0378940-mRNA-1:exon:19812;Parent=Msa0378940-mRNA-1 |
| chr3_1 | exon | 79807015 | 79807125 | 79807015 | ID=Msa0378940-mRNA-1:exon:19811;Parent=Msa0378940-mRNA-1 |
| chr3_1 | exon | 79808331 | 79808387 | 79808331 | ID=Msa0378940-mRNA-1:exon:19810;Parent=Msa0378940-mRNA-1 |
| chr3_1 | exon | 79809209 | 79809274 | 79809209 | ID=Msa0378940-mRNA-1:exon:19809;Parent=Msa0378940-mRNA-1 |
| chr3_1 | exon | 79810087 | 79810169 | 79810087 | ID=Msa0378940-mRNA-1:exon:19808;Parent=Msa0378940-mRNA-1 |
| chr3_1 | exon | 79810442 | 79810520 | 79810442 | ID=Msa0378940-mRNA-1:exon:19807;Parent=Msa0378940-mRNA-1 |
| chr3_1 | exon | 79811827 | 79811914 | 79811827 | ID=Msa0378940-mRNA-1:exon:19806;Parent=Msa0378940-mRNA-1 |
| chr3_1 | exon | 79811988 | 79812088 | 79811988 | ID=Msa0378940-mRNA-1:exon:19805;Parent=Msa0378940-mRNA-1 |
| chr3_1 | exon | 79812247 | 79812324 | 79812247 | ID=Msa0378940-mRNA-1:exon:19804;Parent=Msa0378940-mRNA-1 |
| chr3_1 | exon | 79812425 | 79812468 | 79812425 | ID=Msa0378940-mRNA-1:exon:19803;Parent=Msa0378940-mRNA-1 |
| chr3_1 | exon | 79812564 | 79812759 | 79812564 | ID=Msa0378940-mRNA-1:exon:19802;Parent=Msa0378940-mRNA-1 |
| chr3_1 | five_prime_UTR | 79812658 | 79812759 | 79812658 | ID=Msa0378940-mRNA-1:five_prime_utr;Parent=Msa0378940-mRNA-1 |
| chr3_1 | CDS | 79812564 | 79812657 | 79812564 | ID=Msa0378940-mRNA-1:cds;Parent=Msa0378940-mRNA-1 |
| chr3_1 | CDS | 79812425 | 79812468 | 79812425 | ID=Msa0378940-mRNA-1:cds;Parent=Msa0378940-mRNA-1 |
| chr3_1 | CDS | 79812247 | 79812324 | 79812247 | ID=Msa0378940-mRNA-1:cds;Parent=Msa0378940-mRNA-1 |
| chr3_1 | CDS | 79811988 | 79812088 | 79811988 | ID=Msa0378940-mRNA-1:cds;Parent=Msa0378940-mRNA-1 |
| chr3_1 | CDS | 79811827 | 79811914 | 79811827 | ID=Msa0378940-mRNA-1:cds;Parent=Msa0378940-mRNA-1 |
| chr3_1 | CDS | 79810442 | 79810520 | 79810442 | ID=Msa0378940-mRNA-1:cds;Parent=Msa0378940-mRNA-1 |
| chr3_1 | CDS | 79810087 | 79810169 | 79810087 | ID=Msa0378940-mRNA-1:cds;Parent=Msa0378940-mRNA-1 |
| chr3_1 | CDS | 79809209 | 79809274 | 79809209 | ID=Msa0378940-mRNA-1:cds;Parent=Msa0378940-mRNA-1 |
| chr3_1 | CDS | 79808331 | 79808387 | 79808331 | ID=Msa0378940-mRNA-1:cds;Parent=Msa0378940-mRNA-1 |
| chr3_1 | CDS | 79807015 | 79807125 | 79807015 | ID=Msa0378940-mRNA-1:cds;Parent=Msa0378940-mRNA-1 |
| chr3_1 | CDS | 79806237 | 79806475 | 79806237 | ID=Msa0378940-mRNA-1:cds;Parent=Msa0378940-mRNA-1 |
| chr3_1 | CDS | 79805519 | 79805618 | 79805519 | ID=Msa0378940-mRNA-1:cds;Parent=Msa0378940-mRNA-1 |
| chr3_1 | three_prime_UTR | 79805191 | 79805518 | 79805191 | ID=Msa0378940-mRNA-1:three_prime_utr;Parent=Msa0378940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
