AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0477150

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0477150 MtrunA17_Chr3g0139021 82.483 451 29 4 1 451 1 401 0.0 671
Msa0477150 MtrunA17_Chr1g0147881 61.635 159 51 5 279 432 178 331 8.25e-57 191
Msa0477150 MtrunA17_Chr1g0147881 42.723 213 85 9 1 179 1 210 5.49e-28 113
Msa0477150 MtrunA17_Chr4g0071521 62.143 140 43 4 281 419 174 304 8.58e-52 177
Msa0477150 MtrunA17_Chr4g0071521 32.710 214 90 8 1 179 1 195 4.76e-12 67.0
Msa0477150 MtrunA17_Chr7g0228941 92.593 81 5 1 339 419 31 110 5.65e-48 160
Msa0477150 MtrunA17_Chr4g0053281 58.871 124 49 1 296 417 200 323 4.35e-42 152
Msa0477150 MtrunA17_Chr5g0401821 59.483 116 46 1 303 417 141 256 5.27e-40 144
Msa0477150 MtrunA17_Chr1g0184691 62.500 80 30 0 338 417 271 350 2.76e-31 123
Msa0477150 MtrunA17_Chr2g0293481 48.454 97 45 2 326 417 228 324 5.42e-24 104
Msa0477150 MtrunA17_Chr2g0284321 52.439 82 38 1 337 417 11 92 8.68e-24 99.0
Msa0477150 MtrunA17_Chr2g0319961 49.462 93 31 2 336 417 50 137 5.42e-23 97.8
Msa0477150 MtrunA17_Chr7g0248691 43.396 106 49 3 312 417 117 211 2.69e-22 97.4
Msa0477150 MtrunA17_Chr8g0379461 40.952 105 55 2 320 417 29 133 2.89e-21 92.4
Msa0477150 MtrunA17_Chr2g0289181 56.250 64 28 0 354 417 8 71 3.14e-21 92.4
Msa0477150 MtrunA17_Chr8g0348311 50.000 80 39 1 338 417 134 212 1.67e-20 92.4
Msa0477150 MtrunA17_Chr7g0270051 43.023 86 40 1 341 417 25 110 1.82e-20 90.9
Msa0477150 MtrunA17_Chr8g0387501 58.333 60 25 0 360 419 129 188 3.37e-18 84.3
Msa0477150 MtrunA17_Chr5g0418781 44.706 85 46 1 336 420 100 183 4.58e-18 84.3
Msa0477150 MtrunA17_Chr2g0288871 48.649 74 38 0 344 417 289 362 1.86e-17 84.7
Msa0477150 MtrunA17_Chr7g0238921 37.615 109 53 3 339 436 106 210 2.19e-17 82.8
Msa0477150 MtrunA17_Chr1g0202461 43.373 83 46 1 336 417 236 318 2.57e-17 83.6
Msa0477150 MtrunA17_Chr8g0383351 51.613 62 29 1 356 417 156 216 3.30e-17 80.9
Msa0477150 MtrunA17_Chr1g0194481 40.217 92 54 1 326 417 124 214 5.36e-17 81.6
Msa0477150 MtrunA17_Chr3g0099641 45.946 74 40 0 344 417 235 308 6.04e-17 82.8
Msa0477150 MtrunA17_Chr2g0322391 47.297 74 39 0 344 417 333 406 6.89e-17 83.2
Msa0477150 MtrunA17_Chr3g0129361 51.613 62 29 1 356 417 140 200 8.46e-17 79.3
Msa0477150 MtrunA17_Chr5g0443131 47.222 72 37 1 347 418 144 214 9.29e-17 80.9
Msa0477150 MtrunA17_Chr4g0075201 47.297 74 39 0 344 417 251 324 1.03e-16 82.4
Msa0477150 MtrunA17_Chr8g0335811 44.706 85 43 3 336 417 127 210 1.06e-16 79.0
Msa0477150 MtrunA17_Chr7g0270191 38.614 101 60 2 317 417 103 201 1.08e-16 80.5
Msa0477150 MtrunA17_Chr7g0270831 45.946 74 40 0 344 417 200 273 2.07e-16 81.3
Msa0477150 MtrunA17_Chr5g0445311 47.297 74 38 1 344 417 348 420 3.61e-16 80.9
Msa0477150 MtrunA17_Chr4g0051881 45.070 71 38 1 347 417 165 234 3.76e-16 79.3
Msa0477150 MtrunA17_Chr1g0150281 52.632 57 27 0 361 417 141 197 4.00e-16 78.6
Msa0477150 MtrunA17_Chr3g0101131 43.678 87 42 2 344 424 399 484 5.30e-16 80.5
Msa0477150 MtrunA17_Chr5g0432161 48.052 77 39 1 341 417 402 477 5.63e-16 80.5
Msa0477150 MtrunA17_Chr3g0106491 47.436 78 40 1 340 417 345 421 7.41e-16 79.7
Msa0477150 MtrunA17_Chr7g0263531 52.239 67 31 1 352 418 353 418 9.17e-16 79.3
Msa0477150 MtrunA17_Chr7g0263531 45.122 82 38 4 356 436 184 259 7.89e-13 70.1
Msa0477150 MtrunA17_Chr2g0294231 45.333 75 40 1 343 417 186 259 1.45e-15 78.2
Msa0477150 MtrunA17_Chr7g0216891 48.101 79 33 2 341 417 204 276 1.63e-15 79.0
Msa0477150 MtrunA17_Chr4g0060271 47.368 76 36 3 344 417 239 312 1.67e-15 79.0
Msa0477150 MtrunA17_Chr4g0001361 45.455 77 38 1 358 434 160 232 1.78e-15 77.0
Msa0477150 MtrunA17_Chr2g0333851 36.047 86 43 1 344 417 141 226 1.98e-15 77.0
Msa0477150 MtrunA17_Chr1g0150801 43.662 71 39 1 347 417 89 158 2.55e-15 73.6
Msa0477150 MtrunA17_Chr7g0218081 53.226 62 28 1 356 417 406 466 2.77e-15 78.2
Msa0477150 MtrunA17_Chr7g0218081 46.053 76 38 3 357 431 224 297 1.48e-13 72.8
Msa0477150 MtrunA17_Chr3g0136961 45.455 66 34 1 361 426 139 202 3.24e-15 75.9
Msa0477150 MtrunA17_Chr3g0079691 39.604 101 55 2 322 417 452 551 3.57e-15 78.2
Msa0477150 MtrunA17_Chr3g0079691 47.368 57 28 2 361 417 281 335 2.59e-11 65.9
Msa0477150 MtrunA17_Chr1g0150271 51.667 60 29 0 358 417 99 158 3.75e-15 75.1
Msa0477150 MtrunA17_Chr8g0387981 40.816 98 46 3 336 422 100 196 3.90e-15 76.6
Msa0477150 MtrunA17_Chr4g0074001 55.000 60 26 1 358 417 357 415 4.64e-15 77.4
Msa0477150 MtrunA17_Chr4g0051181 46.667 75 36 1 343 417 230 300 4.75e-15 77.0
Msa0477150 MtrunA17_Chr4g0068541 44.595 74 40 1 344 417 192 264 9.50e-15 75.9
Msa0477150 MtrunA17_Chr7g0249311 35.821 134 60 5 318 431 330 457 1.09e-14 76.6
Msa0477150 MtrunA17_Chr7g0249311 43.939 66 35 2 356 421 175 238 6.69e-11 64.7
Msa0477150 MtrunA17_Chr2g0302391 41.333 75 44 0 344 418 195 269 1.39e-14 75.5
Msa0477150 MtrunA17_Chr1g0189391 41.584 101 46 4 329 417 55 154 1.54e-14 74.7
Msa0477150 MtrunA17_Chr5g0418191 50.000 62 30 1 356 417 316 376 1.71e-14 75.1
Msa0477150 MtrunA17_Chr5g0418191 47.761 67 32 3 352 417 142 206 1.56e-11 65.9
Msa0477150 MtrunA17_Chr4g0004911 42.857 77 43 1 341 417 317 392 2.22e-14 75.1
Msa0477150 MtrunA17_Chr6g0485431 29.577 213 118 10 222 417 14 211 2.56e-14 74.3
Msa0477150 MtrunA17_Chr7g0249301 46.154 78 38 2 343 417 272 348 6.60e-14 73.2
Msa0477150 MtrunA17_Chr7g0249301 49.123 57 27 2 361 417 63 117 5.36e-11 63.9
Msa0477150 MtrunA17_Chr4g0042831 48.387 62 31 1 356 417 274 334 9.47e-14 72.8
Msa0477150 MtrunA17_Chr7g0275531 42.553 94 46 5 336 424 92 182 1.13e-13 72.0
Msa0477150 MtrunA17_Chr7g0243891 32.143 140 83 3 278 417 303 430 5.53e-13 70.9
Msa0477150 MtrunA17_Chr1g0188941 40.260 77 45 1 341 417 32 107 5.63e-13 65.5
Msa0477150 MtrunA17_Chr3g0126391 52.632 57 25 1 361 415 134 190 5.67e-13 69.7
Msa0477150 MtrunA17_Chr7g0224801 45.161 62 33 1 356 417 89 149 1.53e-12 65.9
Msa0477150 MtrunA17_Chr8g0383251 44.262 61 33 1 357 417 105 164 3.32e-12 65.1
Msa0477150 MtrunA17_Chr3g0129321 41.935 62 35 1 357 418 115 175 3.33e-12 65.5
Msa0477150 MtrunA17_Chr4g0025051 45.614 57 31 0 361 417 336 392 6.94e-12 67.4
Msa0477150 MtrunA17_Chr5g0447701 43.662 71 39 1 347 417 239 308 7.03e-12 67.0
Msa0477150 MtrunA17_Chr4g0025061 40.580 69 40 1 350 417 349 417 1.82e-11 66.2
Msa0477150 MtrunA17_Chr8g0347251 49.123 57 27 1 361 415 137 193 6.47e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0477150 AT4G31550.2 63.690 168 52 4 272 434 152 315 3.89e-63 207
Msa0477150 AT4G31550.2 35.521 259 105 9 1 219 1 237 6.63e-29 116
Msa0477150 AT4G31550.1 63.314 169 52 5 272 434 152 316 2.21e-61 202
Msa0477150 AT4G31550.1 35.385 260 105 9 1 219 1 238 8.08e-29 116
Msa0477150 AT2G24570.1 58.084 167 57 6 278 436 154 315 6.01e-53 181
Msa0477150 AT2G24570.1 37.295 244 119 11 1 219 1 235 1.64e-22 98.2
Msa0477150 AT4G24240.1 51.923 156 58 5 267 417 195 338 2.66e-42 153
Msa0477150 AT4G31550.3 64.912 114 35 3 272 380 152 265 1.00e-37 139
Msa0477150 AT4G31550.3 35.521 259 105 9 1 219 1 237 4.25e-29 115
Msa0477150 AT2G30590.1 58.879 107 41 2 321 424 271 377 7.03e-37 139
Msa0477150 AT2G23320.1 54.867 113 46 3 309 417 186 297 1.22e-36 137
Msa0477150 AT5G28650.1 44.828 174 80 6 248 420 164 322 1.77e-36 137
Msa0477150 AT3G04670.1 45.238 168 74 5 254 420 172 322 2.93e-36 136
Msa0477150 AT4G24240.2 50.420 119 42 5 267 380 195 301 3.83e-24 102
Msa0477150 AT2G34830.1 50.575 87 38 2 336 417 186 272 4.09e-23 101
Msa0477150 AT3G58710.2 49.462 93 31 2 336 417 40 127 4.14e-23 99.0
Msa0477150 AT2G34830.2 50.575 87 38 2 336 417 195 281 5.14e-23 101
Msa0477150 AT1G29280.1 61.017 59 23 0 359 417 73 131 7.63e-23 97.8
Msa0477150 AT4G01250.1 44.898 98 49 1 320 417 93 185 1.31e-22 98.2
Msa0477150 AT1G30650.1 46.392 97 47 2 326 417 178 274 1.72e-22 99.8
Msa0477150 AT3G58710.1 48.387 93 32 2 336 417 41 128 2.14e-22 97.1
Msa0477150 AT5G45050.1 33.503 197 110 8 225 417 1058 1237 5.27e-21 97.1
Msa0477150 AT5G45050.2 33.503 197 110 8 225 417 1030 1209 5.38e-21 97.1
Msa0477150 AT5G45050.4 33.503 197 110 8 225 417 919 1098 5.47e-21 97.1
Msa0477150 AT5G52830.1 51.220 82 36 2 336 417 145 222 8.43e-21 93.6
Msa0477150 AT3G04670.2 43.182 132 57 5 254 384 172 286 7.92e-20 89.7
Msa0477150 AT2G23320.2 53.947 76 30 3 309 380 186 260 1.87e-18 85.5
Msa0477150 AT1G29860.1 37.607 117 70 2 303 417 77 192 2.20e-18 85.5
Msa0477150 AT4G39410.1 46.988 83 40 2 338 417 198 279 4.33e-18 85.1
Msa0477150 AT1G69310.4 45.349 86 45 2 336 420 122 206 8.90e-18 84.0
Msa0477150 AT1G69310.2 45.349 86 45 2 336 420 122 206 8.90e-18 84.0
Msa0477150 AT1G69310.1 45.349 86 45 2 336 420 122 206 8.90e-18 84.0
Msa0477150 AT4G18170.1 41.053 95 50 2 323 417 140 228 1.79e-17 83.6
Msa0477150 AT4G04450.2 42.553 94 54 0 324 417 162 255 1.94e-17 84.7
Msa0477150 AT2G47260.1 40.217 92 54 1 326 417 140 230 2.50e-17 83.2
Msa0477150 AT5G07100.1 37.143 105 64 2 315 418 188 291 3.85e-17 82.4
Msa0477150 AT4G04450.1 42.553 94 54 0 324 417 256 349 4.72e-17 84.0
Msa0477150 AT5G26170.1 41.333 75 43 1 347 421 100 173 4.97e-17 79.0
Msa0477150 AT4G23550.1 51.613 62 30 0 357 418 137 198 7.80e-17 81.6
Msa0477150 AT1G62300.1 47.297 74 39 0 344 417 296 369 1.15e-16 82.8
Msa0477150 AT2G44745.1 44.048 84 43 3 337 417 119 201 1.21e-16 79.3
Msa0477150 AT5G07100.2 37.143 105 64 2 315 418 95 198 1.24e-16 79.0
Msa0477150 AT5G07100.4 37.143 105 64 2 315 418 95 198 1.24e-16 79.0
Msa0477150 AT5G07100.5 37.143 105 64 2 315 418 95 198 1.24e-16 79.0
Msa0477150 AT5G07100.3 37.143 105 64 2 315 418 95 198 1.24e-16 79.0
Msa0477150 AT4G22070.4 47.297 74 39 0 344 417 281 354 1.42e-16 82.4
Msa0477150 AT4G22070.3 47.297 74 39 0 344 417 281 354 1.42e-16 82.4
Msa0477150 AT4G22070.2 47.297 74 39 0 344 417 281 354 1.42e-16 82.4
Msa0477150 AT4G22070.1 47.297 74 39 0 344 417 281 354 1.42e-16 82.4
Msa0477150 AT5G49520.1 45.946 74 39 1 344 417 205 277 1.71e-16 81.6
Msa0477150 AT4G31800.2 37.615 109 64 2 346 452 97 203 2.31e-16 79.0
Msa0477150 AT2G37260.3 45.882 85 43 2 338 420 245 328 2.76e-16 80.5
Msa0477150 AT2G37260.2 45.882 85 43 2 338 420 243 326 2.87e-16 80.5
Msa0477150 AT2G37260.1 53.846 65 29 1 356 420 345 408 3.18e-16 80.9
Msa0477150 AT5G46350.1 46.479 71 37 1 347 417 170 239 3.68e-16 79.7
Msa0477150 AT5G15130.2 43.434 99 42 4 321 417 156 242 4.19e-16 80.9
Msa0477150 AT5G15130.1 43.434 99 42 4 321 417 198 284 4.54e-16 80.9
Msa0477150 AT4G31800.1 37.615 109 64 2 346 452 162 268 6.17e-16 79.0
Msa0477150 AT4G26640.5 47.297 74 38 1 344 417 189 261 1.60e-15 78.6
Msa0477150 AT4G26640.6 47.297 74 38 1 344 417 189 261 1.60e-15 78.6
Msa0477150 AT4G26640.4 47.297 74 38 1 344 417 189 261 1.60e-15 78.6
Msa0477150 AT4G26640.3 47.297 74 38 1 344 417 189 261 1.60e-15 78.6
Msa0477150 AT4G26640.1 47.297 74 38 1 344 417 293 365 1.73e-15 79.0
Msa0477150 AT4G26640.7 47.297 74 38 1 344 417 325 397 1.82e-15 79.0
Msa0477150 AT4G26640.2 47.297 74 38 1 344 417 365 437 1.95e-15 79.0
Msa0477150 AT4G01720.1 47.297 74 39 0 344 417 223 296 2.51e-15 78.6
Msa0477150 AT2G04880.2 46.479 71 37 1 347 417 270 339 3.08e-15 78.2
Msa0477150 AT2G04880.1 46.479 71 37 1 347 417 294 363 3.57e-15 78.2
Msa0477150 AT1G64000.1 49.180 61 30 1 357 417 111 170 5.06e-15 73.9
Msa0477150 AT1G66550.2 38.281 128 66 4 290 415 44 160 5.76e-15 75.1
Msa0477150 AT2G03340.1 46.479 71 37 1 347 417 402 471 5.86e-15 77.4
Msa0477150 AT2G03340.1 46.032 63 31 3 356 417 245 305 7.02e-11 64.7
Msa0477150 AT2G38470.1 45.946 74 39 1 344 417 346 418 6.10e-15 77.4
Msa0477150 AT5G41570.1 41.250 80 46 1 338 417 76 154 6.19e-15 73.2
Msa0477150 AT3G01080.2 51.613 62 29 1 356 417 340 400 7.43e-15 77.0
Msa0477150 AT3G01080.2 43.529 85 45 3 357 440 201 283 9.11e-14 73.6
Msa0477150 AT1G13960.1 46.479 71 37 1 347 417 396 465 1.03e-14 76.6
Msa0477150 AT2G40740.1 44.048 84 43 3 336 415 147 230 1.15e-14 74.7
Msa0477150 AT3G01080.1 51.613 62 29 1 356 417 302 362 1.23e-14 75.9
Msa0477150 AT3G01080.1 43.529 85 45 3 357 440 163 245 1.39e-13 72.8
Msa0477150 AT2G40740.3 44.048 84 43 3 336 415 156 239 1.58e-14 74.7
Msa0477150 AT1G13960.2 46.479 71 37 1 347 417 243 312 1.99e-14 75.1
Msa0477150 AT5G56270.1 45.455 77 41 1 341 417 468 543 2.59e-14 75.9
Msa0477150 AT1G68150.1 45.333 75 37 1 343 417 222 292 2.96e-14 74.3
Msa0477150 AT3G01080.3 43.529 85 45 3 357 440 201 283 3.02e-14 73.9
Msa0477150 AT1G18860.1 52.632 57 27 0 361 417 240 296 3.35e-14 75.1
Msa0477150 AT4G30935.1 51.667 60 28 1 358 417 329 387 4.57e-14 74.3
Msa0477150 AT3G62340.1 42.500 80 45 1 338 417 96 174 4.74e-14 72.8
Msa0477150 AT4G26440.1 41.237 97 51 2 341 437 353 443 4.86e-14 74.7
Msa0477150 AT4G26440.1 46.667 60 29 3 359 417 176 233 8.91e-11 64.3
Msa0477150 AT2G25000.2 47.368 57 30 0 361 417 104 160 6.96e-14 71.2
Msa0477150 AT2G25000.4 47.368 57 30 0 361 417 104 160 6.96e-14 71.2
Msa0477150 AT2G25000.3 47.368 57 30 0 361 417 126 182 1.15e-13 71.2
Msa0477150 AT2G25000.1 47.368 57 30 0 361 417 147 203 1.82e-13 70.9
Msa0477150 AT5G64810.1 32.540 126 77 3 304 422 47 171 3.21e-13 68.6
Msa0477150 AT1G66550.1 38.043 92 47 2 334 415 74 165 3.49e-13 69.7
Msa0477150 AT5G45260.1 32.692 156 89 7 274 417 1116 1267 3.62e-13 72.4
Msa0477150 AT1G69310.3 41.860 86 44 3 336 420 122 202 4.10e-13 70.1
Msa0477150 AT1G80840.1 41.667 60 35 0 358 417 144 203 5.64e-13 69.7
Msa0477150 AT5G43290.1 42.857 77 40 2 342 418 99 171 2.63e-12 67.4
Msa0477150 AT1G66560.1 50.847 59 27 1 359 415 102 160 2.93e-12 67.0
Msa0477150 AT2G46130.1 45.161 62 33 1 356 417 26 86 4.10e-12 63.2
Msa0477150 AT1G80590.1 44.304 79 37 2 361 437 86 159 5.62e-12 65.9
Msa0477150 AT1G55600.1 38.961 77 46 1 341 417 288 363 6.45e-12 67.8
Msa0477150 AT2G21900.1 45.614 57 30 1 361 417 110 165 8.26e-12 64.7
Msa0477150 AT1G69810.2 36.364 99 53 5 344 439 129 220 8.70e-12 66.6
Msa0477150 AT1G69810.1 36.364 99 53 5 344 439 187 278 1.02e-11 66.6
Msa0477150 AT2G30250.1 41.096 73 40 2 345 417 315 384 2.64e-11 65.5
Msa0477150 AT3G01970.1 33.036 112 74 1 306 417 11 121 5.79e-11 60.8
Msa0477150 AT5G13080.1 31.897 116 73 3 307 417 9 123 8.47e-11 60.5

Find 167 sgRNAs with CRISPR-Local

Find 412 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTCTAGATCTAAGGATTT+AGG 0.160577 3_3:+81322790 None:intergenic
GGATTTAGGGTTAGATTTAA+AGG 0.234283 3_3:+81322804 None:intergenic
AGGGAGTGGGAGCATGGATT+TGG 0.234912 3_3:-81321509 Msa0477150:CDS
GGGAGTGGGAGCATGGATTT+GGG 0.237711 3_3:-81321508 Msa0477150:CDS
TACGTTACAACTAGTATATT+TGG 0.242016 3_3:+81321604 None:intergenic
CTTGGGGATTTCTAGATCTA+AGG 0.245293 3_3:+81322783 None:intergenic
GAAAATGACTTTGAGATTGA+TGG 0.268812 3_3:-81323175 None:intergenic
AATAATTCTGGTTCAGGTTC+AGG 0.270724 3_3:-81321529 Msa0477150:CDS
GTATGGTTCCAAACCGATTA+AGG 0.275343 3_3:-81321811 Msa0477150:CDS
TTTATTTCAGGGGTTATTAT+AGG 0.286785 3_3:-81321684 Msa0477150:intron
TTTCTAGATCTAAGGATTTA+GGG 0.294531 3_3:+81322791 None:intergenic
AAAGGTTGGTTATGGCTCTT+AGG 0.300408 3_3:+81322853 None:intergenic
GGATGTGGTGTTCCCTTAAT+CGG 0.308127 3_3:+81321798 None:intergenic
TTAGTAAAATCGAGAGTTAA+AGG 0.311607 3_3:+81322835 None:intergenic
CAGAATTATTCTCTTGCATT+GGG 0.323224 3_3:+81321542 None:intergenic
CAAGAGAATAATTCTGGTTC+AGG 0.324630 3_3:-81321535 Msa0477150:CDS
AATCACTCCGGCGATGTCTC+TGG 0.334104 3_3:-81322220 Msa0477150:CDS
GTTTGTGGCAGCGGTTGATC+AGG 0.340156 3_3:+81322937 None:intergenic
GGAAGCGAGCGTGGCCTTTA+CGG 0.340610 3_3:+81322980 None:intergenic
GCCGGTGTAATGGCCGGTGA+TGG 0.353361 3_3:+81322468 None:intergenic
ACCCTCACCCCTGCTGTCTC+TGG 0.371044 3_3:-81322289 Msa0477150:CDS
GGAAAACTAAATGTTTCCTT+GGG 0.371745 3_3:+81322766 None:intergenic
CCAATGCAAGAGAATAATTC+TGG 0.372712 3_3:-81321541 Msa0477150:CDS
CTGAGTAGAGGTGGAGGGAG+TGG 0.376016 3_3:+81322912 None:intergenic
TGGAAAACTAAATGTTTCCT+TGG 0.386222 3_3:+81322765 None:intergenic
GGTTGATCAGGGGTTGCATT+TGG 0.390158 3_3:+81322949 None:intergenic
CCGGTGTAATGGCCGGTGAT+GGG 0.391889 3_3:+81322469 None:intergenic
GAGTATTCATGGAGGAAGTA+TGG 0.396538 3_3:-81321828 Msa0477150:CDS
CGAGAGTTAAAGGTTGGTTA+TGG 0.401114 3_3:+81322845 None:intergenic
TGTTTACCACGGGAGATAGA+AGG 0.401450 3_3:+81322397 None:intergenic
TGAAGTGGTGGTGGTGGAGG+TGG 0.402228 3_3:+81322889 None:intergenic
TGGTGTTCCCTTAATCGGTT+TGG 0.407293 3_3:+81321803 None:intergenic
AAAATTGTCCAGCTAGGAAA+AGG 0.409042 3_3:-81321648 Msa0477150:CDS
CCAGAATTATTCTCTTGCAT+TGG 0.415510 3_3:+81321541 None:intergenic
GGGTTAGATTTAAAGGTGTA+AGG 0.415786 3_3:+81322811 None:intergenic
ATTTGAAGTGGTGGTGGTGG+AGG 0.418020 3_3:+81322886 None:intergenic
GGGGTGTTTGAGCTAACCTT+AGG 0.419189 3_3:-81321487 Msa0477150:CDS
GGAGTGGGAGCATGGATTTG+GGG 0.422889 3_3:-81321507 Msa0477150:CDS
CGGTGTAATGGCCGGTGATG+GGG 0.429599 3_3:+81322470 None:intergenic
TAGGTGAAAGAGGTGGTTTA+CGG 0.430257 3_3:+81322653 None:intergenic
TGGAGGTGGCTGAGTAGAGG+TGG 0.430349 3_3:+81322903 None:intergenic
TACCAGCAGATGAGTATTCA+TGG 0.434617 3_3:-81321839 Msa0477150:CDS
GTGGAGGGAGTGGAAGTTTG+TGG 0.440856 3_3:+81322922 None:intergenic
CACTGGCTTCGCCGGTGTAA+TGG 0.443886 3_3:+81322458 None:intergenic
GAGATAGAAGGGGTGAGGAG+TGG 0.448554 3_3:+81322409 None:intergenic
AACACTGCCGTCGCCGGTGA+TGG 0.454613 3_3:+81322726 None:intergenic
TAAAATCGAGAGTTAAAGGT+TGG 0.454643 3_3:+81322839 None:intergenic
AGAGACATTATTAGCGAAGT+TGG 0.457022 3_3:+81323080 None:intergenic
GGTTTACGGCTGGAGACAGC+AGG 0.462315 3_3:+81322667 None:intergenic
AGGTGGCTGAGTAGAGGTGG+AGG 0.473021 3_3:+81322906 None:intergenic
GAGTGGGAGCATGGATTTGG+GGG 0.475482 3_3:-81321506 Msa0477150:CDS
AAAGATGAGTAAGATGTAAG+AGG 0.475709 3_3:+81322373 None:intergenic
CTCCATGAATACTCATCTGC+TGG 0.476195 3_3:+81321837 None:intergenic
AGAAATGCCACTGCCAGAAA+AGG 0.476227 3_3:-81322180 Msa0477150:intron
TATGGTTCCAAACCGATTAA+GGG 0.476894 3_3:-81321810 Msa0477150:CDS
CTTGTTCTAATTCCCTCCTA+AGG 0.478049 3_3:+81321471 None:intergenic
ATCACTCCGGCGATGTCTCT+GGG 0.478282 3_3:-81322219 Msa0477150:CDS
TGTTTACCACGGGAGACAGC+GGG 0.481273 3_3:+81322526 None:intergenic
AACGCTTCTATCGCCGGTGA+TGG 0.481498 3_3:+81322339 None:intergenic
CAGGGGTTGCATTTGGATTG+CGG 0.482525 3_3:+81322956 None:intergenic
GAGTCCCGTGCATAAGTTCA+AGG 0.483185 3_3:-81321872 Msa0477150:CDS
TTCAATGACGGCGATGAAAG+AGG 0.483268 3_3:+81322256 None:intergenic
ATAATTCTGGTTCAGGTTCA+GGG 0.485370 3_3:-81321528 Msa0477150:CDS
CGCCGGTGATGGCGGAGGAT+AGG 0.488781 3_3:+81322737 None:intergenic
TTGGGGCTTGATTATGAAGC+TGG 0.489027 3_3:+81321560 None:intergenic
GGTGTAATGGCCGGTGATGG+GGG 0.493480 3_3:+81322471 None:intergenic
AGTGTTTCCAATGGCAGACT+TGG 0.497101 3_3:-81322709 Msa0477150:CDS
TGGTGGAGGTGGCTGAGTAG+AGG 0.497676 3_3:+81322900 None:intergenic
CTGGTTCAGGTTCAGGGAGT+GGG 0.498298 3_3:-81321522 Msa0477150:CDS
GCCTTTACGGTGGAGTAAGT+TGG 0.499407 3_3:+81322993 None:intergenic
AGTGTCTCCAATGGCAGGCT+AGG 0.503100 3_3:-81322580 Msa0477150:CDS
AGATGGACCAAGTCTGCCAT+TGG 0.504301 3_3:+81322702 None:intergenic
ATTGGAAACACTGGCTTCGC+CGG 0.506348 3_3:+81322450 None:intergenic
AGCTAGGAAAAGGGTGGAGA+AGG 0.508533 3_3:-81321638 Msa0477150:CDS
TGAATTTGAAGTGGTGGTGG+TGG 0.508665 3_3:+81322883 None:intergenic
TCTGGTTCAGGTTCAGGGAG+TGG 0.509914 3_3:-81321523 Msa0477150:CDS
GTGTTTGAGCTAACCTTAGG+AGG 0.513166 3_3:-81321484 Msa0477150:CDS
GATGACATGAATGATGAGTT+AGG 0.513463 3_3:+81322634 None:intergenic
ATAGAAGCGTTTCCAGCGGC+AGG 0.515749 3_3:-81322327 Msa0477150:CDS
GGCTTCGCCGGTGTAATGGC+CGG 0.516112 3_3:+81322462 None:intergenic
ATGGTAGATGGCATTGGACA+TGG 0.516657 3_3:+81322556 None:intergenic
TGAAAGAGGTGGTTTACGGC+TGG 0.519384 3_3:+81322657 None:intergenic
TTTGTGGCAGCGGTTGATCA+GGG 0.520203 3_3:+81322938 None:intergenic
ACATGGACCTAGCCTGCCAT+TGG 0.522173 3_3:+81322573 None:intergenic
AGGTTCAGGGAGTGGGAGCA+TGG 0.522327 3_3:-81321515 Msa0477150:CDS
AGATGGACCGATCCTGCCGC+TGG 0.527015 3_3:+81322315 None:intergenic
AGTGTTTCCAATGGCAGACT+AGG 0.528173 3_3:-81322439 Msa0477150:CDS
CACCAGAGACAGCAGGGGTG+AGG 0.529492 3_3:+81322287 None:intergenic
GTTTACGGCTGGAGACAGCA+GGG 0.529825 3_3:+81322668 None:intergenic
GCCGTCGCCGGTGATGGCGG+AGG 0.529845 3_3:+81322732 None:intergenic
GGAGTGGAAGTTTGTGGCAG+CGG 0.530182 3_3:+81322928 None:intergenic
TTCATGTCCTCCGCCATCAC+CGG 0.530650 3_3:-81322352 Msa0477150:CDS
ATTGGAAACACTGCCGTCGC+CGG 0.530836 3_3:+81322720 None:intergenic
ACGGCAGTGTCTCCAATGGC+AGG 0.531858 3_3:-81322585 Msa0477150:CDS
GAAGGGGTGAGGAGTGGAGA+TGG 0.533512 3_3:+81322415 None:intergenic
GCTGGAAACGCTTCTATCGC+CGG 0.535199 3_3:+81322333 None:intergenic
ATCATCAGTCACCTTGGATG+TGG 0.536621 3_3:+81321783 None:intergenic
AGCGTTTCCAGCGGCAGGAT+CGG 0.536745 3_3:-81322322 Msa0477150:CDS
CTCCTATCCTCCGCCATCAC+CGG 0.540008 3_3:-81322739 Msa0477150:CDS
ATGGCGGAGGATAGGAGTGA+TGG 0.540988 3_3:+81322745 None:intergenic
ACCAGAGACAGCAGGGGTGA+GGG 0.543631 3_3:+81322288 None:intergenic
CCCATCACCGGCCATTACAC+CGG 0.545382 3_3:-81322469 Msa0477150:CDS
GTTTACCACGGGAGATAGAA+GGG 0.547446 3_3:+81322398 None:intergenic
TCTATCGCCGGTGATGGCGG+AGG 0.548144 3_3:+81322345 None:intergenic
ATTGGAGACACTGCCGTCGC+CGG 0.548673 3_3:+81322591 None:intergenic
GTGGGGATGGTAGATGGCAT+TGG 0.549661 3_3:+81322550 None:intergenic
AGATGGTCCTAGTCTGCCAT+TGG 0.550295 3_3:+81322432 None:intergenic
GGTGGCTGAGTAGAGGTGGA+GGG 0.555049 3_3:+81322907 None:intergenic
AATGATGAGTTAGGTGAAAG+AGG 0.558263 3_3:+81322643 None:intergenic
GATTGCGGCGGAAGCGAGCG+TGG 0.558913 3_3:+81322971 None:intergenic
GGAGGAATTTGAATTTGAAG+TGG 0.561033 3_3:+81322874 None:intergenic
ACTGCCGTCGCCGGTGATGG+CGG 0.561235 3_3:+81322729 None:intergenic
GGTTTACCACCAGAGACAGC+AGG 0.565359 3_3:+81322280 None:intergenic
GGAATTTGAATTTGAAGTGG+TGG 0.567821 3_3:+81322877 None:intergenic
TCCTCCGCCATCACCGGCGA+CGG 0.570163 3_3:-81322733 Msa0477150:CDS
ATTTGAATTTGAAGTGGTGG+TGG 0.570309 3_3:+81322880 None:intergenic
GCTTCTATCGCCGGTGATGG+CGG 0.573163 3_3:+81322342 None:intergenic
TAGTCTGCCATTGGAAACAC+TGG 0.574513 3_3:+81322441 None:intergenic
GCCGGTGATATCGCGAGCAA+AGG 0.576295 3_3:+81322609 None:intergenic
CACGGGAGATAGAAGGGGTG+AGG 0.577389 3_3:+81322404 None:intergenic
GGTTGGTTATGGCTCTTAGG+AGG 0.578662 3_3:+81322856 None:intergenic
AAATTGTCCAGCTAGGAAAA+GGG 0.578813 3_3:-81321647 Msa0477150:CDS
CTGTTTACCACGGGAGACAG+CGG 0.579258 3_3:+81322525 None:intergenic
TCCAACTTACTCCACCGTAA+AGG 0.584686 3_3:-81322994 Msa0477150:CDS
GTAAGTTGGATAGTTTCTTG+AGG 0.588388 3_3:+81323007 None:intergenic
AGCGAGCGTGGCCTTTACGG+TGG 0.596751 3_3:+81322983 None:intergenic
TTGTGGCAGCGGTTGATCAG+GGG 0.597446 3_3:+81322939 None:intergenic
CTCACCCCTGCTGTCTCTGG+TGG 0.599307 3_3:-81322286 Msa0477150:CDS
GCAGGGGTGAGGGTATAAGA+TGG 0.600551 3_3:+81322298 None:intergenic
GAGGTCTGAAACAGTGATGT+TGG 0.600896 3_3:+81323026 None:intergenic
CAATCCTTGAACTTATGCAC+GGG 0.601760 3_3:+81321868 None:intergenic
GCCTTTGCTCGCGATATCAC+CGG 0.603472 3_3:-81322610 Msa0477150:CDS
AATGGTGAGATAGAAGAAAG+AGG 0.604400 3_3:+81322502 None:intergenic
GCAGTGGCATTTCTTAGATG+CGG 0.605629 3_3:+81322189 None:intergenic
AGAAAGAGGCTGTTTACCAC+GGG 0.608993 3_3:+81322516 None:intergenic
GCAGGGGTGAGAATTTGAGA+TGG 0.611517 3_3:+81322685 None:intergenic
GGCGAAGCCAGTGTTTCCAA+TGG 0.611891 3_3:-81322448 Msa0477150:CDS
TTTACCACGGGAGACAGCGG+GGG 0.612657 3_3:+81322528 None:intergenic
GCTCGCGATATCACCGGCGA+CGG 0.612885 3_3:-81322604 Msa0477150:CDS
GTGGCATTTCTTAGATGCGG+AGG 0.615532 3_3:+81322192 None:intergenic
GTTTACCACCAGAGACAGCA+GGG 0.616141 3_3:+81322281 None:intergenic
TGTAAGAGGCTGTTTACCAC+GGG 0.617465 3_3:+81322387 None:intergenic
GGCGACGGCAGTGTCTCCAA+TGG 0.618204 3_3:-81322589 Msa0477150:CDS
AGAATTATTCTCTTGCATTG+GGG 0.619176 3_3:+81321543 None:intergenic
GTTTACCACGGGAGACAGCG+GGG 0.620522 3_3:+81322527 None:intergenic
GAAAACTAAATGTTTCCTTG+GGG 0.621149 3_3:+81322767 None:intergenic
GCAATCCTTGAACTTATGCA+CGG 0.621816 3_3:+81321867 None:intergenic
AAGAAAGAGGCTGTTTACCA+CGG 0.623906 3_3:+81322515 None:intergenic
ATATTAGAAACTGCCACACA+AGG 0.629159 3_3:-81323117 Msa0477150:CDS
TTAAGGGAACACCACATCCA+AGG 0.631610 3_3:-81321794 Msa0477150:intron
TGTTTGAGCTAACCTTAGGA+GGG 0.631673 3_3:-81321483 Msa0477150:CDS
ATGTAAGAGGCTGTTTACCA+CGG 0.635354 3_3:+81322386 None:intergenic
GGCGACGGCAGTGTTTCCAA+TGG 0.643275 3_3:-81322718 Msa0477150:CDS
CTCACCCCTTCTATCTCCCG+TGG 0.644664 3_3:-81322403 Msa0477150:CDS
GATGAGTTAGGTGAAAGAGG+TGG 0.645788 3_3:+81322646 None:intergenic
AAAAGCTGTCACAATCACTC+CGG 0.649448 3_3:-81322232 Msa0477150:CDS
TTGTCCAGCTAGGAAAAGGG+TGG 0.652692 3_3:-81321644 Msa0477150:CDS
GGCGATAGAAGCGTTTCCAG+CGG 0.654727 3_3:-81322331 Msa0477150:CDS
AAGTGAGTTTAAGCCTTGTG+TGG 0.663342 3_3:+81323104 None:intergenic
CTTAGATCTAGAAATCCCCA+AGG 0.682048 3_3:-81322782 Msa0477150:CDS
GGGTTGCATTTGGATTGCGG+CGG 0.683767 3_3:+81322959 None:intergenic
AATGACGGCGATGAAAGAGG+CGG 0.684940 3_3:+81322259 None:intergenic
TTTACCACGGGAGATAGAAG+GGG 0.691554 3_3:+81322399 None:intergenic
GGGCTTGATTATGAAGCTGG+TGG 0.693764 3_3:+81321563 None:intergenic
TTTACGGCTGGAGACAGCAG+GGG 0.699326 3_3:+81322669 None:intergenic
TTTACCACCAGAGACAGCAG+GGG 0.764702 3_3:+81322282 None:intergenic
CAGCAGATGAGTATTCATGG+AGG 0.765821 3_3:-81321836 Msa0477150:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTTTGATTTTATTTTTTTT+AGG - chr3_3:81322728-81322747 Msa0477150:CDS 10.0%
!!! TTATTTTTTTTAGGAAAAAT+CGG - chr3_3:81322737-81322756 Msa0477150:CDS 10.0%
!!! GTTTTGATTTTATTTTTTTT+AGG - chr3_3:81322728-81322747 Msa0477150:CDS 10.0%
!!! TTATTTTTTTTAGGAAAAAT+CGG - chr3_3:81322737-81322756 Msa0477150:CDS 10.0%
!!! TAAATTAATTTTACCTTTTC+TGG + chr3_3:81322484-81322503 None:intergenic 15.0%
!! TAAATGACAAATAAAATATG+CGG + chr3_3:81322642-81322661 None:intergenic 15.0%
!! ATTTATTTGAATATGGTAAA+AGG - chr3_3:81322904-81322923 Msa0477150:CDS 15.0%
!!! TAAATTAATTTTACCTTTTC+TGG + chr3_3:81322484-81322503 None:intergenic 15.0%
!! TAAATGACAAATAAAATATG+CGG + chr3_3:81322642-81322661 None:intergenic 15.0%
!! ATTTATTTGAATATGGTAAA+AGG - chr3_3:81322904-81322923 Msa0477150:CDS 15.0%
!! AAATGACAAATAAAATATGC+GGG + chr3_3:81322641-81322660 None:intergenic 20.0%
!! ACCATATTCAAATAAATCAA+CGG + chr3_3:81322901-81322920 None:intergenic 20.0%
!!! TGTTTTGTTTTGTTTATTTC+AGG - chr3_3:81322952-81322971 Msa0477150:CDS 20.0%
!!! GTTTTGTTTTGTTTATTTCA+GGG - chr3_3:81322953-81322972 Msa0477150:CDS 20.0%
!!! TTTTGTTTTGTTTATTTCAG+GGG - chr3_3:81322954-81322973 Msa0477150:CDS 20.0%
!! AAATGACAAATAAAATATGC+GGG + chr3_3:81322641-81322660 None:intergenic 20.0%
!! ACCATATTCAAATAAATCAA+CGG + chr3_3:81322901-81322920 None:intergenic 20.0%
!!! TGTTTTGTTTTGTTTATTTC+AGG - chr3_3:81322952-81322971 Msa0477150:CDS 20.0%
!!! GTTTTGTTTTGTTTATTTCA+GGG - chr3_3:81322953-81322972 Msa0477150:CDS 20.0%
!!! TTTTGTTTTGTTTATTTCAG+GGG - chr3_3:81322954-81322973 Msa0477150:CDS 20.0%
! TTAGTAAAATCGAGAGTTAA+AGG + chr3_3:81321816-81321835 None:intergenic 25.0%
! TTTCTAGATCTAAGGATTTA+GGG + chr3_3:81321860-81321879 None:intergenic 25.0%
!! ATTTCTAGATCTAAGGATTT+AGG + chr3_3:81321861-81321880 None:intergenic 25.0%
! TGTTAATAGTCAACATTCAT+TGG - chr3_3:81322515-81322534 Msa0477150:CDS 25.0%
! AATGACAAATAAAATATGCG+GGG + chr3_3:81322640-81322659 None:intergenic 25.0%
! GGTAAAAGGAATGTTTAATA+AGG - chr3_3:81322918-81322937 Msa0477150:CDS 25.0%
! TTTATTTCAGGGGTTATTAT+AGG - chr3_3:81322964-81322983 Msa0477150:CDS 25.0%
! TACGTTACAACTAGTATATT+TGG + chr3_3:81323047-81323066 None:intergenic 25.0%
! TTAGTAAAATCGAGAGTTAA+AGG + chr3_3:81321816-81321835 None:intergenic 25.0%
! TTTCTAGATCTAAGGATTTA+GGG + chr3_3:81321860-81321879 None:intergenic 25.0%
!! ATTTCTAGATCTAAGGATTT+AGG + chr3_3:81321861-81321880 None:intergenic 25.0%
! TGTTAATAGTCAACATTCAT+TGG - chr3_3:81322515-81322534 Msa0477150:CDS 25.0%
! AATGACAAATAAAATATGCG+GGG + chr3_3:81322640-81322659 None:intergenic 25.0%
! GGTAAAAGGAATGTTTAATA+AGG - chr3_3:81322918-81322937 Msa0477150:CDS 25.0%
! TTTATTTCAGGGGTTATTAT+AGG - chr3_3:81322964-81322983 Msa0477150:CDS 25.0%
! TACGTTACAACTAGTATATT+TGG + chr3_3:81323047-81323066 None:intergenic 25.0%
!!! ATTGATGGATTTTCCAAACA+TGG - chr3_3:81321488-81321507 Msa0477150:CDS 30.0%
TAAAATCGAGAGTTAAAGGT+TGG + chr3_3:81321812-81321831 None:intergenic 30.0%
! GGATTTAGGGTTAGATTTAA+AGG + chr3_3:81321847-81321866 None:intergenic 30.0%
GAAAACTAAATGTTTCCTTG+GGG + chr3_3:81321884-81321903 None:intergenic 30.0%
GGAAAACTAAATGTTTCCTT+GGG + chr3_3:81321885-81321904 None:intergenic 30.0%
TGGAAAACTAAATGTTTCCT+TGG + chr3_3:81321886-81321905 None:intergenic 30.0%
AAAGATGAGTAAGATGTAAG+AGG + chr3_3:81322278-81322297 None:intergenic 30.0%
!! TTTTTAGGAAAAATCGGAAC+AGG - chr3_3:81322743-81322762 Msa0477150:CDS 30.0%
!! GCCGTTGATTTATTTGAATA+TGG - chr3_3:81322897-81322916 Msa0477150:CDS 30.0%
AGAATTATTCTCTTGCATTG+GGG + chr3_3:81323108-81323127 None:intergenic 30.0%
CAGAATTATTCTCTTGCATT+GGG + chr3_3:81323109-81323128 None:intergenic 30.0%
!!! ATTGATGGATTTTCCAAACA+TGG - chr3_3:81321488-81321507 Msa0477150:CDS 30.0%
TAAAATCGAGAGTTAAAGGT+TGG + chr3_3:81321812-81321831 None:intergenic 30.0%
! GGATTTAGGGTTAGATTTAA+AGG + chr3_3:81321847-81321866 None:intergenic 30.0%
GAAAACTAAATGTTTCCTTG+GGG + chr3_3:81321884-81321903 None:intergenic 30.0%
GGAAAACTAAATGTTTCCTT+GGG + chr3_3:81321885-81321904 None:intergenic 30.0%
TGGAAAACTAAATGTTTCCT+TGG + chr3_3:81321886-81321905 None:intergenic 30.0%
AAAGATGAGTAAGATGTAAG+AGG + chr3_3:81322278-81322297 None:intergenic 30.0%
!! TTTTTAGGAAAAATCGGAAC+AGG - chr3_3:81322743-81322762 Msa0477150:CDS 30.0%
!! GCCGTTGATTTATTTGAATA+TGG - chr3_3:81322897-81322916 Msa0477150:CDS 30.0%
AGAATTATTCTCTTGCATTG+GGG + chr3_3:81323108-81323127 None:intergenic 30.0%
CAGAATTATTCTCTTGCATT+GGG + chr3_3:81323109-81323128 None:intergenic 30.0%
! TCTTTTTCCTCATCCATGTT+TGG + chr3_3:81321504-81321523 None:intergenic 35.0%
CATGGATGAGGAAAAAGAAA+AGG - chr3_3:81321506-81321525 Msa0477150:CDS 35.0%
ATATTAGAAACTGCCACACA+AGG - chr3_3:81321531-81321550 Msa0477150:CDS 35.0%
AGAGACATTATTAGCGAAGT+TGG + chr3_3:81321571-81321590 None:intergenic 35.0%
!!! AGTTCAGTGTTTTGAAGAGA+GGG + chr3_3:81321600-81321619 None:intergenic 35.0%
!!! AAGTTCAGTGTTTTGAAGAG+AGG + chr3_3:81321601-81321620 None:intergenic 35.0%
! GTAAGTTGGATAGTTTCTTG+AGG + chr3_3:81321644-81321663 None:intergenic 35.0%
! ATTTGAATTTGAAGTGGTGG+TGG + chr3_3:81321771-81321790 None:intergenic 35.0%
! GGAATTTGAATTTGAAGTGG+TGG + chr3_3:81321774-81321793 None:intergenic 35.0%
GGAGGAATTTGAATTTGAAG+TGG + chr3_3:81321777-81321796 None:intergenic 35.0%
! GGGTTAGATTTAAAGGTGTA+AGG + chr3_3:81321840-81321859 None:intergenic 35.0%
AATGATGAGTTAGGTGAAAG+AGG + chr3_3:81322008-81322027 None:intergenic 35.0%
GATGACATGAATGATGAGTT+AGG + chr3_3:81322017-81322036 None:intergenic 35.0%
AATGGTGAGATAGAAGAAAG+AGG + chr3_3:81322149-81322168 None:intergenic 35.0%
! TGACAGCTTTTCTTCAATGA+CGG + chr3_3:81322407-81322426 None:intergenic 35.0%
!! AATTTTACCTTTTCTGGCAG+TGG + chr3_3:81322478-81322497 None:intergenic 35.0%
TAGTCAACATTCATTGGTCA+CGG - chr3_3:81322521-81322540 Msa0477150:CDS 35.0%
CGTTTGTCGTAAAAAAGACA+AGG - chr3_3:81322586-81322605 Msa0477150:CDS 35.0%
TATGGTTCCAAACCGATTAA+GGG - chr3_3:81322838-81322857 Msa0477150:CDS 35.0%
AAATCAATCATCAGTCACCT+TGG + chr3_3:81322874-81322893 None:intergenic 35.0%
TGTCTAAAAATTGTCCAGCT+AGG - chr3_3:81322994-81323013 Msa0477150:CDS 35.0%
AAAATTGTCCAGCTAGGAAA+AGG - chr3_3:81323000-81323019 Msa0477150:CDS 35.0%
AAATTGTCCAGCTAGGAAAA+GGG - chr3_3:81323001-81323020 Msa0477150:CDS 35.0%
CCAGAATTATTCTCTTGCAT+TGG + chr3_3:81323110-81323129 None:intergenic 35.0%
CCAATGCAAGAGAATAATTC+TGG - chr3_3:81323107-81323126 Msa0477150:CDS 35.0%
!! CAAGAGAATAATTCTGGTTC+AGG - chr3_3:81323113-81323132 Msa0477150:CDS 35.0%
!! AATAATTCTGGTTCAGGTTC+AGG - chr3_3:81323119-81323138 Msa0477150:CDS 35.0%
!! ATAATTCTGGTTCAGGTTCA+GGG - chr3_3:81323120-81323139 Msa0477150:CDS 35.0%
! TCTTTTTCCTCATCCATGTT+TGG + chr3_3:81321504-81321523 None:intergenic 35.0%
CATGGATGAGGAAAAAGAAA+AGG - chr3_3:81321506-81321525 Msa0477150:CDS 35.0%
ATATTAGAAACTGCCACACA+AGG - chr3_3:81321531-81321550 Msa0477150:CDS 35.0%
AGAGACATTATTAGCGAAGT+TGG + chr3_3:81321571-81321590 None:intergenic 35.0%
!!! AGTTCAGTGTTTTGAAGAGA+GGG + chr3_3:81321600-81321619 None:intergenic 35.0%
!!! AAGTTCAGTGTTTTGAAGAG+AGG + chr3_3:81321601-81321620 None:intergenic 35.0%
! GTAAGTTGGATAGTTTCTTG+AGG + chr3_3:81321644-81321663 None:intergenic 35.0%
! ATTTGAATTTGAAGTGGTGG+TGG + chr3_3:81321771-81321790 None:intergenic 35.0%
! GGAATTTGAATTTGAAGTGG+TGG + chr3_3:81321774-81321793 None:intergenic 35.0%
GGAGGAATTTGAATTTGAAG+TGG + chr3_3:81321777-81321796 None:intergenic 35.0%
! GGGTTAGATTTAAAGGTGTA+AGG + chr3_3:81321840-81321859 None:intergenic 35.0%
AATGATGAGTTAGGTGAAAG+AGG + chr3_3:81322008-81322027 None:intergenic 35.0%
GATGACATGAATGATGAGTT+AGG + chr3_3:81322017-81322036 None:intergenic 35.0%
AATGGTGAGATAGAAGAAAG+AGG + chr3_3:81322149-81322168 None:intergenic 35.0%
! TGACAGCTTTTCTTCAATGA+CGG + chr3_3:81322407-81322426 None:intergenic 35.0%
!! AATTTTACCTTTTCTGGCAG+TGG + chr3_3:81322478-81322497 None:intergenic 35.0%
TAGTCAACATTCATTGGTCA+CGG - chr3_3:81322521-81322540 Msa0477150:CDS 35.0%
CGTTTGTCGTAAAAAAGACA+AGG - chr3_3:81322586-81322605 Msa0477150:CDS 35.0%
TATGGTTCCAAACCGATTAA+GGG - chr3_3:81322838-81322857 Msa0477150:CDS 35.0%
AAATCAATCATCAGTCACCT+TGG + chr3_3:81322874-81322893 None:intergenic 35.0%
TGTCTAAAAATTGTCCAGCT+AGG - chr3_3:81322994-81323013 Msa0477150:CDS 35.0%
AAAATTGTCCAGCTAGGAAA+AGG - chr3_3:81323000-81323019 Msa0477150:CDS 35.0%
AAATTGTCCAGCTAGGAAAA+GGG - chr3_3:81323001-81323020 Msa0477150:CDS 35.0%
CCAGAATTATTCTCTTGCAT+TGG + chr3_3:81323110-81323129 None:intergenic 35.0%
CCAATGCAAGAGAATAATTC+TGG - chr3_3:81323107-81323126 Msa0477150:CDS 35.0%
!! CAAGAGAATAATTCTGGTTC+AGG - chr3_3:81323113-81323132 Msa0477150:CDS 35.0%
!! AATAATTCTGGTTCAGGTTC+AGG - chr3_3:81323119-81323138 Msa0477150:CDS 35.0%
!! ATAATTCTGGTTCAGGTTCA+GGG - chr3_3:81323120-81323139 Msa0477150:CDS 35.0%
! GGATTTTCCAAACATGGATG+AGG - chr3_3:81321494-81321513 Msa0477150:CDS 40.0%
! AAGTGAGTTTAAGCCTTGTG+TGG + chr3_3:81321547-81321566 None:intergenic 40.0%
!!! AGTGTTTTGAAGAGAGGGTT+GGG + chr3_3:81321595-81321614 None:intergenic 40.0%
! AAAGGTTGGTTATGGCTCTT+AGG + chr3_3:81321798-81321817 None:intergenic 40.0%
! CGAGAGTTAAAGGTTGGTTA+TGG + chr3_3:81321806-81321825 None:intergenic 40.0%
! CTTGGGGATTTCTAGATCTA+AGG + chr3_3:81321868-81321887 None:intergenic 40.0%
CTTAGATCTAGAAATCCCCA+AGG - chr3_3:81321866-81321885 Msa0477150:CDS 40.0%
TAGGTGAAAGAGGTGGTTTA+CGG + chr3_3:81321998-81322017 None:intergenic 40.0%
AAGAAAGAGGCTGTTTACCA+CGG + chr3_3:81322136-81322155 None:intergenic 40.0%
ATGTAAGAGGCTGTTTACCA+CGG + chr3_3:81322265-81322284 None:intergenic 40.0%
AAAAGCTGTCACAATCACTC+CGG - chr3_3:81322416-81322435 Msa0477150:CDS 40.0%
CAATCCTTGAACTTATGCAC+GGG + chr3_3:81322783-81322802 None:intergenic 40.0%
GCAATCCTTGAACTTATGCA+CGG + chr3_3:81322784-81322803 None:intergenic 40.0%
TACCAGCAGATGAGTATTCA+TGG - chr3_3:81322809-81322828 Msa0477150:CDS 40.0%
GAGTATTCATGGAGGAAGTA+TGG - chr3_3:81322820-81322839 Msa0477150:CDS 40.0%
GTATGGTTCCAAACCGATTA+AGG - chr3_3:81322837-81322856 Msa0477150:CDS 40.0%
TGTTTGAGCTAACCTTAGGA+GGG - chr3_3:81323165-81323184 Msa0477150:CDS 40.0%
! GGATTTTCCAAACATGGATG+AGG - chr3_3:81321494-81321513 Msa0477150:CDS 40.0%
! AAGTGAGTTTAAGCCTTGTG+TGG + chr3_3:81321547-81321566 None:intergenic 40.0%
!!! AGTGTTTTGAAGAGAGGGTT+GGG + chr3_3:81321595-81321614 None:intergenic 40.0%
! AAAGGTTGGTTATGGCTCTT+AGG + chr3_3:81321798-81321817 None:intergenic 40.0%
! CGAGAGTTAAAGGTTGGTTA+TGG + chr3_3:81321806-81321825 None:intergenic 40.0%
! CTTGGGGATTTCTAGATCTA+AGG + chr3_3:81321868-81321887 None:intergenic 40.0%
CTTAGATCTAGAAATCCCCA+AGG - chr3_3:81321866-81321885 Msa0477150:CDS 40.0%
TAGGTGAAAGAGGTGGTTTA+CGG + chr3_3:81321998-81322017 None:intergenic 40.0%
AAGAAAGAGGCTGTTTACCA+CGG + chr3_3:81322136-81322155 None:intergenic 40.0%
ATGTAAGAGGCTGTTTACCA+CGG + chr3_3:81322265-81322284 None:intergenic 40.0%
AAAAGCTGTCACAATCACTC+CGG - chr3_3:81322416-81322435 Msa0477150:CDS 40.0%
CAATCCTTGAACTTATGCAC+GGG + chr3_3:81322783-81322802 None:intergenic 40.0%
GCAATCCTTGAACTTATGCA+CGG + chr3_3:81322784-81322803 None:intergenic 40.0%
TACCAGCAGATGAGTATTCA+TGG - chr3_3:81322809-81322828 Msa0477150:CDS 40.0%
GAGTATTCATGGAGGAAGTA+TGG - chr3_3:81322820-81322839 Msa0477150:CDS 40.0%
GTATGGTTCCAAACCGATTA+AGG - chr3_3:81322837-81322856 Msa0477150:CDS 40.0%
TGTTTGAGCTAACCTTAGGA+GGG - chr3_3:81323165-81323184 Msa0477150:CDS 40.0%
!!! GTGTTTTGAAGAGAGGGTTG+GGG + chr3_3:81321594-81321613 None:intergenic 45.0%
!!! CAGTGTTTTGAAGAGAGGGT+TGG + chr3_3:81321596-81321615 None:intergenic 45.0%
! GAGGTCTGAAACAGTGATGT+TGG + chr3_3:81321625-81321644 None:intergenic 45.0%
TCCAACTTACTCCACCGTAA+AGG - chr3_3:81321654-81321673 Msa0477150:CDS 45.0%
!! TGAATTTGAAGTGGTGGTGG+TGG + chr3_3:81321768-81321787 None:intergenic 45.0%
AGTGTTTCCAATGGCAGACT+TGG - chr3_3:81321939-81321958 Msa0477150:intron 45.0%
GATGAGTTAGGTGAAAGAGG+TGG + chr3_3:81322005-81322024 None:intergenic 45.0%
! ATGGTAGATGGCATTGGACA+TGG + chr3_3:81322095-81322114 None:intergenic 45.0%
AGAAAGAGGCTGTTTACCAC+GGG + chr3_3:81322135-81322154 None:intergenic 45.0%
TAGTCTGCCATTGGAAACAC+TGG + chr3_3:81322210-81322229 None:intergenic 45.0%
AGTGTTTCCAATGGCAGACT+AGG - chr3_3:81321939-81321958 Msa0477150:intron 45.0%
TTTACCACGGGAGATAGAAG+GGG + chr3_3:81322252-81322271 None:intergenic 45.0%
GTTTACCACGGGAGATAGAA+GGG + chr3_3:81322253-81322272 None:intergenic 45.0%
TGTTTACCACGGGAGATAGA+AGG + chr3_3:81322254-81322273 None:intergenic 45.0%
TGTAAGAGGCTGTTTACCAC+GGG + chr3_3:81322264-81322283 None:intergenic 45.0%
TTCAATGACGGCGATGAAAG+AGG + chr3_3:81322395-81322414 None:intergenic 45.0%
GCAGTGGCATTTCTTAGATG+CGG + chr3_3:81322462-81322481 None:intergenic 45.0%
AGAAATGCCACTGCCAGAAA+AGG - chr3_3:81322468-81322487 Msa0477150:CDS 45.0%
CTCCATGAATACTCATCTGC+TGG + chr3_3:81322814-81322833 None:intergenic 45.0%
CAGCAGATGAGTATTCATGG+AGG - chr3_3:81322812-81322831 Msa0477150:CDS 45.0%
TGGTGTTCCCTTAATCGGTT+TGG + chr3_3:81322848-81322867 None:intergenic 45.0%
GGATGTGGTGTTCCCTTAAT+CGG + chr3_3:81322853-81322872 None:intergenic 45.0%
TTAAGGGAACACCACATCCA+AGG - chr3_3:81322854-81322873 Msa0477150:CDS 45.0%
ATCATCAGTCACCTTGGATG+TGG + chr3_3:81322868-81322887 None:intergenic 45.0%
TTGGGGCTTGATTATGAAGC+TGG + chr3_3:81323091-81323110 None:intergenic 45.0%
GTGTTTGAGCTAACCTTAGG+AGG - chr3_3:81323164-81323183 Msa0477150:CDS 45.0%
!!! GTGTTTTGAAGAGAGGGTTG+GGG + chr3_3:81321594-81321613 None:intergenic 45.0%
!!! CAGTGTTTTGAAGAGAGGGT+TGG + chr3_3:81321596-81321615 None:intergenic 45.0%
! GAGGTCTGAAACAGTGATGT+TGG + chr3_3:81321625-81321644 None:intergenic 45.0%
TCCAACTTACTCCACCGTAA+AGG - chr3_3:81321654-81321673 Msa0477150:CDS 45.0%
!! TGAATTTGAAGTGGTGGTGG+TGG + chr3_3:81321768-81321787 None:intergenic 45.0%
AGTGTTTCCAATGGCAGACT+TGG - chr3_3:81321939-81321958 Msa0477150:intron 45.0%
GATGAGTTAGGTGAAAGAGG+TGG + chr3_3:81322005-81322024 None:intergenic 45.0%
! ATGGTAGATGGCATTGGACA+TGG + chr3_3:81322095-81322114 None:intergenic 45.0%
AGAAAGAGGCTGTTTACCAC+GGG + chr3_3:81322135-81322154 None:intergenic 45.0%
TAGTCTGCCATTGGAAACAC+TGG + chr3_3:81322210-81322229 None:intergenic 45.0%
AGTGTTTCCAATGGCAGACT+AGG - chr3_3:81321939-81321958 Msa0477150:intron 45.0%
TTTACCACGGGAGATAGAAG+GGG + chr3_3:81322252-81322271 None:intergenic 45.0%
GTTTACCACGGGAGATAGAA+GGG + chr3_3:81322253-81322272 None:intergenic 45.0%
TGTTTACCACGGGAGATAGA+AGG + chr3_3:81322254-81322273 None:intergenic 45.0%
TGTAAGAGGCTGTTTACCAC+GGG + chr3_3:81322264-81322283 None:intergenic 45.0%
TTCAATGACGGCGATGAAAG+AGG + chr3_3:81322395-81322414 None:intergenic 45.0%
GCAGTGGCATTTCTTAGATG+CGG + chr3_3:81322462-81322481 None:intergenic 45.0%
AGAAATGCCACTGCCAGAAA+AGG - chr3_3:81322468-81322487 Msa0477150:CDS 45.0%
CTCCATGAATACTCATCTGC+TGG + chr3_3:81322814-81322833 None:intergenic 45.0%
CAGCAGATGAGTATTCATGG+AGG - chr3_3:81322812-81322831 Msa0477150:CDS 45.0%
TGGTGTTCCCTTAATCGGTT+TGG + chr3_3:81322848-81322867 None:intergenic 45.0%
GGATGTGGTGTTCCCTTAAT+CGG + chr3_3:81322853-81322872 None:intergenic 45.0%
TTAAGGGAACACCACATCCA+AGG - chr3_3:81322854-81322873 Msa0477150:CDS 45.0%
ATCATCAGTCACCTTGGATG+TGG + chr3_3:81322868-81322887 None:intergenic 45.0%
TTGGGGCTTGATTATGAAGC+TGG + chr3_3:81323091-81323110 None:intergenic 45.0%
GTGTTTGAGCTAACCTTAGG+AGG - chr3_3:81323164-81323183 Msa0477150:CDS 45.0%
GCCTTTACGGTGGAGTAAGT+TGG + chr3_3:81321658-81321677 None:intergenic 50.0%
CAGGGGTTGCATTTGGATTG+CGG + chr3_3:81321695-81321714 None:intergenic 50.0%
GGTTGATCAGGGGTTGCATT+TGG + chr3_3:81321702-81321721 None:intergenic 50.0%
TTTGTGGCAGCGGTTGATCA+GGG + chr3_3:81321713-81321732 None:intergenic 50.0%
!! ATTTGAAGTGGTGGTGGTGG+AGG + chr3_3:81321765-81321784 None:intergenic 50.0%
! GGTTGGTTATGGCTCTTAGG+AGG + chr3_3:81321795-81321814 None:intergenic 50.0%
AGATGGACCAAGTCTGCCAT+TGG + chr3_3:81321949-81321968 None:intergenic 50.0%
GCAGGGGTGAGAATTTGAGA+TGG + chr3_3:81321966-81321985 None:intergenic 50.0%
TGAAAGAGGTGGTTTACGGC+TGG + chr3_3:81321994-81322013 None:intergenic 50.0%
!! ATTGGAAACACTGGCTTCGC+CGG + chr3_3:81322201-81322220 None:intergenic 50.0%
AGATGGTCCTAGTCTGCCAT+TGG + chr3_3:81322219-81322238 None:intergenic 50.0%
TTTACCACCAGAGACAGCAG+GGG + chr3_3:81322369-81322388 None:intergenic 50.0%
GTTTACCACCAGAGACAGCA+GGG + chr3_3:81322370-81322389 None:intergenic 50.0%
AATGACGGCGATGAAAGAGG+CGG + chr3_3:81322392-81322411 None:intergenic 50.0%
GTGGCATTTCTTAGATGCGG+AGG + chr3_3:81322459-81322478 None:intergenic 50.0%
GAGTCCCGTGCATAAGTTCA+AGG - chr3_3:81322776-81322795 Msa0477150:CDS 50.0%
TTGTCCAGCTAGGAAAAGGG+TGG - chr3_3:81323004-81323023 Msa0477150:CDS 50.0%
! TTCTCCACCCTTTTCCTAGC+TGG + chr3_3:81323011-81323030 None:intergenic 50.0%
AGCTAGGAAAAGGGTGGAGA+AGG - chr3_3:81323010-81323029 Msa0477150:CDS 50.0%
GGGCTTGATTATGAAGCTGG+TGG + chr3_3:81323088-81323107 None:intergenic 50.0%
! GGGGTGTTTGAGCTAACCTT+AGG - chr3_3:81323161-81323180 Msa0477150:CDS 50.0%
GCCTTTACGGTGGAGTAAGT+TGG + chr3_3:81321658-81321677 None:intergenic 50.0%
CAGGGGTTGCATTTGGATTG+CGG + chr3_3:81321695-81321714 None:intergenic 50.0%
GGTTGATCAGGGGTTGCATT+TGG + chr3_3:81321702-81321721 None:intergenic 50.0%
TTTGTGGCAGCGGTTGATCA+GGG + chr3_3:81321713-81321732 None:intergenic 50.0%
!! ATTTGAAGTGGTGGTGGTGG+AGG + chr3_3:81321765-81321784 None:intergenic 50.0%
! GGTTGGTTATGGCTCTTAGG+AGG + chr3_3:81321795-81321814 None:intergenic 50.0%
AGATGGACCAAGTCTGCCAT+TGG + chr3_3:81321949-81321968 None:intergenic 50.0%
GCAGGGGTGAGAATTTGAGA+TGG + chr3_3:81321966-81321985 None:intergenic 50.0%
TGAAAGAGGTGGTTTACGGC+TGG + chr3_3:81321994-81322013 None:intergenic 50.0%
!! ATTGGAAACACTGGCTTCGC+CGG + chr3_3:81322201-81322220 None:intergenic 50.0%
AGATGGTCCTAGTCTGCCAT+TGG + chr3_3:81322219-81322238 None:intergenic 50.0%
TTTACCACCAGAGACAGCAG+GGG + chr3_3:81322369-81322388 None:intergenic 50.0%
GTTTACCACCAGAGACAGCA+GGG + chr3_3:81322370-81322389 None:intergenic 50.0%
AATGACGGCGATGAAAGAGG+CGG + chr3_3:81322392-81322411 None:intergenic 50.0%
GTGGCATTTCTTAGATGCGG+AGG + chr3_3:81322459-81322478 None:intergenic 50.0%
GAGTCCCGTGCATAAGTTCA+AGG - chr3_3:81322776-81322795 Msa0477150:CDS 50.0%
TTGTCCAGCTAGGAAAAGGG+TGG - chr3_3:81323004-81323023 Msa0477150:CDS 50.0%
! TTCTCCACCCTTTTCCTAGC+TGG + chr3_3:81323011-81323030 None:intergenic 50.0%
AGCTAGGAAAAGGGTGGAGA+AGG - chr3_3:81323010-81323029 Msa0477150:CDS 50.0%
GGGCTTGATTATGAAGCTGG+TGG + chr3_3:81323088-81323107 None:intergenic 50.0%
! GGGGTGTTTGAGCTAACCTT+AGG - chr3_3:81323161-81323180 Msa0477150:CDS 50.0%
GGGTTGCATTTGGATTGCGG+CGG + chr3_3:81321692-81321711 None:intergenic 55.0%
TTGTGGCAGCGGTTGATCAG+GGG + chr3_3:81321712-81321731 None:intergenic 55.0%
GTTTGTGGCAGCGGTTGATC+AGG + chr3_3:81321714-81321733 None:intergenic 55.0%
GGAGTGGAAGTTTGTGGCAG+CGG + chr3_3:81321723-81321742 None:intergenic 55.0%
GTGGAGGGAGTGGAAGTTTG+TGG + chr3_3:81321729-81321748 None:intergenic 55.0%
! ATGGCGGAGGATAGGAGTGA+TGG + chr3_3:81321906-81321925 None:intergenic 55.0%
ATTGGAAACACTGCCGTCGC+CGG + chr3_3:81321931-81321950 None:intergenic 55.0%
TTTACGGCTGGAGACAGCAG+GGG + chr3_3:81321982-81322001 None:intergenic 55.0%
GTTTACGGCTGGAGACAGCA+GGG + chr3_3:81321983-81322002 None:intergenic 55.0%
GCCTTTGCTCGCGATATCAC+CGG - chr3_3:81322038-81322057 Msa0477150:intron 55.0%
AGTGTCTCCAATGGCAGGCT+AGG - chr3_3:81322068-81322087 Msa0477150:intron 55.0%
ACATGGACCTAGCCTGCCAT+TGG + chr3_3:81322078-81322097 None:intergenic 55.0%
GTGGGGATGGTAGATGGCAT+TGG + chr3_3:81322101-81322120 None:intergenic 55.0%
TGTTTACCACGGGAGACAGC+GGG + chr3_3:81322125-81322144 None:intergenic 55.0%
CTGTTTACCACGGGAGACAG+CGG + chr3_3:81322126-81322145 None:intergenic 55.0%
! GTGATGGGGGAGGACATGAA+TGG + chr3_3:81322167-81322186 None:intergenic 55.0%
TTCATGTCCTCCCCCATCAC+CGG - chr3_3:81322167-81322186 Msa0477150:intron 55.0%
GGCGAAGCCAGTGTTTCCAA+TGG - chr3_3:81322200-81322219 Msa0477150:CDS 55.0%
GAGATAGAAGGGGTGAGGAG+TGG + chr3_3:81322242-81322261 None:intergenic 55.0%
TTCATGTCCTCCGCCATCAC+CGG - chr3_3:81322296-81322315 Msa0477150:CDS 55.0%
AACGCTTCTATCGCCGGTGA+TGG + chr3_3:81322312-81322331 None:intergenic 55.0%
GCTGGAAACGCTTCTATCGC+CGG + chr3_3:81322318-81322337 None:intergenic 55.0%
!! GGCGATAGAAGCGTTTCCAG+CGG - chr3_3:81322317-81322336 Msa0477150:CDS 55.0%
!! ATAGAAGCGTTTCCAGCGGC+AGG - chr3_3:81322321-81322340 Msa0477150:CDS 55.0%
! GCAGGGGTGAGGGTATAAGA+TGG + chr3_3:81322353-81322372 None:intergenic 55.0%
GGTTTACCACCAGAGACAGC+AGG + chr3_3:81322371-81322390 None:intergenic 55.0%
AATCACTCCGGCGATGTCTC+TGG - chr3_3:81322428-81322447 Msa0477150:CDS 55.0%
ATCACTCCGGCGATGTCTCT+GGG - chr3_3:81322429-81322448 Msa0477150:CDS 55.0%
! GGTTTTCCCAGAGACATCGC+CGG + chr3_3:81322438-81322457 None:intergenic 55.0%
! TCTGGTTCAGGTTCAGGGAG+TGG - chr3_3:81323125-81323144 Msa0477150:CDS 55.0%
! CTGGTTCAGGTTCAGGGAGT+GGG - chr3_3:81323126-81323145 Msa0477150:CDS 55.0%
! AGGGAGTGGGAGCATGGATT+TGG - chr3_3:81323139-81323158 Msa0477150:CDS 55.0%
! GGGAGTGGGAGCATGGATTT+GGG - chr3_3:81323140-81323159 Msa0477150:CDS 55.0%
! GGAGTGGGAGCATGGATTTG+GGG - chr3_3:81323141-81323160 Msa0477150:CDS 55.0%
! GAGTGGGAGCATGGATTTGG+GGG - chr3_3:81323142-81323161 Msa0477150:CDS 55.0%
GGGTTGCATTTGGATTGCGG+CGG + chr3_3:81321692-81321711 None:intergenic 55.0%
TTGTGGCAGCGGTTGATCAG+GGG + chr3_3:81321712-81321731 None:intergenic 55.0%
GTTTGTGGCAGCGGTTGATC+AGG + chr3_3:81321714-81321733 None:intergenic 55.0%
GGAGTGGAAGTTTGTGGCAG+CGG + chr3_3:81321723-81321742 None:intergenic 55.0%
GTGGAGGGAGTGGAAGTTTG+TGG + chr3_3:81321729-81321748 None:intergenic 55.0%
! ATGGCGGAGGATAGGAGTGA+TGG + chr3_3:81321906-81321925 None:intergenic 55.0%
ATTGGAAACACTGCCGTCGC+CGG + chr3_3:81321931-81321950 None:intergenic 55.0%
TTTACGGCTGGAGACAGCAG+GGG + chr3_3:81321982-81322001 None:intergenic 55.0%
GTTTACGGCTGGAGACAGCA+GGG + chr3_3:81321983-81322002 None:intergenic 55.0%
GCCTTTGCTCGCGATATCAC+CGG - chr3_3:81322038-81322057 Msa0477150:intron 55.0%
AGTGTCTCCAATGGCAGGCT+AGG - chr3_3:81322068-81322087 Msa0477150:intron 55.0%
ACATGGACCTAGCCTGCCAT+TGG + chr3_3:81322078-81322097 None:intergenic 55.0%
GTGGGGATGGTAGATGGCAT+TGG + chr3_3:81322101-81322120 None:intergenic 55.0%
TGTTTACCACGGGAGACAGC+GGG + chr3_3:81322125-81322144 None:intergenic 55.0%
CTGTTTACCACGGGAGACAG+CGG + chr3_3:81322126-81322145 None:intergenic 55.0%
! GTGATGGGGGAGGACATGAA+TGG + chr3_3:81322167-81322186 None:intergenic 55.0%
TTCATGTCCTCCCCCATCAC+CGG - chr3_3:81322167-81322186 Msa0477150:intron 55.0%
GGCGAAGCCAGTGTTTCCAA+TGG - chr3_3:81322200-81322219 Msa0477150:CDS 55.0%
GAGATAGAAGGGGTGAGGAG+TGG + chr3_3:81322242-81322261 None:intergenic 55.0%
TTCATGTCCTCCGCCATCAC+CGG - chr3_3:81322296-81322315 Msa0477150:CDS 55.0%
AACGCTTCTATCGCCGGTGA+TGG + chr3_3:81322312-81322331 None:intergenic 55.0%
GCTGGAAACGCTTCTATCGC+CGG + chr3_3:81322318-81322337 None:intergenic 55.0%
!! GGCGATAGAAGCGTTTCCAG+CGG - chr3_3:81322317-81322336 Msa0477150:CDS 55.0%
!! ATAGAAGCGTTTCCAGCGGC+AGG - chr3_3:81322321-81322340 Msa0477150:CDS 55.0%
! GCAGGGGTGAGGGTATAAGA+TGG + chr3_3:81322353-81322372 None:intergenic 55.0%
GGTTTACCACCAGAGACAGC+AGG + chr3_3:81322371-81322390 None:intergenic 55.0%
AATCACTCCGGCGATGTCTC+TGG - chr3_3:81322428-81322447 Msa0477150:CDS 55.0%
ATCACTCCGGCGATGTCTCT+GGG - chr3_3:81322429-81322448 Msa0477150:CDS 55.0%
! GGTTTTCCCAGAGACATCGC+CGG + chr3_3:81322438-81322457 None:intergenic 55.0%
! TCTGGTTCAGGTTCAGGGAG+TGG - chr3_3:81323125-81323144 Msa0477150:CDS 55.0%
! CTGGTTCAGGTTCAGGGAGT+GGG - chr3_3:81323126-81323145 Msa0477150:CDS 55.0%
! AGGGAGTGGGAGCATGGATT+TGG - chr3_3:81323139-81323158 Msa0477150:CDS 55.0%
! GGGAGTGGGAGCATGGATTT+GGG - chr3_3:81323140-81323159 Msa0477150:CDS 55.0%
! GGAGTGGGAGCATGGATTTG+GGG - chr3_3:81323141-81323160 Msa0477150:CDS 55.0%
! GAGTGGGAGCATGGATTTGG+GGG - chr3_3:81323142-81323161 Msa0477150:CDS 55.0%
GGAAGCGAGCGTGGCCTTTA+CGG + chr3_3:81321671-81321690 None:intergenic 60.0%
CTGAGTAGAGGTGGAGGGAG+TGG + chr3_3:81321739-81321758 None:intergenic 60.0%
GGTGGCTGAGTAGAGGTGGA+GGG + chr3_3:81321744-81321763 None:intergenic 60.0%
AGGTGGCTGAGTAGAGGTGG+AGG + chr3_3:81321745-81321764 None:intergenic 60.0%
TGGAGGTGGCTGAGTAGAGG+TGG + chr3_3:81321748-81321767 None:intergenic 60.0%
TGGTGGAGGTGGCTGAGTAG+AGG + chr3_3:81321751-81321770 None:intergenic 60.0%
!! TGAAGTGGTGGTGGTGGAGG+TGG + chr3_3:81321762-81321781 None:intergenic 60.0%
CTCCTATCCTCCGCCATCAC+CGG - chr3_3:81321909-81321928 Msa0477150:intron 60.0%
GGCGACGGCAGTGTTTCCAA+TGG - chr3_3:81321930-81321949 Msa0477150:intron 60.0%
GGTTTACGGCTGGAGACAGC+AGG + chr3_3:81321984-81322003 None:intergenic 60.0%
GCCGGTGATATCGCGAGCAA+AGG + chr3_3:81322042-81322061 None:intergenic 60.0%
ATTGGAGACACTGCCGTCGC+CGG + chr3_3:81322060-81322079 None:intergenic 60.0%
ACGGCAGTGTCTCCAATGGC+AGG - chr3_3:81322063-81322082 Msa0477150:intron 60.0%
TTTACCACGGGAGACAGCGG+GGG + chr3_3:81322123-81322142 None:intergenic 60.0%
GTTTACCACGGGAGACAGCG+GGG + chr3_3:81322124-81322143 None:intergenic 60.0%
! GGTGTAATGGCCGGTGATGG+GGG + chr3_3:81322180-81322199 None:intergenic 60.0%
CGGTGTAATGGCCGGTGATG+GGG + chr3_3:81322181-81322200 None:intergenic 60.0%
CCGGTGTAATGGCCGGTGAT+GGG + chr3_3:81322182-81322201 None:intergenic 60.0%
CCCATCACCGGCCATTACAC+CGG - chr3_3:81322179-81322198 Msa0477150:intron 60.0%
!! CACTGGCTTCGCCGGTGTAA+TGG + chr3_3:81322193-81322212 None:intergenic 60.0%
GAAGGGGTGAGGAGTGGAGA+TGG + chr3_3:81322236-81322255 None:intergenic 60.0%
CACGGGAGATAGAAGGGGTG+AGG + chr3_3:81322247-81322266 None:intergenic 60.0%
CTCACCCCTTCTATCTCCCG+TGG - chr3_3:81322245-81322264 Msa0477150:CDS 60.0%
! GCTTCTATCGCCGGTGATGG+CGG + chr3_3:81322309-81322328 None:intergenic 60.0%
AGCGTTTCCAGCGGCAGGAT+CGG - chr3_3:81322326-81322345 Msa0477150:CDS 60.0%
ACCAGAGACAGCAGGGGTGA+GGG + chr3_3:81322363-81322382 None:intergenic 60.0%
AGGTTCAGGGAGTGGGAGCA+TGG - chr3_3:81323133-81323152 Msa0477150:CDS 60.0%
GGAAGCGAGCGTGGCCTTTA+CGG + chr3_3:81321671-81321690 None:intergenic 60.0%
CTGAGTAGAGGTGGAGGGAG+TGG + chr3_3:81321739-81321758 None:intergenic 60.0%
GGTGGCTGAGTAGAGGTGGA+GGG + chr3_3:81321744-81321763 None:intergenic 60.0%
AGGTGGCTGAGTAGAGGTGG+AGG + chr3_3:81321745-81321764 None:intergenic 60.0%
TGGAGGTGGCTGAGTAGAGG+TGG + chr3_3:81321748-81321767 None:intergenic 60.0%
TGGTGGAGGTGGCTGAGTAG+AGG + chr3_3:81321751-81321770 None:intergenic 60.0%
!! TGAAGTGGTGGTGGTGGAGG+TGG + chr3_3:81321762-81321781 None:intergenic 60.0%
CTCCTATCCTCCGCCATCAC+CGG - chr3_3:81321909-81321928 Msa0477150:intron 60.0%
GGCGACGGCAGTGTTTCCAA+TGG - chr3_3:81321930-81321949 Msa0477150:intron 60.0%
GGTTTACGGCTGGAGACAGC+AGG + chr3_3:81321984-81322003 None:intergenic 60.0%
GCCGGTGATATCGCGAGCAA+AGG + chr3_3:81322042-81322061 None:intergenic 60.0%
ATTGGAGACACTGCCGTCGC+CGG + chr3_3:81322060-81322079 None:intergenic 60.0%
ACGGCAGTGTCTCCAATGGC+AGG - chr3_3:81322063-81322082 Msa0477150:intron 60.0%
TTTACCACGGGAGACAGCGG+GGG + chr3_3:81322123-81322142 None:intergenic 60.0%
GTTTACCACGGGAGACAGCG+GGG + chr3_3:81322124-81322143 None:intergenic 60.0%
! GGTGTAATGGCCGGTGATGG+GGG + chr3_3:81322180-81322199 None:intergenic 60.0%
CGGTGTAATGGCCGGTGATG+GGG + chr3_3:81322181-81322200 None:intergenic 60.0%
CCGGTGTAATGGCCGGTGAT+GGG + chr3_3:81322182-81322201 None:intergenic 60.0%
CCCATCACCGGCCATTACAC+CGG - chr3_3:81322179-81322198 Msa0477150:intron 60.0%
!! CACTGGCTTCGCCGGTGTAA+TGG + chr3_3:81322193-81322212 None:intergenic 60.0%
GAAGGGGTGAGGAGTGGAGA+TGG + chr3_3:81322236-81322255 None:intergenic 60.0%
CACGGGAGATAGAAGGGGTG+AGG + chr3_3:81322247-81322266 None:intergenic 60.0%
CTCACCCCTTCTATCTCCCG+TGG - chr3_3:81322245-81322264 Msa0477150:CDS 60.0%
! GCTTCTATCGCCGGTGATGG+CGG + chr3_3:81322309-81322328 None:intergenic 60.0%
AGCGTTTCCAGCGGCAGGAT+CGG - chr3_3:81322326-81322345 Msa0477150:CDS 60.0%
ACCAGAGACAGCAGGGGTGA+GGG + chr3_3:81322363-81322382 None:intergenic 60.0%
AGGTTCAGGGAGTGGGAGCA+TGG - chr3_3:81323133-81323152 Msa0477150:CDS 60.0%
AGCGAGCGTGGCCTTTACGG+TGG + chr3_3:81321668-81321687 None:intergenic 65.0%
AACACTGCCGTCGCCGGTGA+TGG + chr3_3:81321925-81321944 None:intergenic 65.0%
GCTCGCGATATCACCGGCGA+CGG - chr3_3:81322044-81322063 Msa0477150:intron 65.0%
GGCGACGGCAGTGTCTCCAA+TGG - chr3_3:81322059-81322078 Msa0477150:intron 65.0%
!! GTAATGGCCGGTGATGGGGG+AGG + chr3_3:81322177-81322196 None:intergenic 65.0%
GCCGGTGTAATGGCCGGTGA+TGG + chr3_3:81322183-81322202 None:intergenic 65.0%
GGCTTCGCCGGTGTAATGGC+CGG + chr3_3:81322189-81322208 None:intergenic 65.0%
!! TCTATCGCCGGTGATGGCGG+AGG + chr3_3:81322306-81322325 None:intergenic 65.0%
AGATGGACCGATCCTGCCGC+TGG + chr3_3:81322336-81322355 None:intergenic 65.0%
ACCCTCACCCCTGCTGTCTC+TGG - chr3_3:81322359-81322378 Msa0477150:CDS 65.0%
CACCAGAGACAGCAGGGGTG+AGG + chr3_3:81322364-81322383 None:intergenic 65.0%
CTCACCCCTGCTGTCTCTGG+TGG - chr3_3:81322362-81322381 Msa0477150:CDS 65.0%
AGCGAGCGTGGCCTTTACGG+TGG + chr3_3:81321668-81321687 None:intergenic 65.0%
AACACTGCCGTCGCCGGTGA+TGG + chr3_3:81321925-81321944 None:intergenic 65.0%
GCTCGCGATATCACCGGCGA+CGG - chr3_3:81322044-81322063 Msa0477150:intron 65.0%
GGCGACGGCAGTGTCTCCAA+TGG - chr3_3:81322059-81322078 Msa0477150:intron 65.0%
!! GTAATGGCCGGTGATGGGGG+AGG + chr3_3:81322177-81322196 None:intergenic 65.0%
GCCGGTGTAATGGCCGGTGA+TGG + chr3_3:81322183-81322202 None:intergenic 65.0%
GGCTTCGCCGGTGTAATGGC+CGG + chr3_3:81322189-81322208 None:intergenic 65.0%
!! TCTATCGCCGGTGATGGCGG+AGG + chr3_3:81322306-81322325 None:intergenic 65.0%
AGATGGACCGATCCTGCCGC+TGG + chr3_3:81322336-81322355 None:intergenic 65.0%
ACCCTCACCCCTGCTGTCTC+TGG - chr3_3:81322359-81322378 Msa0477150:CDS 65.0%
CACCAGAGACAGCAGGGGTG+AGG + chr3_3:81322364-81322383 None:intergenic 65.0%
CTCACCCCTGCTGTCTCTGG+TGG - chr3_3:81322362-81322381 Msa0477150:CDS 65.0%
GATTGCGGCGGAAGCGAGCG+TGG + chr3_3:81321680-81321699 None:intergenic 70.0%
!! CGCCGGTGATGGCGGAGGAT+AGG + chr3_3:81321914-81321933 None:intergenic 70.0%
TCCTCCGCCATCACCGGCGA+CGG - chr3_3:81321915-81321934 Msa0477150:intron 70.0%
! ACTGCCGTCGCCGGTGATGG+CGG + chr3_3:81321922-81321941 None:intergenic 70.0%
GCGGGGGTGGGGATGGTAGA+TGG + chr3_3:81322107-81322126 None:intergenic 70.0%
GATTGCGGCGGAAGCGAGCG+TGG + chr3_3:81321680-81321699 None:intergenic 70.0%
!! CGCCGGTGATGGCGGAGGAT+AGG + chr3_3:81321914-81321933 None:intergenic 70.0%
TCCTCCGCCATCACCGGCGA+CGG - chr3_3:81321915-81321934 Msa0477150:intron 70.0%
! ACTGCCGTCGCCGGTGATGG+CGG + chr3_3:81321922-81321941 None:intergenic 70.0%
GCGGGGGTGGGGATGGTAGA+TGG + chr3_3:81322107-81322126 None:intergenic 70.0%
GGAGACAGCGGGGGTGGGGA+TGG + chr3_3:81322114-81322133 None:intergenic 75.0%
CACGGGAGACAGCGGGGGTG+GGG + chr3_3:81322118-81322137 None:intergenic 75.0%
CCACGGGAGACAGCGGGGGT+GGG + chr3_3:81322119-81322138 None:intergenic 75.0%
ACCACGGGAGACAGCGGGGG+TGG + chr3_3:81322120-81322139 None:intergenic 75.0%
GGAGACAGCGGGGGTGGGGA+TGG + chr3_3:81322114-81322133 None:intergenic 75.0%
CACGGGAGACAGCGGGGGTG+GGG + chr3_3:81322118-81322137 None:intergenic 75.0%
CCACGGGAGACAGCGGGGGT+GGG + chr3_3:81322119-81322138 None:intergenic 75.0%
ACCACGGGAGACAGCGGGGG+TGG + chr3_3:81322120-81322139 None:intergenic 75.0%
!!! GCCGTCGCCGGTGATGGCGG+AGG + chr3_3:81321919-81321938 None:intergenic 80.0%
! CCCACCCCCGCTGTCTCCCG+TGG - chr3_3:81322116-81322135 Msa0477150:intron 80.0%
!!! GCCGTCGCCGGTGATGGCGG+AGG + chr3_3:81321919-81321938 None:intergenic 80.0%
! CCCACCCCCGCTGTCTCCCG+TGG - chr3_3:81322116-81322135 Msa0477150:intron 80.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 81321477 81323193 81321477 ID=Msa0477150;Name=Msa0477150
chr3_3 mRNA 81321477 81323193 81321477 ID=Msa0477150-mRNA-1;Parent=Msa0477150;Name=Msa0477150-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|3|0|452
chr3_3 exon 81322181 81323193 81322181 ID=Msa0477150-mRNA-1:exon:22409;Parent=Msa0477150-mRNA-1
chr3_3 exon 81321795 81321920 81321795 ID=Msa0477150-mRNA-1:exon:22408;Parent=Msa0477150-mRNA-1
chr3_3 exon 81321477 81321696 81321477 ID=Msa0477150-mRNA-1:exon:22407;Parent=Msa0477150-mRNA-1
chr3_3 CDS 81322181 81323193 81322181 ID=Msa0477150-mRNA-1:cds;Parent=Msa0477150-mRNA-1
chr3_3 CDS 81321795 81321920 81321795 ID=Msa0477150-mRNA-1:cds;Parent=Msa0477150-mRNA-1
chr3_3 CDS 81321477 81321696 81321477 ID=Msa0477150-mRNA-1:cds;Parent=Msa0477150-mRNA-1
Gene Sequence

>Msa0477150

ATGACTTTGAGATTGATGGATTTTCCAAACATGGATGAGGAAAAAGAAAAGGCAATATTAGAAACTGCCACACAAGGCTTAAACTCACTTGCCAACTTCGCTAATAATGTCTCTCCCCAACCCTCTCTTCAAAACACTGAACTTACCAACATCACTGTTTCAGACCTCAAGAAACTATCCAACTTACTCCACCGTAAAGGCCACGCTCGCTTCCGCCGCAATCCAAATGCAACCCCTGATCAACCGCTGCCACAAACTTCCACTCCCTCCACCTCTACTCAGCCACCTCCACCACCACCACTTCAAATTCAAATTCCTCCTAAGAGCCATAACCAACCTTTAACTCTCGATTTTACTAAACCTTACACCTTTAAATCTAACCCTAAATCCTTAGATCTAGAAATCCCCAAGGAAACATTTAGTTTTCCATCACTCCTATCCTCCGCCATCACCGGCGACGGCAGTGTTTCCAATGGCAGACTTGGTCCATCTCAAATTCTCACCCCTGCTGTCTCCAGCCGTAAACCACCTCTTTCACCTAACTCATCATTCATGTCATCTGCCTTTGCTCGCGATATCACCGGCGACGGCAGTGTCTCCAATGGCAGGCTAGGTCCATGTCCAATGCCATCTACCATCCCCACCCCCGCTGTCTCCCGTGGTAAACAGCCTCTTTCTTCTATCTCACCATTCATGTCCTCCCCCATCACCGGCCATTACACCGGCGAAGCCAGTGTTTCCAATGGCAGACTAGGACCATCTCCACTCCTCACCCCTTCTATCTCCCGTGGTAAACAGCCTCTTACATCTTACTCATCTTTCATGTCCTCCGCCATCACCGGCGATAGAAGCGTTTCCAGCGGCAGGATCGGTCCATCTTATACCCTCACCCCTGCTGTCTCTGGTGGTAAACCGCCTCTTTCATCGCCGTCATTGAAGAAAAGCTGTCACAATCACTCCGGCGATGTCTCTGGGAAAACCTCCGCATCTAAGAAATGCCACTGCCAGAAAAGGAAAAATCGGAACAGGAGACAAGTGAGAGTCCCGTGCATAAGTTCAAGGATTGCTGATATACCAGCAGATGAGTATTCATGGAGGAAGTATGGTTCCAAACCGATTAAGGGAACACCACATCCAAGGGGTTATTATAGGTGCACTATGTCTAAAAATTGTCCAGCTAGGAAAAGGGTGGAGAAGGCGAAAGATGATCCAAATATACTAGTTGTAACGTATGAGTTTGAGCATCGTCACCACCAGCTTCATAATCAAGCCCCAATGCAAGAGAATAATTCTGGTTCAGGTTCAGGGAGTGGGAGCATGGATTTGGGGGTGTTTGAGCTAACCTTAGGAGGGAATTAG
Protein sequence

>Msa0477150

MTLRLMDFPNMDEEKEKAILETATQGLNSLANFANNVSPQPSLQNTELTNITVSDLKKLSNLLHRKGHARFRRNPNATPDQPLPQTSTPSTSTQPPPPPPLQIQIPPKSHNQPLTLDFTKPYTFKSNPKSLDLEIPKETFSFPSLLSSAITGDGSVSNGRLGPSQILTPAVSSRKPPLSPNSSFMSSAFARDITGDGSVSNGRLGPCPMPSTIPTPAVSRGKQPLSSISPFMSSPITGHYTGEASVSNGRLGPSPLLTPSISRGKQPLTSYSSFMSSAITGDRSVSSGRIGPSYTLTPAVSGGKPPLSSPSLKKSCHNHSGDVSGKTSASKKCHCQKRKNRNRRQVRVPCISSRIADIPADEYSWRKYGSKPIKGTPHPRGYYRCTMSKNCPARKRVEKAKDDPNILVVTYEFEHRHHQLHNQAPMQENNSGSGSGSGSMDLGVFELTLGGN*