AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0477450

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0477450 MtrunA17_Chr3g0139371 89.655 435 12 2 1 435 1 402 0.0 781
Msa0477450 MtrunA17_Chr4g0058241 56.236 441 140 8 10 431 17 423 1.05e-164 470
Msa0477450 MtrunA17_Chr3g0116701 55.856 444 144 9 4 431 12 419 5.79e-162 463
Msa0477450 MtrunA17_Chr3g0123491 55.629 453 142 7 2 431 4 420 6.35e-162 463
Msa0477450 MtrunA17_Chr8g0369241 31.768 362 180 10 107 430 148 480 2.54e-43 162
Msa0477450 MtrunA17_Chr6g0480541 32.641 337 192 8 101 434 899 1203 1.93e-40 154
Msa0477450 MtrunA17_Chr5g0407121 30.570 386 189 11 107 431 47 414 3.46e-40 149
Msa0477450 MtrunA17_Chr1g0210061 29.716 387 208 10 56 431 592 925 6.18e-39 149
Msa0477450 MtrunA17_Chr5g0437131 30.267 337 192 6 98 429 405 703 1.42e-38 148
Msa0477450 MtrunA17_Chr8g0370321 29.319 382 195 11 107 431 47 410 8.07e-38 142
Msa0477450 MtrunA17_Chr4g0027671 31.609 174 92 3 271 431 319 478 4.13e-22 99.0
Msa0477450 MtrunA17_Chr4g0027671 33.974 156 88 4 93 242 34 180 1.22e-20 94.4
Msa0477450 MtrunA17_Chr4g0051261 27.492 331 180 10 107 432 13 288 4.30e-22 95.9
Msa0477450 MtrunA17_Chr1g0179611 36.364 143 76 4 107 243 53 186 4.41e-22 98.6
Msa0477450 MtrunA17_Chr1g0179611 32.759 174 90 3 271 431 319 478 1.08e-19 91.7
Msa0477450 MtrunA17_Chr2g0320631 34.615 156 87 4 93 242 35 181 1.77e-21 97.1
Msa0477450 MtrunA17_Chr2g0320631 32.759 174 90 4 271 431 318 477 7.58e-21 95.1
Msa0477450 MtrunA17_Chr8g0339221 27.941 340 170 14 107 435 13 288 7.73e-21 94.4
Msa0477450 MtrunA17_Chr6g0480481 31.140 228 93 6 101 326 35 200 7.79e-21 90.5
Msa0477450 MtrunA17_Chr4g0057791 28.107 338 179 11 107 432 227 512 2.88e-20 93.2
Msa0477450 MtrunA17_Chr3g0141871 25.749 334 184 10 107 431 41 319 5.15e-19 88.2
Msa0477450 MtrunA17_Chr2g0293491 27.027 333 179 12 107 432 13 288 7.20e-19 86.7
Msa0477450 MtrunA17_Chr4g0038501 30.804 224 110 6 107 323 29 214 7.20e-19 89.7
Msa0477450 MtrunA17_Chr4g0002001 27.874 348 171 12 107 431 13 303 1.96e-18 85.5
Msa0477450 MtrunA17_Chr8g0369451 27.545 334 172 13 107 432 13 284 2.11e-18 87.0
Msa0477450 MtrunA17_Chr6g0478601 31.801 261 141 11 107 349 120 361 4.05e-18 86.7
Msa0477450 MtrunA17_Chr5g0397261 25.982 331 186 11 107 431 50 327 4.12e-18 85.5
Msa0477450 MtrunA17_Chr4g0038091 30.357 224 111 6 107 323 29 214 4.75e-18 87.0
Msa0477450 MtrunA17_Chr4g0065851 27.219 338 178 14 107 431 34 316 5.92e-18 86.3
Msa0477450 MtrunA17_Chr1g0187371 26.409 337 181 13 107 431 27 308 9.94e-18 83.6
Msa0477450 MtrunA17_Chr8g0348481 26.126 333 183 11 107 431 46 323 1.79e-17 83.6
Msa0477450 MtrunA17_Chr3g0130781 24.719 356 187 14 107 433 27 330 3.67e-17 83.6
Msa0477450 MtrunA17_Chr4g0030231 27.341 267 134 9 170 431 115 326 6.65e-17 82.0
Msa0477450 MtrunA17_Chr2g0284091 26.126 333 185 10 105 431 47 324 1.03e-16 81.6
Msa0477450 MtrunA17_Chr4g0030151 25.225 333 186 12 107 431 48 325 2.69e-16 80.1
Msa0477450 MtrunA17_Chr2g0287271 27.139 339 179 14 107 432 34 317 2.75e-16 81.3
Msa0477450 MtrunA17_Chr2g0277011 24.490 343 191 12 98 431 91 374 3.13e-16 80.5
Msa0477450 MtrunA17_Chr4g0018201 32.751 229 130 9 107 324 768 983 3.24e-16 81.3
Msa0477450 MtrunA17_Chr5g0428981 32.314 229 131 9 107 324 772 987 4.59e-16 80.9
Msa0477450 MtrunA17_Chr4g0045841 23.810 336 186 12 107 431 64 340 5.93e-16 79.3
Msa0477450 MtrunA17_Chr8g0350311 25.369 339 180 15 105 431 146 423 6.91e-16 79.7
Msa0477450 MtrunA17_Chr8g0358921 25.740 338 180 12 107 431 56 335 7.85e-16 78.6
Msa0477450 MtrunA17_Chr1g0205931 26.515 264 145 9 107 356 64 292 9.51e-16 79.7
Msa0477450 MtrunA17_Chr1g0170551 27.046 281 142 11 107 371 16 249 1.02e-15 80.1
Msa0477450 MtrunA17_Chr8g0392811 25.595 336 186 11 107 431 126 408 1.69e-15 78.6
Msa0477450 MtrunA17_Chr7g0248461 25.526 333 185 12 107 431 47 324 2.30e-15 77.4
Msa0477450 MtrunA17_Chr6g0483151 24.412 340 180 12 107 434 23 297 2.38e-15 77.4
Msa0477450 MtrunA17_Chr2g0320011 24.551 334 189 11 105 431 95 372 3.52e-15 77.0
Msa0477450 MtrunA17_Chr8g0378831 24.779 339 181 10 107 431 41 319 7.16e-15 75.9
Msa0477450 MtrunA17_Chr8g0359091 28.319 339 175 14 107 432 35 318 8.48e-15 76.6
Msa0477450 MtrunA17_Chr3g0096631 28.800 250 132 9 107 345 34 248 1.22e-14 76.3
Msa0477450 MtrunA17_Chr5g0443351 25.595 336 186 11 107 431 31 313 1.23e-14 75.9
Msa0477450 MtrunA17_Chr8g0377071 26.727 333 188 10 107 432 394 677 1.91e-14 75.5
Msa0477450 MtrunA17_Chr3g0122781 26.667 345 188 12 107 432 425 723 3.06e-14 75.1
Msa0477450 MtrunA17_Chr3g0102571 25.000 260 147 7 173 431 154 366 4.63e-14 73.6
Msa0477450 MtrunA17_Chr7g0272841 25.758 264 147 8 107 356 77 305 5.50e-14 73.9
Msa0477450 MtrunA17_Chr3g0099951 23.653 334 186 11 107 431 23 296 6.83e-14 73.2
Msa0477450 MtrunA17_Chr7g0246591 23.615 343 198 11 98 431 138 425 1.18e-13 72.8
Msa0477450 MtrunA17_Chr6g0482681 25.000 336 188 12 107 431 98 380 1.62e-13 72.4
Msa0477450 MtrunA17_Chr3g0093391 24.638 345 186 12 107 431 32 322 1.88e-13 72.0
Msa0477450 MtrunA17_Chr3g0093571 24.709 344 187 11 107 431 34 324 1.93e-13 72.0
Msa0477450 MtrunA17_Chr7g0245031 27.876 226 122 7 107 328 157 345 2.68e-13 71.6
Msa0477450 MtrunA17_Chr2g0314321 26.331 357 176 13 107 432 34 334 3.46e-13 71.6
Msa0477450 MtrunA17_Chr1g0190131 26.061 330 154 10 107 430 18 263 6.65e-13 68.9
Msa0477450 MtrunA17_Chr8g0345801 26.471 238 126 7 107 335 24 221 1.01e-12 68.2
Msa0477450 MtrunA17_Chr1g0167351 25.498 251 147 6 107 332 119 354 1.39e-12 69.3
Msa0477450 MtrunA17_Chr4g0059751 27.626 257 128 11 107 346 98 313 3.07e-12 68.2
Msa0477450 MtrunA17_Chr1g0167311 25.896 251 146 7 107 332 124 359 3.33e-12 68.2
Msa0477450 MtrunA17_Chr1g0201571 26.829 287 148 13 75 345 104 344 4.17e-12 68.2
Msa0477450 MtrunA17_Chr4g0030241 30.612 147 73 5 220 361 15 137 6.77e-12 63.9
Msa0477450 MtrunA17_Chr1g0176421 25.449 334 160 13 107 433 170 421 7.13e-12 67.4
Msa0477450 MtrunA17_Chr7g0258051 24.806 258 148 8 98 348 18 236 9.56e-12 67.0
Msa0477450 MtrunA17_Chr1g0203881 25.846 325 160 10 107 428 50 296 9.84e-12 66.6
Msa0477450 MtrunA17_Chr2g0286421 25.872 344 168 12 107 431 111 386 1.13e-11 66.6
Msa0477450 MtrunA17_Chr3g0131861 25.581 344 169 11 107 431 106 381 1.20e-11 66.6
Msa0477450 MtrunA17_Chr4g0061141 24.348 345 174 12 107 432 114 390 1.49e-11 66.6
Msa0477450 MtrunA17_Chr6g0453711 24.702 336 182 13 107 431 119 394 5.93e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0477450 AT4G32660.1 65.888 428 106 4 6 432 9 397 0.0 566
Msa0477450 AT4G32660.3 65.888 428 106 4 6 432 1 389 0.0 565
Msa0477450 AT4G32660.2 66.321 386 90 4 6 390 9 355 1.63e-179 505
Msa0477450 AT3G53570.1 58.520 446 128 8 9 431 32 443 2.43e-174 496
Msa0477450 AT3G53570.4 58.520 446 128 8 9 431 32 443 2.43e-174 496
Msa0477450 AT3G53570.2 58.520 446 128 8 9 431 32 443 2.43e-174 496
Msa0477450 AT3G53570.3 58.520 446 128 8 9 431 18 429 5.67e-174 495
Msa0477450 AT3G53570.5 58.520 446 128 8 9 431 18 429 5.67e-174 495
Msa0477450 AT4G24740.1 53.691 447 142 8 10 431 17 423 8.92e-160 457
Msa0477450 AT4G24740.7 58.312 391 126 6 43 431 30 385 1.10e-159 456
Msa0477450 AT4G32660.4 73.129 294 69 2 140 432 1 285 4.78e-157 445
Msa0477450 AT4G24740.6 63.720 328 105 5 107 431 4 320 1.97e-149 427
Msa0477450 AT4G24740.9 63.720 328 105 5 107 431 4 320 1.97e-149 427
Msa0477450 AT4G24740.2 63.720 328 105 5 107 431 4 320 1.97e-149 427
Msa0477450 AT4G24740.3 54.201 369 106 6 10 354 17 346 2.07e-132 385
Msa0477450 AT4G24740.5 67.600 250 69 3 107 354 4 243 1.96e-121 353
Msa0477450 AT4G24740.4 52.047 342 100 7 6 323 14 315 1.38e-111 331
Msa0477450 AT4G24740.10 64.623 212 70 4 223 431 8 217 3.51e-92 278
Msa0477450 AT4G24740.8 64.623 212 70 4 223 431 8 217 3.51e-92 278
Msa0477450 AT5G35980.2 31.129 363 181 11 107 430 131 463 9.55e-42 158
Msa0477450 AT5G35980.3 31.129 363 181 11 107 430 96 428 2.53e-41 157
Msa0477450 AT5G35980.1 31.129 363 181 11 107 430 131 463 2.87e-41 157
Msa0477450 AT3G53640.1 30.102 392 201 11 56 431 305 639 3.90e-40 152
Msa0477450 AT1G73460.2 31.445 353 206 9 86 434 843 1163 5.53e-39 150
Msa0477450 AT1G73460.1 31.445 353 206 9 86 434 843 1163 5.53e-39 150
Msa0477450 AT1G73450.1 31.445 353 206 9 86 434 826 1146 6.27e-39 150
Msa0477450 AT1G13350.3 30.179 391 200 12 56 430 497 830 6.76e-39 150
Msa0477450 AT3G25840.2 29.847 392 201 11 56 431 337 670 7.41e-39 149
Msa0477450 AT1G13350.2 30.102 392 201 12 56 431 451 785 8.12e-39 149
Msa0477450 AT1G13350.1 30.102 392 201 12 56 431 424 758 1.02e-38 149
Msa0477450 AT3G17750.1 31.953 338 195 8 98 434 829 1132 5.09e-38 147
Msa0477450 AT3G25840.1 29.847 392 201 11 56 431 599 932 8.64e-38 147
Msa0477450 AT4G35500.1 28.535 396 194 12 107 435 47 420 2.67e-37 141
Msa0477450 AT2G40120.1 30.861 337 190 8 98 429 263 561 4.76e-37 142
Msa0477450 AT4G35500.2 25.743 404 196 13 107 435 47 421 1.28e-27 114
Msa0477450 AT3G44850.1 38.462 143 73 4 107 243 54 187 7.69e-23 101
Msa0477450 AT3G44850.1 34.483 174 87 5 271 431 322 481 9.68e-22 98.2
Msa0477450 AT3G53030.1 36.364 143 76 4 107 243 51 184 1.17e-21 97.8
Msa0477450 AT3G53030.1 33.143 175 90 3 271 432 307 467 3.03e-20 93.6
Msa0477450 AT2G38620.2 28.406 345 173 15 107 431 13 303 2.46e-21 94.4
Msa0477450 AT5G22840.1 36.364 143 76 4 107 243 54 187 1.68e-20 94.4
Msa0477450 AT5G22840.1 33.908 174 88 5 271 431 311 470 3.45e-20 93.6
Msa0477450 AT1G76540.1 25.220 341 180 13 107 431 23 304 1.17e-19 89.7
Msa0477450 AT3G13530.1 30.804 224 110 6 107 323 29 214 1.21e-19 92.4
Msa0477450 AT3G54180.1 27.697 343 176 13 107 431 13 301 2.64e-19 88.6
Msa0477450 AT3G48750.1 24.848 330 190 9 107 432 13 288 4.80e-19 87.4
Msa0477450 AT4G19110.2 27.300 337 169 13 107 432 13 284 6.44e-19 89.4
Msa0477450 AT4G19110.1 27.300 337 169 13 107 432 13 284 7.77e-19 89.0
Msa0477450 AT3G17850.1 31.950 241 137 8 107 336 891 1115 9.06e-19 89.7
Msa0477450 AT3G07980.1 31.250 224 109 7 107 323 29 214 1.10e-18 89.7
Msa0477450 AT3G07980.2 31.250 224 109 7 107 323 29 214 1.11e-18 89.7
Msa0477450 AT2G17530.1 31.461 178 95 4 271 435 256 419 1.12e-18 88.2
Msa0477450 AT2G17530.1 34.965 143 78 4 107 243 47 180 1.24e-16 82.0
Msa0477450 AT2G17530.3 31.461 178 95 4 271 435 256 419 1.12e-18 88.2
Msa0477450 AT2G17530.3 34.965 143 78 4 107 243 47 180 1.24e-16 82.0
Msa0477450 AT4G13020.7 25.672 335 183 10 107 435 13 287 2.91e-18 86.3
Msa0477450 AT4G13020.1 25.672 335 183 10 107 435 13 287 3.48e-18 86.7
Msa0477450 AT4G13020.6 25.672 335 183 10 107 435 13 287 3.50e-18 86.3
Msa0477450 AT4G13020.4 25.672 335 183 10 107 435 13 287 3.84e-18 86.3
Msa0477450 AT2G38620.4 30.579 242 111 9 194 431 53 241 3.86e-18 84.0
Msa0477450 AT4G13020.2 25.672 335 183 10 107 435 21 295 4.69e-18 86.3
Msa0477450 AT4G13020.3 25.672 335 183 10 107 435 21 295 4.71e-18 86.3
Msa0477450 AT4G11330.1 26.205 332 184 13 107 431 52 329 5.73e-18 85.5
Msa0477450 AT1G01560.2 26.471 340 173 13 107 431 49 326 8.60e-18 85.1
Msa0477450 AT1G20930.1 25.948 343 175 12 107 431 25 306 1.05e-17 84.0
Msa0477450 AT1G10210.2 25.526 333 186 12 107 431 41 319 1.84e-17 84.0
Msa0477450 AT1G10210.3 25.526 333 186 12 107 431 41 319 1.84e-17 84.0
Msa0477450 AT1G10210.1 25.526 333 186 12 107 431 41 319 1.84e-17 84.0
Msa0477450 AT5G63370.2 25.595 336 191 10 107 431 172 459 1.92e-17 84.7
Msa0477450 AT5G63370.3 25.595 336 191 10 107 431 172 459 1.92e-17 84.7
Msa0477450 AT1G59580.2 26.205 332 185 11 107 431 41 319 2.26e-17 84.0
Msa0477450 AT1G59580.1 26.205 332 185 11 107 431 41 319 2.26e-17 84.0
Msa0477450 AT4G01370.1 26.126 333 183 12 107 431 52 329 2.46e-17 83.6
Msa0477450 AT4G13020.8 25.959 339 186 11 107 435 13 296 2.68e-17 83.6
Msa0477450 AT4G13020.5 25.959 339 186 11 107 435 13 296 3.01e-17 84.0
Msa0477450 AT5G63370.7 25.893 336 190 11 107 431 306 593 3.02e-17 84.7
Msa0477450 AT5G63370.8 25.893 336 190 11 107 431 306 593 3.02e-17 84.7
Msa0477450 AT5G63370.4 25.893 336 190 11 107 431 306 593 3.02e-17 84.7
Msa0477450 AT5G63370.6 25.893 336 190 11 107 431 306 593 3.02e-17 84.7
Msa0477450 AT5G63370.1 25.893 336 190 11 107 431 306 593 3.02e-17 84.7
Msa0477450 AT2G17530.2 34.965 143 78 4 107 243 47 180 3.94e-17 82.8
Msa0477450 AT2G17530.2 41.667 84 43 1 271 348 256 339 3.26e-13 71.2
Msa0477450 AT5G45430.2 26.706 337 171 13 107 432 13 284 5.33e-17 83.6
Msa0477450 AT5G45430.1 26.706 337 171 13 107 432 13 284 5.56e-17 83.6
Msa0477450 AT1G57870.1 24.581 358 172 11 98 431 83 366 6.11e-17 82.8
Msa0477450 AT1G57870.4 24.581 358 172 11 98 431 83 366 6.11e-17 82.8
Msa0477450 AT1G57870.2 24.581 358 172 11 98 431 83 366 6.11e-17 82.8
Msa0477450 AT1G57870.3 25.656 343 187 12 98 431 83 366 6.32e-17 83.2
Msa0477450 AT5G19010.1 27.697 343 172 15 107 432 34 317 7.80e-16 80.1
Msa0477450 AT1G09840.3 24.302 358 173 11 98 431 84 367 7.96e-16 79.3
Msa0477450 AT1G09840.7 24.302 358 173 11 98 431 84 367 7.96e-16 79.3
Msa0477450 AT1G09840.10 24.302 358 173 11 98 431 84 367 7.96e-16 79.3
Msa0477450 AT1G09840.6 24.302 358 173 11 98 431 84 367 7.96e-16 79.3
Msa0477450 AT1G09840.4 24.302 358 173 11 98 431 84 367 7.96e-16 79.3
Msa0477450 AT1G09840.1 24.302 358 173 11 98 431 84 367 7.96e-16 79.3
Msa0477450 AT1G09840.9 24.302 358 173 11 98 431 84 367 7.96e-16 79.3
Msa0477450 AT1G09840.5 24.302 358 173 11 98 431 84 367 7.96e-16 79.3
Msa0477450 AT1G09840.8 24.302 358 173 11 98 431 84 367 7.96e-16 79.3
Msa0477450 AT1G09840.2 24.302 358 173 11 98 431 84 367 7.96e-16 79.3
Msa0477450 AT5G63610.1 29.832 238 116 9 212 433 133 335 1.26e-15 79.3
Msa0477450 AT3G14720.1 27.628 333 185 12 107 432 34 317 1.49e-15 79.3
Msa0477450 AT4G18710.1 25.075 335 186 11 105 431 47 324 3.09e-15 77.4
Msa0477450 AT1G67580.1 25.150 334 192 9 107 432 415 698 3.18e-15 78.6
Msa0477450 AT1G67580.2 25.150 334 192 9 107 432 415 698 3.18e-15 78.6
Msa0477450 AT1G01560.3 25.749 334 167 14 107 423 49 318 3.57e-15 77.0
Msa0477450 AT1G48490.4 28.788 264 156 8 107 356 838 1083 3.77e-15 78.6
Msa0477450 AT1G48490.3 28.788 264 156 8 107 356 837 1082 3.94e-15 78.6
Msa0477450 AT1G48490.2 28.788 264 156 8 107 356 837 1082 3.94e-15 78.6
Msa0477450 AT1G48490.1 28.788 264 156 8 107 356 837 1082 3.94e-15 78.6
Msa0477450 AT1G73670.1 26.149 348 184 12 99 431 92 381 4.77e-15 77.8
Msa0477450 AT3G14720.2 27.628 333 185 12 107 432 34 317 6.52e-15 76.6
Msa0477450 AT3G14720.3 27.628 333 185 12 107 432 34 317 6.52e-15 76.6
Msa0477450 AT3G45640.1 24.107 336 186 11 107 431 47 324 6.58e-15 76.3
Msa0477450 AT2G30980.1 24.279 416 235 16 26 431 11 356 6.91e-15 76.6
Msa0477450 AT4G36450.1 24.773 331 188 10 107 431 41 316 9.59e-15 75.9
Msa0477450 AT2G18170.1 24.699 332 190 10 107 431 41 319 9.62e-15 75.9
Msa0477450 AT4G19110.3 29.075 227 106 8 213 432 50 228 1.01e-14 75.9
Msa0477450 AT1G50240.3 26.429 280 145 11 107 371 15 248 1.29e-14 77.0
Msa0477450 AT1G50240.2 26.429 280 145 11 107 371 15 248 1.29e-14 77.0
Msa0477450 AT1G07880.2 24.625 333 188 11 107 431 42 319 1.55e-14 75.1
Msa0477450 AT2G43790.1 23.442 337 188 12 107 432 72 349 1.58e-14 75.5
Msa0477450 AT3G18040.5 27.899 276 153 9 107 371 27 267 2.74e-14 75.1
Msa0477450 AT3G18040.1 27.899 276 153 9 107 371 32 272 3.32e-14 75.1
Msa0477450 AT1G06390.2 24.478 335 188 12 105 431 77 354 4.24e-14 74.3
Msa0477450 AT1G06390.1 24.478 335 188 12 105 431 77 354 4.24e-14 74.3
Msa0477450 AT3G18040.4 27.899 276 153 9 107 371 141 381 4.36e-14 74.7
Msa0477450 AT2G42880.1 29.921 254 124 10 107 345 34 248 4.61e-14 74.7
Msa0477450 AT5G63370.5 27.888 251 132 10 107 345 306 519 4.93e-14 74.3
Msa0477450 AT5G63370.10 27.888 251 132 10 107 345 306 519 4.93e-14 74.3
Msa0477450 AT3G18040.3 27.899 276 153 9 107 371 141 381 6.09e-14 74.3
Msa0477450 AT1G73690.1 25.000 336 177 14 107 431 20 291 6.50e-14 73.6
Msa0477450 AT2G42880.2 29.921 254 124 10 107 345 34 248 6.56e-14 73.9
Msa0477450 AT1G09000.1 27.391 230 122 7 107 326 78 272 6.78e-14 74.3
Msa0477450 AT5G63370.9 26.800 250 136 8 107 345 172 385 8.18e-14 73.2
Msa0477450 AT1G09000.2 27.391 230 122 7 107 326 78 272 9.20e-14 73.9
Msa0477450 AT1G01560.4 28.226 248 127 10 107 343 49 256 1.17e-13 71.6
Msa0477450 AT1G01560.1 28.226 248 127 10 107 343 49 256 1.17e-13 71.6
Msa0477450 AT1G53510.1 25.519 337 187 11 107 432 34 317 2.32e-13 72.4
Msa0477450 AT3G08730.1 27.632 228 120 8 107 328 143 331 2.42e-13 72.0
Msa0477450 AT3G08730.2 27.632 228 120 8 107 328 143 331 2.42e-13 72.0
Msa0477450 AT1G18150.3 28.464 267 144 10 99 354 106 336 3.15e-13 72.0
Msa0477450 AT1G18150.2 28.464 267 144 10 99 354 106 336 3.15e-13 72.0
Msa0477450 AT1G18150.1 28.464 267 144 10 99 354 106 336 3.15e-13 72.0
Msa0477450 AT3G08720.1 27.876 226 122 7 107 328 149 337 3.40e-13 71.6
Msa0477450 AT3G08720.3 27.876 226 122 7 107 328 149 337 3.40e-13 71.6
Msa0477450 AT3G08720.4 27.876 226 122 7 107 328 149 337 3.40e-13 71.6
Msa0477450 AT3G08720.2 27.876 226 122 7 107 328 149 337 3.40e-13 71.6
Msa0477450 AT2G01450.3 25.220 341 198 12 99 432 18 308 3.46e-13 71.6
Msa0477450 AT2G01450.1 25.220 341 198 12 99 432 18 308 3.46e-13 71.6
Msa0477450 AT2G01450.2 25.220 341 198 12 99 432 18 308 3.46e-13 71.6
Msa0477450 AT2G01450.4 25.220 341 198 12 99 432 18 308 3.46e-13 71.6
Msa0477450 AT2G38620.3 28.295 258 132 12 107 344 13 237 6.37e-13 68.9
Msa0477450 AT2G38620.1 28.295 258 132 12 107 344 13 237 6.37e-13 68.9
Msa0477450 AT4G18710.2 24.803 254 149 8 105 351 41 259 6.38e-13 69.3
Msa0477450 AT1G54960.1 25.150 334 159 10 107 430 77 329 6.68e-13 71.2
Msa0477450 AT1G54960.2 25.150 334 159 10 107 430 77 329 6.68e-13 71.2
Msa0477450 AT3G04530.1 24.576 236 134 8 107 334 20 219 1.30e-12 68.6
Msa0477450 AT1G08650.1 24.085 328 170 8 107 432 24 274 1.32e-12 68.6
Msa0477450 AT1G08650.2 25.893 224 132 4 107 328 24 215 1.96e-12 67.8
Msa0477450 AT4G04700.1 25.877 228 131 6 107 328 37 232 2.43e-12 68.9
Msa0477450 AT1G09840.11 27.064 218 108 7 220 431 68 240 2.78e-12 67.8
Msa0477450 AT5G04510.2 24.783 230 141 8 105 329 51 253 8.06e-12 67.0
Msa0477450 AT5G04510.1 24.783 230 141 8 105 329 51 253 8.75e-12 67.4
Msa0477450 AT5G04510.3 24.348 230 142 8 105 329 51 253 1.29e-11 65.9
Msa0477450 AT3G18040.2 28.846 208 105 7 172 371 12 184 1.92e-11 65.9
Msa0477450 AT5G64960.1 25.648 347 180 13 107 431 35 325 3.69e-11 65.5
Msa0477450 AT4G10010.2 26.087 345 170 14 107 433 165 442 4.40e-11 65.5

Find 134 sgRNAs with CRISPR-Local

Find 330 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAGATACCATTTACATTAA+TGG 0.152187 3_3:+81634547 None:intergenic
GTGGATCTTGTTCGTGAATT+TGG 0.181033 3_3:-81632470 Msa0477450:CDS
AATTCAACCATTAATGTAAA+TGG 0.188155 3_3:-81634554 Msa0477450:exon
ACTCTATTGAACATAATTAT+TGG 0.190340 3_3:-81630057 Msa0477450:three_prime_UTR
GTTTCAGACTCATGAAAATT+TGG 0.209964 3_3:-81630856 Msa0477450:CDS
GCGATTAAGCTGATTGATTT+TGG 0.243544 3_3:-81632021 Msa0477450:CDS
ACCAACCACTGCCAAATTTC+TGG 0.248937 3_3:+81634359 None:intergenic
TGAATTTGGACGACAGCTTT+TGG 0.258689 3_3:-81632456 Msa0477450:CDS
AGATAAAATTCTCAGCAAAA+TGG 0.261730 3_3:-81633392 Msa0477450:intron
AGAATAAACCGTTGGGAGTT+AGG 0.277518 3_3:+81634686 None:intergenic
TGTCAGATGAAACACAATTT+AGG 0.278233 3_3:-81632062 Msa0477450:CDS
GGCAATGATGGAGAGAGTTT+TGG 0.280611 3_3:-81630826 Msa0477450:CDS
TCACGATCGTCGTCTCTTCT+TGG 0.281498 3_3:+81634303 None:intergenic
CTCCCTTGAAACAGCTCCTT+CGG 0.283662 3_3:+81630542 None:intergenic
AGGCACCTTCGGTCGAGTTT+TGG 0.286156 3_3:-81633280 Msa0477450:CDS
TCCTGAATTGGTTCGATTAC+CGG 0.290840 3_3:-81632996 Msa0477450:CDS
CTCTTGATCATCCCTTCTTT+AGG 0.304316 3_3:-81630270 Msa0477450:CDS
TCCGGTAATCGAACCAATTC+AGG 0.307110 3_3:+81632995 None:intergenic
TCATTAACTGATTTGTTGTA+TGG 0.314065 3_3:-81630337 Msa0477450:CDS
TTCAAATAACATAAGGCATT+TGG 0.316926 3_3:+81630231 None:intergenic
AGAGCCCCTGAGGTTATCTT+AGG 0.322517 3_3:-81631943 Msa0477450:intron
GCTTCAGGTCGGTGTGGATT+AGG 0.330715 3_3:+81632231 None:intergenic
TAACTCCCAACGGTTTATTC+TGG 0.343918 3_3:-81634684 Msa0477450:five_prime_UTR
GAAGAAGCTTGGTGATCTTA+AGG 0.349004 3_3:-81630505 Msa0477450:intron
CGCCGAGATTAAAGACATAA+TGG 0.351983 3_3:+81634277 None:intergenic
CTCTGGGAAGCAAGGCCTAC+TGG 0.365034 3_3:-81629911 Msa0477450:three_prime_UTR
TTATTGTAAATTGCAATATT+CGG 0.385008 3_3:+81634717 None:intergenic
GGGACCTCTACCAGAGCATA+TGG 0.387839 3_3:-81630805 Msa0477450:CDS
GTAAATGGTATCTAATTTCA+TGG 0.390979 3_3:-81634539 Msa0477450:exon
AATGCCTTATGTTATTTGAA+TGG 0.393858 3_3:-81630228 Msa0477450:three_prime_UTR
TTACAATGCATATGTGATTC+CGG 0.403247 3_3:+81632977 None:intergenic
TTACATACCTTTGGAATTGA+AGG 0.405726 3_3:+81634457 None:intergenic
GAATAAACCGTTGGGAGTTA+GGG 0.422514 3_3:+81634687 None:intergenic
TTTGGAGCACCTGGCAATGA+TGG 0.425144 3_3:-81630838 Msa0477450:CDS
TCCCTTGAAACAGCTCCTTC+GGG 0.428173 3_3:+81630543 None:intergenic
GCTAGTGCTGTAGGCACCTT+CGG 0.428753 3_3:-81633291 Msa0477450:CDS
CCAACCACTGCCAAATTTCT+GGG 0.430843 3_3:+81634360 None:intergenic
CACAATATCTCGCAGGGGTA+CGG 0.431103 3_3:-81630601 Msa0477450:intron
TGAACATAATTATTGGATAG+AGG 0.434262 3_3:-81630050 Msa0477450:three_prime_UTR
TTAAGTTGGAATCCTAAAGA+AGG 0.444665 3_3:+81630258 None:intergenic
GGAATCCCGTATCTTGTCTC+TGG 0.448674 3_3:-81634644 Msa0477450:five_prime_UTR
GGTATCTAATTTCATGGAAA+GGG 0.451585 3_3:-81634533 Msa0477450:CDS
GATAAAATTCTCAGCAAAAT+GGG 0.454575 3_3:-81633391 Msa0477450:intron
GGAAACGACCTCGTCTCGCT+TGG 0.458789 3_3:-81634501 Msa0477450:CDS
GAAACGACCTCGTCTCGCTT+GGG 0.459412 3_3:-81634500 Msa0477450:CDS
TATCAGGTCTTTGAGAAGCT+TGG 0.464813 3_3:-81632542 Msa0477450:intron
CTTGATCGCTACATAATCTC+TGG 0.464927 3_3:+81633239 None:intergenic
TCGTTACCTAAGATAACCTC+AGG 0.467009 3_3:+81631937 None:intergenic
GGTCATCTCCATGTGATTTG+TGG 0.473282 3_3:-81631008 Msa0477450:CDS
ACTGGGACATCAATATTTGA+AGG 0.489134 3_3:-81629893 Msa0477450:three_prime_UTR
GGCCCGAAGGAGCTGTTTCA+AGG 0.489761 3_3:-81630545 Msa0477450:CDS
TGTAAAGCTTCCTAGTTGTA+AGG 0.498491 3_3:-81632177 Msa0477450:intron
CGAACAAGATCCACAGGGAA+TGG 0.498629 3_3:+81632479 None:intergenic
GGCCATTATGTCTTTAATCT+CGG 0.499456 3_3:-81634279 Msa0477450:CDS
CAGAGATTATGTAGCGATCA+AGG 0.502779 3_3:-81633238 Msa0477450:CDS
TTTAGAAAATCAAATAAACT+TGG 0.502789 3_3:+81632518 None:intergenic
ACCTTTGGAATTGAAGGAGG+TGG 0.504072 3_3:+81634463 None:intergenic
GATCTTTGAACCATATGCTC+TGG 0.504088 3_3:+81630795 None:intergenic
AATAATTATGTTCAATAGAG+TGG 0.504744 3_3:+81630059 None:intergenic
TGGTATCTAATTTCATGGAA+AGG 0.505049 3_3:-81634534 Msa0477450:CDS
CCATGTGATTTGTGGAGTGT+TGG 0.505435 3_3:-81631000 Msa0477450:CDS
CAGCATGTTGCTAGTGCTGT+AGG 0.508712 3_3:-81633300 Msa0477450:CDS
ATAACCATTCAAATAACATA+AGG 0.509983 3_3:+81630224 None:intergenic
AAACTCTCTCCATCATTGCC+AGG 0.512831 3_3:+81630829 None:intergenic
TATCATTCAGAGGGCACTCT+GGG 0.514842 3_3:-81629927 Msa0477450:three_prime_UTR
CCCAGAAATTTGGCAGTGGT+TGG 0.517994 3_3:-81634360 Msa0477450:CDS
GGATTTATCATTTATTGCAG+TGG 0.518698 3_3:-81630170 Msa0477450:three_prime_UTR
CATTGCAATGCAAATACAGT+TGG 0.521160 3_3:+81630101 None:intergenic
CGATCGTCGTCTCTTCTTGG+AGG 0.522170 3_3:+81634306 None:intergenic
CTGGTTCTCCGTTCTTACAC+AGG 0.525514 3_3:-81634665 Msa0477450:five_prime_UTR
TCTGGGAAGCAAGGCCTACT+GGG 0.525947 3_3:-81629910 Msa0477450:three_prime_UTR
ATATCATTCAGAGGGCACTC+TGG 0.526011 3_3:-81629928 Msa0477450:three_prime_UTR
TCATGAAAATTTGGAGCACC+TGG 0.527435 3_3:-81630847 Msa0477450:CDS
AGAGGGCACTCTGGGAAGCA+AGG 0.530681 3_3:-81629919 Msa0477450:three_prime_UTR
GAACAAGATCCACAGGGAAT+GGG 0.532174 3_3:+81632480 None:intergenic
TAAGTTGGAATCCTAAAGAA+GGG 0.537826 3_3:+81630259 None:intergenic
TGGAATCTGTAGCATGTCTG+TGG 0.543898 3_3:-81632436 Msa0477450:CDS
AAAATGACATTCCAGGTCTA+GGG 0.544013 3_3:-81631032 Msa0477450:intron
AGAAGGGATGATCAAGAGCT+TGG 0.544574 3_3:+81630275 None:intergenic
TTGTAGAAACAATGGAGCTA+TGG 0.547337 3_3:+81631974 None:intergenic
TGTATTTGCATTGCAATGGA+TGG 0.547816 3_3:-81630096 Msa0477450:three_prime_UTR
GCTGTGTACAGATCCTGAAT+TGG 0.549041 3_3:-81633008 Msa0477450:CDS
AGCTTAATCGCACTAGACTT+AGG 0.556964 3_3:+81632033 None:intergenic
GTAATTCCAGAGACAAGATA+CGG 0.557194 3_3:+81634638 None:intergenic
GCAAAATGGGTGAAGGTTAG+CGG 0.558808 3_3:-81633378 Msa0477450:CDS
ATACAACAAATCAGTTAATG+AGG 0.558835 3_3:+81630339 None:intergenic
CAACTGTATTTGCATTGCAA+TGG 0.562108 3_3:-81630100 Msa0477450:three_prime_UTR
TGAACCATATGCTCTGGTAG+AGG 0.562280 3_3:+81630801 None:intergenic
GAATTATGTTGTACTCGAGA+AGG 0.566792 3_3:-81630028 Msa0477450:three_prime_UTR
ATAATGCCTTGTAGAAACAA+TGG 0.567287 3_3:+81631966 None:intergenic
ATAAATGCAGTGAAGAAGCT+TGG 0.570066 3_3:-81630516 Msa0477450:CDS
CATACCTTTGGAATTGAAGG+AGG 0.570410 3_3:+81634460 None:intergenic
AATTCACGAACAAGATCCAC+AGG 0.570749 3_3:+81632473 None:intergenic
GAGAACCAGAATAAACCGTT+GGG 0.571649 3_3:+81634679 None:intergenic
ATAGCTCCATTGTTTCTACA+AGG 0.573657 3_3:-81631972 Msa0477450:CDS
TCATGGAAAGGGAACGAACT+CGG 0.583235 3_3:-81634522 Msa0477450:CDS
CATTCTCATTGAGTTATGCA+CGG 0.584438 3_3:-81630974 Msa0477450:intron
CACGTCATGTTGAGTCGTCA+AGG 0.590275 3_3:-81630363 Msa0477450:CDS
GGTACCCAGAAATTTGGCAG+TGG 0.594065 3_3:-81634364 Msa0477450:CDS
TCCACCTCCTTCAATTCCAA+AGG 0.594074 3_3:-81634464 Msa0477450:intron
GCCCGAAGGAGCTGTTTCAA+GGG 0.594720 3_3:-81630544 Msa0477450:CDS
TCAAATATTGATGTCCCAGT+AGG 0.595403 3_3:+81629896 None:intergenic
AGTTGTGGCGAATATGAAGA+TGG 0.597357 3_3:+81634610 None:intergenic
GGAGAACCAGAATAAACCGT+TGG 0.599407 3_3:+81634678 None:intergenic
ACGGGATTCCTGTGTAAGAA+CGG 0.603623 3_3:+81634657 None:intergenic
ATTCTCAGCAAAATGGGTGA+AGG 0.606392 3_3:-81633385 Msa0477450:intron
AATTGAACCCTAACTCCCAA+CGG 0.606887 3_3:-81634694 Msa0477450:five_prime_UTR
ATACCAAGTACCTTACAACT+AGG 0.608609 3_3:+81632167 None:intergenic
TTGGCAGTGGTTGGTGACGG+TGG 0.610790 3_3:-81634351 Msa0477450:CDS
CGAGCAGTAATGCGATAGGA+TGG 0.610949 3_3:+81630298 None:intergenic
CCAACACTCCACAAATCACA+TGG 0.613754 3_3:+81631000 None:intergenic
TTTCTGGCTTCAGGTCGGTG+TGG 0.618594 3_3:+81632225 None:intergenic
GTATTTGCATTGCAATGGAT+GGG 0.622478 3_3:-81630095 Msa0477450:three_prime_UTR
TTGGCGAGCAGTAATGCGAT+AGG 0.627298 3_3:+81630294 None:intergenic
GTACTCGAGAAGGCTTGAGA+AGG 0.627796 3_3:-81630018 Msa0477450:three_prime_UTR
AATTTGGCAGTGGTTGGTGA+CGG 0.628481 3_3:-81634354 Msa0477450:CDS
CGTCTTGTGAAGAGTGATGT+GGG 0.632369 3_3:-81633156 Msa0477450:CDS
CGTTACCTAAGATAACCTCA+GGG 0.633079 3_3:+81631938 None:intergenic
ACATGATGAATAAACGCTTG+AGG 0.635050 3_3:+81632402 None:intergenic
AGAAGAGACGACGATCGTGA+TGG 0.636898 3_3:-81634300 Msa0477450:CDS
TAATTCCAGAGACAAGATAC+GGG 0.637955 3_3:+81634639 None:intergenic
AGCGTGGATCACGACTAAGA+TGG 0.638785 3_3:-81630566 Msa0477450:CDS
ACATTCCAAAACTCGACCGA+AGG 0.639593 3_3:+81633275 None:intergenic
TTTGCATTGCAATGGATGGG+TGG 0.644054 3_3:-81630092 Msa0477450:three_prime_UTR
GCTGCATCCCAAGCGAGACG+AGG 0.645412 3_3:+81634493 None:intergenic
ATGACATTCCAGGTCTAGGG+TGG 0.654171 3_3:-81631029 Msa0477450:intron
TCGCGATGCAGCAATGATCG+AGG 0.670546 3_3:-81633193 Msa0477450:CDS
TAAATACTGCCCATTCCCTG+TGG 0.681993 3_3:-81632489 Msa0477450:CDS
TCACGACTAAGATGGCCCGA+AGG 0.691921 3_3:-81630558 Msa0477450:CDS
ACGTCTTGTGAAGAGTGATG+TGG 0.700818 3_3:-81633157 Msa0477450:CDS
AGAGTGATGTGGGATGCTCA+CGG 0.726542 3_3:-81633146 Msa0477450:intron
AAGGCATTATAGAGCCCCTG+AGG 0.743741 3_3:-81631953 Msa0477450:CDS
GTTACCTAAGATAACCTCAG+GGG 0.756792 3_3:+81631939 None:intergenic
ATTCACGAACAAGATCCACA+GGG 0.786775 3_3:+81632474 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTAAAATATTAGTTTGT+TGG - chr3_3:81630745-81630764 Msa0477450:intron 10.0%
!!! TTTCTTTAGTTTAATAAAAT+AGG - chr3_3:81631064-81631083 Msa0477450:intron 10.0%
!!! TTCTTTAGTTTAATAAAATA+GGG - chr3_3:81631065-81631084 Msa0477450:intron 10.0%
!!! TTTTGTATTATTTTGAAAAT+GGG - chr3_3:81631784-81631803 Msa0477450:intron 10.0%
!! AGAAAAAGTTAAAAATAATT+GGG + chr3_3:81632978-81632997 None:intergenic 10.0%
!! AAGAAAAAGTTAAAAATAAT+TGG + chr3_3:81632979-81632998 None:intergenic 10.0%
!! TTATTGTAAATTGCAATATT+CGG + chr3_3:81629893-81629912 None:intergenic 15.0%
!!! TAATATTTTAAATAGCACAT+AGG + chr3_3:81630739-81630758 None:intergenic 15.0%
!!! AAGTTTGATTTTAAAAAAGA+GGG + chr3_3:81630819-81630838 None:intergenic 15.0%
!!! AAAGTTTGATTTTAAAAAAG+AGG + chr3_3:81630820-81630839 None:intergenic 15.0%
!!! TCTTTAGTTTAATAAAATAG+GGG - chr3_3:81631066-81631085 Msa0477450:intron 15.0%
!!! GTTTTGTATTATTTTGAAAA+TGG - chr3_3:81631783-81631802 Msa0477450:intron 15.0%
!! TTTAGAAAATCAAATAAACT+TGG + chr3_3:81632092-81632111 None:intergenic 15.0%
!!! TGTTTTATTATTATATCTCT+TGG - chr3_3:81632225-81632244 Msa0477450:CDS 15.0%
!! TTTAATGAAAATTACTTGAT+TGG - chr3_3:81632510-81632529 Msa0477450:CDS 15.0%
!!! TTATTTTTTTTTTTCGTGAA+AGG + chr3_3:81633327-81633346 None:intergenic 15.0%
!!! AAGTGATTTAATTAACTTTT+TGG + chr3_3:81633404-81633423 None:intergenic 15.0%
!! AATTATAATATTTAATCACC+TGG + chr3_3:81633940-81633959 None:intergenic 15.0%
!!! AAATTTTTATATCATTCAGA+GGG - chr3_3:81634671-81634690 Msa0477450:five_prime_UTR 15.0%
!! AATTCAACCATTAATGTAAA+TGG - chr3_3:81630053-81630072 Msa0477450:three_prime_UTR 20.0%
!! TTAGATACCATTTACATTAA+TGG + chr3_3:81630063-81630082 None:intergenic 20.0%
!! ACACATTAAATTGAGAAATA+GGG + chr3_3:81630439-81630458 None:intergenic 20.0%
!!! TTCATGGGTTTTATAAAATA+GGG + chr3_3:81630789-81630808 None:intergenic 20.0%
!!! TTTCATGGGTTTTATAAAAT+AGG + chr3_3:81630790-81630809 None:intergenic 20.0%
!!! AGTTTGATTTTAAAAAAGAG+GGG + chr3_3:81630818-81630837 None:intergenic 20.0%
!!! ACAAGCTAATATTTTCAAAA+GGG + chr3_3:81630854-81630873 None:intergenic 20.0%
!!! AACAAGCTAATATTTTCAAA+AGG + chr3_3:81630855-81630874 None:intergenic 20.0%
!! AAAACAAATGTGAAAATAGA+GGG - chr3_3:81631036-81631055 Msa0477450:intron 20.0%
!!! CTTTAGTTTAATAAAATAGG+GGG - chr3_3:81631067-81631086 Msa0477450:intron 20.0%
!!! TTTTATCAAAACAAACTAAC+TGG + chr3_3:81631706-81631725 None:intergenic 20.0%
!! ACAAAATTGCAACATAAATT+GGG + chr3_3:81631930-81631949 None:intergenic 20.0%
!! AACAAAATTGCAACATAAAT+TGG + chr3_3:81631931-81631950 None:intergenic 20.0%
!!! TAACTTTTTCTTATACACTT+TGG - chr3_3:81632987-81633006 Msa0477450:CDS 20.0%
!!! TTTATTTTCACGAAAATTCA+CGG - chr3_3:81633126-81633145 Msa0477450:intron 20.0%
!!! ACACTATTTTTTTTGTTTGA+GGG + chr3_3:81633284-81633303 None:intergenic 20.0%
!!! AACACTATTTTTTTTGTTTG+AGG + chr3_3:81633285-81633304 None:intergenic 20.0%
!! ACTTATAAAAGAGAGTTTAA+AGG + chr3_3:81633367-81633386 None:intergenic 20.0%
!! ATGAAAAATGCTAAATAGTA+CGG + chr3_3:81633493-81633512 None:intergenic 20.0%
!!! TTTTCATTAGTAAAACTGTT+AGG - chr3_3:81633506-81633525 Msa0477450:intron 20.0%
!!! TATGTAATATATTTTCAGCA+TGG - chr3_3:81633839-81633858 Msa0477450:intron 20.0%
!!! TTAAAACACAGTTAATTTGA+TGG + chr3_3:81633881-81633900 None:intergenic 20.0%
!! ATAACCATTCAAATAACATA+AGG + chr3_3:81634386-81634405 None:intergenic 20.0%
!! AATAATTATGTTCAATAGAG+TGG + chr3_3:81634551-81634570 None:intergenic 20.0%
!! ACTCTATTGAACATAATTAT+TGG - chr3_3:81634550-81634569 Msa0477450:exon 20.0%
!!! TTGGATACATTCTAATTTTT+TGG + chr3_3:81634645-81634664 None:intergenic 20.0%
!!! GAAATTTTTATATCATTCAG+AGG - chr3_3:81634670-81634689 Msa0477450:five_prime_UTR 20.0%
!! CTAACAAAAATTGATAGTTG+TGG + chr3_3:81630015-81630034 None:intergenic 25.0%
! GTAAATGGTATCTAATTTCA+TGG - chr3_3:81630068-81630087 Msa0477450:three_prime_UTR 25.0%
! CACACATTAAATTGAGAAAT+AGG + chr3_3:81630440-81630459 None:intergenic 25.0%
!!! TGATTCAGCAAAATTGATTT+TGG - chr3_3:81630498-81630517 Msa0477450:intron 25.0%
!!! GTTTGATTTTAAAAAAGAGG+GGG + chr3_3:81630817-81630836 None:intergenic 25.0%
!! AAGCTAATATTTTCAAAAGG+GGG + chr3_3:81630852-81630871 None:intergenic 25.0%
!! CAAGCTAATATTTTCAAAAG+GGG + chr3_3:81630853-81630872 None:intergenic 25.0%
! TTGTCTTAAGATTCAACATT+GGG + chr3_3:81630935-81630954 None:intergenic 25.0%
! TTTGTCTTAAGATTCAACAT+TGG + chr3_3:81630936-81630955 None:intergenic 25.0%
!! CTCTATTTTCACATTTGTTT+TGG + chr3_3:81631037-81631056 None:intergenic 25.0%
! CAAAACAAATGTGAAAATAG+AGG - chr3_3:81631035-81631054 Msa0477450:intron 25.0%
!! ACTAGGCTTAATTATACTTT+TGG + chr3_3:81631094-81631113 None:intergenic 25.0%
! AACAAACAAACAAACAAACT+AGG + chr3_3:81631111-81631130 None:intergenic 25.0%
!!! TTTTTTCTCACTCTTCAATT+TGG - chr3_3:81631139-81631158 Msa0477450:intron 25.0%
!!! TTCAATTTGGTGTTTATGAA+AGG - chr3_3:81631152-81631171 Msa0477450:intron 25.0%
! AGATAAAATTCTCAGCAAAA+TGG - chr3_3:81631215-81631234 Msa0477450:intron 25.0%
! GATAAAATTCTCAGCAAAAT+GGG - chr3_3:81631216-81631235 Msa0477450:intron 25.0%
!!! CTAGAGTTTTTTTTTTGGAA+AGG - chr3_3:81631507-81631526 Msa0477450:intron 25.0%
!!! TTTGTGTTGCTTGTTTTTTT+AGG - chr3_3:81631882-81631901 Msa0477450:intron 25.0%
!!! GAAACAAGAAGTATATTTTC+TGG + chr3_3:81632401-81632420 None:intergenic 25.0%
!! TAGGTAACGAAATATGTTTT+TGG - chr3_3:81632683-81632702 Msa0477450:intron 25.0%
!!! TAACGAAATATGTTTTTGGT+TGG - chr3_3:81632687-81632706 Msa0477450:intron 25.0%
! TCATCAACAAGAAATAGATT+TGG + chr3_3:81633065-81633084 None:intergenic 25.0%
! CCTGCATAAAGAATAATAAT+CGG + chr3_3:81634215-81634234 None:intergenic 25.0%
! ATACAACAAATCAGTTAATG+AGG + chr3_3:81634271-81634290 None:intergenic 25.0%
!!! TCATTAACTGATTTGTTGTA+TGG - chr3_3:81634270-81634289 Msa0477450:CDS 25.0%
!! TTCAAATAACATAAGGCATT+TGG + chr3_3:81634379-81634398 None:intergenic 25.0%
!! AATGCCTTATGTTATTTGAA+TGG - chr3_3:81634379-81634398 Msa0477450:intron 25.0%
!!! GACTACAATTTTGCTTTAAA+TGG - chr3_3:81634416-81634435 Msa0477450:intron 25.0%
! TGAACATAATTATTGGATAG+AGG - chr3_3:81634557-81634576 Msa0477450:exon 25.0%
! GATATAAAAATTTCAGCGTT+TGG + chr3_3:81634664-81634683 None:intergenic 25.0%
TGGTATCTAATTTCATGGAA+AGG - chr3_3:81630073-81630092 Msa0477450:three_prime_UTR 30.0%
GGTATCTAATTTCATGGAAA+GGG - chr3_3:81630074-81630093 Msa0477450:three_prime_UTR 30.0%
!! TTACATACCTTTGGAATTGA+AGG + chr3_3:81630153-81630172 None:intergenic 30.0%
GAGGATAATTTACATACCTT+TGG + chr3_3:81630162-81630181 None:intergenic 30.0%
AATCAAGAGAGTGAAATTGA+AGG + chr3_3:81630184-81630203 None:intergenic 30.0%
!! ATTTTAGGTACCCAGAAATT+TGG - chr3_3:81630237-81630256 Msa0477450:three_prime_UTR 30.0%
GAAAGAAGTTAGTTACATCT+AGG + chr3_3:81630367-81630386 None:intergenic 30.0%
TAAGCACTTATTAGACTGTT+TGG + chr3_3:81630654-81630673 None:intergenic 30.0%
!!! ATTAAGGGTCTTTTTTGGAT+TGG + chr3_3:81630700-81630719 None:intergenic 30.0%
!!! CACAAATTAAGGGTCTTTTT+TGG + chr3_3:81630705-81630724 None:intergenic 30.0%
AGCATCAAGTCACAAATTAA+GGG + chr3_3:81630715-81630734 None:intergenic 30.0%
! AGCTAATATTTTCAAAAGGG+GGG + chr3_3:81630851-81630870 None:intergenic 30.0%
TGTCTTAAGATTCAACATTG+GGG + chr3_3:81630934-81630953 None:intergenic 30.0%
!!! GATACCTAAACTCACTTTTT+TGG - chr3_3:81630967-81630986 Msa0477450:intron 30.0%
GAATCCAAAAAAGTGAGTTT+AGG + chr3_3:81630974-81630993 None:intergenic 30.0%
! TTCCAAAAGCCACAATTTTT+AGG - chr3_3:81630991-81631010 Msa0477450:CDS 30.0%
! TCCAAAAGCCACAATTTTTA+GGG - chr3_3:81630992-81631011 Msa0477450:CDS 30.0%
!! TTTGGTGTTTATGAAAGGTT+TGG - chr3_3:81631157-81631176 Msa0477450:intron 30.0%
!!! ACCTGCTAGAGTTTTTTTTT+TGG - chr3_3:81631502-81631521 Msa0477450:intron 30.0%
TCCAAAAAAAAAACTCTAGC+AGG + chr3_3:81631506-81631525 None:intergenic 30.0%
TTACAATGCATATGTGATTC+CGG + chr3_3:81631633-81631652 None:intergenic 30.0%
CAAAACAAACTAACTGGATA+TGG + chr3_3:81631700-81631719 None:intergenic 30.0%
!!! TTTTTTAGGTCAGGAAGTAT+AGG - chr3_3:81631896-81631915 Msa0477450:intron 30.0%
ATCTATGAATAAATCCCACA+TGG + chr3_3:81631999-81632018 None:intergenic 30.0%
! TTCCTTTCAACGCATTTTAA+TGG - chr3_3:81632039-81632058 Msa0477450:CDS 30.0%
AAATTACTTGATTGGTACAG+AGG - chr3_3:81632518-81632537 Msa0477450:CDS 30.0%
AATTACTTGATTGGTACAGA+GGG - chr3_3:81632519-81632538 Msa0477450:CDS 30.0%
TGTCAGATGAAACACAATTT+AGG - chr3_3:81632545-81632564 Msa0477450:intron 30.0%
ATAATGCCTTGTAGAAACAA+TGG + chr3_3:81632644-81632663 None:intergenic 30.0%
! CTACTGGAAACATTTTTAAC+AGG + chr3_3:81632793-81632812 None:intergenic 30.0%
AGGATAATATAAGATGAGCT+GGG + chr3_3:81632855-81632874 None:intergenic 30.0%
TAGGATAATATAAGATGAGC+TGG + chr3_3:81632856-81632875 None:intergenic 30.0%
ATAGTGAAGATCAAAGATCT+AGG + chr3_3:81632875-81632894 None:intergenic 30.0%
GCACAATCAAAATTGGAAAT+TGG + chr3_3:81632941-81632960 None:intergenic 30.0%
! CTTTTTCTTATACACTTTGG+TGG - chr3_3:81632990-81633009 Msa0477450:CDS 30.0%
CATAATAATAGATACCGTTC+AGG + chr3_3:81633172-81633191 None:intergenic 30.0%
TGCAATTCAACCAAAGAAAA+AGG - chr3_3:81633211-81633230 Msa0477450:CDS 30.0%
AATTCAACCAAAGAAAAAGG+TGG - chr3_3:81633214-81633233 Msa0477450:CDS 30.0%
GGGAATTAATCTTAAGCAAA+CGG + chr3_3:81633264-81633283 None:intergenic 30.0%
! TTTTCCATCTATCAAGATGT+AGG - chr3_3:81633660-81633679 Msa0477450:intron 30.0%
GTTTCAGACTCATGAAAATT+TGG - chr3_3:81633751-81633770 Msa0477450:intron 30.0%
!!! TCTTCTGTATCGTTAGTTTT+TGG - chr3_3:81634139-81634158 Msa0477450:intron 30.0%
!!! CTTCTGTATCGTTAGTTTTT+GGG - chr3_3:81634140-81634159 Msa0477450:intron 30.0%
CCGATTATTATTCTTTATGC+AGG - chr3_3:81634212-81634231 Msa0477450:intron 30.0%
! TAAGTTGGAATCCTAAAGAA+GGG + chr3_3:81634351-81634370 None:intergenic 30.0%
!! TTAAGTTGGAATCCTAAAGA+AGG + chr3_3:81634352-81634371 None:intergenic 30.0%
GGATTTATCATTTATTGCAG+TGG - chr3_3:81634437-81634456 Msa0477450:intron 30.0%
TAATTCCAGAGACAAGATAC+GGG + chr3_3:81629971-81629990 None:intergenic 35.0%
GTAATTCCAGAGACAAGATA+CGG + chr3_3:81629972-81629991 None:intergenic 35.0%
GGCCATTATGTCTTTAATCT+CGG - chr3_3:81630328-81630347 Msa0477450:CDS 35.0%
TTAATGTGTGTTTGCTTCAC+TGG - chr3_3:81630450-81630469 Msa0477450:intron 35.0%
CAGCATCAAGTCACAAATTA+AGG + chr3_3:81630716-81630735 None:intergenic 35.0%
!! ATTTTGGGGGCAAAAAAGAT+GGG + chr3_3:81630894-81630913 None:intergenic 35.0%
! GCTAAAAATCACCATTTTGG+GGG + chr3_3:81630907-81630926 None:intergenic 35.0%
! CGCTAAAAATCACCATTTTG+GGG + chr3_3:81630908-81630927 None:intergenic 35.0%
! GCGCTAAAAATCACCATTTT+GGG + chr3_3:81630909-81630928 None:intergenic 35.0%
! AGCGCTAAAAATCACCATTT+TGG + chr3_3:81630910-81630929 None:intergenic 35.0%
! GTTTTTCGCCCTAAAAATTG+TGG + chr3_3:81631003-81631022 None:intergenic 35.0%
!!! TTTTTAGGGCGAAAAACATG+AGG - chr3_3:81631006-81631025 Msa0477450:CDS 35.0%
ATTATATGGGTCTTCAACTC+AGG + chr3_3:81631740-81631759 None:intergenic 35.0%
GTTGAAGACCCATATAATAC+CGG - chr3_3:81631742-81631761 Msa0477450:intron 35.0%
TTGAAGACCCATATAATACC+GGG - chr3_3:81631743-81631762 Msa0477450:intron 35.0%
!! AAATTAGTTCTGTTCTCCAC+CGG - chr3_3:81631840-81631859 Msa0477450:intron 35.0%
!!! GTTGCTTGTTTTTTTAGGTC+AGG - chr3_3:81631887-81631906 Msa0477450:intron 35.0%
GTGGGATTTATTCATAGATC+TGG - chr3_3:81632000-81632019 Msa0477450:CDS 35.0%
CACCATTAAAATGCGTTGAA+AGG + chr3_3:81632044-81632063 None:intergenic 35.0%
!!! CGCATTTTAATGGTGTTATC+AGG - chr3_3:81632049-81632068 Msa0477450:CDS 35.0%
ACATGATGAATAAACGCTTG+AGG + chr3_3:81632208-81632227 None:intergenic 35.0%
!!! TATATTTTCTGGCTTCAGGT+CGG + chr3_3:81632390-81632409 None:intergenic 35.0%
!!! GAAGTATATTTTCTGGCTTC+AGG + chr3_3:81632394-81632413 None:intergenic 35.0%
TGTAAAGCTTCCTAGTTGTA+AGG - chr3_3:81632430-81632449 Msa0477450:CDS 35.0%
ATACCAAGTACCTTACAACT+AGG + chr3_3:81632443-81632462 None:intergenic 35.0%
!! GCGATTAAGCTGATTGATTT+TGG - chr3_3:81632586-81632605 Msa0477450:intron 35.0%
TTGTAGAAACAATGGAGCTA+TGG + chr3_3:81632636-81632655 None:intergenic 35.0%
!! ATAGCTCCATTGTTTCTACA+AGG - chr3_3:81632635-81632654 Msa0477450:intron 35.0%
ATATAAGATGAGCTGGGAAA+TGG + chr3_3:81632849-81632868 None:intergenic 35.0%
TGTCAGTCATTACAGTACAA+AGG + chr3_3:81632913-81632932 None:intergenic 35.0%
! CATGAGAGCACAATCAAAAT+TGG + chr3_3:81632948-81632967 None:intergenic 35.0%
!! TTTTGATTGTGCTCTCATGA+TGG - chr3_3:81632949-81632968 Msa0477450:intron 35.0%
! AAGCGAAGTGCTATATAGTA+CGG - chr3_3:81633101-81633120 Msa0477450:intron 35.0%
GAACATATAAGCAACCTGAA+CGG - chr3_3:81633155-81633174 Msa0477450:CDS 35.0%
AACGGTGCAACAAATTGAAA+CGG + chr3_3:81633246-81633265 None:intergenic 35.0%
! TGCATCTAAAATGACATTCC+AGG - chr3_3:81633568-81633587 Msa0477450:intron 35.0%
TAAAATGACATTCCAGGTCT+AGG - chr3_3:81633574-81633593 Msa0477450:intron 35.0%
AAAATGACATTCCAGGTCTA+GGG - chr3_3:81633575-81633594 Msa0477450:intron 35.0%
CATTCTCATTGAGTTATGCA+CGG - chr3_3:81633633-81633652 Msa0477450:intron 35.0%
!! ATGTAGGCATGTTTTGAATC+TGG - chr3_3:81633676-81633695 Msa0477450:intron 35.0%
!!! TGGTTTTAGCATTCTAACTG+TGG - chr3_3:81633705-81633724 Msa0477450:intron 35.0%
! TAACTGTGGAACTTTTGACA+GGG - chr3_3:81633719-81633738 Msa0477450:intron 35.0%
!! TAAGTTATGAAGCATTGACC+AGG - chr3_3:81633919-81633938 Msa0477450:intron 35.0%
ACGGAAAAATATTTCAAGCG+TGG - chr3_3:81634025-81634044 Msa0477450:intron 35.0%
ATAAATGCAGTGAAGAAGCT+TGG - chr3_3:81634091-81634110 Msa0477450:intron 35.0%
!!! AGGCATTTGGCTTTTTAAGT+TGG + chr3_3:81634366-81634385 None:intergenic 35.0%
CATTGCAATGCAAATACAGT+TGG + chr3_3:81634509-81634528 None:intergenic 35.0%
CAACTGTATTTGCATTGCAA+TGG - chr3_3:81634507-81634526 Msa0477450:CDS 35.0%
TGTATTTGCATTGCAATGGA+TGG - chr3_3:81634511-81634530 Msa0477450:CDS 35.0%
GTATTTGCATTGCAATGGAT+GGG - chr3_3:81634512-81634531 Msa0477450:CDS 35.0%
GAATTATGTTGTACTCGAGA+AGG - chr3_3:81634579-81634598 Msa0477450:five_prime_UTR 35.0%
TCAAATATTGATGTCCCAGT+AGG + chr3_3:81634714-81634733 None:intergenic 35.0%
ACTGGGACATCAATATTTGA+AGG - chr3_3:81634714-81634733 Msa0477450:five_prime_UTR 35.0%
AATTGAACCCTAACTCCCAA+CGG - chr3_3:81629913-81629932 Msa0477450:three_prime_UTR 40.0%
GAATAAACCGTTGGGAGTTA+GGG + chr3_3:81629923-81629942 None:intergenic 40.0%
AGAATAAACCGTTGGGAGTT+AGG + chr3_3:81629924-81629943 None:intergenic 40.0%
TAACTCCCAACGGTTTATTC+TGG - chr3_3:81629923-81629942 Msa0477450:three_prime_UTR 40.0%
GAGAACCAGAATAAACCGTT+GGG + chr3_3:81629931-81629950 None:intergenic 40.0%
AGTTGTGGCGAATATGAAGA+TGG + chr3_3:81630000-81630019 None:intergenic 40.0%
!! CATACCTTTGGAATTGAAGG+AGG + chr3_3:81630150-81630169 None:intergenic 40.0%
CAAGAGAGTGAAATTGAAGG+AGG + chr3_3:81630181-81630200 None:intergenic 40.0%
CGCCGAGATTAAAGACATAA+TGG + chr3_3:81630333-81630352 None:intergenic 40.0%
AATAAGCTGAAAACAGCTCG+TGG - chr3_3:81630598-81630617 Msa0477450:intron 40.0%
!!! TGTTGGCTTGATTGCACTTT+TGG - chr3_3:81630762-81630781 Msa0477450:intron 40.0%
!! AAAGAGGGGGCTATTTTCAT+GGG + chr3_3:81630804-81630823 None:intergenic 40.0%
!! AAAAGAGGGGGCTATTTTCA+TGG + chr3_3:81630805-81630824 None:intergenic 40.0%
!! CATTTTGGGGGCAAAAAAGA+TGG + chr3_3:81630895-81630914 None:intergenic 40.0%
!!! CATCTTTTTTGCCCCCAAAA+TGG - chr3_3:81630893-81630912 Msa0477450:intron 40.0%
! GCCCTAAAAATTGTGGCTTT+TGG + chr3_3:81630996-81631015 None:intergenic 40.0%
ATTCTCAGCAAAATGGGTGA+AGG - chr3_3:81631222-81631241 Msa0477450:intron 40.0%
CTTGATCGCTACATAATCTC+TGG + chr3_3:81631371-81631390 None:intergenic 40.0%
CAGAGATTATGTAGCGATCA+AGG - chr3_3:81631369-81631388 Msa0477450:intron 40.0%
AAAGGATACCTGCTAGAGTT+TGG - chr3_3:81631525-81631544 Msa0477450:intron 40.0%
ATCAGTAACCAAACTCTAGC+AGG + chr3_3:81631536-81631555 None:intergenic 40.0%
!! TCCTGAATTGGTTCGATTAC+CGG - chr3_3:81631611-81631630 Msa0477450:intron 40.0%
! TGGGTGTCATCATTCATGAT+TGG - chr3_3:81631803-81631822 Msa0477450:intron 40.0%
! GGGTGTCATCATTCATGATT+GGG - chr3_3:81631804-81631823 Msa0477450:intron 40.0%
AGAACAAGAAGACTATGTGC+CGG + chr3_3:81631862-81631881 None:intergenic 40.0%
TATGTACACACATGTCCATG+TGG - chr3_3:81631981-81632000 Msa0477450:CDS 40.0%
ATGTACACACATGTCCATGT+GGG - chr3_3:81631982-81632001 Msa0477450:CDS 40.0%
TCATAGATCTGGAAACTGAG+TGG - chr3_3:81632011-81632030 Msa0477450:CDS 40.0%
! TATCAGGTCTTTGAGAAGCT+TGG - chr3_3:81632065-81632084 Msa0477450:CDS 40.0%
ATTCACGAACAAGATCCACA+GGG + chr3_3:81632136-81632155 None:intergenic 40.0%
AATTCACGAACAAGATCCAC+AGG + chr3_3:81632137-81632156 None:intergenic 40.0%
GTGGATCTTGTTCGTGAATT+TGG - chr3_3:81632137-81632156 Msa0477450:intron 40.0%
! TGAATTTGGACGACAGCTTT+TGG - chr3_3:81632151-81632170 Msa0477450:intron 40.0%
ACAAAGATACACTGCATCCT+GGG + chr3_3:81632294-81632313 None:intergenic 40.0%
AACAAAGATACACTGCATCC+TGG + chr3_3:81632295-81632314 None:intergenic 40.0%
! CTTCCTAGTTGTAAGGTACT+TGG - chr3_3:81632437-81632456 Msa0477450:CDS 40.0%
AGCTTAATCGCACTAGACTT+AGG + chr3_3:81632577-81632596 None:intergenic 40.0%
GTTACCTAAGATAACCTCAG+GGG + chr3_3:81632671-81632690 None:intergenic 40.0%
CGTTACCTAAGATAACCTCA+GGG + chr3_3:81632672-81632691 None:intergenic 40.0%
TCGTTACCTAAGATAACCTC+AGG + chr3_3:81632673-81632692 None:intergenic 40.0%
!!! GTTTTTGGTTGGTCACAATG+TGG - chr3_3:81632698-81632717 Msa0477450:intron 40.0%
! AGCGAAGTGCTATATAGTAC+GGG - chr3_3:81633102-81633121 Msa0477450:intron 40.0%
GCTAAATAGTACGGAACTTG+TGG + chr3_3:81633484-81633503 None:intergenic 40.0%
CATGCCTACATCTTGATAGA+TGG + chr3_3:81633667-81633686 None:intergenic 40.0%
!! TGTTTTGAATCTGGAACAGC+TGG - chr3_3:81633685-81633704 Msa0477450:intron 40.0%
! CTAACTGTGGAACTTTTGAC+AGG - chr3_3:81633718-81633737 Msa0477450:intron 40.0%
! TCATGAAAATTTGGAGCACC+TGG - chr3_3:81633760-81633779 Msa0477450:intron 40.0%
!! GCAATGATGGAGAGAGTTTT+GGG - chr3_3:81633782-81633801 Msa0477450:intron 40.0%
GATCTTTGAACCATATGCTC+TGG + chr3_3:81633815-81633834 None:intergenic 40.0%
TTTGCTTCACAATATCTCGC+AGG - chr3_3:81633999-81634018 Msa0477450:intron 40.0%
TTGCTTCACAATATCTCGCA+GGG - chr3_3:81634000-81634019 Msa0477450:intron 40.0%
! GAAGAAGCTTGGTGATCTTA+AGG - chr3_3:81634102-81634121 Msa0477450:intron 40.0%
CTCTTGATCATCCCTTCTTT+AGG - chr3_3:81634337-81634356 Msa0477450:CDS 40.0%
GGAGAACCAGAATAAACCGT+TGG + chr3_3:81629932-81629951 None:intergenic 45.0%
ACGGGATTCCTGTGTAAGAA+CGG + chr3_3:81629953-81629972 None:intergenic 45.0%
TCATGGAAAGGGAACGAACT+CGG - chr3_3:81630085-81630104 Msa0477450:three_prime_UTR 45.0%
TCCACCTCCTTCAATTCCAA+AGG - chr3_3:81630143-81630162 Msa0477450:three_prime_UTR 45.0%
!! ACCTTTGGAATTGAAGGAGG+TGG + chr3_3:81630147-81630166 None:intergenic 45.0%
CCAACCACTGCCAAATTTCT+GGG + chr3_3:81630250-81630269 None:intergenic 45.0%
ACCAACCACTGCCAAATTTC+TGG + chr3_3:81630251-81630270 None:intergenic 45.0%
!! AATTTGGCAGTGGTTGGTGA+CGG - chr3_3:81630253-81630272 Msa0477450:exon 45.0%
TTAGGGCGAAAAACATGAGG+CGG - chr3_3:81631009-81631028 Msa0477450:CDS 45.0%
GCAAAATGGGTGAAGGTTAG+CGG - chr3_3:81631229-81631248 Msa0477450:intron 45.0%
ACATTCCAAAACTCGACCGA+AGG + chr3_3:81631335-81631354 None:intergenic 45.0%
!!! TCGGTCGAGTTTTGGAATGT+TGG - chr3_3:81631335-81631354 Msa0477450:intron 45.0%
!!! CGGTCGAGTTTTGGAATGTT+GGG - chr3_3:81631336-81631355 Msa0477450:intron 45.0%
ACGTCTTGTGAAGAGTGATG+TGG - chr3_3:81631450-81631469 Msa0477450:intron 45.0%
CGTCTTGTGAAGAGTGATGT+GGG - chr3_3:81631451-81631470 Msa0477450:intron 45.0%
GCTGTGTACAGATCCTGAAT+TGG - chr3_3:81631599-81631618 Msa0477450:intron 45.0%
TCCGGTAATCGAACCAATTC+AGG + chr3_3:81631615-81631634 None:intergenic 45.0%
AAGACCCATATAATACCGGG+TGG - chr3_3:81631746-81631765 Msa0477450:intron 45.0%
TAAATACTGCCCATTCCCTG+TGG - chr3_3:81632118-81632137 Msa0477450:intron 45.0%
GAACAAGATCCACAGGGAAT+GGG + chr3_3:81632130-81632149 None:intergenic 45.0%
TGGAATCTGTAGCATGTCTG+TGG - chr3_3:81632171-81632190 Msa0477450:intron 45.0%
GGGACAAACTAAGCAAGCTA+AGG + chr3_3:81632274-81632293 None:intergenic 45.0%
!! TAGCTTGCTTAGTTTGTCCC+AGG - chr3_3:81632274-81632293 Msa0477450:intron 45.0%
GTCAAGAACGACATTTGCTC+TGG + chr3_3:81632753-81632772 None:intergenic 45.0%
!! GTGCTGACCACCTTTTTCTT+TGG + chr3_3:81633224-81633243 None:intergenic 45.0%
TTCACAGACAGGCTAAACAG+CGG + chr3_3:81633452-81633471 None:intergenic 45.0%
! AGCCTGTCTGTGAATTTTCG+TGG - chr3_3:81633458-81633477 Msa0477450:intron 45.0%
GGTCATCTCCATGTGATTTG+TGG - chr3_3:81633599-81633618 Msa0477450:intron 45.0%
CCAACACTCCACAAATCACA+TGG + chr3_3:81633610-81633629 None:intergenic 45.0%
! CCATGTGATTTGTGGAGTGT+TGG - chr3_3:81633607-81633626 Msa0477450:intron 45.0%
CTCATTGAGTTATGCACGGT+TGG - chr3_3:81633637-81633656 Msa0477450:intron 45.0%
AAACTCTCTCCATCATTGCC+AGG + chr3_3:81633781-81633800 None:intergenic 45.0%
!! GGCAATGATGGAGAGAGTTT+TGG - chr3_3:81633781-81633800 Msa0477450:intron 45.0%
TGAACCATATGCTCTGGTAG+AGG + chr3_3:81633809-81633828 None:intergenic 45.0%
TGCTTCACAATATCTCGCAG+GGG - chr3_3:81634001-81634020 Msa0477450:intron 45.0%
AGAAGGGATGATCAAGAGCT+TGG + chr3_3:81634335-81634354 None:intergenic 45.0%
TTTGCATTGCAATGGATGGG+TGG - chr3_3:81634515-81634534 Msa0477450:CDS 45.0%
!! ATATCATTCAGAGGGCACTC+TGG - chr3_3:81634679-81634698 Msa0477450:five_prime_UTR 45.0%
!! TATCATTCAGAGGGCACTCT+GGG - chr3_3:81634680-81634699 Msa0477450:five_prime_UTR 45.0%
!!! TAATTTTAATTTGAAATTTT+AGG - chr3_3:81630222-81630241 Msa0477450:three_prime_UTR 5.0%
! CTGGTTCTCCGTTCTTACAC+AGG - chr3_3:81629942-81629961 Msa0477450:three_prime_UTR 50.0%
GGAATCCCGTATCTTGTCTC+TGG - chr3_3:81629963-81629982 Msa0477450:three_prime_UTR 50.0%
GGTACCCAGAAATTTGGCAG+TGG - chr3_3:81630243-81630262 Msa0477450:exon 50.0%
CCCAGAAATTTGGCAGTGGT+TGG - chr3_3:81630247-81630266 Msa0477450:exon 50.0%
TCACGATCGTCGTCTCTTCT+TGG + chr3_3:81630307-81630326 None:intergenic 50.0%
AGAAGAGACGACGATCGTGA+TGG - chr3_3:81630307-81630326 Msa0477450:CDS 50.0%
! GGGGGCAAAAAAGATGGGTT+GGG + chr3_3:81630889-81630908 None:intergenic 50.0%
TGGGGGCAAAAAAGATGGGT+TGG + chr3_3:81630890-81630909 None:intergenic 50.0%
TAGGGCGAAAAACATGAGGC+GGG - chr3_3:81631010-81631029 Msa0477450:CDS 50.0%
CAGCATGTTGCTAGTGCTGT+AGG - chr3_3:81631307-81631326 Msa0477450:intron 50.0%
AGAGTGATGTGGGATGCTCA+CGG - chr3_3:81631461-81631480 Msa0477450:intron 50.0%
ATGGGTCTTCAACTCAGGTC+AGG + chr3_3:81631735-81631754 None:intergenic 50.0%
ACCCATATAATACCGGGTGG+TGG - chr3_3:81631749-81631768 Msa0477450:intron 50.0%
CCCACCACCCGGTATTATAT+GGG + chr3_3:81631753-81631772 None:intergenic 50.0%
CCCATATAATACCGGGTGGT+GGG - chr3_3:81631750-81631769 Msa0477450:intron 50.0%
CCATATAATACCGGGTGGTG+GGG - chr3_3:81631751-81631770 Msa0477450:intron 50.0%
ACAAGAAGACTATGTGCCGG+TGG + chr3_3:81631859-81631878 None:intergenic 50.0%
CGAACAAGATCCACAGGGAA+TGG + chr3_3:81632131-81632150 None:intergenic 50.0%
! AAGGCATTATAGAGCCCCTG+AGG - chr3_3:81632654-81632673 Msa0477450:intron 50.0%
AGAGCCCCTGAGGTTATCTT+AGG - chr3_3:81632664-81632683 Msa0477450:intron 50.0%
CAGAGATGTGATGCAGCTAC+TGG + chr3_3:81632809-81632828 None:intergenic 50.0%
CAGTAGCTGCATCACATCTC+TGG - chr3_3:81632807-81632826 Msa0477450:intron 50.0%
GGCCACGAAAATTCACAGAC+AGG + chr3_3:81633463-81633482 None:intergenic 50.0%
ATGACATTCCAGGTCTAGGG+TGG - chr3_3:81633578-81633597 Msa0477450:intron 50.0%
! CTGTGGAACTTTTGACAGGG+AGG - chr3_3:81633722-81633741 Msa0477450:intron 50.0%
! TTTGGAGCACCTGGCAATGA+TGG - chr3_3:81633769-81633788 Msa0477450:intron 50.0%
CACAATATCTCGCAGGGGTA+CGG - chr3_3:81634006-81634025 Msa0477450:intron 50.0%
AGCGTGGATCACGACTAAGA+TGG - chr3_3:81634041-81634060 Msa0477450:intron 50.0%
TCCCTTGAAACAGCTCCTTC+GGG + chr3_3:81634067-81634086 None:intergenic 50.0%
CTCCCTTGAAACAGCTCCTT+CGG + chr3_3:81634068-81634087 None:intergenic 50.0%
CACGTCATGTTGAGTCGTCA+AGG - chr3_3:81634244-81634263 Msa0477450:intron 50.0%
CGAGCAGTAATGCGATAGGA+TGG + chr3_3:81634312-81634331 None:intergenic 50.0%
TTGGCGAGCAGTAATGCGAT+AGG + chr3_3:81634316-81634335 None:intergenic 50.0%
GTACTCGAGAAGGCTTGAGA+AGG - chr3_3:81634589-81634608 Msa0477450:five_prime_UTR 50.0%
GAAACGACCTCGTCTCGCTT+GGG - chr3_3:81630107-81630126 Msa0477450:three_prime_UTR 55.0%
CGATCGTCGTCTCTTCTTGG+AGG + chr3_3:81630304-81630323 None:intergenic 55.0%
AGGGCGAAAAACATGAGGCG+GGG - chr3_3:81631011-81631030 Msa0477450:CDS 55.0%
GCTAGTGCTGTAGGCACCTT+CGG - chr3_3:81631316-81631335 Msa0477450:intron 55.0%
! AGGCACCTTCGGTCGAGTTT+TGG - chr3_3:81631327-81631346 Msa0477450:intron 55.0%
TCGCGATGCAGCAATGATCG+AGG - chr3_3:81631414-81631433 Msa0477450:intron 55.0%
CCCCACCACCCGGTATTATA+TGG + chr3_3:81631754-81631773 None:intergenic 55.0%
!! ATAATACCGGGTGGTGGGGT+AGG - chr3_3:81631755-81631774 Msa0477450:intron 55.0%
!! TAATACCGGGTGGTGGGGTA+GGG - chr3_3:81631756-81631775 Msa0477450:intron 55.0%
GCTTCAGGTCGGTGTGGATT+AGG + chr3_3:81632379-81632398 None:intergenic 55.0%
!! TTTCTGGCTTCAGGTCGGTG+TGG + chr3_3:81632385-81632404 None:intergenic 55.0%
TGAGCTGGGAAATGGTCGCT+GGG + chr3_3:81632841-81632860 None:intergenic 55.0%
ATGAGCTGGGAAATGGTCGC+TGG + chr3_3:81632842-81632861 None:intergenic 55.0%
GGGACCTCTACCAGAGCATA+TGG - chr3_3:81633802-81633821 Msa0477450:intron 55.0%
TCACGACTAAGATGGCCCGA+AGG - chr3_3:81634049-81634068 Msa0477450:intron 55.0%
! GCCCGAAGGAGCTGTTTCAA+GGG - chr3_3:81634063-81634082 Msa0477450:intron 55.0%
TCTGGGAAGCAAGGCCTACT+GGG - chr3_3:81634697-81634716 Msa0477450:five_prime_UTR 55.0%
GGAAACGACCTCGTCTCGCT+TGG - chr3_3:81630106-81630125 Msa0477450:three_prime_UTR 60.0%
!! TTGGCAGTGGTTGGTGACGG+TGG - chr3_3:81630256-81630275 Msa0477450:exon 60.0%
!! AATACCGGGTGGTGGGGTAG+GGG - chr3_3:81631757-81631776 Msa0477450:intron 60.0%
GGAGATGACCACCCTAGACC+TGG + chr3_3:81633589-81633608 None:intergenic 60.0%
! GGCCCGAAGGAGCTGTTTCA+AGG - chr3_3:81634062-81634081 Msa0477450:intron 60.0%
!! AGAGGGCACTCTGGGAAGCA+AGG - chr3_3:81634688-81634707 Msa0477450:five_prime_UTR 60.0%
! CTCTGGGAAGCAAGGCCTAC+TGG - chr3_3:81634696-81634715 Msa0477450:five_prime_UTR 60.0%
GCTGCATCCCAAGCGAGACG+AGG + chr3_3:81630117-81630136 None:intergenic 65.0%
CTATCCCCTACCCCACCACC+CGG + chr3_3:81631764-81631783 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 81629871 81634758 81629871 ID=Msa0477450;Name=Msa0477450
chr3_3 mRNA 81629871 81634758 81629871 ID=Msa0477450-mRNA-1;Parent=Msa0477450;Name=Msa0477450-mRNA-1;_AED=0.28;_eAED=0.28;_QI=201|0.8|0.81|1|1|1|11|387|435
chr3_3 exon 81629871 81630395 81629871 ID=Msa0477450-mRNA-1:exon:22577;Parent=Msa0477450-mRNA-1
chr3_3 exon 81630506 81630608 81630506 ID=Msa0477450-mRNA-1:exon:22576;Parent=Msa0477450-mRNA-1
chr3_3 exon 81630792 81630889 81630792 ID=Msa0477450-mRNA-1:exon:22575;Parent=Msa0477450-mRNA-1
chr3_3 exon 81630975 81631039 81630975 ID=Msa0477450-mRNA-1:exon:22574;Parent=Msa0477450-mRNA-1
chr3_3 exon 81631944 81632091 81631944 ID=Msa0477450-mRNA-1:exon:22573;Parent=Msa0477450-mRNA-1
chr3_3 exon 81632178 81632269 81632178 ID=Msa0477450-mRNA-1:exon:22572;Parent=Msa0477450-mRNA-1
chr3_3 exon 81632417 81632558 81632417 ID=Msa0477450-mRNA-1:exon:22571;Parent=Msa0477450-mRNA-1
chr3_3 exon 81632981 81633029 81632981 ID=Msa0477450-mRNA-1:exon:22570;Parent=Msa0477450-mRNA-1
chr3_3 exon 81633147 81633399 81633147 ID=Msa0477450-mRNA-1:exon:22569;Parent=Msa0477450-mRNA-1
chr3_3 exon 81634259 81634385 81634259 ID=Msa0477450-mRNA-1:exon:22568;Parent=Msa0477450-mRNA-1
chr3_3 exon 81634465 81634758 81634465 ID=Msa0477450-mRNA-1:exon:22567;Parent=Msa0477450-mRNA-1
chr3_3 five_prime_UTR 81634558 81634758 81634558 ID=Msa0477450-mRNA-1:five_prime_utr;Parent=Msa0477450-mRNA-1
chr3_3 CDS 81634465 81634557 81634465 ID=Msa0477450-mRNA-1:cds;Parent=Msa0477450-mRNA-1
chr3_3 CDS 81634259 81634385 81634259 ID=Msa0477450-mRNA-1:cds;Parent=Msa0477450-mRNA-1
chr3_3 CDS 81633147 81633399 81633147 ID=Msa0477450-mRNA-1:cds;Parent=Msa0477450-mRNA-1
chr3_3 CDS 81632981 81633029 81632981 ID=Msa0477450-mRNA-1:cds;Parent=Msa0477450-mRNA-1
chr3_3 CDS 81632417 81632558 81632417 ID=Msa0477450-mRNA-1:cds;Parent=Msa0477450-mRNA-1
chr3_3 CDS 81632178 81632269 81632178 ID=Msa0477450-mRNA-1:cds;Parent=Msa0477450-mRNA-1
chr3_3 CDS 81631944 81632091 81631944 ID=Msa0477450-mRNA-1:cds;Parent=Msa0477450-mRNA-1
chr3_3 CDS 81630975 81631039 81630975 ID=Msa0477450-mRNA-1:cds;Parent=Msa0477450-mRNA-1
chr3_3 CDS 81630792 81630889 81630792 ID=Msa0477450-mRNA-1:cds;Parent=Msa0477450-mRNA-1
chr3_3 CDS 81630506 81630608 81630506 ID=Msa0477450-mRNA-1:cds;Parent=Msa0477450-mRNA-1
chr3_3 CDS 81630258 81630395 81630258 ID=Msa0477450-mRNA-1:cds;Parent=Msa0477450-mRNA-1
chr3_3 three_prime_UTR 81629871 81630257 81629871 ID=Msa0477450-mRNA-1:three_prime_utr;Parent=Msa0477450-mRNA-1
Gene Sequence

>Msa0477450

ATGGTATCTAATTTCATGGAAAGGGAACGAACTCGGAAACGACCTCGTCTCGCTTGGGATGCAGCTGCAGCTCCACCTCCTTCAATTCCAAAGGTACCCAGAAATTTGGCAGTGGTTGGTGACGGTGGAATCGAAAGAAAGTATGCTTCGCCTCCAAGAAGAGACGACGATCGTGATGGCCATTATGTCTTTAATCTCGGCGAAAATCTCACTCCTAGATCAAAATGGGTGAAGGTTAGCGGTCAAGTGCTCTCTGAATACAAGTTTAAATTTTTATTTGACTCTGCTTGTGTCATTCAGCATGTTGCTAGTGCTGTAGGCACCTTCGGTCGAGTTTTGGAATGTTGGGATCGTCAAACCAGAGATTATGTAGCGATCAAGGTGATTAGAAGCATCAAGAAGTATCGCGATGCAGCAATGATCGAGGTTGATGTGCTTGAACGTCTTGTGAAGAGTGATGTGGGATGCTCACGCTGTGTACAGATCCTGAATTGGTTCGATTACCGGAATCACATATGCATTGTCTTTGAGAAGCTTGGACCAAGTTTATTTGATTTTCTAAAGAGAAATAAATACTGCCCATTCCCTGTGGATCTTGTTCGTGAATTTGGACGACAGCTTTTGGAATCTGTAGCATGTCTGTGGATTATTCTTGACCTCAAGCATATGCATGAACTGCGCCTAATCCACACCGACCTGAAGCCAGAAAATATACTTCTTGTTTCTTCTGACTATGTAAAGCTTCCTAGTTGTAAGAGGGTTATGTCAGATGAAACACAATTTAGGTGCTTGCCTAAGTCTAGTGCGATTAAGCTGATTGATTTTGGTAGTACTGCATTTGCAAATCAGATCCATAGCTCCATTGTTTCTACAAGGCATTATAGAGCCCCTGAGGTTATCTTAGGTCTAGGGTGGTCATCTCCATGTGATTTGTGGAGTGTTGGATGCATTCTCATTGAGTTATGCACGGGAGGAGCATTGTTTCAGACTCATGAAAATTTGGAGCACCTGGCAATGATGGAGAGAGTTTTGGGACCTCTACCAGAGCATATGGTTCAAAGATCTAAGGGTACGGAAAAATATTTCAAGCGTGGATCACGACTAAGATGGCCCGAAGGAGCTGTTTCAAGGGAGAGCATAAATGCAGTGAAGAAGCTTGGTGATCTTAAGGATATTATATCACGTCATGTTGAGTCGTCAAGGTCCTCATTAACTGATTTGTTGTATGGCTTATTAACATATGAACCATCCTATCGCATTACTGCTCGCCAAGCTCTTGATCATCCCTTCTTTAGGATTCCAACTTAA
Protein sequence

>Msa0477450

MVSNFMERERTRKRPRLAWDAAAAPPPSIPKVPRNLAVVGDGGIERKYASPPRRDDDRDGHYVFNLGENLTPRSKWVKVSGQVLSEYKFKFLFDSACVIQHVASAVGTFGRVLECWDRQTRDYVAIKVIRSIKKYRDAAMIEVDVLERLVKSDVGCSRCVQILNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVACLWIILDLKHMHELRLIHTDLKPENILLVSSDYVKLPSCKRVMSDETQFRCLPKSSAIKLIDFGSTAFANQIHSSIVSTRHYRAPEVILGLGWSSPCDLWSVGCILIELCTGGALFQTHENLEHLAMMERVLGPLPEHMVQRSKGTEKYFKRGSRLRWPEGAVSRESINAVKKLGDLKDIISRHVESSRSSLTDLLYGLLTYEPSYRITARQALDHPFFRIPT*