AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0383510

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0383510 MtrunA17_Chr3g0139371 89.885 435 11 2 1 435 1 402 0.0 784
Msa0383510 MtrunA17_Chr4g0058241 56.236 441 140 8 10 431 17 423 3.26e-165 471
Msa0383510 MtrunA17_Chr3g0116701 56.081 444 143 9 4 431 12 419 1.90e-162 464
Msa0383510 MtrunA17_Chr3g0123491 55.629 453 142 7 2 431 4 420 2.68e-162 464
Msa0383510 MtrunA17_Chr8g0369241 32.044 362 179 10 107 430 148 480 2.94e-44 165
Msa0383510 MtrunA17_Chr6g0480541 32.938 337 191 8 101 434 899 1203 2.58e-41 157
Msa0383510 MtrunA17_Chr5g0407121 30.829 386 188 11 107 431 47 414 3.47e-41 152
Msa0383510 MtrunA17_Chr5g0437131 30.267 337 192 6 98 429 405 703 2.81e-39 150
Msa0383510 MtrunA17_Chr1g0210061 29.716 387 208 10 56 431 592 925 2.92e-39 150
Msa0383510 MtrunA17_Chr8g0370321 29.581 382 194 11 107 431 47 410 1.09e-38 145
Msa0383510 MtrunA17_Chr4g0027671 32.184 174 91 3 271 431 319 478 6.50e-23 101
Msa0383510 MtrunA17_Chr4g0027671 33.333 156 89 4 93 242 34 180 3.12e-20 93.2
Msa0383510 MtrunA17_Chr4g0051261 27.545 334 176 11 107 432 13 288 1.26e-22 97.4
Msa0383510 MtrunA17_Chr1g0179611 36.364 143 76 4 107 243 53 186 4.10e-22 99.0
Msa0383510 MtrunA17_Chr1g0179611 33.333 174 89 3 271 431 319 478 1.45e-20 94.0
Msa0383510 MtrunA17_Chr2g0320631 33.333 174 89 4 271 431 318 477 1.06e-21 97.4
Msa0383510 MtrunA17_Chr2g0320631 33.974 156 88 4 93 242 35 181 4.67e-21 95.5
Msa0383510 MtrunA17_Chr8g0339221 27.811 338 173 13 107 435 13 288 2.62e-21 95.9
Msa0383510 MtrunA17_Chr4g0057791 28.402 338 178 11 107 432 227 512 5.03e-21 95.5
Msa0383510 MtrunA17_Chr6g0480481 31.140 228 93 6 101 326 35 200 8.18e-21 90.1
Msa0383510 MtrunA17_Chr3g0141871 26.048 334 183 10 107 431 41 319 7.89e-20 90.5
Msa0383510 MtrunA17_Chr2g0293491 27.327 333 178 12 107 432 13 288 1.07e-19 89.0
Msa0383510 MtrunA17_Chr8g0369451 27.844 334 171 13 107 432 13 284 3.59e-19 89.4
Msa0383510 MtrunA17_Chr4g0038501 30.804 224 110 6 107 323 29 214 7.39e-19 89.7
Msa0383510 MtrunA17_Chr4g0002001 27.874 348 171 12 107 431 13 303 7.59e-19 87.0
Msa0383510 MtrunA17_Chr1g0187371 26.488 336 182 12 107 431 27 308 1.56e-18 85.9
Msa0383510 MtrunA17_Chr8g0348481 26.426 333 182 11 107 431 46 323 2.41e-18 86.3
Msa0383510 MtrunA17_Chr4g0065851 27.219 338 178 14 107 431 34 316 2.51e-18 87.4
Msa0383510 MtrunA17_Chr6g0478601 31.801 261 141 11 107 349 120 361 3.29e-18 87.0
Msa0383510 MtrunA17_Chr4g0038091 30.357 224 111 6 107 323 29 214 4.04e-18 87.4
Msa0383510 MtrunA17_Chr4g0030231 27.715 267 133 9 170 431 115 326 9.08e-18 84.7
Msa0383510 MtrunA17_Chr3g0130781 24.719 356 187 14 107 433 27 330 1.12e-17 85.1
Msa0383510 MtrunA17_Chr4g0045841 24.107 336 185 12 107 431 64 340 7.45e-17 82.0
Msa0383510 MtrunA17_Chr4g0030151 25.225 333 186 12 107 431 48 325 8.57e-17 81.6
Msa0383510 MtrunA17_Chr8g0358921 26.036 338 179 12 107 431 56 335 1.17e-16 80.9
Msa0383510 MtrunA17_Chr2g0287271 27.139 339 179 14 107 432 34 317 1.44e-16 82.0
Msa0383510 MtrunA17_Chr2g0284091 26.126 333 185 10 105 431 47 324 1.65e-16 80.9
Msa0383510 MtrunA17_Chr4g0018201 32.751 229 130 9 107 324 768 983 2.89e-16 81.6
Msa0383510 MtrunA17_Chr5g0428981 32.314 229 131 9 107 324 772 987 4.01e-16 81.3
Msa0383510 MtrunA17_Chr2g0277011 24.490 343 191 12 98 431 91 374 4.58e-16 79.7
Msa0383510 MtrunA17_Chr7g0248461 25.526 333 185 12 107 431 47 324 5.55e-16 79.3
Msa0383510 MtrunA17_Chr8g0392811 25.595 336 186 11 107 431 126 408 9.29e-16 79.7
Msa0383510 MtrunA17_Chr1g0205931 26.515 264 145 9 107 356 64 292 9.34e-16 79.7
Msa0383510 MtrunA17_Chr8g0350311 25.369 339 180 15 105 431 146 423 1.04e-15 79.0
Msa0383510 MtrunA17_Chr6g0483151 24.412 340 180 12 107 434 23 297 1.07e-15 78.6
Msa0383510 MtrunA17_Chr1g0170551 27.046 281 142 11 107 371 16 249 1.11e-15 79.7
Msa0383510 MtrunA17_Chr8g0378831 25.074 339 180 11 107 431 41 319 1.59e-15 77.8
Msa0383510 MtrunA17_Chr8g0377071 27.027 333 187 10 107 432 394 677 3.12e-15 78.2
Msa0383510 MtrunA17_Chr8g0359091 28.319 339 175 14 107 432 35 318 4.30e-15 77.4
Msa0383510 MtrunA17_Chr3g0122781 26.957 345 187 12 107 432 425 723 4.47e-15 77.8
Msa0383510 MtrunA17_Chr2g0320011 24.551 334 189 11 105 431 95 372 4.92e-15 76.6
Msa0383510 MtrunA17_Chr5g0443351 25.595 336 186 11 107 431 31 313 5.17e-15 77.0
Msa0383510 MtrunA17_Chr3g0102571 25.385 260 146 7 173 431 154 366 6.40e-15 76.3
Msa0383510 MtrunA17_Chr3g0096631 25.816 337 186 11 107 432 34 317 7.05e-15 76.6
Msa0383510 MtrunA17_Chr3g0099951 23.054 334 188 10 107 431 23 296 4.63e-14 73.6
Msa0383510 MtrunA17_Chr7g0272841 25.758 264 147 8 107 356 77 305 5.96e-14 73.9
Msa0383510 MtrunA17_Chr3g0093391 24.419 344 188 11 107 431 32 322 7.63e-14 73.6
Msa0383510 MtrunA17_Chr6g0482681 24.932 365 207 14 78 431 72 380 7.75e-14 73.6
Msa0383510 MtrunA17_Chr3g0093571 24.709 344 187 11 107 431 34 324 8.66e-14 73.2
Msa0383510 MtrunA17_Chr7g0246591 23.615 343 198 11 98 431 138 425 1.76e-13 72.0
Msa0383510 MtrunA17_Chr2g0314321 26.331 357 176 13 107 432 34 334 1.78e-13 72.4
Msa0383510 MtrunA17_Chr7g0245031 27.876 226 122 7 107 328 157 345 2.37e-13 71.6
Msa0383510 MtrunA17_Chr1g0190131 26.061 330 154 10 107 430 18 263 2.43e-13 70.1
Msa0383510 MtrunA17_Chr1g0167351 25.498 251 147 6 107 332 119 354 1.14e-12 69.7
Msa0383510 MtrunA17_Chr8g0345801 26.471 238 126 7 107 335 24 221 1.16e-12 67.8
Msa0383510 MtrunA17_Chr1g0176421 25.749 334 159 13 107 433 170 421 1.28e-12 69.7
Msa0383510 MtrunA17_Chr4g0061141 24.638 345 173 12 107 432 114 390 2.68e-12 68.9
Msa0383510 MtrunA17_Chr4g0059751 27.626 257 128 11 107 346 98 313 2.83e-12 68.2
Msa0383510 MtrunA17_Chr1g0167311 25.896 251 146 7 107 332 124 359 3.22e-12 68.2
Msa0383510 MtrunA17_Chr1g0201571 26.829 287 148 13 75 345 104 344 3.72e-12 68.2
Msa0383510 MtrunA17_Chr1g0203881 25.846 325 160 10 107 428 50 296 4.84e-12 67.8
Msa0383510 MtrunA17_Chr2g0286421 25.872 344 168 12 107 431 111 386 5.07e-12 67.8
Msa0383510 MtrunA17_Chr4g0030241 30.612 147 73 5 220 361 15 137 7.45e-12 63.9
Msa0383510 MtrunA17_Chr7g0258051 24.806 258 148 8 98 348 18 236 9.31e-12 67.0
Msa0383510 MtrunA17_Chr6g0453711 25.000 336 181 13 107 431 119 394 1.02e-11 67.0
Msa0383510 MtrunA17_Chr5g0396361 25.373 335 181 13 107 431 149 424 2.46e-11 65.9
Msa0383510 MtrunA17_Chr4g0066691 25.291 344 170 12 107 431 113 388 5.88e-11 64.3
Msa0383510 MtrunA17_Chr7g0218071 25.000 344 172 11 107 431 129 405 6.10e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0383510 AT4G32660.1 65.888 428 106 4 6 432 9 397 0.0 567
Msa0383510 AT4G32660.3 65.888 428 106 4 6 432 1 389 0.0 567
Msa0383510 AT4G32660.2 66.321 386 90 4 6 390 9 355 1.61e-179 505
Msa0383510 AT3G53570.1 58.520 446 128 8 9 431 32 443 6.15e-175 498
Msa0383510 AT3G53570.4 58.520 446 128 8 9 431 32 443 6.15e-175 498
Msa0383510 AT3G53570.2 58.520 446 128 8 9 431 32 443 6.15e-175 498
Msa0383510 AT3G53570.3 58.520 446 128 8 9 431 18 429 1.02e-174 497
Msa0383510 AT3G53570.5 58.520 446 128 8 9 431 18 429 1.02e-174 497
Msa0383510 AT4G24740.1 53.691 447 142 8 10 431 17 423 2.96e-160 459
Msa0383510 AT4G24740.7 58.312 391 126 6 43 431 30 385 4.08e-160 457
Msa0383510 AT4G32660.4 73.129 294 69 2 140 432 1 285 1.89e-157 446
Msa0383510 AT4G24740.6 63.720 328 105 5 107 431 4 320 7.89e-150 429
Msa0383510 AT4G24740.9 63.720 328 105 5 107 431 4 320 7.89e-150 429
Msa0383510 AT4G24740.2 63.720 328 105 5 107 431 4 320 7.89e-150 429
Msa0383510 AT4G24740.3 54.201 369 106 6 10 354 17 346 2.34e-132 385
Msa0383510 AT4G24740.5 67.600 250 69 3 107 354 4 243 1.91e-121 353
Msa0383510 AT4G24740.4 52.047 342 100 7 6 323 14 315 1.27e-111 331
Msa0383510 AT4G24740.10 64.623 212 70 4 223 431 8 217 1.28e-92 279
Msa0383510 AT4G24740.8 64.623 212 70 4 223 431 8 217 1.28e-92 279
Msa0383510 AT5G35980.2 31.405 363 180 11 107 430 131 463 9.51e-43 160
Msa0383510 AT5G35980.3 31.405 363 180 11 107 430 96 428 2.60e-42 160
Msa0383510 AT5G35980.1 31.405 363 180 11 107 430 131 463 3.06e-42 160
Msa0383510 AT3G53640.1 30.357 392 200 11 56 431 305 639 5.38e-41 154
Msa0383510 AT1G13350.3 30.435 391 199 12 56 430 497 830 8.51e-40 152
Msa0383510 AT1G73460.2 32.344 337 193 8 101 434 859 1163 8.64e-40 152
Msa0383510 AT1G73460.1 32.344 337 193 8 101 434 859 1163 8.64e-40 152
Msa0383510 AT1G73450.1 32.344 337 193 8 101 434 842 1146 8.91e-40 152
Msa0383510 AT1G13350.1 30.357 392 200 12 56 431 424 758 1.01e-39 152
Msa0383510 AT1G13350.2 30.357 392 200 12 56 431 451 785 1.27e-39 152
Msa0383510 AT3G25840.2 29.847 392 201 11 56 431 337 670 2.31e-39 150
Msa0383510 AT3G17750.1 32.249 338 194 8 98 434 829 1132 6.36e-39 150
Msa0383510 AT3G25840.1 29.847 392 201 11 56 431 599 932 2.91e-38 148
Msa0383510 AT4G35500.1 28.463 397 193 12 107 435 47 420 3.29e-38 144
Msa0383510 AT2G40120.1 30.861 337 190 8 98 429 263 561 1.11e-37 144
Msa0383510 AT4G35500.2 25.990 404 195 13 107 435 47 421 1.85e-28 117
Msa0383510 AT3G44850.1 38.462 143 73 4 107 243 54 187 7.90e-23 101
Msa0383510 AT3G44850.1 35.057 174 86 5 271 431 322 481 1.39e-22 100
Msa0383510 AT2G38620.2 28.406 345 173 15 107 431 13 303 7.93e-22 95.9
Msa0383510 AT3G53030.1 36.364 143 76 4 107 243 51 184 9.86e-22 98.2
Msa0383510 AT3G53030.1 33.714 175 89 3 271 432 307 467 3.77e-21 96.3
Msa0383510 AT5G22840.1 34.483 174 87 5 271 431 311 470 4.88e-21 95.9
Msa0383510 AT5G22840.1 36.364 143 76 4 107 243 54 187 1.59e-20 94.4
Msa0383510 AT1G76540.1 25.294 340 181 12 107 431 23 304 1.55e-20 92.0
Msa0383510 AT3G48750.1 25.152 330 189 9 107 432 13 288 7.19e-20 90.1
Msa0383510 AT3G54180.1 27.697 343 176 13 107 431 13 301 1.17e-19 89.7
Msa0383510 AT3G13530.1 30.804 224 110 6 107 323 29 214 1.30e-19 92.4
Msa0383510 AT2G17530.1 32.022 178 94 4 271 435 256 419 1.52e-19 90.9
Msa0383510 AT2G17530.1 34.965 143 78 4 107 243 47 180 1.16e-16 82.0
Msa0383510 AT2G17530.3 32.022 178 94 4 271 435 256 419 1.52e-19 90.9
Msa0383510 AT2G17530.3 34.965 143 78 4 107 243 47 180 1.16e-16 82.0
Msa0383510 AT4G13020.7 25.970 335 182 10 107 435 13 287 3.83e-19 89.0
Msa0383510 AT4G19110.2 27.300 337 169 13 107 432 13 284 3.89e-19 89.7
Msa0383510 AT4G19110.1 27.300 337 169 13 107 432 13 284 4.65e-19 89.7
Msa0383510 AT4G13020.6 25.970 335 182 10 107 435 13 287 4.83e-19 89.0
Msa0383510 AT4G13020.4 25.970 335 182 10 107 435 13 287 4.92e-19 89.0
Msa0383510 AT4G13020.1 25.970 335 182 10 107 435 13 287 5.13e-19 89.4
Msa0383510 AT4G11330.1 26.506 332 183 13 107 431 52 329 6.47e-19 88.6
Msa0383510 AT4G13020.2 25.970 335 182 10 107 435 21 295 6.64e-19 89.0
Msa0383510 AT4G13020.3 25.970 335 182 10 107 435 21 295 6.68e-19 89.0
Msa0383510 AT3G17850.1 31.950 241 137 8 107 336 891 1115 7.85e-19 90.1
Msa0383510 AT3G07980.1 31.250 224 109 7 107 323 29 214 9.71e-19 89.7
Msa0383510 AT3G07980.2 31.250 224 109 7 107 323 29 214 1.16e-18 89.4
Msa0383510 AT2G38620.4 30.579 242 111 9 194 431 53 241 1.43e-18 85.1
Msa0383510 AT1G20930.1 26.239 343 174 12 107 431 25 306 1.60e-18 86.3
Msa0383510 AT1G10210.2 25.826 333 185 12 107 431 41 319 2.10e-18 86.7
Msa0383510 AT1G10210.3 25.826 333 185 12 107 431 41 319 2.10e-18 86.7
Msa0383510 AT1G10210.1 25.826 333 185 12 107 431 41 319 2.10e-18 86.7
Msa0383510 AT5G63370.2 25.893 336 190 10 107 431 172 459 2.41e-18 87.4
Msa0383510 AT5G63370.3 25.893 336 190 10 107 431 172 459 2.41e-18 87.4
Msa0383510 AT1G01560.2 26.471 340 173 13 107 431 49 326 2.63e-18 86.7
Msa0383510 AT1G59580.2 26.506 332 184 11 107 431 41 319 3.02e-18 86.3
Msa0383510 AT1G59580.1 26.506 332 184 11 107 431 41 319 3.02e-18 86.3
Msa0383510 AT4G13020.8 26.254 339 185 11 107 435 13 296 3.75e-18 86.3
Msa0383510 AT4G13020.5 26.254 339 185 11 107 435 13 296 4.15e-18 86.7
Msa0383510 AT5G63370.7 26.190 336 189 11 107 431 306 593 4.83e-18 87.0
Msa0383510 AT5G63370.8 26.190 336 189 11 107 431 306 593 4.83e-18 87.0
Msa0383510 AT5G63370.4 26.190 336 189 11 107 431 306 593 4.83e-18 87.0
Msa0383510 AT5G63370.6 26.190 336 189 11 107 431 306 593 4.83e-18 87.0
Msa0383510 AT5G63370.1 26.190 336 189 11 107 431 306 593 4.83e-18 87.0
Msa0383510 AT4G01370.1 26.126 333 183 12 107 431 52 329 5.68e-18 85.5
Msa0383510 AT5G45430.1 26.706 337 171 13 107 432 13 284 2.40e-17 84.7
Msa0383510 AT5G45430.2 26.706 337 171 13 107 432 13 284 2.68e-17 84.3
Msa0383510 AT2G17530.2 34.965 143 78 4 107 243 47 180 3.91e-17 82.8
Msa0383510 AT2G17530.2 41.667 84 43 1 271 348 256 339 2.97e-13 71.2
Msa0383510 AT1G57870.3 25.656 343 187 12 98 431 83 366 8.69e-17 82.4
Msa0383510 AT1G57870.1 24.581 358 172 11 98 431 83 366 9.57e-17 82.4
Msa0383510 AT1G57870.4 24.581 358 172 11 98 431 83 366 9.57e-17 82.4
Msa0383510 AT1G57870.2 24.581 358 172 11 98 431 83 366 9.57e-17 82.4
Msa0383510 AT5G63610.1 30.252 238 115 9 212 433 133 335 1.76e-16 81.6
Msa0383510 AT5G19010.1 27.697 343 172 15 107 432 34 317 3.21e-16 81.3
Msa0383510 AT3G14720.1 27.628 333 185 12 107 432 34 317 7.04e-16 80.5
Msa0383510 AT1G01560.3 25.749 334 167 14 107 423 49 318 9.89e-16 78.6
Msa0383510 AT1G67580.1 25.150 334 192 9 107 432 415 698 1.02e-15 80.1
Msa0383510 AT1G67580.2 25.150 334 192 9 107 432 415 698 1.02e-15 80.1
Msa0383510 AT4G36450.1 25.076 331 187 10 107 431 41 316 1.09e-15 78.6
Msa0383510 AT1G09840.3 24.302 358 173 11 98 431 84 367 1.28e-15 79.0
Msa0383510 AT1G09840.7 24.302 358 173 11 98 431 84 367 1.28e-15 79.0
Msa0383510 AT1G09840.10 24.302 358 173 11 98 431 84 367 1.28e-15 79.0
Msa0383510 AT1G09840.6 24.302 358 173 11 98 431 84 367 1.28e-15 79.0
Msa0383510 AT1G09840.4 24.302 358 173 11 98 431 84 367 1.28e-15 79.0
Msa0383510 AT1G09840.1 24.302 358 173 11 98 431 84 367 1.28e-15 79.0
Msa0383510 AT1G09840.9 24.302 358 173 11 98 431 84 367 1.28e-15 79.0
Msa0383510 AT1G09840.5 24.302 358 173 11 98 431 84 367 1.28e-15 79.0
Msa0383510 AT1G09840.8 24.302 358 173 11 98 431 84 367 1.28e-15 79.0
Msa0383510 AT1G09840.2 24.302 358 173 11 98 431 84 367 1.28e-15 79.0
Msa0383510 AT2G18170.1 25.000 332 189 10 107 431 41 319 1.47e-15 78.2
Msa0383510 AT1G73670.1 25.661 378 204 13 69 431 66 381 1.92e-15 79.0
Msa0383510 AT3G45640.1 24.107 336 186 11 107 431 47 324 2.04e-15 77.8
Msa0383510 AT1G07880.2 24.925 333 187 11 107 431 42 319 2.31e-15 77.8
Msa0383510 AT3G14720.2 27.628 333 185 12 107 432 34 317 2.89e-15 77.8
Msa0383510 AT3G14720.3 27.628 333 185 12 107 432 34 317 2.89e-15 77.8
Msa0383510 AT1G48490.4 28.788 264 156 8 107 356 838 1083 3.36e-15 78.6
Msa0383510 AT1G48490.3 28.788 264 156 8 107 356 837 1082 3.41e-15 78.6
Msa0383510 AT1G48490.2 28.788 264 156 8 107 356 837 1082 3.41e-15 78.6
Msa0383510 AT1G48490.1 28.788 264 156 8 107 356 837 1082 3.41e-15 78.6
Msa0383510 AT4G18710.1 25.075 335 186 11 105 431 47 324 4.45e-15 77.0
Msa0383510 AT2G43790.1 23.442 337 188 12 107 432 72 349 4.86e-15 77.0
Msa0383510 AT4G19110.3 29.075 227 106 8 213 432 50 228 6.18e-15 76.6
Msa0383510 AT2G30980.1 24.279 416 235 16 26 431 11 356 8.99e-15 76.3
Msa0383510 AT1G50240.3 26.429 280 145 11 107 371 15 248 1.24e-14 77.0
Msa0383510 AT1G50240.2 26.429 280 145 11 107 371 15 248 1.24e-14 77.0
Msa0383510 AT3G18040.1 27.273 308 173 10 75 371 5 272 1.30e-14 76.3
Msa0383510 AT3G18040.4 27.273 308 173 10 75 371 114 381 1.40e-14 76.3
Msa0383510 AT3G18040.3 27.273 308 173 10 75 371 114 381 2.53e-14 75.5
Msa0383510 AT3G18040.5 27.124 306 172 10 77 371 2 267 2.55e-14 75.1
Msa0383510 AT2G42880.1 26.686 341 178 12 107 432 34 317 3.79e-14 75.1
Msa0383510 AT1G73690.1 25.000 336 177 14 107 431 20 291 3.91e-14 74.3
Msa0383510 AT2G42880.2 26.686 341 178 12 107 432 34 317 4.31e-14 74.3
Msa0383510 AT5G63370.5 27.888 251 132 10 107 345 306 519 5.06e-14 74.3
Msa0383510 AT5G63370.10 27.888 251 132 10 107 345 306 519 5.06e-14 74.3
Msa0383510 AT1G06390.2 24.478 335 188 12 105 431 77 354 6.48e-14 73.6
Msa0383510 AT1G06390.1 24.478 335 188 12 105 431 77 354 6.48e-14 73.6
Msa0383510 AT1G09000.1 27.391 230 122 7 107 326 78 272 6.84e-14 74.3
Msa0383510 AT5G63370.9 26.800 250 136 8 107 345 172 385 8.48e-14 73.2
Msa0383510 AT1G09000.2 27.391 230 122 7 107 326 78 272 8.96e-14 73.9
Msa0383510 AT1G01560.4 28.226 248 127 10 107 343 49 256 1.15e-13 71.6
Msa0383510 AT1G01560.1 28.226 248 127 10 107 343 49 256 1.15e-13 71.6
Msa0383510 AT1G53510.1 25.519 337 187 11 107 432 34 317 1.33e-13 73.2
Msa0383510 AT2G01450.3 25.220 341 198 12 99 432 18 308 1.85e-13 72.4
Msa0383510 AT2G01450.1 25.220 341 198 12 99 432 18 308 1.85e-13 72.4
Msa0383510 AT2G01450.2 25.220 341 198 12 99 432 18 308 1.85e-13 72.4
Msa0383510 AT2G01450.4 25.220 341 198 12 99 432 18 308 1.85e-13 72.4
Msa0383510 AT3G08730.1 27.632 228 120 8 107 328 143 331 2.32e-13 72.0
Msa0383510 AT3G08730.2 27.632 228 120 8 107 328 143 331 2.32e-13 72.0
Msa0383510 AT1G18150.3 27.609 297 164 11 69 354 80 336 2.35e-13 72.4
Msa0383510 AT1G18150.2 27.609 297 164 11 69 354 80 336 2.35e-13 72.4
Msa0383510 AT1G18150.1 27.609 297 164 11 69 354 80 336 2.35e-13 72.4
Msa0383510 AT3G08720.1 27.876 226 122 7 107 328 149 337 3.22e-13 71.6
Msa0383510 AT3G08720.3 27.876 226 122 7 107 328 149 337 3.22e-13 71.6
Msa0383510 AT3G08720.4 27.876 226 122 7 107 328 149 337 3.22e-13 71.6
Msa0383510 AT3G08720.2 27.876 226 122 7 107 328 149 337 3.22e-13 71.6
Msa0383510 AT1G08650.1 24.085 328 170 8 107 432 24 274 3.33e-13 70.1
Msa0383510 AT2G38620.3 28.295 258 132 12 107 344 13 237 6.37e-13 68.9
Msa0383510 AT2G38620.1 28.295 258 132 12 107 344 13 237 6.37e-13 68.9
Msa0383510 AT4G18710.2 24.803 254 149 8 105 351 41 259 6.81e-13 69.3
Msa0383510 AT3G04530.1 24.576 236 134 8 107 334 20 219 1.22e-12 68.6
Msa0383510 AT1G54960.1 25.150 334 159 10 107 430 77 329 1.36e-12 70.1
Msa0383510 AT1G54960.2 25.150 334 159 10 107 430 77 329 1.36e-12 70.1
Msa0383510 AT1G08650.2 25.909 220 129 4 107 324 24 211 1.94e-12 67.8
Msa0383510 AT4G04700.1 25.877 228 131 6 107 328 37 232 2.40e-12 68.9
Msa0383510 AT1G09840.11 27.064 218 108 7 220 431 68 240 3.44e-12 67.4
Msa0383510 AT4G10010.2 26.377 345 169 14 107 433 165 442 7.43e-12 67.8
Msa0383510 AT5G04510.2 24.783 230 141 8 105 329 51 253 8.66e-12 67.0
Msa0383510 AT5G04510.1 24.783 230 141 8 105 329 51 253 9.23e-12 67.4
Msa0383510 AT5G04510.3 24.348 230 142 8 105 329 51 253 1.30e-11 65.9
Msa0383510 AT5G64960.1 25.648 347 180 13 107 431 35 325 1.68e-11 66.6
Msa0383510 AT3G18040.2 28.846 208 105 7 172 371 12 184 2.18e-11 65.9
Msa0383510 AT5G23580.1 24.523 367 177 15 72 430 5 279 2.74e-11 65.9
Msa0383510 AT5G44290.2 25.446 224 116 7 216 433 245 423 4.50e-11 65.5
Msa0383510 AT5G44290.5 25.446 224 116 7 216 433 245 423 4.50e-11 65.5
Msa0383510 AT5G44290.4 25.446 224 116 7 216 433 245 423 4.50e-11 65.5
Msa0383510 AT5G44290.1 25.446 224 116 7 216 433 245 423 4.50e-11 65.5
Msa0383510 AT5G44290.3 25.446 224 116 7 216 433 245 423 4.50e-11 65.5
Msa0383510 AT5G44290.6 25.561 223 115 7 216 432 245 422 4.54e-11 65.5
Msa0383510 AT5G50860.2 24.709 344 172 12 107 431 123 398 5.76e-11 64.7
Msa0383510 AT5G44290.7 25.561 223 115 7 216 432 245 422 5.82e-11 64.7
Msa0383510 AT1G18670.2 25.797 345 170 13 107 431 140 418 7.61e-11 64.7
Msa0383510 AT5G50860.1 24.709 344 172 12 107 431 123 398 7.66e-11 64.7

Find 131 sgRNAs with CRISPR-Local

Find 328 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAGATACCATTTACATTAA+TGG 0.152187 3_1:+86428457 None:intergenic
GTGGATCTTGTTCGTGAATT+TGG 0.181033 3_1:-86426401 Msa0383510:CDS
AATTCAACCATTAATGTAAA+TGG 0.188155 3_1:-86428464 Msa0383510:exon
ACTCTATTGAACATAATTAT+TGG 0.190340 3_1:-86423883 Msa0383510:three_prime_UTR
GTTTCAGACTCATGAAAATT+TGG 0.209964 3_1:-86424782 Msa0383510:CDS
GCGATTAAGCTGATTGATTT+TGG 0.243544 3_1:-86425952 Msa0383510:CDS
ACCAACCACTGCCAAATTTC+TGG 0.248937 3_1:+86428282 None:intergenic
TGAATTTGGACGACAGCTTT+TGG 0.258689 3_1:-86426387 Msa0383510:CDS
AGATAAAATTCTCAGCAAAA+TGG 0.261730 3_1:-86427324 Msa0383510:intron
AGAATAAACCGTTGGGAGTT+AGG 0.277518 3_1:+86428605 None:intergenic
TGTCAGATGAAACACAATTT+AGG 0.278233 3_1:-86425993 Msa0383510:CDS
GGCAATGATGGAGAGAGTTT+TGG 0.280611 3_1:-86424752 Msa0383510:CDS
TCACGATCGTCGTCTCTTCT+TGG 0.281498 3_1:+86428226 None:intergenic
CTCCCTTGAAACAGCTCCTT+CGG 0.283662 3_1:+86424468 None:intergenic
AGGCACCTTCGGTCGAGTTT+TGG 0.286156 3_1:-86427212 Msa0383510:CDS
TCCTGAATTGGTTCGATTAC+CGG 0.290840 3_1:-86426926 Msa0383510:CDS
CTCTTGATCATCCCTTCTTT+AGG 0.304316 3_1:-86424196 Msa0383510:CDS
TCCGGTAATCGAACCAATTC+AGG 0.307110 3_1:+86426925 None:intergenic
TCATTAACTGATTTGTTGTA+TGG 0.314065 3_1:-86424263 Msa0383510:CDS
AGAGCCCCTGAGGTTATCTT+AGG 0.322517 3_1:-86425874 Msa0383510:intron
GCTTCAGGTCGGTGTGGATT+AGG 0.330715 3_1:+86426162 None:intergenic
TAACTCCCAACGGTTTATTC+TGG 0.343918 3_1:-86428603 Msa0383510:five_prime_UTR
GAAGAAGCTTGGTGATCTTA+AGG 0.349004 3_1:-86424431 Msa0383510:intron
CGCCGAGATTAAAGACATAA+TGG 0.351983 3_1:+86428200 None:intergenic
CTCTGGTAAGCAAGGCCTAC+TGG 0.358152 3_1:-86423736 Msa0383510:three_prime_UTR
GGGACCTCTACCAGAGCATA+TGG 0.387839 3_1:-86424731 Msa0383510:CDS
GTAAATGGTATCTAATTTCA+TGG 0.390979 3_1:-86428449 Msa0383510:exon
TTACATACCTTTGGAATTGA+AGG 0.396668 3_1:+86428367 None:intergenic
TTACAATGCATATGTGATTC+CGG 0.403247 3_1:+86426907 None:intergenic
GAATAAACCGTTGGGAGTTA+GGG 0.422514 3_1:+86428606 None:intergenic
AATGCCTTGTGTTATTTGAA+TGG 0.424169 3_1:-86424154 Msa0383510:three_prime_UTR
TTTGGAGCACCTGGCAATGA+TGG 0.425144 3_1:-86424764 Msa0383510:CDS
TCCCTTGAAACAGCTCCTTC+GGG 0.428173 3_1:+86424469 None:intergenic
GCTAGTGCTGTAGGCACCTT+CGG 0.428753 3_1:-86427223 Msa0383510:CDS
CCAACCACTGCCAAATTTCT+GGG 0.430843 3_1:+86428283 None:intergenic
CACAATATCTCGCAGGGGTA+CGG 0.431103 3_1:-86424527 Msa0383510:intron
TGAACATAATTATTGGATAG+AGG 0.434262 3_1:-86423876 Msa0383510:three_prime_UTR
TTAAGTTGGAATCCTAAAGA+AGG 0.444665 3_1:+86424184 None:intergenic
GGAATCCCGTATCTTGTCTC+TGG 0.448674 3_1:-86428554 Msa0383510:five_prime_UTR
GGTATCTAATTTCATGGAAA+GGG 0.451585 3_1:-86428443 Msa0383510:CDS
GATAAAATTCTCAGCAAAAT+GGG 0.454575 3_1:-86427323 Msa0383510:intron
GGAAACGACCTCGTCTCGCT+TGG 0.458789 3_1:-86428411 Msa0383510:CDS
GAAACGACCTCGTCTCGCTT+GGG 0.459412 3_1:-86428410 Msa0383510:CDS
TATCAGGTCTTTGAGAAGCT+TGG 0.464813 3_1:-86426473 Msa0383510:intron
CTTGATCGCTACATAATCTC+TGG 0.464927 3_1:+86427171 None:intergenic
TCGTTACCTAAGATAACCTC+AGG 0.467009 3_1:+86425868 None:intergenic
GGTCATCTCCATGTGATTTG+TGG 0.473282 3_1:-86424934 Msa0383510:CDS
TTGGCGAGCAGTAATGCGTT+TGG 0.487197 3_1:+86424220 None:intergenic
ACTGGGACATCAATATTTGA+AGG 0.489134 3_1:-86423718 Msa0383510:three_prime_UTR
GGCCCGAAGGAGCTGTTTCA+AGG 0.489761 3_1:-86424471 Msa0383510:CDS
TGTAAAGCTTCCTAGTTGTA+AGG 0.498491 3_1:-86426108 Msa0383510:intron
CGAACAAGATCCACAGGGAA+TGG 0.498629 3_1:+86426410 None:intergenic
GGCCATTATGTCTTTAATCT+CGG 0.499456 3_1:-86428202 Msa0383510:CDS
CAGAGATTATGTAGCGATCA+AGG 0.502779 3_1:-86427170 Msa0383510:CDS
TTTAGAAAATCAAATAAACT+TGG 0.502789 3_1:+86426449 None:intergenic
ACCTTTGGAATTGAAGGAGG+TGG 0.504072 3_1:+86428373 None:intergenic
GATCTTTGAACCATATGCTC+TGG 0.504088 3_1:+86424721 None:intergenic
AATAATTATGTTCAATAGAG+TGG 0.504744 3_1:+86423885 None:intergenic
TGGTATCTAATTTCATGGAA+AGG 0.505049 3_1:-86428444 Msa0383510:CDS
CCATGTGATTTGTGGAGTGT+TGG 0.505435 3_1:-86424926 Msa0383510:CDS
CAGCATGTTGCTAGTGCTGT+AGG 0.508712 3_1:-86427232 Msa0383510:CDS
AAACTCTCTCCATCATTGCC+AGG 0.512831 3_1:+86424755 None:intergenic
CCCAGAAATTTGGCAGTGGT+TGG 0.517994 3_1:-86428283 Msa0383510:CDS
GGATTTATCATTTATTGCAG+TGG 0.518698 3_1:-86424096 Msa0383510:three_prime_UTR
CATTGCAATGCAAATACAGT+TGG 0.521160 3_1:+86423927 None:intergenic
CGATCGTCGTCTCTTCTTGG+AGG 0.522170 3_1:+86428229 None:intergenic
TCTGGTAAGCAAGGCCTACT+GGG 0.526357 3_1:-86423735 Msa0383510:three_prime_UTR
TCATGAAAATTTGGAGCACC+TGG 0.527435 3_1:-86424773 Msa0383510:CDS
GAACAAGATCCACAGGGAAT+GGG 0.532174 3_1:+86426411 None:intergenic
TAAGTTGGAATCCTAAAGAA+GGG 0.537826 3_1:+86424185 None:intergenic
TGGAATCTGTAGCATGTCTG+TGG 0.543898 3_1:-86426367 Msa0383510:CDS
AAAATGACATTCCAGGTCTA+GGG 0.544013 3_1:-86424958 Msa0383510:intron
AGAAGGGATGATCAAGAGCT+TGG 0.544574 3_1:+86424201 None:intergenic
GTACTCGAGAAGGCTTGAAA+AGG 0.545107 3_1:-86423844 Msa0383510:three_prime_UTR
TTGTAGAAACAATGGAGCTA+TGG 0.547337 3_1:+86425905 None:intergenic
TGTATTTGCATTGCAATGGA+TGG 0.547816 3_1:-86423922 Msa0383510:three_prime_UTR
CGAGCAGTAATGCGTTTGGA+TGG 0.548284 3_1:+86424224 None:intergenic
GCTGTGTACAGATCCTGAAT+TGG 0.549041 3_1:-86426938 Msa0383510:CDS
AGCTTAATCGCACTAGACTT+AGG 0.556964 3_1:+86425964 None:intergenic
GTAATTCCAGAGACAAGATA+CGG 0.557194 3_1:+86428548 None:intergenic
GCAAAATGGGTGAAGGTTAG+CGG 0.558808 3_1:-86427310 Msa0383510:CDS
ATACAACAAATCAGTTAATG+AGG 0.558835 3_1:+86424265 None:intergenic
CAACTGTATTTGCATTGCAA+TGG 0.562108 3_1:-86423926 Msa0383510:three_prime_UTR
TGAACCATATGCTCTGGTAG+AGG 0.562280 3_1:+86424727 None:intergenic
GAATTATGTTGTACTCGAGA+AGG 0.566792 3_1:-86423854 Msa0383510:three_prime_UTR
ATAATGCCTTGTAGAAACAA+TGG 0.567287 3_1:+86425897 None:intergenic
ATAAATGCAGTGAAGAAGCT+TGG 0.570066 3_1:-86424442 Msa0383510:CDS
CATACCTTTGGAATTGAAGG+AGG 0.570410 3_1:+86428370 None:intergenic
AATTCACGAACAAGATCCAC+AGG 0.570749 3_1:+86426404 None:intergenic
GAGAACCAGAATAAACCGTT+GGG 0.571649 3_1:+86428598 None:intergenic
ATAGCTCCATTGTTTCTACA+AGG 0.573657 3_1:-86425903 Msa0383510:CDS
TCATGGAAAGGGAACGAACT+CGG 0.583235 3_1:-86428432 Msa0383510:CDS
CATTCTCATTGAGTTATGCA+CGG 0.584438 3_1:-86424900 Msa0383510:intron
CACGTCATGTTGAGTCGTCA+AGG 0.590275 3_1:-86424289 Msa0383510:CDS
CTGTGTCGTCTGTGTAAGAA+CGG 0.591211 3_1:+86428576 None:intergenic
GGTACCCAGAAATTTGGCAG+TGG 0.594065 3_1:-86428287 Msa0383510:CDS
TCCACCTCCTTCAATTCCAA+AGG 0.594074 3_1:-86428374 Msa0383510:intron
GCCCGAAGGAGCTGTTTCAA+GGG 0.594720 3_1:-86424470 Msa0383510:CDS
TCAAATATTGATGTCCCAGT+AGG 0.595403 3_1:+86423721 None:intergenic
AGTTGTGGCGAATATGAAGA+TGG 0.597357 3_1:+86428520 None:intergenic
AGAGGGCACTCTGGTAAGCA+AGG 0.599176 3_1:-86423744 Msa0383510:three_prime_UTR
GGAGAACCAGAATAAACCGT+TGG 0.599407 3_1:+86428597 None:intergenic
ATATCATTCAGAGGGCACTC+TGG 0.602779 3_1:-86423753 Msa0383510:three_prime_UTR
ATTCTCAGCAAAATGGGTGA+AGG 0.606392 3_1:-86427317 Msa0383510:intron
AATTGAACCCTAACTCCCAA+CGG 0.606887 3_1:-86428613 Msa0383510:five_prime_UTR
ATACCAAGTACCTTACAACT+AGG 0.608609 3_1:+86426098 None:intergenic
TTGGCAGTGGTTGGTGACGG+TGG 0.610790 3_1:-86428274 Msa0383510:CDS
CCAACACTCCACAAATCACA+TGG 0.613754 3_1:+86424926 None:intergenic
TTTCTGGCTTCAGGTCGGTG+TGG 0.618594 3_1:+86426156 None:intergenic
GTATTTGCATTGCAATGGAT+GGG 0.622478 3_1:-86423921 Msa0383510:three_prime_UTR
AATTTGGCAGTGGTTGGTGA+CGG 0.628481 3_1:-86428277 Msa0383510:CDS
CGTCTTGTGAAGAGTGATGT+GGG 0.632369 3_1:-86427088 Msa0383510:CDS
CGTTACCTAAGATAACCTCA+GGG 0.633079 3_1:+86425869 None:intergenic
ACATGATGAATAAACGCTTG+AGG 0.635050 3_1:+86426333 None:intergenic
AGAAGAGACGACGATCGTGA+TGG 0.636898 3_1:-86428223 Msa0383510:CDS
TAATTCCAGAGACAAGATAC+GGG 0.637955 3_1:+86428549 None:intergenic
AGCGTGGATCACGACTAAGA+TGG 0.638785 3_1:-86424492 Msa0383510:CDS
ACATTCCAAAACTCGACCGA+AGG 0.639593 3_1:+86427207 None:intergenic
TTTGCATTGCAATGGATGGG+TGG 0.644054 3_1:-86423918 Msa0383510:three_prime_UTR
CGTTCTTACACAGACGACAC+AGG 0.644964 3_1:-86428575 Msa0383510:five_prime_UTR
GCTGCATCCCAAGCGAGACG+AGG 0.645412 3_1:+86428403 None:intergenic
ATGACATTCCAGGTCTAGGG+TGG 0.654171 3_1:-86424955 Msa0383510:intron
TCGCGATGCAGCAATGATCG+AGG 0.670546 3_1:-86427125 Msa0383510:CDS
TAAATACTGCCCATTCCCTG+TGG 0.681993 3_1:-86426420 Msa0383510:CDS
TCACGACTAAGATGGCCCGA+AGG 0.691921 3_1:-86424484 Msa0383510:CDS
ACGTCTTGTGAAGAGTGATG+TGG 0.700818 3_1:-86427089 Msa0383510:CDS
ATAACCATTCAAATAACACA+AGG 0.717871 3_1:+86424150 None:intergenic
AGAGTGATGTGGGATGCTCA+CGG 0.726542 3_1:-86427078 Msa0383510:intron
AAGGCATTATAGAGCCCCTG+AGG 0.743741 3_1:-86425884 Msa0383510:CDS
GTTACCTAAGATAACCTCAG+GGG 0.756792 3_1:+86425870 None:intergenic
ATTCACGAACAAGATCCACA+GGG 0.786775 3_1:+86426405 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTAAAATATTACTTTGT+TGG - chr3_1:86424547-86424566 Msa0383510:intron 10.0%
!!! TTTCTTTAGTTTAATAAAAT+AGG - chr3_1:86424866-86424885 Msa0383510:intron 10.0%
!!! TTCTTTAGTTTAATAAAATA+GGG - chr3_1:86424867-86424886 Msa0383510:intron 10.0%
!!! TTTTGTATTATTTTGAAAAT+GGG - chr3_1:86425588-86425607 Msa0383510:intron 10.0%
!! AGAAAAAGTTAAAAATAATT+GGG + chr3_1:86426781-86426800 None:intergenic 10.0%
!! AAGAAAAAGTTAAAAATAAT+TGG + chr3_1:86426782-86426801 None:intergenic 10.0%
!!! TAATATTTTAAATAGCACAT+AGG + chr3_1:86424541-86424560 None:intergenic 15.0%
!!! TCTTTAGTTTAATAAAATAG+GGG - chr3_1:86424868-86424887 Msa0383510:intron 15.0%
!!! GTTTTGTATTATTTTGAAAA+TGG - chr3_1:86425587-86425606 Msa0383510:intron 15.0%
!! TTTAGAAAATCAAATAAACT+TGG + chr3_1:86425895-86425914 None:intergenic 15.0%
!!! TGTTTTATTATTATATCTCT+TGG - chr3_1:86426028-86426047 Msa0383510:intron 15.0%
!! TTTAATGAAAATTACTTGAT+TGG - chr3_1:86426313-86426332 Msa0383510:intron 15.0%
!!! TTTTTTTTTTTTTTCGTGAA+AGG + chr3_1:86427130-86427149 None:intergenic 15.0%
!!! AAGTGATTTAATTAACTTTT+TGG + chr3_1:86427206-86427225 None:intergenic 15.0%
!! AATTATAATATTTAATCACC+TGG + chr3_1:86427748-86427767 None:intergenic 15.0%
!!! AAATTTTTATATCATTCAGA+GGG - chr3_1:86428580-86428599 Msa0383510:five_prime_UTR 15.0%
!! AATTCAACCATTAATGTAAA+TGG - chr3_1:86423877-86423896 Msa0383510:three_prime_UTR 20.0%
!! TTAGATACCATTTACATTAA+TGG + chr3_1:86423887-86423906 None:intergenic 20.0%
!! ACACATTAAATTGAGAAATA+GGG + chr3_1:86424250-86424269 None:intergenic 20.0%
!!! TTCATGGGTTTTATAAAATA+GGG + chr3_1:86424591-86424610 None:intergenic 20.0%
!!! TTTCATGGGTTTTATAAAAT+AGG + chr3_1:86424592-86424611 None:intergenic 20.0%
!!! AAGTTCGATTTTAAAAAAGA+GGG + chr3_1:86424621-86424640 None:intergenic 20.0%
!!! AAAGTTCGATTTTAAAAAAG+AGG + chr3_1:86424622-86424641 None:intergenic 20.0%
!!! ACAAGCTAATATTTTCAAAA+GGG + chr3_1:86424656-86424675 None:intergenic 20.0%
!!! AACAAGCTAATATTTTCAAA+AGG + chr3_1:86424657-86424676 None:intergenic 20.0%
!! AAAACAAATGTGAAAATAGA+GGG - chr3_1:86424838-86424857 Msa0383510:intron 20.0%
!!! CTTTAGTTTAATAAAATAGG+GGG - chr3_1:86424869-86424888 Msa0383510:intron 20.0%
!!! AGAGTTTTTTTTTTTTGGAA+AGG - chr3_1:86425311-86425330 Msa0383510:intron 20.0%
!!! TTTTATCAAAACAAACTAAC+TGG + chr3_1:86425510-86425529 None:intergenic 20.0%
!! ACAAAATTGCAACATAAATT+GGG + chr3_1:86425734-86425753 None:intergenic 20.0%
!! AACAAAATTGCAACATAAAT+TGG + chr3_1:86425735-86425754 None:intergenic 20.0%
!!! TAACTTTTTCTTATACACTT+TGG - chr3_1:86426790-86426809 Msa0383510:intron 20.0%
!!! TTTATTTTCACGAAAATTCA+CGG - chr3_1:86426929-86426948 Msa0383510:CDS 20.0%
!!! ACACTATTTTTTTTGTTTGA+GGG + chr3_1:86427087-86427106 None:intergenic 20.0%
!!! AACACTATTTTTTTTGTTTG+AGG + chr3_1:86427088-86427107 None:intergenic 20.0%
!! ACTTATAAAAGAGAGTTTAA+AGG + chr3_1:86427169-86427188 None:intergenic 20.0%
!! ATGAAAAATGCTAAATAGTA+CGG + chr3_1:86427301-86427320 None:intergenic 20.0%
!!! TTTTCATTAGTAAAACTGTT+AGG - chr3_1:86427314-86427333 Msa0383510:intron 20.0%
!!! TATGTAATACATTTTCATCA+TGG - chr3_1:86427647-86427666 Msa0383510:intron 20.0%
!!! TTAAAACACAGTTAATTTGA+TGG + chr3_1:86427689-86427708 None:intergenic 20.0%
!! AATAATTATGTTCAATAGAG+TGG + chr3_1:86428459-86428478 None:intergenic 20.0%
!! ACTCTATTGAACATAATTAT+TGG - chr3_1:86428458-86428477 Msa0383510:exon 20.0%
!!! TTGGATACATTCTAATTTTT+TGG + chr3_1:86428554-86428573 None:intergenic 20.0%
!! GATATAAAAATTTCATCGTT+TGG + chr3_1:86428573-86428592 None:intergenic 20.0%
!!! GAAATTTTTATATCATTCAG+AGG - chr3_1:86428579-86428598 Msa0383510:five_prime_UTR 20.0%
!! CTAACAAAAATTGATAGTTG+TGG + chr3_1:86423839-86423858 None:intergenic 25.0%
! GTAAATGGTATCTAATTTCA+TGG - chr3_1:86423892-86423911 Msa0383510:three_prime_UTR 25.0%
! CACACATTAAATTGAGAAAT+AGG + chr3_1:86424251-86424270 None:intergenic 25.0%
!!! TGATTCAGCAAAATTGATTT+TGG - chr3_1:86424309-86424328 Msa0383510:intron 25.0%
!!! AGTTCGATTTTAAAAAAGAG+GGG + chr3_1:86424620-86424639 None:intergenic 25.0%
!! AAGCTAATATTTTCAAAAGG+GGG + chr3_1:86424654-86424673 None:intergenic 25.0%
!! CAAGCTAATATTTTCAAAAG+GGG + chr3_1:86424655-86424674 None:intergenic 25.0%
! TTGTCTTAAGATTCAACATT+GGG + chr3_1:86424737-86424756 None:intergenic 25.0%
! TTTGTCTTAAGATTCAACAT+TGG + chr3_1:86424738-86424757 None:intergenic 25.0%
!! CTCTATTTTCACATTTGTTT+TGG + chr3_1:86424839-86424858 None:intergenic 25.0%
! CAAAACAAATGTGAAAATAG+AGG - chr3_1:86424837-86424856 Msa0383510:intron 25.0%
!! ACTAGGCTTAATTATACTTT+TGG + chr3_1:86424896-86424915 None:intergenic 25.0%
! AACAAACAAACAAACAAACT+AGG + chr3_1:86424913-86424932 None:intergenic 25.0%
!!! TTTTTTCTCACTCTTCAATT+TGG - chr3_1:86424941-86424960 Msa0383510:CDS 25.0%
!!! TTCAATTTGGTGTTTATGAA+AGG - chr3_1:86424954-86424973 Msa0383510:intron 25.0%
! AGATAAAATTCTCAGCAAAA+TGG - chr3_1:86425017-86425036 Msa0383510:intron 25.0%
! GATAAAATTCTCAGCAAAAT+GGG - chr3_1:86425018-86425037 Msa0383510:intron 25.0%
! CAAAAAAAAAAAACTCTAGC+AGG + chr3_1:86425308-86425327 None:intergenic 25.0%
!!! CTGCTAGAGTTTTTTTTTTT+TGG - chr3_1:86425306-86425325 Msa0383510:intron 25.0%
!!! GAAACAAGAAGTATATTTTC+TGG + chr3_1:86426204-86426223 None:intergenic 25.0%
!! TAGGTAACGAAATATGTTTT+TGG - chr3_1:86426486-86426505 Msa0383510:intron 25.0%
!!! TAACGAAATATGTTTTTGGT+TGG - chr3_1:86426490-86426509 Msa0383510:intron 25.0%
! TCATCAACAAGAAATAGATT+TGG + chr3_1:86426868-86426887 None:intergenic 25.0%
!!! TCTTCTGTATCATTAGTTTT+TGG - chr3_1:86427947-86427966 Msa0383510:intron 25.0%
!!! CTTCTGTATCATTAGTTTTT+GGG - chr3_1:86427948-86427967 Msa0383510:intron 25.0%
! CCTGCATAAAGAATAATAAT+CGG + chr3_1:86428023-86428042 None:intergenic 25.0%
! ATACAACAAATCAGTTAATG+AGG + chr3_1:86428079-86428098 None:intergenic 25.0%
!!! TCATTAACTGATTTGTTGTA+TGG - chr3_1:86428078-86428097 Msa0383510:intron 25.0%
! ATAACCATTCAAATAACACA+AGG + chr3_1:86428194-86428213 None:intergenic 25.0%
!!! GACTACAATTTTGCTTTAAA+TGG - chr3_1:86428224-86428243 Msa0383510:CDS 25.0%
! TGAACATAATTATTGGATAG+AGG - chr3_1:86428465-86428484 Msa0383510:exon 25.0%
TGGTATCTAATTTCATGGAA+AGG - chr3_1:86423897-86423916 Msa0383510:three_prime_UTR 30.0%
GGTATCTAATTTCATGGAAA+GGG - chr3_1:86423898-86423917 Msa0383510:three_prime_UTR 30.0%
!! TTACATACCTTTGGAATTGA+AGG + chr3_1:86423977-86423996 None:intergenic 30.0%
GAGGAAAATTTACATACCTT+TGG + chr3_1:86423986-86424005 None:intergenic 30.0%
AATCAAGAGAGTGAAATTGA+AGG + chr3_1:86424008-86424027 None:intergenic 30.0%
!! ATTTTAGGTACCCAGAAATT+TGG - chr3_1:86424048-86424067 Msa0383510:intron 30.0%
GAAAGAAGTTAGTTACATCT+AGG + chr3_1:86424178-86424197 None:intergenic 30.0%
TAAGCACTTATTAGACTGTT+TGG + chr3_1:86424456-86424475 None:intergenic 30.0%
!!! ATTAAGGGTCTTTTTTGGAT+TGG + chr3_1:86424502-86424521 None:intergenic 30.0%
!!! CACAAATTAAGGGTCTTTTT+TGG + chr3_1:86424507-86424526 None:intergenic 30.0%
AGCATCAAGTCACAAATTAA+GGG + chr3_1:86424517-86424536 None:intergenic 30.0%
!! GTTCGATTTTAAAAAAGAGG+GGG + chr3_1:86424619-86424638 None:intergenic 30.0%
! AGCTAATATTTTCAAAAGGG+GGG + chr3_1:86424653-86424672 None:intergenic 30.0%
TGTCTTAAGATTCAACATTG+GGG + chr3_1:86424736-86424755 None:intergenic 30.0%
!!! GATACCTAAACTCACTTTTT+TGG - chr3_1:86424769-86424788 Msa0383510:CDS 30.0%
GAATCCAAAAAAGTGAGTTT+AGG + chr3_1:86424776-86424795 None:intergenic 30.0%
! TTCCAAAAGCCACAATTTTT+AGG - chr3_1:86424793-86424812 Msa0383510:CDS 30.0%
! TCCAAAAGCCACAATTTTTA+GGG - chr3_1:86424794-86424813 Msa0383510:CDS 30.0%
!!! GTTTTTTGCCCTAAAAATTG+TGG + chr3_1:86424805-86424824 None:intergenic 30.0%
!!! TTTTTAGGGCAAAAAACATG+AGG - chr3_1:86424808-86424827 Msa0383510:intron 30.0%
!! TTTGGTGTTTATGAAAGGTT+TGG - chr3_1:86424959-86424978 Msa0383510:intron 30.0%
TTACAATGCATATGTGATTC+CGG + chr3_1:86425437-86425456 None:intergenic 30.0%
CAAAACAAACTAACTGGATA+TGG + chr3_1:86425504-86425523 None:intergenic 30.0%
!!! TTTGTGCTGCTTGTTTTTTT+AGG - chr3_1:86425686-86425705 Msa0383510:intron 30.0%
!!! TTTTTTAGGTCAGGAAGTAT+AGG - chr3_1:86425700-86425719 Msa0383510:intron 30.0%
ATCTATGAATAAATCCCACA+TGG + chr3_1:86425802-86425821 None:intergenic 30.0%
! TTCCTTTCAACGCATTTTAA+TGG - chr3_1:86425842-86425861 Msa0383510:intron 30.0%
AAATTACTTGATTGGTACAG+AGG - chr3_1:86426321-86426340 Msa0383510:intron 30.0%
AATTACTTGATTGGTACAGA+GGG - chr3_1:86426322-86426341 Msa0383510:intron 30.0%
TGTCAGATGAAACACAATTT+AGG - chr3_1:86426348-86426367 Msa0383510:CDS 30.0%
ATAATGCCTTGTAGAAACAA+TGG + chr3_1:86426447-86426466 None:intergenic 30.0%
! CTACTGGAAACATTTTTAAC+AGG + chr3_1:86426596-86426615 None:intergenic 30.0%
AGGATAATATAAGATGAGCT+GGG + chr3_1:86426658-86426677 None:intergenic 30.0%
TAGGATAATATAAGATGAGC+TGG + chr3_1:86426659-86426678 None:intergenic 30.0%
ATAGTGAAGATCAAAGATCT+AGG + chr3_1:86426678-86426697 None:intergenic 30.0%
GCACAATCAAAATTGGAAAT+TGG + chr3_1:86426744-86426763 None:intergenic 30.0%
! CTTTTTCTTATACACTTTGG+TGG - chr3_1:86426793-86426812 Msa0383510:intron 30.0%
CATAATAATAGATACCGTTC+AGG + chr3_1:86426975-86426994 None:intergenic 30.0%
TGCAATTCAACCAAAGAAAA+AGG - chr3_1:86427014-86427033 Msa0383510:intron 30.0%
AATTCAACCAAAGAAAAAGG+TGG - chr3_1:86427017-86427036 Msa0383510:intron 30.0%
GGGAATTAATCTTAAGCAAA+CGG + chr3_1:86427067-86427086 None:intergenic 30.0%
! TTTTCCATCTATCAAGATGT+AGG - chr3_1:86427468-86427487 Msa0383510:intron 30.0%
GTTTCAGACTCATGAAAATT+TGG - chr3_1:86427559-86427578 Msa0383510:intron 30.0%
CCGATTATTATTCTTTATGC+AGG - chr3_1:86428020-86428039 Msa0383510:intron 30.0%
! TAAGTTGGAATCCTAAAGAA+GGG + chr3_1:86428159-86428178 None:intergenic 30.0%
!! TTAAGTTGGAATCCTAAAGA+AGG + chr3_1:86428160-86428179 None:intergenic 30.0%
!!! AGGCATTTGACTTTTTAAGT+TGG + chr3_1:86428174-86428193 None:intergenic 30.0%
!! AATGCCTTGTGTTATTTGAA+TGG - chr3_1:86428187-86428206 Msa0383510:CDS 30.0%
GGATTTATCATTTATTGCAG+TGG - chr3_1:86428245-86428264 Msa0383510:CDS 30.0%
TAATTCCAGAGACAAGATAC+GGG + chr3_1:86423795-86423814 None:intergenic 35.0%
GTAATTCCAGAGACAAGATA+CGG + chr3_1:86423796-86423815 None:intergenic 35.0%
GGCCATTATGTCTTTAATCT+CGG - chr3_1:86424139-86424158 Msa0383510:three_prime_UTR 35.0%
TTAATGTGTGTTTCGTTCAC+TGG - chr3_1:86424261-86424280 Msa0383510:CDS 35.0%
CAGCATCAAGTCACAAATTA+AGG + chr3_1:86424518-86424537 None:intergenic 35.0%
! GCTAAAAATCACCATTTTGG+GGG + chr3_1:86424709-86424728 None:intergenic 35.0%
! CGCTAAAAATCACCATTTTG+GGG + chr3_1:86424710-86424729 None:intergenic 35.0%
! GCGCTAAAAATCACCATTTT+GGG + chr3_1:86424711-86424730 None:intergenic 35.0%
! AGCGCTAAAAATCACCATTT+TGG + chr3_1:86424712-86424731 None:intergenic 35.0%
ATTATATGGGTCTTCAACTC+AGG + chr3_1:86425544-86425563 None:intergenic 35.0%
GTTGAAGACCCATATAATAC+CGG - chr3_1:86425546-86425565 Msa0383510:intron 35.0%
TTGAAGACCCATATAATACC+GGG - chr3_1:86425547-86425566 Msa0383510:intron 35.0%
GTGGGATTTATTCATAGATC+TGG - chr3_1:86425803-86425822 Msa0383510:intron 35.0%
CACCATTAAAATGCGTTGAA+AGG + chr3_1:86425847-86425866 None:intergenic 35.0%
!!! CGCATTTTAATGGTGTTATC+AGG - chr3_1:86425852-86425871 Msa0383510:intron 35.0%
ACATGATGAATAAACGCTTG+AGG + chr3_1:86426011-86426030 None:intergenic 35.0%
!!! TATATTTTCTGGCTTCAGGT+CGG + chr3_1:86426193-86426212 None:intergenic 35.0%
!!! GAAGTATATTTTCTGGCTTC+AGG + chr3_1:86426197-86426216 None:intergenic 35.0%
TGTAAAGCTTCCTAGTTGTA+AGG - chr3_1:86426233-86426252 Msa0383510:intron 35.0%
ATACCAAGTACCTTACAACT+AGG + chr3_1:86426246-86426265 None:intergenic 35.0%
!! GCGATTAAGCTGATTGATTT+TGG - chr3_1:86426389-86426408 Msa0383510:CDS 35.0%
TTGTAGAAACAATGGAGCTA+TGG + chr3_1:86426439-86426458 None:intergenic 35.0%
!! ATAGCTCCATTGTTTCTACA+AGG - chr3_1:86426438-86426457 Msa0383510:CDS 35.0%
ATATAAGATGAGCTGGGAAA+TGG + chr3_1:86426652-86426671 None:intergenic 35.0%
TGTCAGTCATTACAGTACAA+AGG + chr3_1:86426716-86426735 None:intergenic 35.0%
! CATGAGAGCACAATCAAAAT+TGG + chr3_1:86426751-86426770 None:intergenic 35.0%
!! TTTTGATTGTGCTCTCATGA+TGG - chr3_1:86426752-86426771 Msa0383510:intron 35.0%
! AAGCGAAGTGCTATATAGTA+CGG - chr3_1:86426904-86426923 Msa0383510:intron 35.0%
GAACATATAAGCAACCTGAA+CGG - chr3_1:86426958-86426977 Msa0383510:intron 35.0%
AACGGTGCAACAAATTGAAA+CGG + chr3_1:86427049-86427068 None:intergenic 35.0%
! TGCATCTAAAATGACATTCC+AGG - chr3_1:86427376-86427395 Msa0383510:intron 35.0%
TAAAATGACATTCCAGGTCT+AGG - chr3_1:86427382-86427401 Msa0383510:intron 35.0%
AAAATGACATTCCAGGTCTA+GGG - chr3_1:86427383-86427402 Msa0383510:intron 35.0%
CATTCTCATTGAGTTATGCA+CGG - chr3_1:86427441-86427460 Msa0383510:intron 35.0%
!! ATGTAGGCATGTTTTGAATC+TGG - chr3_1:86427484-86427503 Msa0383510:intron 35.0%
!!! TGGTTTTAGCATTCTAACTG+TGG - chr3_1:86427513-86427532 Msa0383510:intron 35.0%
! TAACTGTGGAACTTTTGACA+GGG - chr3_1:86427527-86427546 Msa0383510:intron 35.0%
!! TAAGTTATGAAGCATTGACC+AGG - chr3_1:86427727-86427746 Msa0383510:intron 35.0%
ACGGAAAAATATTTCAAGCG+TGG - chr3_1:86427833-86427852 Msa0383510:intron 35.0%
ATAAATGCAGTGAAGAAGCT+TGG - chr3_1:86427899-86427918 Msa0383510:intron 35.0%
CATTGCAATGCAAATACAGT+TGG + chr3_1:86428417-86428436 None:intergenic 35.0%
CAACTGTATTTGCATTGCAA+TGG - chr3_1:86428415-86428434 Msa0383510:CDS 35.0%
TGTATTTGCATTGCAATGGA+TGG - chr3_1:86428419-86428438 Msa0383510:CDS 35.0%
GTATTTGCATTGCAATGGAT+GGG - chr3_1:86428420-86428439 Msa0383510:CDS 35.0%
GAATTATGTTGTACTCGAGA+AGG - chr3_1:86428487-86428506 Msa0383510:five_prime_UTR 35.0%
TCAAATATTGATGTCCCAGT+AGG + chr3_1:86428623-86428642 None:intergenic 35.0%
ACTGGGACATCAATATTTGA+AGG - chr3_1:86428623-86428642 Msa0383510:five_prime_UTR 35.0%
AATTGAACCCTAACTCCCAA+CGG - chr3_1:86423728-86423747 Msa0383510:three_prime_UTR 40.0%
GAATAAACCGTTGGGAGTTA+GGG + chr3_1:86423738-86423757 None:intergenic 40.0%
AGAATAAACCGTTGGGAGTT+AGG + chr3_1:86423739-86423758 None:intergenic 40.0%
TAACTCCCAACGGTTTATTC+TGG - chr3_1:86423738-86423757 Msa0383510:three_prime_UTR 40.0%
GAGAACCAGAATAAACCGTT+GGG + chr3_1:86423746-86423765 None:intergenic 40.0%
AGTTGTGGCGAATATGAAGA+TGG + chr3_1:86423824-86423843 None:intergenic 40.0%
!! CATACCTTTGGAATTGAAGG+AGG + chr3_1:86423974-86423993 None:intergenic 40.0%
CAAGAGAGTGAAATTGAAGG+AGG + chr3_1:86424005-86424024 None:intergenic 40.0%
CGCCGAGATTAAAGACATAA+TGG + chr3_1:86424144-86424163 None:intergenic 40.0%
AATAAGCTGAAAACAGCTCG+TGG - chr3_1:86424400-86424419 Msa0383510:intron 40.0%
!! AAAGAGGGGGCTATTTTCAT+GGG + chr3_1:86424606-86424625 None:intergenic 40.0%
!! AAAAGAGGGGGCTATTTTCA+TGG + chr3_1:86424607-86424626 None:intergenic 40.0%
!! ATTTTGGGGGCAAAAAGGAT+GGG + chr3_1:86424696-86424715 None:intergenic 40.0%
! GCCCTAAAAATTGTGGCTTT+TGG + chr3_1:86424798-86424817 None:intergenic 40.0%
TTAGGGCAAAAAACATGAGG+CGG - chr3_1:86424811-86424830 Msa0383510:intron 40.0%
ATTCTCAGCAAAATGGGTGA+AGG - chr3_1:86425024-86425043 Msa0383510:intron 40.0%
CTTGATCGCTACATAATCTC+TGG + chr3_1:86425173-86425192 None:intergenic 40.0%
CAGAGATTATGTAGCGATCA+AGG - chr3_1:86425171-86425190 Msa0383510:intron 40.0%
AAAGGATACCTGCTAGAGTT+TGG - chr3_1:86425329-86425348 Msa0383510:intron 40.0%
ATCAGTAACCAAACTCTAGC+AGG + chr3_1:86425340-86425359 None:intergenic 40.0%
!! TCCTGAATTGGTTCGATTAC+CGG - chr3_1:86425415-86425434 Msa0383510:intron 40.0%
! TGGGTGTCATCATTCATGAT+TGG - chr3_1:86425607-86425626 Msa0383510:intron 40.0%
! GGGTGTCATCATTCATGATT+GGG - chr3_1:86425608-86425627 Msa0383510:intron 40.0%
AGAACAAGTAGACTATGTGC+AGG + chr3_1:86425666-86425685 None:intergenic 40.0%
!!! GCTGCTTGTTTTTTTAGGTC+AGG - chr3_1:86425691-86425710 Msa0383510:intron 40.0%
TATGTACACACATGTCCATG+TGG - chr3_1:86425784-86425803 Msa0383510:intron 40.0%
ATGTACACACATGTCCATGT+GGG - chr3_1:86425785-86425804 Msa0383510:intron 40.0%
TCATAGATCTGGAAACTGAG+TGG - chr3_1:86425814-86425833 Msa0383510:intron 40.0%
! TATCAGGTCTTTGAGAAGCT+TGG - chr3_1:86425868-86425887 Msa0383510:intron 40.0%
ATTCACGAACAAGATCCACA+GGG + chr3_1:86425939-86425958 None:intergenic 40.0%
AATTCACGAACAAGATCCAC+AGG + chr3_1:86425940-86425959 None:intergenic 40.0%
GTGGATCTTGTTCGTGAATT+TGG - chr3_1:86425940-86425959 Msa0383510:CDS 40.0%
! TGAATTTGGACGACAGCTTT+TGG - chr3_1:86425954-86425973 Msa0383510:CDS 40.0%
ACAAAGATACACTGCATCCT+GGG + chr3_1:86426097-86426116 None:intergenic 40.0%
AACAAAGATACACTGCATCC+TGG + chr3_1:86426098-86426117 None:intergenic 40.0%
! CTTCCTAGTTGTAAGGTACT+TGG - chr3_1:86426240-86426259 Msa0383510:intron 40.0%
AGCTTAATCGCACTAGACTT+AGG + chr3_1:86426380-86426399 None:intergenic 40.0%
GTTACCTAAGATAACCTCAG+GGG + chr3_1:86426474-86426493 None:intergenic 40.0%
CGTTACCTAAGATAACCTCA+GGG + chr3_1:86426475-86426494 None:intergenic 40.0%
TCGTTACCTAAGATAACCTC+AGG + chr3_1:86426476-86426495 None:intergenic 40.0%
!!! GTTTTTGGTTGGTCACAATG+TGG - chr3_1:86426501-86426520 Msa0383510:intron 40.0%
! AGCGAAGTGCTATATAGTAC+GGG - chr3_1:86426905-86426924 Msa0383510:intron 40.0%
GCTAAATAGTACGGAACTTG+TGG + chr3_1:86427292-86427311 None:intergenic 40.0%
CATGCCTACATCTTGATAGA+TGG + chr3_1:86427475-86427494 None:intergenic 40.0%
!! TGTTTTGAATCTGGAACAGC+TGG - chr3_1:86427493-86427512 Msa0383510:intron 40.0%
! CTAACTGTGGAACTTTTGAC+AGG - chr3_1:86427526-86427545 Msa0383510:intron 40.0%
! TCATGAAAATTTGGAGCACC+TGG - chr3_1:86427568-86427587 Msa0383510:intron 40.0%
!! GCAATGATGGAGAGAGTTTT+GGG - chr3_1:86427590-86427609 Msa0383510:intron 40.0%
GATCTTTGAACCATATGCTC+TGG + chr3_1:86427623-86427642 None:intergenic 40.0%
TTTGCTTCACAATATCTCGC+AGG - chr3_1:86427807-86427826 Msa0383510:intron 40.0%
TTGCTTCACAATATCTCGCA+GGG - chr3_1:86427808-86427827 Msa0383510:intron 40.0%
! GAAGAAGCTTGGTGATCTTA+AGG - chr3_1:86427910-86427929 Msa0383510:intron 40.0%
CTCTTGATCATCCCTTCTTT+AGG - chr3_1:86428145-86428164 Msa0383510:intron 40.0%
GGAGAACCAGAATAAACCGT+TGG + chr3_1:86423747-86423766 None:intergenic 45.0%
CTGTGTCGTCTGTGTAAGAA+CGG + chr3_1:86423768-86423787 None:intergenic 45.0%
TCATGGAAAGGGAACGAACT+CGG - chr3_1:86423909-86423928 Msa0383510:three_prime_UTR 45.0%
TCCACCTCCTTCAATTCCAA+AGG - chr3_1:86423967-86423986 Msa0383510:intron 45.0%
!! ACCTTTGGAATTGAAGGAGG+TGG + chr3_1:86423971-86423990 None:intergenic 45.0%
CCAACCACTGCCAAATTTCT+GGG + chr3_1:86424061-86424080 None:intergenic 45.0%
ACCAACCACTGCCAAATTTC+TGG + chr3_1:86424062-86424081 None:intergenic 45.0%
!! AATTTGGCAGTGGTTGGTGA+CGG - chr3_1:86424064-86424083 Msa0383510:three_prime_UTR 45.0%
!! TGTTGGCTTGATTGCACTTC+TGG - chr3_1:86424564-86424583 Msa0383510:intron 45.0%
!! CATTTTGGGGGCAAAAAGGA+TGG + chr3_1:86424697-86424716 None:intergenic 45.0%
! CATCCTTTTTGCCCCCAAAA+TGG - chr3_1:86424695-86424714 Msa0383510:intron 45.0%
!! TCACCATTTTGGGGGCAAAA+AGG + chr3_1:86424701-86424720 None:intergenic 45.0%
TAGGGCAAAAAACATGAGGC+GGG - chr3_1:86424812-86424831 Msa0383510:intron 45.0%
GCAAAATGGGTGAAGGTTAG+CGG - chr3_1:86425031-86425050 Msa0383510:intron 45.0%
ACATTCCAAAACTCGACCGA+AGG + chr3_1:86425137-86425156 None:intergenic 45.0%
!!! TCGGTCGAGTTTTGGAATGT+TGG - chr3_1:86425137-86425156 Msa0383510:intron 45.0%
!!! CGGTCGAGTTTTGGAATGTT+GGG - chr3_1:86425138-86425157 Msa0383510:intron 45.0%
ACGTCTTGTGAAGAGTGATG+TGG - chr3_1:86425252-86425271 Msa0383510:intron 45.0%
CGTCTTGTGAAGAGTGATGT+GGG - chr3_1:86425253-86425272 Msa0383510:intron 45.0%
GCTGTGTACAGATCCTGAAT+TGG - chr3_1:86425403-86425422 Msa0383510:intron 45.0%
TCCGGTAATCGAACCAATTC+AGG + chr3_1:86425419-86425438 None:intergenic 45.0%
AAGACCCATATAATACCGGG+TGG - chr3_1:86425550-86425569 Msa0383510:intron 45.0%
ACAAGTAGACTATGTGCAGG+TGG + chr3_1:86425663-86425682 None:intergenic 45.0%
TAAATACTGCCCATTCCCTG+TGG - chr3_1:86425921-86425940 Msa0383510:CDS 45.0%
GAACAAGATCCACAGGGAAT+GGG + chr3_1:86425933-86425952 None:intergenic 45.0%
TGGAATCTGTAGCATGTCTG+TGG - chr3_1:86425974-86425993 Msa0383510:CDS 45.0%
GGGACAAACTAAGCAAGCTA+AGG + chr3_1:86426077-86426096 None:intergenic 45.0%
!! TAGCTTGCTTAGTTTGTCCC+AGG - chr3_1:86426077-86426096 Msa0383510:intron 45.0%
GTCAAGAACGACATTTGCTC+TGG + chr3_1:86426556-86426575 None:intergenic 45.0%
!! GTGCTGACCACCTTTTTCTT+TGG + chr3_1:86427027-86427046 None:intergenic 45.0%
CTTGTGGCCACGAAAATTCA+CGG + chr3_1:86427276-86427295 None:intergenic 45.0%
GGTCATCTCCATGTGATTTG+TGG - chr3_1:86427407-86427426 Msa0383510:intron 45.0%
CCAACACTCCACAAATCACA+TGG + chr3_1:86427418-86427437 None:intergenic 45.0%
! CCATGTGATTTGTGGAGTGT+TGG - chr3_1:86427415-86427434 Msa0383510:intron 45.0%
CTCATTGAGTTATGCACGGT+TGG - chr3_1:86427445-86427464 Msa0383510:intron 45.0%
AAACTCTCTCCATCATTGCC+AGG + chr3_1:86427589-86427608 None:intergenic 45.0%
!! GGCAATGATGGAGAGAGTTT+TGG - chr3_1:86427589-86427608 Msa0383510:intron 45.0%
TGAACCATATGCTCTGGTAG+AGG + chr3_1:86427617-86427636 None:intergenic 45.0%
TGCTTCACAATATCTCGCAG+GGG - chr3_1:86427809-86427828 Msa0383510:intron 45.0%
AGAAGGGATGATCAAGAGCT+TGG + chr3_1:86428143-86428162 None:intergenic 45.0%
TTTGCATTGCAATGGATGGG+TGG - chr3_1:86428423-86428442 Msa0383510:CDS 45.0%
GTACTCGAGAAGGCTTGAAA+AGG - chr3_1:86428497-86428516 Msa0383510:five_prime_UTR 45.0%
!! ATATCATTCAGAGGGCACTC+TGG - chr3_1:86428588-86428607 Msa0383510:five_prime_UTR 45.0%
!!! TATTTTATTTTTGAAATTTT+AGG - chr3_1:86424033-86424052 Msa0383510:intron 5.0%
CGTTCTTACACAGACGACAC+AGG - chr3_1:86423766-86423785 Msa0383510:three_prime_UTR 50.0%
GGAATCCCGTATCTTGTCTC+TGG - chr3_1:86423787-86423806 Msa0383510:three_prime_UTR 50.0%
GGTACCCAGAAATTTGGCAG+TGG - chr3_1:86424054-86424073 Msa0383510:three_prime_UTR 50.0%
CCCAGAAATTTGGCAGTGGT+TGG - chr3_1:86424058-86424077 Msa0383510:three_prime_UTR 50.0%
TCACGATCGTCGTCTCTTCT+TGG + chr3_1:86424118-86424137 None:intergenic 50.0%
AGAAGAGACGACGATCGTGA+TGG - chr3_1:86424118-86424137 Msa0383510:three_prime_UTR 50.0%
AGGGCAAAAAACATGAGGCG+GGG - chr3_1:86424813-86424832 Msa0383510:intron 50.0%
CAGCATGTTGCTAGTGCTGT+AGG - chr3_1:86425109-86425128 Msa0383510:intron 50.0%
AGAGTGATGTGGGATGCTCA+CGG - chr3_1:86425263-86425282 Msa0383510:intron 50.0%
ATGGGTCTTCAACTCAGGTC+AGG + chr3_1:86425539-86425558 None:intergenic 50.0%
ACCCATATAATACCGGGTGG+TGG - chr3_1:86425553-86425572 Msa0383510:intron 50.0%
CCCACCACCCGGTATTATAT+GGG + chr3_1:86425557-86425576 None:intergenic 50.0%
CCCATATAATACCGGGTGGT+GGG - chr3_1:86425554-86425573 Msa0383510:intron 50.0%
CCATATAATACCGGGTGGTG+GGG - chr3_1:86425555-86425574 Msa0383510:intron 50.0%
CGAACAAGATCCACAGGGAA+TGG + chr3_1:86425934-86425953 None:intergenic 50.0%
! AAGGCATTATAGAGCCCCTG+AGG - chr3_1:86426457-86426476 Msa0383510:CDS 50.0%
AGAGCCCCTGAGGTTATCTT+AGG - chr3_1:86426467-86426486 Msa0383510:CDS 50.0%
CAGAGATGTGATGCAGCTAC+TGG + chr3_1:86426612-86426631 None:intergenic 50.0%
CAGTAGCTGCATCACATCTC+TGG - chr3_1:86426610-86426629 Msa0383510:intron 50.0%
TTCACGGACAGGCTAAACTG+CGG + chr3_1:86427260-86427279 None:intergenic 50.0%
! AGCCTGTCCGTGAATTTTCG+TGG - chr3_1:86427266-86427285 Msa0383510:CDS 50.0%
ATGACATTCCAGGTCTAGGG+TGG - chr3_1:86427386-86427405 Msa0383510:intron 50.0%
! CTGTGGAACTTTTGACAGGG+AGG - chr3_1:86427530-86427549 Msa0383510:intron 50.0%
! TTTGGAGCACCTGGCAATGA+TGG - chr3_1:86427577-86427596 Msa0383510:intron 50.0%
CACAATATCTCGCAGGGGTA+CGG - chr3_1:86427814-86427833 Msa0383510:intron 50.0%
AGCGTGGATCACGACTAAGA+TGG - chr3_1:86427849-86427868 Msa0383510:intron 50.0%
TCCCTTGAAACAGCTCCTTC+GGG + chr3_1:86427875-86427894 None:intergenic 50.0%
CTCCCTTGAAACAGCTCCTT+CGG + chr3_1:86427876-86427895 None:intergenic 50.0%
CACGTCATGTTGAGTCGTCA+AGG - chr3_1:86428052-86428071 Msa0383510:intron 50.0%
CGAGCAGTAATGCGTTTGGA+TGG + chr3_1:86428120-86428139 None:intergenic 50.0%
TTGGCGAGCAGTAATGCGTT+TGG + chr3_1:86428124-86428143 None:intergenic 50.0%
TCTGGTAAGCAAGGCCTACT+GGG - chr3_1:86428606-86428625 Msa0383510:five_prime_UTR 50.0%
GAAACGACCTCGTCTCGCTT+GGG - chr3_1:86423931-86423950 Msa0383510:three_prime_UTR 55.0%
CGATCGTCGTCTCTTCTTGG+AGG + chr3_1:86424115-86424134 None:intergenic 55.0%
! GGGGGCAAAAAGGATGGGTT+GGG + chr3_1:86424691-86424710 None:intergenic 55.0%
TGGGGGCAAAAAGGATGGGT+TGG + chr3_1:86424692-86424711 None:intergenic 55.0%
GCTAGTGCTGTAGGCACCTT+CGG - chr3_1:86425118-86425137 Msa0383510:intron 55.0%
! AGGCACCTTCGGTCGAGTTT+TGG - chr3_1:86425129-86425148 Msa0383510:intron 55.0%
TCGCGATGCAGCAATGATCG+AGG - chr3_1:86425216-86425235 Msa0383510:intron 55.0%
CCCCACCACCCGGTATTATA+TGG + chr3_1:86425558-86425577 None:intergenic 55.0%
!! ATAATACCGGGTGGTGGGGT+AGG - chr3_1:86425559-86425578 Msa0383510:intron 55.0%
!! TAATACCGGGTGGTGGGGTA+GGG - chr3_1:86425560-86425579 Msa0383510:intron 55.0%
GCTTCAGGTCGGTGTGGATT+AGG + chr3_1:86426182-86426201 None:intergenic 55.0%
!! TTTCTGGCTTCAGGTCGGTG+TGG + chr3_1:86426188-86426207 None:intergenic 55.0%
TGAGCTGGGAAATGGTCGCT+GGG + chr3_1:86426644-86426663 None:intergenic 55.0%
ATGAGCTGGGAAATGGTCGC+TGG + chr3_1:86426645-86426664 None:intergenic 55.0%
GGCCACGAAAATTCACGGAC+AGG + chr3_1:86427271-86427290 None:intergenic 55.0%
GGGACCTCTACCAGAGCATA+TGG - chr3_1:86427610-86427629 Msa0383510:intron 55.0%
TCACGACTAAGATGGCCCGA+AGG - chr3_1:86427857-86427876 Msa0383510:intron 55.0%
! GCCCGAAGGAGCTGTTTCAA+GGG - chr3_1:86427871-86427890 Msa0383510:intron 55.0%
!! AGAGGGCACTCTGGTAAGCA+AGG - chr3_1:86428597-86428616 Msa0383510:five_prime_UTR 55.0%
CTCTGGTAAGCAAGGCCTAC+TGG - chr3_1:86428605-86428624 Msa0383510:five_prime_UTR 55.0%
GGAAACGACCTCGTCTCGCT+TGG - chr3_1:86423930-86423949 Msa0383510:three_prime_UTR 60.0%
!! TTGGCAGTGGTTGGTGACGG+TGG - chr3_1:86424067-86424086 Msa0383510:three_prime_UTR 60.0%
!! AATACCGGGTGGTGGGGTAG+GGG - chr3_1:86425561-86425580 Msa0383510:intron 60.0%
GGAGATGACCACCCTAGACC+TGG + chr3_1:86427397-86427416 None:intergenic 60.0%
! GGCCCGAAGGAGCTGTTTCA+AGG - chr3_1:86427870-86427889 Msa0383510:intron 60.0%
GCTGCATCCCAAGCGAGACG+AGG + chr3_1:86423941-86423960 None:intergenic 65.0%
CTATCCCCTACCCCACCACC+CGG + chr3_1:86425568-86425587 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 86423696 86428667 86423696 ID=Msa0383510;Name=Msa0383510
chr3_1 mRNA 86423696 86428667 86423696 ID=Msa0383510-mRNA-1;Parent=Msa0383510;Name=Msa0383510-mRNA-1;_AED=0.29;_eAED=0.29;_QI=200|0.81|0.83|1|0.90|0.83|12|388|435
chr3_1 exon 86423696 86423953 86423696 ID=Msa0383510-mRNA-1:exon:22904;Parent=Msa0383510-mRNA-1
chr3_1 exon 86424054 86424321 86424054 ID=Msa0383510-mRNA-1:exon:22903;Parent=Msa0383510-mRNA-1
chr3_1 exon 86424432 86424534 86424432 ID=Msa0383510-mRNA-1:exon:22902;Parent=Msa0383510-mRNA-1
chr3_1 exon 86424718 86424815 86424718 ID=Msa0383510-mRNA-1:exon:22901;Parent=Msa0383510-mRNA-1
chr3_1 exon 86424901 86424965 86424901 ID=Msa0383510-mRNA-1:exon:22900;Parent=Msa0383510-mRNA-1
chr3_1 exon 86425875 86426022 86425875 ID=Msa0383510-mRNA-1:exon:22899;Parent=Msa0383510-mRNA-1
chr3_1 exon 86426109 86426200 86426109 ID=Msa0383510-mRNA-1:exon:22898;Parent=Msa0383510-mRNA-1
chr3_1 exon 86426348 86426489 86426348 ID=Msa0383510-mRNA-1:exon:22897;Parent=Msa0383510-mRNA-1
chr3_1 exon 86426911 86426959 86426911 ID=Msa0383510-mRNA-1:exon:22896;Parent=Msa0383510-mRNA-1
chr3_1 exon 86427079 86427331 86427079 ID=Msa0383510-mRNA-1:exon:22895;Parent=Msa0383510-mRNA-1
chr3_1 exon 86428182 86428308 86428182 ID=Msa0383510-mRNA-1:exon:22894;Parent=Msa0383510-mRNA-1
chr3_1 exon 86428375 86428667 86428375 ID=Msa0383510-mRNA-1:exon:22893;Parent=Msa0383510-mRNA-1
chr3_1 five_prime_UTR 86428468 86428667 86428468 ID=Msa0383510-mRNA-1:five_prime_utr;Parent=Msa0383510-mRNA-1
chr3_1 CDS 86428375 86428467 86428375 ID=Msa0383510-mRNA-1:cds;Parent=Msa0383510-mRNA-1
chr3_1 CDS 86428182 86428308 86428182 ID=Msa0383510-mRNA-1:cds;Parent=Msa0383510-mRNA-1
chr3_1 CDS 86427079 86427331 86427079 ID=Msa0383510-mRNA-1:cds;Parent=Msa0383510-mRNA-1
chr3_1 CDS 86426911 86426959 86426911 ID=Msa0383510-mRNA-1:cds;Parent=Msa0383510-mRNA-1
chr3_1 CDS 86426348 86426489 86426348 ID=Msa0383510-mRNA-1:cds;Parent=Msa0383510-mRNA-1
chr3_1 CDS 86426109 86426200 86426109 ID=Msa0383510-mRNA-1:cds;Parent=Msa0383510-mRNA-1
chr3_1 CDS 86425875 86426022 86425875 ID=Msa0383510-mRNA-1:cds;Parent=Msa0383510-mRNA-1
chr3_1 CDS 86424901 86424965 86424901 ID=Msa0383510-mRNA-1:cds;Parent=Msa0383510-mRNA-1
chr3_1 CDS 86424718 86424815 86424718 ID=Msa0383510-mRNA-1:cds;Parent=Msa0383510-mRNA-1
chr3_1 CDS 86424432 86424534 86424432 ID=Msa0383510-mRNA-1:cds;Parent=Msa0383510-mRNA-1
chr3_1 CDS 86424184 86424321 86424184 ID=Msa0383510-mRNA-1:cds;Parent=Msa0383510-mRNA-1
chr3_1 three_prime_UTR 86424054 86424183 86424054 ID=Msa0383510-mRNA-1:three_prime_utr;Parent=Msa0383510-mRNA-1
chr3_1 three_prime_UTR 86423696 86423953 86423696 ID=Msa0383510-mRNA-1:three_prime_utr;Parent=Msa0383510-mRNA-1
Gene Sequence

>Msa0383510

ATGGTATCTAATTTCATGGAAAGGGAACGAACTCGGAAACGACCTCGTCTCGCTTGGGATGCAGCTGCAGCTCCACCTCCTTCAATTCCAAAGGTACCCAGAAATTTGGCAGTGGTTGGTGACGGTGGAATCGAAAGAAAGTATGCTTCGCCTCCAAGAAGAGACGACGATCGTGATGGCCATTATGTCTTTAATCTCGGCGAAAATCTCACTCCTAGATCAAAATGGGTGAAGGTTAGCGGTCAAGTGCTCTCTGAATACAAGTTTAAATTTTTATATGACTCTGCTTGTGTCATTCAGCATGTTGCTAGTGCTGTAGGCACCTTCGGTCGAGTTTTGGAATGTTGGGATCGTCAAACCAGAGATTATGTAGCGATCAAGGTGATTAGAAGCATCAAGAAGTATCGCGATGCAGCAATGATCGAGGTTGATGTGCTTGAACGTCTTGTGAAGAGTGATGTGGGATGCTCACGCTGTGTACAGATCCTGAATTGGTTCGATTACCGGAATCACATATGCATTGTCTTTGAGAAGCTTGGACCAAGTTTATTTGATTTTCTAAAGAGAAATAAATACTGCCCATTCCCTGTGGATCTTGTTCGTGAATTTGGACGACAGCTTTTGGAATCTGTAGCATGTCTGTGGATTATTCTTGACCTCAAGCATATGCATGAACTACGCCTAATCCACACCGACCTGAAGCCAGAAAATATACTTCTTGTTTCTTCTGACTATGTAAAGCTTCCTAGTTGTAAGAGGGTTATGTCAGATGAAACACAATTTAGGTGCTTGCCTAAGTCTAGTGCGATTAAGCTGATTGATTTTGGTAGTACTGCATTTGCAAATCAGATCCATAGCTCCATTGTTTCTACAAGGCATTATAGAGCCCCTGAGGTTATCTTAGGTCTAGGGTGGTCATCTCCATGTGATTTGTGGAGTGTTGGATGCATTCTCATTGAGTTATGCACGGGAGGAGCATTGTTTCAGACTCATGAAAATTTGGAGCACCTGGCAATGATGGAGAGAGTTTTGGGACCTCTACCAGAGCATATGGTTCAAAGATCTAAGGGTACGGAAAAATATTTCAAGCGTGGATCACGACTAAGATGGCCCGAAGGAGCTGTTTCAAGGGAGAGCATAAATGCAGTGAAGAAGCTTGGTGATCTTAAGGATATTATATCACGTCATGTTGAGTCGTCAAGGTCCTCATTAACTGATTTGTTGTATGGCTTATTAACATATGAACCATCCAAACGCATTACTGCTCGCCAAGCTCTTGATCATCCCTTCTTTAGGATTCCAACTTAA
Protein sequence

>Msa0383510

MVSNFMERERTRKRPRLAWDAAAAPPPSIPKVPRNLAVVGDGGIERKYASPPRRDDDRDGHYVFNLGENLTPRSKWVKVSGQVLSEYKFKFLYDSACVIQHVASAVGTFGRVLECWDRQTRDYVAIKVIRSIKKYRDAAMIEVDVLERLVKSDVGCSRCVQILNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVACLWIILDLKHMHELRLIHTDLKPENILLVSSDYVKLPSCKRVMSDETQFRCLPKSSAIKLIDFGSTAFANQIHSSIVSTRHYRAPEVILGLGWSSPCDLWSVGCILIELCTGGALFQTHENLEHLAMMERVLGPLPEHMVQRSKGTEKYFKRGSRLRWPEGAVSRESINAVKKLGDLKDIISRHVESSRSSLTDLLYGLLTYEPSKRITARQALDHPFFRIPT*