AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0478500

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0478500 MtrunA17_Chr8g0380101 84.896 192 11 2 1 174 327 518 2.59e-110 326
Msa0478500 MtrunA17_Chr3g0141251 83.854 192 13 2 1 174 349 540 2.59e-109 324
Msa0478500 MtrunA17_Chr3g0139361 38.974 195 101 2 2 178 357 551 1.43e-41 147
Msa0478500 MtrunA17_Chr4g0060771 38.220 191 100 2 2 174 346 536 3.47e-41 147
Msa0478500 MtrunA17_Chr5g0404391 40.217 184 92 2 2 167 328 511 5.48e-41 145
Msa0478500 MtrunA17_Chr7g0235501 41.667 192 93 3 2 174 368 559 6.61e-41 145
Msa0478500 MtrunA17_Chr4g0013841 36.916 214 113 3 2 197 552 761 3.27e-40 145
Msa0478500 MtrunA17_Chr6g0461581 40.426 188 94 2 2 171 773 960 5.29e-40 145
Msa0478500 MtrunA17_Chr7g0259141 42.553 188 90 2 2 171 463 650 7.19e-40 144
Msa0478500 MtrunA17_Chr8g0346451 37.634 186 98 2 2 169 298 483 8.70e-40 142
Msa0478500 MtrunA17_Chr7g0255871 37.383 214 112 3 2 197 362 571 1.14e-38 140
Msa0478500 MtrunA17_Chr1g0178401 39.267 191 98 2 2 174 286 476 1.27e-38 139
Msa0478500 MtrunA17_Chr1g0165451 40.741 189 93 3 2 171 272 460 1.47e-38 138
Msa0478500 MtrunA17_Chr5g0448481 40.838 191 92 2 2 171 613 803 3.57e-38 139
Msa0478500 MtrunA17_Chr1g0186131 37.766 188 99 2 2 171 508 695 3.68e-38 139
Msa0478500 MtrunA17_Chr3g0131331 35.514 214 116 3 2 197 267 476 6.72e-38 137
Msa0478500 MtrunA17_Chr4g0053681 37.234 188 100 2 2 171 339 526 6.97e-38 138
Msa0478500 MtrunA17_Chr3g0099291 37.696 191 101 2 2 174 498 688 7.03e-38 139
Msa0478500 MtrunA17_Chr5g0396201 38.542 192 100 2 1 174 381 572 3.22e-37 136
Msa0478500 MtrunA17_Chr5g0417311 35.514 214 117 4 2 197 313 523 3.25e-37 136
Msa0478500 MtrunA17_Chr7g0217701 43.125 160 73 2 2 143 357 516 5.94e-37 134
Msa0478500 MtrunA17_Chr1g0149231 35.079 191 106 2 2 174 325 515 6.36e-37 135
Msa0478500 MtrunA17_Chr1g0209951 38.421 190 99 2 2 173 573 762 7.19e-37 135
Msa0478500 MtrunA17_Chr4g0003921 36.458 192 104 2 1 174 585 776 7.45e-37 135
Msa0478500 MtrunA17_Chr1g0210371 35.874 223 121 3 2 206 343 561 8.45e-37 135
Msa0478500 MtrunA17_Chr2g0321231 34.529 223 124 3 2 206 578 796 9.45e-37 135
Msa0478500 MtrunA17_Chr5g0394591 35.981 214 115 3 2 197 443 652 1.30e-36 135
Msa0478500 MtrunA17_Chr2g0326691 34.579 214 118 3 2 197 391 600 2.83e-36 134
Msa0478500 MtrunA17_Chr8g0392771 37.696 191 101 2 2 174 447 637 2.87e-36 134
Msa0478500 MtrunA17_Chr2g0278191 44.375 160 71 2 2 143 395 554 2.89e-36 133
Msa0478500 MtrunA17_Chr4g0063341 37.173 191 101 3 2 173 450 640 4.07e-36 133
Msa0478500 MtrunA17_Chr5g0419031 38.660 194 98 4 2 174 274 467 4.30e-36 132
Msa0478500 MtrunA17_Chr1g0205461 32.735 223 128 3 2 206 495 713 4.60e-36 133
Msa0478500 MtrunA17_Chr2g0331571 36.279 215 112 5 2 197 334 542 4.66e-36 133
Msa0478500 MtrunA17_Chr2g0285601 36.449 214 114 3 2 197 326 535 5.20e-36 132
Msa0478500 MtrunA17_Chr1g0178471 37.234 188 100 2 2 171 350 537 1.09e-35 132
Msa0478500 MtrunA17_Chr4g0037631 38.953 172 87 2 2 155 394 565 1.14e-35 132
Msa0478500 MtrunA17_Chr7g0263761 36.269 193 105 2 2 176 556 748 1.33e-35 132
Msa0478500 MtrunA17_Chr8g0378921 34.685 222 122 4 2 204 328 545 1.55e-35 131
Msa0478500 MtrunA17_Chr8g0364661 34.579 214 118 3 2 197 403 612 1.89e-35 131
Msa0478500 MtrunA17_Chr7g0252001 37.173 191 102 2 2 174 385 575 2.21e-35 131
Msa0478500 MtrunA17_Chr2g0307871 36.649 191 103 2 2 174 688 878 3.11e-35 131
Msa0478500 MtrunA17_Chr3g0130351 35.263 190 103 2 2 171 366 555 3.64e-35 130
Msa0478500 MtrunA17_Chr5g0403151 35.106 188 104 2 2 171 452 639 3.99e-35 130
Msa0478500 MtrunA17_Chr3g0130341 37.173 191 102 2 2 174 476 666 4.03e-35 130
Msa0478500 MtrunA17_Chr3g0087821 35.938 192 104 3 2 174 335 526 8.41e-35 129
Msa0478500 MtrunA17_Chr8g0392791 36.649 191 103 2 2 174 479 669 9.69e-35 129
Msa0478500 MtrunA17_Chr3g0094791 37.766 188 99 3 2 171 433 620 1.05e-34 129
Msa0478500 MtrunA17_Chr4g0076041 43.125 160 73 2 2 143 395 554 1.85e-34 128
Msa0478500 MtrunA17_Chr4g0060651 34.579 214 119 3 2 197 362 572 2.15e-34 128
Msa0478500 MtrunA17_Chr4g0047321 37.895 190 98 3 2 171 302 491 3.57e-34 127
Msa0478500 MtrunA17_Chr7g0251141 38.150 173 88 3 2 156 299 470 3.77e-34 127
Msa0478500 MtrunA17_Chr8g0368101 32.727 220 126 3 5 206 473 688 3.95e-34 128
Msa0478500 MtrunA17_Chr8g0365961 32.727 220 126 3 5 206 464 679 4.39e-34 127
Msa0478500 MtrunA17_Chr6g0476781 35.263 190 103 3 2 171 328 517 4.74e-34 126
Msa0478500 MtrunA17_Chr1g0174141 40.805 174 83 4 3 156 199 372 5.14e-34 126
Msa0478500 MtrunA17_Chr1g0146681 39.062 192 97 5 2 174 381 571 5.51e-34 127
Msa0478500 MtrunA17_Chr8g0393341 33.645 214 120 3 2 197 498 707 7.17e-34 127
Msa0478500 MtrunA17_Chr3g0077311 44.311 167 71 5 2 147 94 259 8.64e-34 121
Msa0478500 MtrunA17_Chr4g0003141 33.962 212 118 4 2 195 457 664 9.50e-34 127
Msa0478500 MtrunA17_Chr8g0391681 37.569 181 95 2 3 165 667 847 1.19e-33 126
Msa0478500 MtrunA17_Chr7g0226461 38.462 169 85 3 2 151 350 518 1.56e-33 125
Msa0478500 MtrunA17_Chr7g0217631 35.514 214 116 3 2 197 413 622 1.71e-33 126
Msa0478500 MtrunA17_Chr5g0410091 33.178 214 121 4 2 197 159 368 1.75e-33 124
Msa0478500 MtrunA17_Chr4g0045481 37.766 188 99 2 2 171 518 705 2.03e-33 125
Msa0478500 MtrunA17_Chr5g0406141 36.413 184 99 2 6 171 545 728 2.04e-33 125
Msa0478500 MtrunA17_Chr5g0412001 32.727 220 127 3 2 204 389 604 2.28e-33 125
Msa0478500 MtrunA17_Chr5g0440921 39.791 191 95 3 1 171 394 584 2.44e-33 125
Msa0478500 MtrunA17_Chr4g0006361 35.938 192 104 3 2 174 466 657 3.03e-33 125
Msa0478500 MtrunA17_Chr4g0074261 38.947 190 98 2 2 173 506 695 4.34e-33 125
Msa0478500 MtrunA17_Chr4g0073691 36.126 191 104 2 2 174 496 686 4.90e-33 125
Msa0478500 MtrunA17_Chr1g0210961 37.805 164 84 2 1 146 503 666 5.32e-33 124
Msa0478500 MtrunA17_Chr4g0055661 37.056 197 105 3 2 179 347 543 5.99e-33 124
Msa0478500 MtrunA17_Chr8g0349171 35.417 192 105 3 2 174 451 642 6.32e-33 124
Msa0478500 MtrunA17_Chr1g0205351 39.267 191 96 3 1 171 394 584 6.40e-33 124
Msa0478500 MtrunA17_Chr2g0307101 36.082 194 101 4 2 173 333 525 8.27e-33 123
Msa0478500 MtrunA17_Chr7g0257861 36.979 192 101 4 2 174 309 499 9.21e-33 123
Msa0478500 MtrunA17_Chr2g0300971 35.417 192 106 2 1 174 452 643 1.15e-32 124
Msa0478500 MtrunA17_Chr4g0052501 34.171 199 111 2 2 180 564 762 1.77e-32 123
Msa0478500 MtrunA17_Chr7g0246581 31.915 188 110 2 2 171 521 708 1.88e-32 123
Msa0478500 MtrunA17_Chr4g0062971 38.342 193 99 3 2 174 736 928 2.04e-32 123
Msa0478500 MtrunA17_Chr4g0055071 39.264 163 81 2 2 146 403 565 2.28e-32 122
Msa0478500 MtrunA17_Chr2g0295771 36.508 189 105 2 2 175 219 407 2.46e-32 121
Msa0478500 MtrunA17_Chr6g0480651 32.692 208 122 2 2 191 459 666 2.46e-32 122
Msa0478500 MtrunA17_Chr2g0287441 39.241 158 78 2 1 140 535 692 2.51e-32 122
Msa0478500 MtrunA17_Chr7g0218091 38.953 172 87 2 2 155 404 575 2.53e-32 122
Msa0478500 MtrunA17_Chr5g0421551 31.818 220 129 3 2 204 389 604 2.84e-32 122
Msa0478500 MtrunA17_Chr4g0061031 34.389 221 115 4 2 196 331 547 2.87e-32 122
Msa0478500 MtrunA17_Chr7g0249241 33.632 223 126 3 2 206 468 686 2.95e-32 122
Msa0478500 MtrunA17_Chr6g0458311 36.126 191 104 2 2 174 459 649 3.84e-32 122
Msa0478500 MtrunA17_Chr4g0014491 35.979 189 103 2 2 172 733 921 4.42e-32 122
Msa0478500 MtrunA17_Chr5g0418691 38.342 193 96 4 2 171 325 517 4.70e-32 121
Msa0478500 MtrunA17_Chr7g0222961 34.634 205 114 4 2 188 433 635 5.36e-32 122
Msa0478500 MtrunA17_Chr4g0005171 33.486 218 112 4 2 198 539 744 6.80e-32 121
Msa0478500 MtrunA17_Chr1g0165051 33.333 204 118 2 3 188 597 800 6.92e-32 121
Msa0478500 MtrunA17_Chr3g0106791 36.735 147 75 2 44 172 1 147 7.08e-32 113
Msa0478500 MtrunA17_Chr1g0146671 36.364 187 100 3 5 173 630 815 7.24e-32 121
Msa0478500 MtrunA17_Chr8g0366221 33.511 188 107 2 2 171 390 577 7.87e-32 121
Msa0478500 MtrunA17_Chr3g0133921 37.267 161 83 2 2 144 539 699 9.04e-32 121
Msa0478500 MtrunA17_Chr3g0131281 34.031 191 108 2 2 174 676 866 9.06e-32 121
Msa0478500 MtrunA17_Chr4g0051471 36.994 173 91 2 2 156 345 517 1.01e-31 120
Msa0478500 MtrunA17_Chr8g0364841 34.921 189 105 2 1 171 492 680 1.47e-31 120
Msa0478500 MtrunA17_Chr4g0004081 33.862 189 107 2 2 172 488 676 1.64e-31 120
Msa0478500 MtrunA17_Chr4g0052381 37.572 173 90 2 2 156 396 568 2.10e-31 120
Msa0478500 MtrunA17_Chr2g0303841 38.750 160 79 3 2 143 440 598 2.26e-31 120
Msa0478500 MtrunA17_Chr8g0386861 40.426 188 93 3 2 171 639 825 2.55e-31 120
Msa0478500 MtrunA17_Chr1g0185091 35.263 190 105 2 2 173 655 844 3.16e-31 119
Msa0478500 MtrunA17_Chr4g0001441 37.306 193 102 3 2 175 393 585 3.21e-31 119
Msa0478500 MtrunA17_Chr8g0366421 37.037 189 101 2 2 172 673 861 3.24e-31 119
Msa0478500 MtrunA17_Chr1g0181931 34.921 189 105 2 1 171 477 665 3.32e-31 119
Msa0478500 MtrunA17_Chr1g0211821 34.595 185 102 3 2 168 333 516 3.38e-31 119
Msa0478500 MtrunA17_Chr3g0081091 33.971 209 118 4 2 191 523 730 3.81e-31 119
Msa0478500 MtrunA17_Chr3g0136451 32.984 191 110 2 2 174 686 876 4.66e-31 119
Msa0478500 MtrunA17_Chr1g0166001 30.841 214 126 3 2 197 566 775 4.96e-31 119
Msa0478500 MtrunA17_Chr3g0081081 31.308 214 128 3 2 197 506 718 6.43e-31 119
Msa0478500 MtrunA17_Chr2g0284331 40.000 160 78 2 2 143 372 531 6.74e-31 118
Msa0478500 MtrunA17_Chr5g0418441 37.791 172 89 3 2 155 591 762 8.45e-31 118
Msa0478500 MtrunA17_Chr8g0367121 35.260 173 94 2 2 156 444 616 8.84e-31 118
Msa0478500 MtrunA17_Chr8g0391951 34.946 186 102 2 2 168 413 598 1.19e-30 118
Msa0478500 MtrunA17_Chr6g0476351 34.862 218 116 6 2 197 329 542 1.22e-30 117
Msa0478500 MtrunA17_Chr1g0193831 34.921 189 104 2 2 171 525 713 1.45e-30 117
Msa0478500 MtrunA17_Chr7g0266871 40.127 157 76 2 2 140 395 551 1.72e-30 117
Msa0478500 MtrunA17_Chr7g0234661 38.994 159 79 2 2 142 723 881 1.73e-30 117
Msa0478500 MtrunA17_Chr7g0246841 32.710 214 122 3 2 197 486 695 1.75e-30 117
Msa0478500 MtrunA17_Chr3g0121921 34.043 188 106 2 2 171 329 516 2.70e-30 117
Msa0478500 MtrunA17_Chr4g0052361 35.838 173 93 2 2 156 379 551 3.59e-30 116
Msa0478500 MtrunA17_Chr2g0296821 35.052 194 102 3 2 171 598 791 4.04e-30 116
Msa0478500 MtrunA17_Chr3g0078291 34.409 186 95 3 5 171 294 471 4.06e-30 115
Msa0478500 MtrunA17_Chr7g0228601 34.272 213 118 3 2 196 665 873 4.29e-30 116
Msa0478500 MtrunA17_Chr4g0051151 36.875 160 83 2 2 143 490 649 4.44e-30 116
Msa0478500 MtrunA17_Chr8g0379211 35.638 188 103 2 2 171 582 769 5.02e-30 116
Msa0478500 MtrunA17_Chr3g0081591 31.915 188 110 2 2 171 410 597 5.24e-30 116
Msa0478500 MtrunA17_Chr1g0186051 36.170 188 102 3 2 171 425 612 5.62e-30 115
Msa0478500 MtrunA17_Chr7g0252091 32.812 192 110 2 2 174 570 761 5.84e-30 116
Msa0478500 MtrunA17_Chr3g0093831 36.782 174 90 4 2 156 624 796 7.32e-30 115
Msa0478500 MtrunA17_Chr7g0245241 35.465 172 92 3 2 155 420 590 7.72e-30 115
Msa0478500 MtrunA17_Chr4g0040441 37.500 160 83 2 2 144 310 469 7.74e-30 114
Msa0478500 MtrunA17_Chr1g0192601 37.888 161 82 2 1 143 325 485 8.95e-30 114
Msa0478500 MtrunA17_Chr5g0428021 36.994 173 91 2 2 156 481 653 9.93e-30 115
Msa0478500 MtrunA17_Chr3g0079111 38.922 167 77 2 2 143 305 471 9.94e-30 114
Msa0478500 MtrunA17_Chr3g0144951 35.057 174 93 2 2 155 282 455 1.27e-29 114
Msa0478500 MtrunA17_Chr8g0371731 36.875 160 83 2 2 143 514 673 1.34e-29 115
Msa0478500 MtrunA17_Chr5g0407181 38.272 162 81 3 2 144 402 563 1.47e-29 114
Msa0478500 MtrunA17_Chr8g0348641 33.333 186 106 2 4 171 458 643 1.57e-29 114
Msa0478500 MtrunA17_Chr5g0445141 35.625 160 83 4 2 142 601 759 1.60e-29 115
Msa0478500 MtrunA17_Chr5g0396241 34.043 188 106 2 2 171 516 703 1.72e-29 114
Msa0478500 MtrunA17_Chr7g0272891 35.263 190 105 2 2 173 446 635 2.20e-29 114
Msa0478500 MtrunA17_Chr8g0347201 30.233 215 120 4 5 197 653 859 2.40e-29 114
Msa0478500 MtrunA17_Chr7g0220551 34.973 183 101 2 2 166 659 841 3.02e-29 114
Msa0478500 MtrunA17_Chr3g0109081 38.411 151 74 2 2 133 394 544 3.08e-29 113
Msa0478500 MtrunA17_Chr4g0045161 37.059 170 89 2 2 153 696 865 3.17e-29 114
Msa0478500 MtrunA17_Chr4g0020001 34.574 188 104 3 2 171 286 472 5.00e-29 113
Msa0478500 MtrunA17_Chr8g0381801 34.225 187 105 5 2 171 415 600 5.62e-29 113
Msa0478500 MtrunA17_Chr4g0067001 35.429 175 93 2 1 155 310 484 6.95e-29 112
Msa0478500 MtrunA17_Chr4g0042871 35.802 162 86 2 2 145 528 689 7.15e-29 113
Msa0478500 MtrunA17_Chr5g0394691 35.838 173 93 2 2 156 551 723 8.28e-29 112
Msa0478500 MtrunA17_Chr5g0446451 33.645 214 120 3 2 197 522 731 8.46e-29 112
Msa0478500 MtrunA17_Chr4g0034341 34.054 185 103 3 2 168 481 664 9.38e-29 112
Msa0478500 MtrunA17_Chr4g0051901 32.447 188 109 2 2 171 428 615 1.08e-28 112
Msa0478500 MtrunA17_Chr2g0298181 31.579 190 110 3 2 171 405 594 1.13e-28 112
Msa0478500 MtrunA17_Chr7g0266961 38.854 157 78 2 2 140 395 551 1.40e-28 111
Msa0478500 MtrunA17_Chr8g0390071 37.580 157 80 2 2 140 285 441 1.40e-28 110
Msa0478500 MtrunA17_Chr2g0283441 36.842 152 76 3 2 133 360 511 1.73e-28 111
Msa0478500 MtrunA17_Chr6g0476471 35.377 212 109 8 8 197 2 207 1.82e-28 107
Msa0478500 MtrunA17_Chr4g0044381 34.302 172 95 2 2 155 527 698 2.35e-28 111
Msa0478500 MtrunA17_Chr2g0291271 37.195 164 80 3 2 142 340 503 2.65e-28 110
Msa0478500 MtrunA17_Chr6g0488851 38.182 165 81 2 2 145 422 586 4.00e-28 110
Msa0478500 MtrunA17_Chr1g0165931 30.890 191 114 2 2 174 342 532 4.07e-28 110
Msa0478500 MtrunA17_Chr8g0381811 33.333 168 94 2 6 155 389 556 4.63e-28 110
Msa0478500 MtrunA17_Chr1g0149951 33.333 189 107 2 2 171 494 682 4.64e-28 110
Msa0478500 MtrunA17_Chr2g0319231 33.149 181 103 2 2 164 42 222 4.71e-28 105
Msa0478500 MtrunA17_Chr6g0453621 31.696 224 125 7 1 198 341 562 5.54e-28 110
Msa0478500 MtrunA17_Chr5g0443321 34.759 187 103 3 2 169 348 534 7.77e-28 109
Msa0478500 MtrunA17_Chr8g0376511 35.366 164 84 3 2 146 297 457 1.49e-27 108
Msa0478500 MtrunA17_Chr8g0380361 32.461 191 111 2 2 174 413 603 1.94e-27 108
Msa0478500 MtrunA17_Chr2g0288971 34.503 171 94 2 2 154 555 725 2.02e-27 108
Msa0478500 MtrunA17_Chr5g0396341 32.500 160 90 2 2 143 604 763 2.54e-27 108
Msa0478500 MtrunA17_Chr2g0282141 34.177 158 87 2 3 143 346 503 2.99e-27 107
Msa0478500 MtrunA17_Chr1g0192971 34.043 188 106 2 2 171 362 549 3.16e-27 108
Msa0478500 MtrunA17_Chr7g0214431 35.882 170 90 3 2 153 403 571 3.59e-27 107
Msa0478500 MtrunA17_Chr5g0408161 36.646 161 84 2 2 144 724 884 3.85e-27 108
Msa0478500 MtrunA17_Chr2g0321911 35.638 188 87 3 2 171 308 479 4.29e-27 107
Msa0478500 MtrunA17_Chr1g0202451 32.979 188 106 3 2 171 606 791 4.66e-27 107
Msa0478500 MtrunA17_Chr6g0476401 35.676 185 90 5 2 168 54 227 4.81e-27 104
Msa0478500 MtrunA17_Chr1g0173941 36.025 161 82 4 2 142 580 739 8.13e-27 107
Msa0478500 MtrunA17_Chr4g0031971 36.025 161 84 3 2 143 388 548 8.78e-27 106
Msa0478500 MtrunA17_Chr3g0081041 34.054 185 104 3 2 168 377 561 9.47e-27 107
Msa0478500 MtrunA17_Chr1g0165911 31.122 196 104 3 2 179 364 546 1.38e-26 106
Msa0478500 MtrunA17_Chr7g0248271 35.000 160 81 4 2 143 418 572 3.60e-26 105
Msa0478500 MtrunA17_Chr1g0164941 33.333 213 119 4 2 196 417 624 3.97e-26 105
Msa0478500 MtrunA17_Chr7g0248291 35.625 160 80 4 2 143 489 643 4.06e-26 105
Msa0478500 MtrunA17_Chr8g0385541 35.583 163 86 4 3 146 331 493 4.83e-26 104
Msa0478500 MtrunA17_Chr1g0166301 33.974 156 85 2 3 140 527 682 5.92e-26 104
Msa0478500 MtrunA17_Chr5g0418811 35.227 176 90 4 2 153 297 472 6.69e-26 103
Msa0478500 MtrunA17_Chr2g0303911 32.447 188 108 3 3 171 507 694 7.57e-26 104
Msa0478500 MtrunA17_Chr2g0308771 37.107 159 82 2 2 142 275 433 8.37e-26 103
Msa0478500 MtrunA17_Chr5g0406941 35.915 142 76 2 2 128 598 739 1.28e-25 103
Msa0478500 MtrunA17_Chr8g0351541 33.854 192 105 4 3 172 574 765 3.10e-25 102
Msa0478500 MtrunA17_Chr2g0313271 33.333 174 96 4 2 156 505 677 3.22e-25 102
Msa0478500 MtrunA17_Chr7g0269041 34.132 167 91 3 2 149 308 474 9.63e-25 100
Msa0478500 MtrunA17_Chr7g0270241 36.250 160 83 3 2 143 403 561 9.80e-25 100
Msa0478500 MtrunA17_Chr3g0114971 34.783 161 86 3 2 144 528 687 2.57e-24 99.8
Msa0478500 MtrunA17_Chr8g0371191 29.500 200 119 4 2 180 308 506 3.49e-24 99.4
Msa0478500 MtrunA17_Chr7g0247091 35.366 164 88 2 2 147 394 557 3.69e-24 99.4
Msa0478500 MtrunA17_Chr5g0396021 30.952 168 95 3 2 151 484 648 4.45e-24 99.4
Msa0478500 MtrunA17_Chr7g0251271 33.333 159 88 2 2 142 401 559 5.08e-24 99.0
Msa0478500 MtrunA17_Chr5g0412041 32.877 146 81 2 2 130 328 473 5.42e-24 99.0
Msa0478500 MtrunA17_Chr4g0060311 34.337 166 88 3 3 147 375 540 5.58e-24 98.6
Msa0478500 MtrunA17_Chr2g0329731 34.591 159 85 3 2 141 57 215 5.64e-24 94.7
Msa0478500 MtrunA17_Chr1g0164381 35.333 150 79 2 2 133 413 562 7.67e-24 98.6
Msa0478500 MtrunA17_Chr4g0037911 34.337 166 88 3 3 147 373 538 8.69e-24 98.2
Msa0478500 MtrunA17_Chr5g0402921 32.759 174 97 3 2 156 503 675 1.20e-23 98.2
Msa0478500 MtrunA17_Chr3g0087311 30.000 160 94 2 1 142 687 846 1.47e-23 97.8
Msa0478500 MtrunA17_Chr3g0091731 36.646 161 80 4 2 144 263 419 1.89e-23 96.7
Msa0478500 MtrunA17_Chr3g0091701 36.301 146 74 3 2 129 96 240 2.05e-23 94.0
Msa0478500 MtrunA17_Chr2g0313451 30.000 190 115 2 2 173 429 618 3.05e-23 96.7
Msa0478500 MtrunA17_Chr3g0119391 35.625 160 85 2 2 143 326 485 3.22e-23 96.3
Msa0478500 MtrunA17_Chr4g0066641 32.086 187 107 2 2 168 421 607 3.65e-23 96.7
Msa0478500 MtrunA17_Chr3g0145381 29.091 165 94 2 3 144 304 468 6.49e-23 95.5
Msa0478500 MtrunA17_Chr6g0477951 33.129 163 86 4 2 143 450 610 3.05e-22 94.0
Msa0478500 MtrunA17_Chr2g0285911 38.136 118 65 2 2 113 397 512 3.28e-22 93.6
Msa0478500 MtrunA17_Chr8g0374211 34.591 159 85 3 2 141 334 492 3.37e-22 93.6
Msa0478500 MtrunA17_Chr8g0375731 32.086 187 109 2 3 171 338 524 4.11e-22 93.6
Msa0478500 MtrunA17_Chr7g0265441 29.412 187 112 3 2 168 586 772 5.42e-22 93.2
Msa0478500 MtrunA17_Chr5g0416111 33.750 160 88 3 2 144 461 619 5.74e-22 93.2
Msa0478500 MtrunA17_Chr4g0066861 33.540 161 88 3 2 144 438 597 7.53e-22 92.8
Msa0478500 MtrunA17_Chr4g0044101 40.000 115 51 2 44 140 1 115 1.11e-21 85.9
Msa0478500 MtrunA17_Chr2g0279761 32.500 160 90 2 2 143 460 619 1.56e-21 92.0
Msa0478500 MtrunA17_Chr7g0220281 34.266 143 76 2 33 157 360 502 1.99e-21 91.7
Msa0478500 MtrunA17_Chr7g0227121 38.750 160 79 3 2 142 325 484 2.30e-21 91.3
Msa0478500 MtrunA17_Chr3g0125601 28.042 189 118 2 1 171 401 589 2.70e-20 88.2
Msa0478500 MtrunA17_Chr5g0405901 29.697 165 93 2 16 157 388 552 2.79e-20 88.2
Msa0478500 MtrunA17_Chr4g0010831 32.044 181 83 5 2 142 230 410 2.81e-20 87.8
Msa0478500 MtrunA17_Chr6g0457741 32.298 161 89 3 3 144 364 523 1.45e-19 86.3
Msa0478500 MtrunA17_Chr4g0037471 27.225 191 121 2 2 174 396 586 5.73e-19 84.3
Msa0478500 MtrunA17_Chr5g0399291 31.928 166 91 5 2 146 355 519 6.13e-19 84.3
Msa0478500 MtrunA17_Chr3g0125591 47.368 76 40 0 2 77 95 170 1.51e-18 79.3
Msa0478500 MtrunA17_Chr2g0321861 40.541 111 54 1 70 168 103 213 2.53e-18 80.1
Msa0478500 MtrunA17_Chr5g0430251 28.571 189 110 3 2 172 611 792 2.83e-18 82.4
Msa0478500 MtrunA17_Chr4g0044021 46.269 67 36 0 2 68 13 79 4.08e-18 75.5
Msa0478500 MtrunA17_Chr3g0125871 31.613 155 86 3 3 138 364 517 2.32e-17 79.7
Msa0478500 MtrunA17_Chr7g0271111 30.625 160 90 3 2 141 253 411 2.52e-17 79.3
Msa0478500 MtrunA17_Chr4g0010851 35.052 97 56 1 9 98 1 97 5.69e-17 74.3
Msa0478500 MtrunA17_Chr8g0365911 28.834 163 98 2 2 146 495 657 8.88e-17 78.2
Msa0478500 MtrunA17_Chr5g0447551 49.206 63 32 0 2 64 721 783 1.03e-16 77.8
Msa0478500 MtrunA17_Chr2g0321901 32.407 108 67 1 3 104 195 302 2.69e-16 75.9
Msa0478500 MtrunA17_Chr3g0117111 32.500 160 85 3 2 138 391 550 5.90e-16 75.5
Msa0478500 MtrunA17_Chr2g0321851 31.481 108 68 1 3 104 195 302 9.33e-16 74.3
Msa0478500 MtrunA17_Chr8g0337021 31.481 108 68 1 3 104 195 302 9.90e-16 74.3
Msa0478500 MtrunA17_Chr3g0078691 47.143 70 31 1 44 107 1 70 1.16e-14 67.0
Msa0478500 MtrunA17_Chr5g0418021 33.333 111 68 1 2 106 324 434 4.87e-14 70.1
Msa0478500 MtrunA17_Chr7g0268011 39.326 89 48 1 2 84 197 285 4.98e-14 69.3
Msa0478500 MtrunA17_Chr1g0166031 33.333 111 68 1 2 106 79 189 7.29e-14 69.3
Msa0478500 MtrunA17_Chr2g0287621 31.250 112 71 1 2 107 184 295 1.55e-13 68.6
Msa0478500 MtrunA17_Chr3g0125571 34.234 111 67 1 2 106 597 707 2.21e-13 68.2
Msa0478500 MtrunA17_Chr7g0260141 50.746 67 32 1 2 67 44 110 1.76e-12 62.0
Msa0478500 MtrunA17_Chr7g0252681 39.189 74 45 0 3 76 337 410 2.61e-12 65.1
Msa0478500 MtrunA17_Chr6g0455591 32.979 94 57 1 2 89 623 716 1.73e-11 62.8
Msa0478500 MtrunA17_Chr2g0312221 42.029 69 40 0 5 73 204 272 2.83e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0478500 AT4G37380.1 37.037 216 113 4 2 198 344 555 1.32e-41 149
Msa0478500 AT1G08070.2 37.766 188 99 2 2 171 350 537 1.05e-40 146
Msa0478500 AT1G08070.1 37.766 188 99 2 2 171 454 641 1.65e-40 146
Msa0478500 AT1G33350.2 38.743 191 96 4 2 171 345 535 9.96e-40 142
Msa0478500 AT1G33350.1 38.743 191 96 4 2 171 345 535 9.96e-40 142
Msa0478500 AT2G20540.2 34.389 221 115 3 2 204 296 504 1.94e-39 141
Msa0478500 AT4G14820.1 39.594 197 100 3 2 179 429 625 2.26e-39 143
Msa0478500 AT5G66520.1 40.462 173 85 2 2 156 332 504 2.98e-39 142
Msa0478500 AT2G20540.1 34.389 221 115 3 2 204 326 534 3.42e-39 141
Msa0478500 AT1G15510.1 35.185 216 108 5 1 191 581 789 4.02e-39 142
Msa0478500 AT4G33990.2 38.220 191 100 2 2 174 529 719 7.48e-39 142
Msa0478500 AT4G33990.1 38.220 191 100 2 2 174 536 726 8.47e-39 142
Msa0478500 AT5G56310.1 38.830 188 97 2 2 171 335 522 1.26e-38 139
Msa0478500 AT3G29230.1 38.298 188 98 2 2 171 400 587 2.55e-38 139
Msa0478500 AT1G50270.1 39.474 190 96 3 2 172 391 580 4.01e-38 139
Msa0478500 AT3G26782.1 36.449 214 114 3 2 197 372 581 4.26e-38 139
Msa0478500 AT5G48910.1 39.086 197 101 3 2 179 359 555 5.70e-38 139
Msa0478500 AT2G45350.1 39.766 171 85 2 2 154 435 605 1.24e-37 137
Msa0478500 AT3G49170.1 39.037 187 96 2 3 171 560 746 1.44e-37 138
Msa0478500 AT4G21065.2 36.744 215 113 4 2 197 174 384 1.44e-37 135
Msa0478500 AT3G53360.1 39.378 193 99 2 2 176 558 750 1.96e-37 137
Msa0478500 AT3G53360.2 39.378 193 99 2 2 176 558 750 1.96e-37 137
Msa0478500 AT3G49142.1 37.173 191 102 2 2 174 394 584 2.45e-37 137
Msa0478500 AT3G47530.1 38.542 192 99 3 2 174 302 493 2.74e-37 136
Msa0478500 AT5G59200.1 37.895 190 100 2 2 173 340 529 3.50e-37 135
Msa0478500 AT4G21065.1 36.744 215 113 4 2 197 307 517 5.48e-37 135
Msa0478500 AT2G01510.1 38.605 215 108 4 2 196 295 505 1.21e-36 134
Msa0478500 AT2G01510.2 38.605 215 108 4 2 196 295 505 1.21e-36 134
Msa0478500 AT5G13270.1 40.000 185 93 2 2 168 472 656 1.25e-36 135
Msa0478500 AT2G29760.1 38.743 191 99 2 2 174 450 640 1.52e-36 135
Msa0478500 AT5G15300.1 39.877 163 80 2 2 146 364 526 3.28e-36 133
Msa0478500 AT4G02750.1 36.508 189 102 2 1 171 493 681 3.83e-36 134
Msa0478500 AT1G71490.1 35.349 215 119 3 1 195 466 680 5.41e-36 133
Msa0478500 AT1G25360.1 37.696 191 101 2 2 174 502 692 5.54e-36 134
Msa0478500 AT3G47840.1 37.838 185 97 2 2 168 496 680 1.19e-35 132
Msa0478500 AT3G22150.2 38.860 193 97 2 2 173 606 798 1.33e-35 132
Msa0478500 AT3G22150.1 38.860 193 97 2 2 173 606 798 1.33e-35 132
Msa0478500 AT5G08305.1 39.153 189 96 3 2 172 328 515 2.66e-35 130
Msa0478500 AT1G05750.1 41.398 186 90 3 2 168 291 476 2.84e-35 130
Msa0478500 AT1G05750.2 41.398 186 90 3 2 168 291 476 2.84e-35 130
Msa0478500 AT4G21300.1 37.879 198 103 4 2 179 627 824 3.34e-35 131
Msa0478500 AT5G08510.1 36.458 192 103 3 2 174 301 492 3.38e-35 130
Msa0478500 AT1G18485.1 36.000 175 93 2 2 157 682 856 4.37e-35 131
Msa0478500 AT2G22410.1 35.789 190 104 2 2 173 474 663 8.37e-35 130
Msa0478500 AT2G02980.1 35.638 188 103 2 5 174 318 505 1.11e-34 129
Msa0478500 AT4G18750.1 40.116 172 85 2 2 155 584 755 2.57e-34 129
Msa0478500 AT3G56550.2 32.642 193 112 2 2 176 293 485 3.15e-34 128
Msa0478500 AT3G56550.1 32.642 193 112 2 2 176 293 485 3.15e-34 128
Msa0478500 AT5G39680.1 34.404 218 113 4 2 197 423 632 3.42e-34 128
Msa0478500 AT5G50990.1 34.597 211 119 3 2 197 250 456 3.43e-34 127
Msa0478500 AT2G13600.1 37.766 188 99 2 2 171 477 664 3.82e-34 128
Msa0478500 AT2G37320.1 39.247 186 93 4 2 168 306 490 5.50e-34 126
Msa0478500 AT3G08820.1 32.558 215 123 3 1 197 397 607 6.11e-34 127
Msa0478500 AT4G01030.1 35.393 178 97 2 6 165 485 662 9.30e-34 127
Msa0478500 AT4G14850.1 36.126 191 102 3 1 171 394 584 1.31e-33 127
Msa0478500 AT2G03380.1 42.500 160 74 2 2 143 530 689 1.36e-33 127
Msa0478500 AT5G40410.1 35.648 216 117 4 2 198 320 532 1.37e-33 126
Msa0478500 AT2G22070.1 33.632 223 126 3 2 206 499 717 1.93e-33 126
Msa0478500 AT1G68930.2 31.818 220 128 3 3 204 431 646 2.22e-33 126
Msa0478500 AT1G68930.1 31.818 220 128 3 3 204 457 672 2.37e-33 126
Msa0478500 AT3G09040.2 36.994 173 91 2 2 156 843 1015 3.77e-33 125
Msa0478500 AT3G09040.3 36.994 173 91 2 2 156 843 1015 3.77e-33 125
Msa0478500 AT4G13650.1 34.896 192 107 2 2 175 777 968 4.28e-33 125
Msa0478500 AT3G09040.1 36.994 173 91 2 2 156 818 990 4.30e-33 125
Msa0478500 AT3G09040.4 36.994 173 91 2 2 156 818 990 4.30e-33 125
Msa0478500 AT5G04780.1 37.576 165 85 2 5 151 351 515 4.56e-33 125
Msa0478500 AT2G27610.1 34.579 214 118 3 2 197 580 789 4.67e-33 125
Msa0478500 AT3G15930.1 33.333 192 110 2 2 175 453 644 4.81e-33 125
Msa0478500 AT3G46790.1 34.211 190 107 2 2 173 370 559 5.23e-33 125
Msa0478500 AT2G37310.1 35.106 188 104 2 2 171 451 638 5.60e-33 125
Msa0478500 AT1G69350.1 34.043 188 105 3 2 171 589 775 5.86e-33 125
Msa0478500 AT1G59720.1 35.385 195 98 4 2 168 339 533 6.31e-33 124
Msa0478500 AT3G62890.1 37.853 177 92 2 16 174 300 476 7.36e-33 124
Msa0478500 AT1G74400.1 38.144 194 90 5 2 168 254 444 1.30e-32 122
Msa0478500 AT1G06143.1 37.056 197 98 4 2 172 372 568 1.44e-32 123
Msa0478500 AT3G57430.1 37.572 173 89 2 2 155 602 774 1.45e-32 124
Msa0478500 AT3G24000.1 39.227 181 91 3 2 164 347 526 1.66e-32 123
Msa0478500 AT5G40405.2 38.953 172 87 2 3 156 326 497 1.73e-32 123
Msa0478500 AT5G40405.1 38.953 172 87 2 3 156 326 497 1.73e-32 123
Msa0478500 AT5G06540.1 34.259 216 117 5 2 197 334 544 2.77e-32 122
Msa0478500 AT2G03880.1 36.628 172 91 2 2 155 343 514 2.79e-32 122
Msa0478500 AT3G63370.1 35.602 191 105 2 2 174 672 862 2.89e-32 123
Msa0478500 AT4G39530.1 37.234 188 99 3 2 171 640 826 3.12e-32 123
Msa0478500 AT3G63370.2 35.602 191 105 2 2 174 672 862 3.26e-32 123
Msa0478500 AT1G74600.1 41.509 159 75 2 2 142 737 895 5.04e-32 122
Msa0478500 AT3G03580.1 36.170 188 102 2 2 171 594 781 6.03e-32 122
Msa0478500 AT3G23330.1 36.416 173 92 2 2 156 428 600 6.30e-32 122
Msa0478500 AT4G33170.1 36.264 182 98 2 3 166 704 885 6.59e-32 122
Msa0478500 AT3G22690.1 36.994 173 91 2 2 156 555 727 7.26e-32 122
Msa0478500 AT3G11460.1 32.804 189 109 2 1 171 341 529 7.41e-32 121
Msa0478500 AT3G05340.1 35.638 188 103 2 2 171 442 629 7.42e-32 122
Msa0478500 AT3G23330.2 36.416 173 92 2 2 156 319 491 7.54e-32 121
Msa0478500 AT3G22690.2 36.994 173 91 2 2 156 555 727 7.59e-32 122
Msa0478500 AT4G19191.1 36.310 168 89 2 2 151 443 610 8.59e-32 121
Msa0478500 AT5G44230.2 33.028 218 122 5 2 199 271 484 1.14e-31 120
Msa0478500 AT1G74630.1 36.416 173 92 2 2 156 355 527 1.19e-31 121
Msa0478500 AT3G01580.1 35.979 189 102 3 2 171 451 639 1.36e-31 121
Msa0478500 AT1G74630.2 36.416 173 92 2 2 156 370 542 1.40e-31 120
Msa0478500 AT5G44230.1 33.028 218 122 5 2 199 368 581 1.41e-31 120
Msa0478500 AT5G09950.2 38.660 194 98 4 2 174 698 891 1.68e-31 121
Msa0478500 AT5G09950.3 38.660 194 98 4 2 174 704 897 1.81e-31 120
Msa0478500 AT5G09950.1 38.660 194 98 4 2 174 704 897 1.81e-31 120
Msa0478500 AT1G31920.1 33.511 188 107 2 2 171 319 506 2.29e-31 120
Msa0478500 AT5G27110.1 33.684 190 107 2 2 172 495 684 2.47e-31 120
Msa0478500 AT2G41080.1 38.095 189 98 3 2 171 362 550 2.72e-31 120
Msa0478500 AT2G33760.1 35.417 192 102 3 2 171 293 484 3.59e-31 119
Msa0478500 AT3G02010.1 31.746 189 110 2 2 171 537 725 3.85e-31 120
Msa0478500 AT2G42920.2 37.766 188 99 2 2 171 343 530 4.48e-31 119
Msa0478500 AT2G42920.1 37.766 188 99 2 2 171 343 530 4.48e-31 119
Msa0478500 AT4G16470.1 37.363 182 96 2 3 166 295 476 4.93e-31 118
Msa0478500 AT1G77170.1 38.608 158 79 2 2 141 305 462 7.55e-31 117
Msa0478500 AT5G52630.1 36.842 190 101 4 3 174 303 491 8.75e-31 118
Msa0478500 AT5G16860.1 34.595 185 103 2 2 168 563 747 1.06e-30 118
Msa0478500 AT4G16835.1 37.572 173 90 2 2 156 369 541 1.72e-30 117
Msa0478500 AT3G14330.1 32.418 182 105 2 3 166 423 604 2.56e-30 117
Msa0478500 AT1G09410.1 36.095 169 89 3 2 151 416 584 3.00e-30 117
Msa0478500 AT4G39952.1 36.478 159 82 3 2 142 618 775 3.60e-30 117
Msa0478500 AT3G12770.1 36.416 173 91 3 2 156 408 579 5.19e-30 116
Msa0478500 AT3G49710.1 34.031 191 108 2 2 174 431 621 5.92e-30 116
Msa0478500 AT4G30700.1 34.518 197 110 3 2 179 505 701 7.91e-30 116
Msa0478500 AT3G25970.1 33.333 192 110 2 1 174 493 684 8.40e-30 116
Msa0478500 AT1G28690.1 34.969 163 87 2 2 145 358 520 2.16e-29 114
Msa0478500 AT1G11290.1 35.638 188 103 2 2 171 523 710 2.73e-29 114
Msa0478500 AT3G14730.1 33.333 174 98 2 1 156 451 624 3.01e-29 114
Msa0478500 AT1G56570.1 33.862 189 106 3 2 171 399 587 3.32e-29 114
Msa0478500 AT1G56570.2 33.862 189 106 3 2 171 399 587 3.32e-29 114
Msa0478500 AT1G31430.2 34.857 175 93 2 2 155 364 538 4.27e-29 113
Msa0478500 AT1G31430.1 34.857 175 93 2 2 155 364 538 4.27e-29 113
Msa0478500 AT1G56690.1 34.524 168 92 2 2 151 416 583 5.23e-29 114
Msa0478500 AT1G34160.2 34.574 188 104 3 2 171 245 431 6.43e-29 113
Msa0478500 AT3G05240.1 37.267 161 82 3 2 143 402 562 8.09e-29 112
Msa0478500 AT1G09190.1 37.500 160 81 3 2 142 320 479 1.01e-28 112
Msa0478500 AT1G34160.1 34.574 188 104 3 2 171 292 478 1.09e-28 112
Msa0478500 AT5G46460.1 33.023 215 119 5 2 197 411 619 1.23e-28 112
Msa0478500 AT3G04750.1 34.737 190 104 3 2 171 453 642 1.33e-28 112
Msa0478500 AT3G13770.1 35.057 174 93 4 3 156 340 513 1.40e-28 112
Msa0478500 AT4G37170.1 33.178 214 121 3 2 197 404 613 1.44e-28 112
Msa0478500 AT1G13410.1 32.447 188 109 2 2 171 274 461 1.69e-28 111
Msa0478500 AT5G37570.1 37.107 159 82 2 2 142 390 548 2.14e-28 111
Msa0478500 AT5G37570.2 37.107 159 82 2 2 142 390 548 2.14e-28 111
Msa0478500 AT3G15130.1 31.414 191 113 2 2 174 398 588 2.85e-28 111
Msa0478500 AT4G32430.2 33.679 193 105 3 3 172 428 620 3.01e-28 111
Msa0478500 AT4G32430.1 33.679 193 105 3 3 172 560 752 3.04e-28 111
Msa0478500 AT3G28640.1 33.898 177 94 3 2 155 304 480 3.34e-28 110
Msa0478500 AT1G77010.1 35.000 160 86 2 2 143 535 694 3.45e-28 111
Msa0478500 AT4G14050.2 32.275 189 109 2 2 171 270 458 4.93e-28 110
Msa0478500 AT3G16610.1 34.783 161 87 3 2 144 494 654 5.21e-28 110
Msa0478500 AT5G39350.1 36.646 161 84 2 2 144 509 669 5.72e-28 110
Msa0478500 AT5G50390.1 31.250 192 110 3 2 171 410 601 5.83e-28 110
Msa0478500 AT2G40720.1 32.979 188 108 2 2 171 662 849 6.49e-28 110
Msa0478500 AT4G14050.1 32.275 189 109 2 2 171 323 511 7.17e-28 110
Msa0478500 AT5G42450.2 33.663 202 111 5 2 181 230 430 7.97e-28 108
Msa0478500 AT2G04860.1 37.584 149 75 2 2 132 534 682 8.52e-28 110
Msa0478500 AT5G42450.1 33.663 202 111 5 2 181 314 514 1.27e-27 109
Msa0478500 AT4G38010.1 37.278 169 86 4 2 150 391 559 1.37e-27 109
Msa0478500 AT1G16480.1 33.333 186 106 2 6 173 654 839 1.60e-27 109
Msa0478500 AT1G16480.2 33.333 186 106 2 6 173 637 822 1.67e-27 109
Msa0478500 AT2G21090.1 32.984 191 108 3 2 172 397 587 2.61e-27 108
Msa0478500 AT4G15720.1 36.269 193 103 3 2 174 321 513 2.84e-27 108
Msa0478500 AT2G36980.3 32.292 192 108 2 2 171 270 461 3.02e-27 107
Msa0478500 AT2G36980.1 32.292 192 108 2 2 171 422 613 3.54e-27 108
Msa0478500 AT2G36980.2 32.292 192 108 2 2 171 413 604 3.55e-27 108
Msa0478500 AT4G35130.1 32.323 198 112 3 5 180 519 716 4.38e-27 108
Msa0478500 AT5G65570.1 33.796 216 120 6 2 199 453 663 6.48e-27 107
Msa0478500 AT3G13880.1 32.512 203 119 2 2 186 544 746 7.23e-27 107
Msa0478500 AT3G25060.1 32.749 171 97 2 3 155 403 573 1.04e-26 107
Msa0478500 AT1G06140.1 36.025 161 85 2 2 144 397 557 1.34e-26 106
Msa0478500 AT1G20230.1 30.000 190 115 2 3 174 474 663 1.54e-26 106
Msa0478500 AT3G02330.1 34.409 186 103 3 2 168 688 873 2.51e-26 106
Msa0478500 AT3G18840.3 30.769 195 115 3 2 177 478 671 2.53e-26 106
Msa0478500 AT3G18840.2 30.769 195 115 3 2 177 478 671 2.53e-26 106
Msa0478500 AT2G33680.6 35.465 172 93 2 2 155 563 734 2.70e-26 105
Msa0478500 AT2G33680.3 35.465 172 93 2 2 155 572 743 2.79e-26 105
Msa0478500 AT2G33680.2 35.465 172 93 2 2 155 572 743 2.79e-26 105
Msa0478500 AT2G33680.4 35.465 172 93 2 2 155 572 743 2.79e-26 105
Msa0478500 AT2G33680.1 35.465 172 93 2 2 155 508 679 2.84e-26 105
Msa0478500 AT2G33680.8 35.465 172 93 2 2 155 508 679 2.84e-26 105
Msa0478500 AT2G33680.7 35.465 172 93 2 2 155 508 679 2.84e-26 105
Msa0478500 AT2G33680.5 35.465 172 93 2 2 155 583 754 2.99e-26 105
Msa0478500 AT3G18970.1 34.356 163 82 2 5 142 310 472 6.17e-26 104
Msa0478500 AT4G14170.2 35.000 160 85 3 1 142 220 378 7.24e-26 103
Msa0478500 AT5G08490.8 30.319 188 113 2 2 171 652 839 7.85e-26 104
Msa0478500 AT5G08490.3 30.319 188 113 2 2 171 652 839 7.85e-26 104
Msa0478500 AT5G08490.1 30.319 188 113 2 2 171 652 839 7.85e-26 104
Msa0478500 AT4G18840.1 36.000 150 78 2 2 133 389 538 8.31e-26 104
Msa0478500 AT4G18840.3 36.000 150 78 2 2 133 389 538 8.31e-26 104
Msa0478500 AT4G18840.2 36.000 150 78 2 2 133 389 538 8.31e-26 104
Msa0478500 AT4G14170.1 35.000 160 85 3 1 142 319 477 1.03e-25 103
Msa0478500 AT2G17210.1 30.570 193 112 4 2 173 533 724 1.39e-25 103
Msa0478500 AT3G28660.1 32.727 165 89 2 13 155 316 480 1.45e-25 103
Msa0478500 AT2G36730.1 35.602 191 97 7 2 168 297 485 1.58e-25 103
Msa0478500 AT5G59600.1 38.406 138 67 2 2 121 373 510 1.79e-25 103
Msa0478500 AT1G22830.1 34.132 167 91 2 1 148 508 674 1.92e-25 103
Msa0478500 AT1G22830.2 34.132 167 91 2 1 148 508 674 1.92e-25 103
Msa0478500 AT1G17630.2 32.308 195 110 3 2 174 519 713 2.47e-25 103
Msa0478500 AT1G17630.1 32.308 195 110 3 2 174 519 713 2.47e-25 103
Msa0478500 AT5G66500.1 35.758 165 81 4 2 141 366 530 4.00e-25 102
Msa0478500 AT5G43790.1 36.242 149 77 2 3 133 302 450 1.60e-24 100
Msa0478500 AT1G10330.1 35.220 159 85 2 2 142 308 466 2.18e-24 100
Msa0478500 AT4G25270.1 32.000 150 83 2 3 133 376 525 3.31e-24 99.8
Msa0478500 AT2G34400.1 32.000 175 97 3 2 157 419 590 3.46e-24 99.8
Msa0478500 AT5G15340.1 29.508 183 109 4 1 165 335 515 6.36e-24 99.0
Msa0478500 AT1G03540.1 33.540 161 88 3 2 143 447 607 6.77e-24 99.0
Msa0478500 AT5G19020.1 35.762 151 79 2 1 133 525 675 1.10e-23 98.6
Msa0478500 AT1G09220.1 34.177 158 85 3 2 140 344 501 1.27e-23 97.8
Msa0478500 AT5G61800.1 33.129 163 86 3 1 140 333 495 1.44e-23 97.8
Msa0478500 AT1G26900.1 38.554 166 74 5 2 145 413 572 1.70e-23 97.8
Msa0478500 AT5G55740.1 32.105 190 109 3 2 171 632 821 1.94e-23 97.8
Msa0478500 AT2G44880.1 32.979 188 106 4 2 171 359 544 2.52e-23 97.4
Msa0478500 AT2G44880.2 32.979 188 106 4 2 171 402 587 3.10e-23 97.1
Msa0478500 AT2G44880.4 32.979 188 106 4 2 171 400 585 3.22e-23 97.1
Msa0478500 AT2G44880.3 32.979 188 106 4 2 171 400 585 3.22e-23 97.1
Msa0478500 AT2G44880.6 32.979 188 106 4 2 171 398 583 3.33e-23 97.1
Msa0478500 AT2G44880.5 32.979 188 106 4 2 171 399 584 3.37e-23 97.1
Msa0478500 AT4G08210.1 36.913 149 76 3 2 132 528 676 6.57e-23 96.3
Msa0478500 AT4G19220.1 30.864 162 93 3 2 144 783 944 7.04e-23 96.3
Msa0478500 AT3G13770.2 35.338 133 68 2 42 156 348 480 1.24e-22 95.5
Msa0478500 AT5G13230.1 32.143 168 96 2 2 151 534 701 1.58e-22 95.1
Msa0478500 AT1G32415.1 32.203 177 98 2 2 156 553 729 3.58e-22 94.4
Msa0478500 AT3G20730.1 32.450 151 82 2 2 132 403 553 1.30e-21 92.4
Msa0478500 AT1G53600.1 30.890 191 114 2 2 174 523 713 1.31e-21 92.4
Msa0478500 AT1G53600.2 30.890 191 114 2 2 174 523 713 1.31e-21 92.4
Msa0478500 AT2G35030.1 28.796 191 118 2 2 174 418 608 1.65e-21 92.0
Msa0478500 AT4G31070.1 30.769 169 97 3 2 151 449 616 1.76e-21 92.0
Msa0478500 AT4G31070.2 30.769 169 97 3 2 151 449 616 1.76e-21 92.0
Msa0478500 AT1G04840.1 32.370 173 99 2 1 155 377 549 1.85e-21 92.0
Msa0478500 AT4G20770.1 31.013 158 91 2 2 141 604 761 2.17e-20 89.0
Msa0478500 AT4G04370.1 28.488 172 105 2 1 154 532 703 2.18e-20 89.0
Msa0478500 AT1G62260.1 33.125 160 89 2 2 143 494 653 3.20e-20 88.6
Msa0478500 AT3G21470.1 30.519 154 84 3 2 133 359 511 1.08e-19 86.7
Msa0478500 AT1G03510.1 32.278 158 89 2 2 141 267 424 1.12e-19 86.7
Msa0478500 AT3G51320.1 28.402 169 100 2 2 149 335 503 3.16e-19 85.5
Msa0478500 AT2G02750.1 30.573 157 92 2 2 141 455 611 3.75e-19 85.5
Msa0478500 AT5G52850.1 29.651 172 103 2 2 155 613 784 3.79e-19 85.5
Msa0478500 AT3G50420.1 28.070 171 103 3 2 153 588 757 4.28e-19 85.1
Msa0478500 AT3G50420.2 28.070 171 103 3 2 153 563 732 4.67e-19 85.1
Msa0478500 AT5G08490.4 28.070 171 105 2 19 171 634 804 4.82e-19 85.1
Msa0478500 AT3G61170.1 27.485 171 106 2 19 171 497 667 1.10e-18 84.0
Msa0478500 AT3G22690.3 30.539 167 79 3 2 156 555 696 2.69e-18 82.8
Msa0478500 AT4G22760.1 31.250 160 91 3 2 143 416 574 8.38e-18 81.3
Msa0478500 AT3G49740.1 28.049 164 97 3 2 144 574 737 1.09e-17 81.3
Msa0478500 AT2G39620.1 37.755 98 55 1 2 93 689 786 1.09e-16 78.2
Msa0478500 AT1G71420.1 26.596 188 116 3 3 171 455 639 2.56e-16 77.0
Msa0478500 AT1G43980.1 27.215 158 97 2 15 154 446 603 2.35e-15 74.3
Msa0478500 AT3G58590.1 36.842 95 53 2 2 90 631 724 2.98e-15 73.9
Msa0478500 AT2G46050.1 30.556 144 79 4 2 126 427 568 8.41e-15 72.8
Msa0478500 AT5G03800.1 27.111 225 140 4 2 206 606 826 1.45e-14 72.0
Msa0478500 AT1G64310.1 27.972 143 84 2 2 125 393 535 1.08e-13 69.3
Msa0478500 AT1G29710.1 34.234 111 67 1 2 106 204 314 2.52e-13 68.2
Msa0478500 AT5G47460.1 26.220 164 99 4 2 143 405 568 4.11e-12 64.7
Msa0478500 AT1G19720.1 27.041 196 120 5 2 175 609 803 1.45e-11 63.5
Msa0478500 AT2G25580.2 27.473 182 115 4 2 171 339 515 6.19e-11 61.6
Msa0478500 AT2G25580.1 27.473 182 115 4 2 171 339 515 6.19e-11 61.6

Find 45 sgRNAs with CRISPR-Local

Find 164 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGGGAGTGGTGATTATTTC+TGG 0.112535 3_3:-83300649 Msa0478500:CDS
GGCAAACATGTATGCCAATA+TGG 0.195662 3_3:-83300716 Msa0478500:CDS
TGTATGCCAATATGGGTAAT+TGG 0.198873 3_3:-83300708 Msa0478500:CDS
CAATCATAAAAGTTTGTTTC+GGG 0.244835 3_3:-83301010 Msa0478500:CDS
GATAAATATTGTTTATATTC+AGG 0.247373 3_3:-83300577 Msa0478500:CDS
CGGGAGTCATCGCGGTTATT+TGG 0.274757 3_3:-83300991 Msa0478500:CDS
ACCTTCCCAATTACCCATAT+TGG 0.295382 3_3:+83300702 None:intergenic
TAGCGGTAGGTACGTCCTTT+TGG 0.327010 3_3:-83300737 Msa0478500:intron
TGGATGTGTCGTTGATGTTT+TGG 0.347239 3_3:-83300923 Msa0478500:CDS
TAAGAAAACTGATGAAAGAT+AGG 0.350757 3_3:-83300669 Msa0478500:CDS
GCAATCATAAAAGTTTGTTT+CGG 0.369458 3_3:-83301011 Msa0478500:CDS
GATGCATGGTCATTATGAAT+TGG 0.390972 3_3:-83300803 Msa0478500:CDS
CCAACAAAAGTAACCTCATT+AGG 0.409721 3_3:+83301048 None:intergenic
AAAGTAACCTCATTAGGCTT+TGG 0.419121 3_3:+83301054 None:intergenic
ACGCCATCTATTGAACACTA+TGG 0.420129 3_3:-83300943 Msa0478500:CDS
GTATGCCAATATGGGTAATT+GGG 0.428742 3_3:-83300707 Msa0478500:CDS
ATGCATGGTCATTATGAATT+GGG 0.433000 3_3:-83300802 Msa0478500:CDS
CATACTATTAATAAAAGTTA+AGG 0.436468 3_3:+83300876 None:intergenic
CATCCATAGTGTTCAATAGA+TGG 0.438290 3_3:+83300940 None:intergenic
AAACACATCATCAACAGAAC+TGG 0.444582 3_3:+83300043 None:intergenic
ATTTCTCAACTTTCTTTCCC+AGG 0.455193 3_3:+83300530 None:intergenic
AAGAAAACTGATGAAAGATA+GGG 0.460898 3_3:-83300668 Msa0478500:CDS
CAACATCATTACAGTTTATG+TGG 0.466126 3_3:+83299984 None:intergenic
GCAAACATGTATGCCAATAT+GGG 0.466210 3_3:-83300715 Msa0478500:CDS
TTGAACCAGATGGAGCCATA+TGG 0.470215 3_3:-83300849 Msa0478500:intron
TGAACCAGATGGAGCCATAT+GGG 0.477139 3_3:-83300848 Msa0478500:intron
TGGCATACATGTTTGCCAAA+AGG 0.489426 3_3:+83300722 None:intergenic
GAGTGGTGATTATTTCTGGT+TGG 0.499669 3_3:-83300645 Msa0478500:CDS
TATGAATTGGGACAGAAAGT+TGG 0.504704 3_3:-83300790 Msa0478500:CDS
CTCAATGGATGTTTGATGCA+TGG 0.520982 3_3:-83300817 Msa0478500:CDS
TGGGAATAATAAAATGGCAC+TGG 0.521443 3_3:-83301106 None:intergenic
ACTGGAACTGTTTGAGAAGA+TGG 0.521961 3_3:-83301088 Msa0478500:CDS
GCCAATATGGGTAATTGGGA+AGG 0.563919 3_3:-83300703 Msa0478500:CDS
TTTGAGAAGATGGAGAAGGT+TGG 0.565774 3_3:-83301078 Msa0478500:CDS
ACTGATGAAAGATAGGGGAG+TGG 0.573555 3_3:-83300662 Msa0478500:CDS
TCTCAACTTTCTTTCCCAGG+TGG 0.590549 3_3:+83300533 None:intergenic
GGTTGGACCAAAGCCTAATG+AGG 0.601733 3_3:-83301061 Msa0478500:CDS
GAACCAGATGGAGCCATATG+GGG 0.603034 3_3:-83300847 Msa0478500:intron
AGAAAACTGATGAAAGATAG+GGG 0.614887 3_3:-83300667 Msa0478500:CDS
TAATTGGGAAGGTGTTTCTG+AGG 0.620779 3_3:-83300692 Msa0478500:CDS
AACCAGATGGAGCCATATGG+GGG 0.646132 3_3:-83300846 Msa0478500:intron
GTTTGTTTCGGGAGTCATCG+CGG 0.652346 3_3:-83300999 Msa0478500:CDS
TCGAAGCGGACTAGTGACAA+AGG 0.666414 3_3:-83300899 Msa0478500:CDS
ACTGTTTGAGAAGATGGAGA+AGG 0.668056 3_3:-83301082 Msa0478500:CDS
GTTTACTGATATTGAAGACG+TGG 0.684292 3_3:-83300024 Msa0478500:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATACTATTAATAAAAGTTA+AGG + chr3_3:83300218-83300237 None:intergenic 15.0%
!! GATAAATATTGTTTATATTC+AGG - chr3_3:83300514-83300533 Msa0478500:intron 15.0%
!!! ATACTTTTTTTGTTTTGTTT+GGG + chr3_3:83300885-83300904 None:intergenic 15.0%
!!! AATACTTTTTTTGTTTTGTT+TGG + chr3_3:83300886-83300905 None:intergenic 15.0%
!! CATACTATTAATAAAAGTTA+AGG + chr3_3:83300218-83300237 None:intergenic 15.0%
!! GATAAATATTGTTTATATTC+AGG - chr3_3:83300514-83300533 Msa0478500:intron 15.0%
!!! ATACTTTTTTTGTTTTGTTT+GGG + chr3_3:83300885-83300904 None:intergenic 15.0%
!!! AATACTTTTTTTGTTTTGTT+TGG + chr3_3:83300886-83300905 None:intergenic 15.0%
!!! CAAAAAAAGTATTGAAAATG+AGG - chr3_3:83300893-83300912 Msa0478500:CDS 20.0%
!!! CAAAAAAAGTATTGAAAATG+AGG - chr3_3:83300893-83300912 Msa0478500:CDS 20.0%
!! GCAATCATAAAAGTTTGTTT+CGG - chr3_3:83300080-83300099 Msa0478500:intron 25.0%
!! CAATCATAAAAGTTTGTTTC+GGG - chr3_3:83300081-83300100 Msa0478500:intron 25.0%
! TAAGAAAACTGATGAAAGAT+AGG - chr3_3:83300422-83300441 Msa0478500:intron 25.0%
! AAGAAAACTGATGAAAGATA+GGG - chr3_3:83300423-83300442 Msa0478500:intron 25.0%
!! AAGAAAGTTGAGAAATTTTC+AGG - chr3_3:83300568-83300587 Msa0478500:CDS 25.0%
! ATTTGAATCACTAACTTGAT+AGG - chr3_3:83300618-83300637 Msa0478500:CDS 25.0%
! GTAAATGAAAGCAATTTACA+GGG - chr3_3:83300689-83300708 Msa0478500:CDS 25.0%
!!! TTGAAAGCTTTATTTTTAGC+AGG - chr3_3:83300778-83300797 Msa0478500:intron 25.0%
! CATTATTTCGTCTATTAAGA+TGG - chr3_3:83300834-83300853 Msa0478500:CDS 25.0%
!! GCAATCATAAAAGTTTGTTT+CGG - chr3_3:83300080-83300099 Msa0478500:intron 25.0%
!! CAATCATAAAAGTTTGTTTC+GGG - chr3_3:83300081-83300100 Msa0478500:intron 25.0%
! TAAGAAAACTGATGAAAGAT+AGG - chr3_3:83300422-83300441 Msa0478500:intron 25.0%
! AAGAAAACTGATGAAAGATA+GGG - chr3_3:83300423-83300442 Msa0478500:intron 25.0%
!! AAGAAAGTTGAGAAATTTTC+AGG - chr3_3:83300568-83300587 Msa0478500:CDS 25.0%
! ATTTGAATCACTAACTTGAT+AGG - chr3_3:83300618-83300637 Msa0478500:CDS 25.0%
! GTAAATGAAAGCAATTTACA+GGG - chr3_3:83300689-83300708 Msa0478500:CDS 25.0%
!!! TTGAAAGCTTTATTTTTAGC+AGG - chr3_3:83300778-83300797 Msa0478500:intron 25.0%
! CATTATTTCGTCTATTAAGA+TGG - chr3_3:83300834-83300853 Msa0478500:CDS 25.0%
!!! CTAATGAGGTTACTTTTGTT+GGG - chr3_3:83300044-83300063 Msa0478500:CDS 30.0%
!!! TAATGAGGTTACTTTTGTTG+GGG - chr3_3:83300045-83300064 Msa0478500:CDS 30.0%
! CAAACTTTTATGATTGCAAG+CGG + chr3_3:83300077-83300096 None:intergenic 30.0%
ATGCATGGTCATTATGAATT+GGG - chr3_3:83300289-83300308 Msa0478500:intron 30.0%
AGAAAACTGATGAAAGATAG+GGG - chr3_3:83300424-83300443 Msa0478500:intron 30.0%
ATCAGCAAAAAACTTGTGTA+TGG + chr3_3:83300494-83300513 None:intergenic 30.0%
! TGTACATTGACACATTTTCA+AGG - chr3_3:83300667-83300686 Msa0478500:CDS 30.0%
GGTAAATGAAAGCAATTTAC+AGG - chr3_3:83300688-83300707 Msa0478500:CDS 30.0%
! TTGACATTGACACATTTTCA+AGG - chr3_3:83300752-83300771 Msa0478500:intron 30.0%
! GAAGTGAAATCCTTGTTTAT+TGG - chr3_3:83300859-83300878 Msa0478500:intron 30.0%
AAATGTTATAGCAATCCTGT+TGG - chr3_3:83300917-83300936 Msa0478500:CDS 30.0%
!!! CTAATGAGGTTACTTTTGTT+GGG - chr3_3:83300044-83300063 Msa0478500:CDS 30.0%
!!! TAATGAGGTTACTTTTGTTG+GGG - chr3_3:83300045-83300064 Msa0478500:CDS 30.0%
! CAAACTTTTATGATTGCAAG+CGG + chr3_3:83300077-83300096 None:intergenic 30.0%
ATGCATGGTCATTATGAATT+GGG - chr3_3:83300289-83300308 Msa0478500:intron 30.0%
AGAAAACTGATGAAAGATAG+GGG - chr3_3:83300424-83300443 Msa0478500:intron 30.0%
ATCAGCAAAAAACTTGTGTA+TGG + chr3_3:83300494-83300513 None:intergenic 30.0%
! TGTACATTGACACATTTTCA+AGG - chr3_3:83300667-83300686 Msa0478500:CDS 30.0%
GGTAAATGAAAGCAATTTAC+AGG - chr3_3:83300688-83300707 Msa0478500:CDS 30.0%
! TTGACATTGACACATTTTCA+AGG - chr3_3:83300752-83300771 Msa0478500:intron 30.0%
! GAAGTGAAATCCTTGTTTAT+TGG - chr3_3:83300859-83300878 Msa0478500:intron 30.0%
AAATGTTATAGCAATCCTGT+TGG - chr3_3:83300917-83300936 Msa0478500:CDS 30.0%
AAAGTAACCTCATTAGGCTT+TGG + chr3_3:83300040-83300059 None:intergenic 35.0%
CCAACAAAAGTAACCTCATT+AGG + chr3_3:83300046-83300065 None:intergenic 35.0%
!!! CCTAATGAGGTTACTTTTGT+TGG - chr3_3:83300043-83300062 Msa0478500:CDS 35.0%
CATCCATAGTGTTCAATAGA+TGG + chr3_3:83300154-83300173 None:intergenic 35.0%
GATGCATGGTCATTATGAAT+TGG - chr3_3:83300288-83300307 Msa0478500:intron 35.0%
TATGAATTGGGACAGAAAGT+TGG - chr3_3:83300301-83300320 Msa0478500:intron 35.0%
GCAAACATGTATGCCAATAT+GGG - chr3_3:83300376-83300395 Msa0478500:intron 35.0%
TGTATGCCAATATGGGTAAT+TGG - chr3_3:83300383-83300402 Msa0478500:intron 35.0%
GTATGCCAATATGGGTAATT+GGG - chr3_3:83300384-83300403 Msa0478500:intron 35.0%
!!! ATATGAAGTTTTAAGCCACC+TGG - chr3_3:83300543-83300562 Msa0478500:CDS 35.0%
!!! TATGAAGTTTTAAGCCACCT+GGG - chr3_3:83300544-83300563 Msa0478500:CDS 35.0%
ATTTCTCAACTTTCTTTCCC+AGG + chr3_3:83300564-83300583 None:intergenic 35.0%
!! TGAGAAATTTTCAGGAGACA+AGG - chr3_3:83300576-83300595 Msa0478500:CDS 35.0%
AGTAATAATTCAGCATGTGC+TGG - chr3_3:83300729-83300748 Msa0478500:CDS 35.0%
TCTTTACATCTATGCGTTGA+AGG - chr3_3:83300808-83300827 Msa0478500:CDS 35.0%
TTTGTTTGGGCCAATAAACA+AGG + chr3_3:83300872-83300891 None:intergenic 35.0%
TGATTCTAGATTTGACCAAC+AGG + chr3_3:83300935-83300954 None:intergenic 35.0%
GACTACGGAAAATACTTGTT+AGG + chr3_3:83300960-83300979 None:intergenic 35.0%
! ACAAGTATTTTCCGTAGTCT+TGG - chr3_3:83300961-83300980 Msa0478500:CDS 35.0%
AAACACATCATCAACAGAAC+TGG + chr3_3:83301051-83301070 None:intergenic 35.0%
GTTTACTGATATTGAAGACG+TGG - chr3_3:83301067-83301086 Msa0478500:CDS 35.0%
AAAGTAACCTCATTAGGCTT+TGG + chr3_3:83300040-83300059 None:intergenic 35.0%
CCAACAAAAGTAACCTCATT+AGG + chr3_3:83300046-83300065 None:intergenic 35.0%
!!! CCTAATGAGGTTACTTTTGT+TGG - chr3_3:83300043-83300062 Msa0478500:CDS 35.0%
CATCCATAGTGTTCAATAGA+TGG + chr3_3:83300154-83300173 None:intergenic 35.0%
GATGCATGGTCATTATGAAT+TGG - chr3_3:83300288-83300307 Msa0478500:intron 35.0%
TATGAATTGGGACAGAAAGT+TGG - chr3_3:83300301-83300320 Msa0478500:intron 35.0%
GCAAACATGTATGCCAATAT+GGG - chr3_3:83300376-83300395 Msa0478500:intron 35.0%
TGTATGCCAATATGGGTAAT+TGG - chr3_3:83300383-83300402 Msa0478500:intron 35.0%
GTATGCCAATATGGGTAATT+GGG - chr3_3:83300384-83300403 Msa0478500:intron 35.0%
!!! ATATGAAGTTTTAAGCCACC+TGG - chr3_3:83300543-83300562 Msa0478500:CDS 35.0%
!!! TATGAAGTTTTAAGCCACCT+GGG - chr3_3:83300544-83300563 Msa0478500:CDS 35.0%
ATTTCTCAACTTTCTTTCCC+AGG + chr3_3:83300564-83300583 None:intergenic 35.0%
!! TGAGAAATTTTCAGGAGACA+AGG - chr3_3:83300576-83300595 Msa0478500:CDS 35.0%
AGTAATAATTCAGCATGTGC+TGG - chr3_3:83300729-83300748 Msa0478500:CDS 35.0%
TCTTTACATCTATGCGTTGA+AGG - chr3_3:83300808-83300827 Msa0478500:CDS 35.0%
TTTGTTTGGGCCAATAAACA+AGG + chr3_3:83300872-83300891 None:intergenic 35.0%
TGATTCTAGATTTGACCAAC+AGG + chr3_3:83300935-83300954 None:intergenic 35.0%
GACTACGGAAAATACTTGTT+AGG + chr3_3:83300960-83300979 None:intergenic 35.0%
! ACAAGTATTTTCCGTAGTCT+TGG - chr3_3:83300961-83300980 Msa0478500:CDS 35.0%
AAACACATCATCAACAGAAC+TGG + chr3_3:83301051-83301070 None:intergenic 35.0%
GTTTACTGATATTGAAGACG+TGG - chr3_3:83301067-83301086 Msa0478500:CDS 35.0%
ACTGGAACTGTTTGAGAAGA+TGG - chr3_3:83300003-83300022 Msa0478500:CDS 40.0%
ACTGTTTGAGAAGATGGAGA+AGG - chr3_3:83300009-83300028 Msa0478500:CDS 40.0%
TTTGAGAAGATGGAGAAGGT+TGG - chr3_3:83300013-83300032 Msa0478500:CDS 40.0%
ACGCCATCTATTGAACACTA+TGG - chr3_3:83300148-83300167 Msa0478500:intron 40.0%
!! TGGATGTGTCGTTGATGTTT+TGG - chr3_3:83300168-83300187 Msa0478500:intron 40.0%
AGTATGCATGTTGAACCAGA+TGG - chr3_3:83300232-83300251 Msa0478500:intron 40.0%
CTCAATGGATGTTTGATGCA+TGG - chr3_3:83300274-83300293 Msa0478500:intron 40.0%
TGGCATACATGTTTGCCAAA+AGG + chr3_3:83300372-83300391 None:intergenic 40.0%
GGCAAACATGTATGCCAATA+TGG - chr3_3:83300375-83300394 Msa0478500:intron 40.0%
ACCTTCCCAATTACCCATAT+TGG + chr3_3:83300392-83300411 None:intergenic 40.0%
!! TAATTGGGAAGGTGTTTCTG+AGG - chr3_3:83300399-83300418 Msa0478500:intron 40.0%
!! GAGTGGTGATTATTTCTGGT+TGG - chr3_3:83300446-83300465 Msa0478500:intron 40.0%
CAACGCATAGATGTAAAGAG+AGG + chr3_3:83300807-83300826 None:intergenic 40.0%
!! AGTATTTTCCGTAGTCTTGG+TGG - chr3_3:83300964-83300983 Msa0478500:CDS 40.0%
TAATAGTGCCACCAAGACTA+CGG + chr3_3:83300975-83300994 None:intergenic 40.0%
ACTGGAACTGTTTGAGAAGA+TGG - chr3_3:83300003-83300022 Msa0478500:CDS 40.0%
ACTGTTTGAGAAGATGGAGA+AGG - chr3_3:83300009-83300028 Msa0478500:CDS 40.0%
TTTGAGAAGATGGAGAAGGT+TGG - chr3_3:83300013-83300032 Msa0478500:CDS 40.0%
ACGCCATCTATTGAACACTA+TGG - chr3_3:83300148-83300167 Msa0478500:intron 40.0%
!! TGGATGTGTCGTTGATGTTT+TGG - chr3_3:83300168-83300187 Msa0478500:intron 40.0%
AGTATGCATGTTGAACCAGA+TGG - chr3_3:83300232-83300251 Msa0478500:intron 40.0%
CTCAATGGATGTTTGATGCA+TGG - chr3_3:83300274-83300293 Msa0478500:intron 40.0%
TGGCATACATGTTTGCCAAA+AGG + chr3_3:83300372-83300391 None:intergenic 40.0%
GGCAAACATGTATGCCAATA+TGG - chr3_3:83300375-83300394 Msa0478500:intron 40.0%
ACCTTCCCAATTACCCATAT+TGG + chr3_3:83300392-83300411 None:intergenic 40.0%
!! TAATTGGGAAGGTGTTTCTG+AGG - chr3_3:83300399-83300418 Msa0478500:intron 40.0%
!! GAGTGGTGATTATTTCTGGT+TGG - chr3_3:83300446-83300465 Msa0478500:intron 40.0%
CAACGCATAGATGTAAAGAG+AGG + chr3_3:83300807-83300826 None:intergenic 40.0%
!! AGTATTTTCCGTAGTCTTGG+TGG - chr3_3:83300964-83300983 Msa0478500:CDS 40.0%
TAATAGTGCCACCAAGACTA+CGG + chr3_3:83300975-83300994 None:intergenic 40.0%
!!! GTTGATGTTTTGGCTCGAAG+CGG - chr3_3:83300178-83300197 Msa0478500:intron 45.0%
TTGAACCAGATGGAGCCATA+TGG - chr3_3:83300242-83300261 Msa0478500:intron 45.0%
TGAACCAGATGGAGCCATAT+GGG - chr3_3:83300243-83300262 Msa0478500:intron 45.0%
ATTGAGCAAAGACCCCCATA+TGG + chr3_3:83300260-83300279 None:intergenic 45.0%
ATATGGGGGTCTTTGCTCAA+TGG - chr3_3:83300259-83300278 Msa0478500:intron 45.0%
GAGTTTGAGCCTGAACATAG+CGG - chr3_3:83300337-83300356 Msa0478500:intron 45.0%
GCCAATATGGGTAATTGGGA+AGG - chr3_3:83300388-83300407 Msa0478500:intron 45.0%
ACTGATGAAAGATAGGGGAG+TGG - chr3_3:83300429-83300448 Msa0478500:intron 45.0%
AGGGGAGTGGTGATTATTTC+TGG - chr3_3:83300442-83300461 Msa0478500:intron 45.0%
TCTCAACTTTCTTTCCCAGG+TGG + chr3_3:83300561-83300580 None:intergenic 45.0%
! GTAGTCTTGGTGGCACTATT+AGG - chr3_3:83300974-83300993 Msa0478500:CDS 45.0%
!!! GTTGATGTTTTGGCTCGAAG+CGG - chr3_3:83300178-83300197 Msa0478500:intron 45.0%
TTGAACCAGATGGAGCCATA+TGG - chr3_3:83300242-83300261 Msa0478500:intron 45.0%
TGAACCAGATGGAGCCATAT+GGG - chr3_3:83300243-83300262 Msa0478500:intron 45.0%
ATTGAGCAAAGACCCCCATA+TGG + chr3_3:83300260-83300279 None:intergenic 45.0%
ATATGGGGGTCTTTGCTCAA+TGG - chr3_3:83300259-83300278 Msa0478500:intron 45.0%
GAGTTTGAGCCTGAACATAG+CGG - chr3_3:83300337-83300356 Msa0478500:intron 45.0%
GCCAATATGGGTAATTGGGA+AGG - chr3_3:83300388-83300407 Msa0478500:intron 45.0%
ACTGATGAAAGATAGGGGAG+TGG - chr3_3:83300429-83300448 Msa0478500:intron 45.0%
AGGGGAGTGGTGATTATTTC+TGG - chr3_3:83300442-83300461 Msa0478500:intron 45.0%
TCTCAACTTTCTTTCCCAGG+TGG + chr3_3:83300561-83300580 None:intergenic 45.0%
! GTAGTCTTGGTGGCACTATT+AGG - chr3_3:83300974-83300993 Msa0478500:CDS 45.0%
GGTTGGACCAAAGCCTAATG+AGG - chr3_3:83300030-83300049 Msa0478500:CDS 50.0%
GTTTGTTTCGGGAGTCATCG+CGG - chr3_3:83300092-83300111 Msa0478500:intron 50.0%
!! TCGAAGCGGACTAGTGACAA+AGG - chr3_3:83300192-83300211 Msa0478500:intron 50.0%
GAACCAGATGGAGCCATATG+GGG - chr3_3:83300244-83300263 Msa0478500:intron 50.0%
AACCAGATGGAGCCATATGG+GGG - chr3_3:83300245-83300264 Msa0478500:intron 50.0%
TTGAGCCTGAACATAGCGGT+AGG - chr3_3:83300341-83300360 Msa0478500:intron 50.0%
ACGTACCTACCGCTATGTTC+AGG + chr3_3:83300349-83300368 None:intergenic 50.0%
! TAGCGGTAGGTACGTCCTTT+TGG - chr3_3:83300354-83300373 Msa0478500:intron 50.0%
GGTTGGACCAAAGCCTAATG+AGG - chr3_3:83300030-83300049 Msa0478500:CDS 50.0%
GTTTGTTTCGGGAGTCATCG+CGG - chr3_3:83300092-83300111 Msa0478500:intron 50.0%
!! TCGAAGCGGACTAGTGACAA+AGG - chr3_3:83300192-83300211 Msa0478500:intron 50.0%
GAACCAGATGGAGCCATATG+GGG - chr3_3:83300244-83300263 Msa0478500:intron 50.0%
AACCAGATGGAGCCATATGG+GGG - chr3_3:83300245-83300264 Msa0478500:intron 50.0%
TTGAGCCTGAACATAGCGGT+AGG - chr3_3:83300341-83300360 Msa0478500:intron 50.0%
ACGTACCTACCGCTATGTTC+AGG + chr3_3:83300349-83300368 None:intergenic 50.0%
! TAGCGGTAGGTACGTCCTTT+TGG - chr3_3:83300354-83300373 Msa0478500:intron 50.0%
CGGGAGTCATCGCGGTTATT+TGG - chr3_3:83300100-83300119 Msa0478500:intron 55.0%
CGGGAGTCATCGCGGTTATT+TGG - chr3_3:83300100-83300119 Msa0478500:intron 55.0%
GACCCCCATATGGCTCCATC+TGG + chr3_3:83300250-83300269 None:intergenic 60.0%
GACCCCCATATGGCTCCATC+TGG + chr3_3:83300250-83300269 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 83299998 83301115 83299998 ID=Msa0478500;Name=Msa0478500
chr3_3 mRNA 83299998 83301115 83299998 ID=Msa0478500-mRNA-1;Parent=Msa0478500;Name=Msa0478500-mRNA-1;_AED=0.33;_eAED=0.35;_QI=0|0|0|1|0|0|4|0|207
chr3_3 exon 83300881 83301115 83300881 ID=Msa0478500-mRNA-1:exon:23410;Parent=Msa0478500-mRNA-1
chr3_3 exon 83300787 83300862 83300787 ID=Msa0478500-mRNA-1:exon:23409;Parent=Msa0478500-mRNA-1
chr3_3 exon 83300540 83300750 83300540 ID=Msa0478500-mRNA-1:exon:23408;Parent=Msa0478500-mRNA-1
chr3_3 exon 83299998 83300096 83299998 ID=Msa0478500-mRNA-1:exon:23407;Parent=Msa0478500-mRNA-1
chr3_3 CDS 83300881 83301115 83300881 ID=Msa0478500-mRNA-1:cds;Parent=Msa0478500-mRNA-1
chr3_3 CDS 83300787 83300862 83300787 ID=Msa0478500-mRNA-1:cds;Parent=Msa0478500-mRNA-1
chr3_3 CDS 83300540 83300750 83300540 ID=Msa0478500-mRNA-1:cds;Parent=Msa0478500-mRNA-1
chr3_3 CDS 83299998 83300096 83299998 ID=Msa0478500-mRNA-1:cds;Parent=Msa0478500-mRNA-1
Gene Sequence

>Msa0478500

ATGGCACTGGAACTGTTTGAGAAGATGGAGAAGGTTGGACCAAAGCCTAATGAGGTTACTTTTGTTGGGGTTCTTACCGCTTGCAATCATAAAAGTTTGTTTCGGGAGTCATCGCGGTTATTTGGAATTATGAGTGAAAAATATAACATCACGCCATCTATTGAACACTATGGATGTGTCGTTGATGTTTTGGCTCGAAGCGGACTAGTGACAAAGGCCTTAACTTTTATTAATAATGGAGCCATATGGGGGTCTTTGCTCAATGGATGTTTGATGCATGGTCATTATGAATTGGGACAGAAAGTTGGCAAGTACGTCCTTTTGGCAAACATGTATGCCAATATGGGTAATTGGGAAGGTGTTTCTGAGGTAAGAAAACTGATGAAAGATAGGGGAGTGGTGATTATTTCTGGTTGGAGTTTCATTGAAATCGATCAAACCATACACAAGTTTTTTGCTGATGATAAATATTGTTTATATTCAGGAGAAATATATGAAGTTTTAAGCCACCTGGGAAAGAAAAGTCTAGCAACATATTGCTTCTTGATGTACTCCAGTTCTGTTGATGATGTGTTTACTGATATTGAAGACGTGGCTTTCATGTCACTGCTTCCACATAAA
Protein sequence

>Msa0478500

MALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFRESSRLFGIMSEKYNITPSIEHYGCVVDVLARSGLVTKALTFINNGAIWGSLLNGCLMHGHYELGQKVGKYVLLANMYANMGNWEGVSEVRKLMKDRGVVIISGWSFIEIDQTIHKFFADDKYCLYSGEIYEVLSHLGKKSLATYCFLMYSSSVDDVFTDIEDVAFMSLLPHK