AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0479510

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0479510 MtrunA17_Chr3g0136151 78.647 754 146 5 20 769 21 763 0.0 1170
Msa0479510 MtrunA17_Chr3g0143251 75.455 770 182 4 1 768 1 765 0.0 1154
Msa0479510 MtrunA17_Chr3g0143241 80.042 476 88 4 1 474 1 471 0.0 756
Msa0479510 MtrunA17_Chr8g0354771 48.262 748 360 14 41 769 26 765 0.0 659
Msa0479510 MtrunA17_Chr8g0354741 48.722 626 307 9 147 769 21 635 0.0 562
Msa0479510 MtrunA17_Chr8g0369891 40.346 751 399 19 39 769 33 754 2.22e-178 530
Msa0479510 MtrunA17_Chr5g0407701 40.267 750 404 20 39 769 27 751 2.39e-177 527
Msa0479510 MtrunA17_Chr4g0057471 41.886 721 390 13 65 769 3 710 3.54e-177 525
Msa0479510 MtrunA17_Chr4g0026641 40.256 780 416 19 10 769 6 755 4.24e-174 518
Msa0479510 MtrunA17_Chr8g0377961 42.252 755 396 16 35 767 38 774 9.19e-174 518
Msa0479510 MtrunA17_Chr4g0076611 42.318 716 368 17 74 767 1 693 2.63e-172 512
Msa0479510 MtrunA17_Chr3g0120521 39.847 783 419 19 15 767 9 769 5.91e-171 511
Msa0479510 MtrunA17_Chr4g0057531 40.053 759 417 14 38 769 31 778 1.69e-162 489
Msa0479510 MtrunA17_Chr5g0401511 42.216 758 388 24 35 768 30 761 3.24e-161 486
Msa0479510 MtrunA17_Chr4g0020651 42.556 759 384 24 35 768 26 757 8.15e-161 484
Msa0479510 MtrunA17_Chr4g0037221 39.172 725 392 14 74 768 63 768 8.90e-160 482
Msa0479510 MtrunA17_Chr4g0057481 41.399 686 368 12 97 764 17 686 2.24e-159 478
Msa0479510 MtrunA17_Chr2g0300751 40.941 723 371 20 74 767 77 772 2.94e-159 481
Msa0479510 MtrunA17_Chr8g0351011 39.946 746 397 20 37 767 42 751 4.54e-159 479
Msa0479510 MtrunA17_Chr3g0105451 78.767 292 50 1 478 769 1 280 1.29e-158 461
Msa0479510 MtrunA17_Chr1g0170081 38.904 748 398 22 35 769 31 732 5.61e-157 474
Msa0479510 MtrunA17_Chr1g0204321 39.249 772 412 22 32 768 28 777 9.04e-157 474
Msa0479510 MtrunA17_Chr1g0146271 38.603 759 387 19 35 769 31 734 2.00e-156 472
Msa0479510 MtrunA17_Chr6g0470881 38.731 772 412 20 6 767 9 729 1.68e-155 470
Msa0479510 MtrunA17_Chr7g0250371 38.974 780 409 24 31 764 23 781 2.49e-155 471
Msa0479510 MtrunA17_Chr7g0246451 40.296 742 397 19 38 767 38 745 3.80e-155 469
Msa0479510 MtrunA17_Chr7g0250481 38.959 788 404 23 38 767 29 797 3.90e-155 471
Msa0479510 MtrunA17_Chr1g0146251 38.658 745 408 19 35 769 31 736 1.19e-154 468
Msa0479510 MtrunA17_Chr7g0227991 38.789 776 412 22 6 769 11 735 1.70e-154 467
Msa0479510 MtrunA17_Chr3g0105461 66.220 373 80 5 1 371 1 329 4.67e-153 450
Msa0479510 MtrunA17_Chr4g0057461 41.875 640 333 13 153 767 3 628 5.62e-153 460
Msa0479510 MtrunA17_Chr7g0262161 39.342 760 404 22 41 768 27 761 1.14e-152 463
Msa0479510 MtrunA17_Chr2g0285121 38.668 781 409 23 37 768 24 783 2.33e-152 463
Msa0479510 MtrunA17_Chr6g0470851 38.451 749 403 19 31 767 27 729 6.76e-152 461
Msa0479510 MtrunA17_Chr8g0344331 38.947 760 412 21 36 764 33 771 7.17e-152 462
Msa0479510 MtrunA17_Chr2g0285111 38.619 782 410 21 36 768 26 786 3.07e-151 461
Msa0479510 MtrunA17_Chr7g0250391 39.820 776 407 25 31 764 22 779 3.61e-151 460
Msa0479510 MtrunA17_Chr7g0266051 39.011 728 396 20 54 767 12 705 6.62e-151 457
Msa0479510 MtrunA17_Chr4g0053781 39.633 762 395 27 38 768 28 755 1.65e-150 457
Msa0479510 MtrunA17_Chr7g0250411 38.903 784 409 26 31 767 23 783 1.71e-150 459
Msa0479510 MtrunA17_Chr7g0250331 39.547 794 393 28 38 764 30 803 2.73e-150 459
Msa0479510 MtrunA17_Chr1g0152771 38.058 762 417 21 38 768 26 763 4.59e-149 454
Msa0479510 MtrunA17_Chr5g0423261 41.562 640 330 14 152 767 2 621 3.01e-148 447
Msa0479510 MtrunA17_Chr8g0334491 37.418 759 414 22 24 769 19 729 4.14e-148 451
Msa0479510 MtrunA17_Chr4g0057511 41.786 627 335 12 157 767 3 615 3.02e-147 444
Msa0479510 MtrunA17_Chr3g0079971 37.070 785 421 23 4 769 3 733 6.52e-147 447
Msa0479510 MtrunA17_Chr4g0070391 37.728 766 402 21 37 768 28 752 1.22e-146 447
Msa0479510 MtrunA17_Chr8g0344971 38.442 770 403 23 37 769 26 761 9.54e-145 443
Msa0479510 MtrunA17_Chr8g0334521 36.822 793 411 25 1 767 5 733 2.74e-144 441
Msa0479510 MtrunA17_Chr4g0057491 41.417 635 336 14 153 767 3 621 4.76e-143 434
Msa0479510 MtrunA17_Chr7g0248871 38.101 790 426 23 6 767 9 763 1.92e-140 432
Msa0479510 MtrunA17_Chr7g0246461 39.633 709 366 21 74 768 80 740 2.59e-140 431
Msa0479510 MtrunA17_Chr1g0189561 36.888 797 423 25 6 767 9 760 7.62e-139 427
Msa0479510 MtrunA17_Chr4g0057061 38.217 785 421 24 6 767 31 774 8.87e-137 422
Msa0479510 MtrunA17_Chr8g0345991 37.849 716 394 19 74 768 69 754 7.26e-136 420
Msa0479510 MtrunA17_Chr8g0345981 37.917 720 390 19 74 768 71 758 9.18e-136 420
Msa0479510 MtrunA17_Chr3g0134621 35.832 787 420 21 6 768 11 736 1.65e-134 416
Msa0479510 MtrunA17_Chr8g0376841 41.725 568 294 12 37 587 38 585 4.46e-133 407
Msa0479510 MtrunA17_Chr1g0189251 35.934 782 446 20 6 768 9 754 4.91e-133 412
Msa0479510 MtrunA17_Chr8g0345971 38.108 719 386 20 74 769 78 760 1.15e-132 411
Msa0479510 MtrunA17_Chr5g0398241 37.626 792 423 24 1 764 2 750 9.49e-131 406
Msa0479510 MtrunA17_Chr7g0276151 37.225 728 376 22 74 768 77 756 5.53e-130 404
Msa0479510 MtrunA17_Chr5g0398331 39.609 717 378 22 65 765 71 748 1.65e-129 403
Msa0479510 MtrunA17_Chr8g0345961 38.683 729 375 22 74 768 67 757 5.49e-129 402
Msa0479510 MtrunA17_Chr5g0398401 37.500 792 424 24 1 764 2 750 7.99e-129 401
Msa0479510 MtrunA17_Chr5g0439271 40.331 605 323 13 190 767 8 601 2.45e-127 392
Msa0479510 MtrunA17_Chr2g0303881 38.292 726 377 24 74 768 41 726 6.07e-124 388
Msa0479510 MtrunA17_Chr5g0398311 37.357 787 432 25 1 767 1 746 6.15e-120 378
Msa0479510 MtrunA17_Chr5g0398351 37.057 761 403 23 34 764 16 730 1.16e-116 385
Msa0479510 MtrunA17_Chr5g0398351 36.248 789 438 23 1 764 753 1501 2.33e-116 384
Msa0479510 MtrunA17_Chr7g0248861 40.348 575 292 15 69 620 76 622 4.59e-110 355
Msa0479510 MtrunA17_Chr7g0248861 50.000 228 100 6 144 362 637 859 6.66e-51 191
Msa0479510 MtrunA17_Chr2g0301011 38.475 564 271 15 102 661 3 494 2.19e-109 342
Msa0479510 MtrunA17_Chr5g0447171 37.165 522 252 11 295 763 5 503 9.59e-92 296
Msa0479510 MtrunA17_Chr4g0071871 30.719 765 455 22 55 766 70 812 6.40e-90 300
Msa0479510 MtrunA17_Chr2g0298601 30.663 724 438 18 55 730 70 777 3.43e-86 290
Msa0479510 MtrunA17_Chr7g0250461 40.876 411 212 11 31 415 23 428 1.57e-84 277
Msa0479510 MtrunA17_Chr3g0142961 94.203 138 8 0 590 727 1 138 6.89e-84 262
Msa0479510 MtrunA17_Chr3g0097061 41.425 379 188 10 102 473 3 354 6.21e-81 266
Msa0479510 MtrunA17_Chr3g0097061 37.500 120 68 1 530 649 318 430 7.95e-18 87.0
Msa0479510 MtrunA17_Chr3g0142981 76.571 175 16 1 194 368 32 181 1.29e-80 256
Msa0479510 MtrunA17_Chr6g0480721 42.730 337 167 7 72 399 3 322 6.78e-79 266
Msa0479510 MtrunA17_Chr6g0480721 33.952 377 216 13 398 767 249 599 1.37e-46 176
Msa0479510 MtrunA17_Chr7g0261691 43.275 342 170 9 149 474 13 346 1.11e-75 248
Msa0479510 MtrunA17_Chr2g0302951 30.211 758 425 29 53 740 88 811 7.29e-75 259
Msa0479510 MtrunA17_Chr4g0075331 30.831 746 435 26 62 752 2 721 7.92e-75 257
Msa0479510 MtrunA17_Chr3g0143221 69.274 179 39 2 590 768 1 163 2.14e-74 238
Msa0479510 MtrunA17_Chr4g0026651 43.226 310 136 7 89 363 2 306 5.09e-71 235
Msa0479510 MtrunA17_Chr8g0380961 28.898 744 440 28 59 740 102 818 2.64e-69 244
Msa0479510 MtrunA17_Chr2g0301911 40.055 362 178 12 164 515 28 360 3.31e-67 227
Msa0479510 MtrunA17_Chr4g0035881 39.410 373 163 11 221 586 4 320 6.42e-67 224
Msa0479510 MtrunA17_Chr7g0261701 41.196 301 164 6 468 767 1 289 2.00e-63 214
Msa0479510 MtrunA17_Chr8g0346361 49.770 217 85 7 166 377 4 201 1.84e-55 198
Msa0479510 MtrunA17_Chr8g0346361 35.179 307 177 7 467 767 206 496 7.40e-45 168
Msa0479510 MtrunA17_Chr2g0312841 50.785 191 81 4 166 354 9 188 8.31e-53 181
Msa0479510 MtrunA17_Chr7g0250441 43.357 286 139 11 491 767 11 282 3.19e-52 184
Msa0479510 MtrunA17_Chr3g0103071 40.000 290 160 7 268 550 1 283 1.03e-49 176
Msa0479510 MtrunA17_Chr3g0143021 77.982 109 20 2 70 178 3 107 3.37e-48 166
Msa0479510 MtrunA17_Chr4g0026661 39.768 259 146 6 512 769 12 261 3.19e-47 168
Msa0479510 MtrunA17_Chr3g0142971 91.765 85 7 0 495 579 1 85 5.57e-47 161
Msa0479510 MtrunA17_Chr3g0103061 41.079 241 117 6 38 259 26 260 1.64e-45 164
Msa0479510 MtrunA17_Chr3g0143231 87.640 89 11 0 495 583 1 89 5.89e-45 155
Msa0479510 MtrunA17_Chr5g0436021 51.852 162 64 4 191 346 31 184 5.83e-42 151
Msa0479510 MtrunA17_Chr2g0301021 29.948 384 175 11 35 414 31 324 1.16e-37 145
Msa0479510 MtrunA17_Chr2g0312861 33.333 258 158 5 512 767 1 246 5.31e-36 138
Msa0479510 MtrunA17_Chr2g0301031 34.363 259 158 4 512 769 1 248 1.64e-35 135
Msa0479510 MtrunA17_Chr4g0071191 36.216 185 108 4 467 650 32 207 1.50e-29 118
Msa0479510 MtrunA17_Chr4g0035871 44.444 144 75 2 50 190 9 150 5.81e-27 107
Msa0479510 MtrunA17_Chr2g0301921 32.420 219 135 5 552 769 1 207 1.07e-26 108
Msa0479510 MtrunA17_Chr3g0103081 35.811 148 87 3 620 767 3 142 7.00e-23 95.5
Msa0479510 MtrunA17_Chr5g0418921 46.269 134 59 3 486 611 6 134 1.40e-22 95.9
Msa0479510 MtrunA17_Chr8g0354731 43.590 117 60 4 41 152 54 169 3.41e-22 94.4
Msa0479510 MtrunA17_Chr5g0439281 35.838 173 91 7 38 192 27 197 3.58e-21 92.4
Msa0479510 MtrunA17_Chr3g0143011 70.000 60 18 0 309 368 1 60 1.27e-18 80.5
Msa0479510 MtrunA17_Chr8g0346351 33.918 171 95 5 1 166 2 159 3.76e-17 79.7
Msa0479510 MtrunA17_Chr5g0436031 31.953 169 104 5 602 767 20 180 1.11e-15 77.0
Msa0479510 MtrunA17_Chr8g0376851 28.994 169 106 6 605 767 11 171 1.91e-15 75.1
Msa0479510 MtrunA17_Chr7g0248851 35.065 154 84 7 620 767 3 146 2.13e-15 74.3
Msa0479510 MtrunA17_Chr5g0447151 37.209 129 66 4 39 154 29 155 1.39e-14 72.0
Msa0479510 MtrunA17_Chr3g0077671 50.704 71 33 2 544 612 238 308 1.35e-12 69.3
Msa0479510 MtrunA17_Chr4g0057501 33.333 129 66 3 41 154 7 130 1.22e-11 62.8
Msa0479510 MtrunA17_Chr4g0057521 39.785 93 48 2 64 152 9 97 1.40e-11 63.5
Msa0479510 MtrunA17_Chr5g0434941 48.684 76 36 2 274 348 2 75 1.77e-11 60.5
Msa0479510 MtrunA17_Chr2g0312831 38.636 88 51 2 39 123 35 122 4.80e-11 61.2
Msa0479510 MtrunA17_Chr5g0398341 37.500 96 58 1 552 647 1 94 8.44e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0479510 AT1G20160.1 57.290 775 311 9 1 768 1 762 0.0 857
Msa0479510 AT1G20160.2 59.577 710 282 5 62 768 16 723 0.0 848
Msa0479510 AT1G20150.1 51.812 745 336 10 41 768 33 771 0.0 761
Msa0479510 AT1G20160.3 56.154 520 209 8 1 513 1 508 0.0 548
Msa0479510 AT2G04160.1 41.222 769 392 21 37 769 28 772 0.0 538
Msa0479510 AT5G59100.1 40.756 741 395 18 37 767 31 737 2.05e-171 511
Msa0479510 AT5G59090.1 40.830 747 389 20 34 769 26 730 9.28e-166 497
Msa0479510 AT5G59810.1 39.130 759 414 16 38 769 39 776 9.50e-166 498
Msa0479510 AT3G46850.1 41.532 744 387 21 35 767 28 734 2.03e-165 496
Msa0479510 AT5G59090.2 40.696 747 385 20 34 769 26 725 1.75e-164 493
Msa0479510 AT5G59090.3 40.830 747 387 21 34 769 26 728 2.50e-164 493
Msa0479510 AT5G59130.4 39.575 753 386 20 31 767 26 725 3.75e-163 490
Msa0479510 AT5G67360.1 40.555 757 408 21 31 768 22 755 3.03e-162 488
Msa0479510 AT5G59120.1 39.735 755 388 22 31 767 22 727 4.16e-162 487
Msa0479510 AT3G14240.1 42.271 731 368 21 73 769 61 771 2.90e-160 484
Msa0479510 AT5G59130.1 39.442 753 383 21 31 767 26 721 3.72e-160 482
Msa0479510 AT3G46840.1 40.000 740 403 19 35 767 29 734 2.25e-159 480
Msa0479510 AT5G45650.2 39.773 792 396 21 36 769 22 790 1.43e-158 480
Msa0479510 AT5G45650.1 39.773 792 396 21 36 769 22 790 1.43e-158 480
Msa0479510 AT5G59130.2 39.177 753 379 21 31 767 26 715 1.01e-157 476
Msa0479510 AT4G34980.1 38.832 788 421 20 8 768 6 759 1.26e-157 477
Msa0479510 AT5G59130.3 39.365 724 371 19 59 767 16 686 1.04e-156 472
Msa0479510 AT2G05920.1 39.630 757 398 21 38 768 27 750 1.53e-156 473
Msa0479510 AT5G58840.1 39.182 758 364 19 31 767 25 706 2.17e-152 461
Msa0479510 AT4G10540.1 38.816 760 409 20 37 765 27 761 1.91e-151 461
Msa0479510 AT5G58830.1 38.551 773 392 22 6 769 9 707 4.70e-151 458
Msa0479510 AT4G00230.1 40.559 752 388 21 35 767 32 743 8.73e-151 458
Msa0479510 AT1G32950.1 38.953 783 419 19 9 764 8 758 3.65e-150 457
Msa0479510 AT4G10550.1 38.065 796 415 22 9 765 8 764 5.10e-150 457
Msa0479510 AT5G59190.1 40.741 702 361 17 74 766 32 687 7.62e-150 454
Msa0479510 AT5G03620.1 37.976 761 420 22 32 767 25 758 9.69e-150 456
Msa0479510 AT1G32960.1 39.239 762 407 21 35 765 27 763 2.72e-149 456
Msa0479510 AT4G10550.3 38.198 788 409 22 17 765 32 780 5.44e-149 455
Msa0479510 AT1G32940.1 37.647 765 417 20 33 764 22 759 3.02e-148 452
Msa0479510 AT4G10510.3 38.693 765 401 22 37 765 31 763 1.78e-147 451
Msa0479510 AT3G14067.1 37.533 762 418 16 39 767 31 767 1.86e-147 451
Msa0479510 AT4G10510.1 38.845 762 398 22 40 765 22 751 3.77e-147 449
Msa0479510 AT1G32950.2 40.586 717 381 16 71 764 13 707 4.30e-147 448
Msa0479510 AT1G66210.1 38.076 759 405 20 31 765 31 748 4.93e-147 449
Msa0479510 AT1G32940.4 38.728 723 387 18 71 764 13 708 6.10e-146 445
Msa0479510 AT1G32940.2 38.728 723 387 18 71 764 13 708 6.10e-146 445
Msa0479510 AT5G58820.1 39.271 741 376 23 36 767 25 700 6.19e-146 444
Msa0479510 AT4G10550.4 39.218 742 379 20 62 765 1 708 1.07e-145 444
Msa0479510 AT4G10550.2 39.218 742 379 20 62 765 1 708 1.07e-145 444
Msa0479510 AT5G51750.1 37.282 802 435 26 4 768 5 775 1.28e-145 446
Msa0479510 AT4G10520.1 36.993 765 436 18 17 764 6 741 3.55e-145 444
Msa0479510 AT4G10510.4 39.242 739 382 21 62 765 1 707 1.57e-144 441
Msa0479510 AT4G10510.2 39.503 724 374 20 74 765 1 692 3.79e-144 440
Msa0479510 AT1G66220.1 36.737 754 401 18 39 764 36 741 2.60e-142 437
Msa0479510 AT1G04110.1 38.187 728 392 19 74 769 71 772 5.55e-141 434
Msa0479510 AT4G15040.2 38.589 723 377 25 59 767 16 685 3.04e-136 419
Msa0479510 AT4G15040.1 38.589 723 377 25 59 767 16 685 3.04e-136 419
Msa0479510 AT4G21640.1 35.516 794 392 21 6 764 16 724 4.00e-135 417
Msa0479510 AT4G10530.1 36.255 753 409 22 37 764 26 732 1.88e-134 416
Msa0479510 AT5G11940.1 36.304 763 408 20 36 765 33 750 8.08e-134 415
Msa0479510 AT4G26330.2 37.586 729 398 19 71 767 18 721 1.54e-133 413
Msa0479510 AT1G01900.1 38.827 716 387 19 78 768 83 772 2.51e-133 414
Msa0479510 AT4G21650.1 36.399 772 401 21 34 764 35 757 3.55e-133 413
Msa0479510 AT5G58840.3 43.310 568 252 15 31 586 25 534 3.33e-132 404
Msa0479510 AT4G21630.1 35.854 767 405 22 35 764 34 750 7.87e-132 409
Msa0479510 AT5G45640.1 36.780 764 381 21 71 769 27 753 6.92e-131 407
Msa0479510 AT4G26330.1 36.878 743 398 20 71 767 18 735 1.28e-129 403
Msa0479510 AT5G03620.2 42.355 569 295 16 32 584 25 576 5.09e-128 394
Msa0479510 AT4G21323.1 35.020 751 428 19 40 767 80 793 8.25e-128 400
Msa0479510 AT4G21326.1 36.552 725 407 15 62 769 1 689 5.49e-127 395
Msa0479510 AT4G00230.2 43.463 566 274 16 35 583 32 568 1.95e-124 385
Msa0479510 AT1G32940.3 39.094 596 316 15 36 601 25 603 5.20e-121 377
Msa0479510 AT5G67090.1 34.443 781 407 26 7 754 5 713 2.50e-116 368
Msa0479510 AT1G32970.1 34.788 756 408 24 37 764 21 719 9.08e-110 351
Msa0479510 AT5G58840.2 42.105 494 217 14 31 513 25 460 6.58e-108 338
Msa0479510 AT2G19170.1 31.105 733 424 22 55 730 66 774 3.10e-92 306
Msa0479510 AT2G19170.2 31.105 733 424 22 55 730 66 774 3.10e-92 306
Msa0479510 AT4G30020.3 31.774 727 412 22 55 722 66 767 1.75e-89 299
Msa0479510 AT4G30020.1 31.774 727 412 22 55 722 66 767 1.75e-89 299
Msa0479510 AT4G30020.4 31.774 727 412 22 55 722 66 767 1.75e-89 299
Msa0479510 AT4G30020.2 31.774 727 412 22 55 722 66 767 1.75e-89 299
Msa0479510 AT2G39850.1 32.680 765 413 36 59 767 47 765 3.29e-88 295
Msa0479510 AT1G30600.1 30.936 737 414 26 52 722 75 782 2.17e-83 283
Msa0479510 AT4G20430.3 28.517 782 462 27 55 769 99 850 4.50e-76 263
Msa0479510 AT4G20430.1 28.517 782 462 27 55 769 99 850 4.50e-76 263
Msa0479510 AT5G44530.1 28.869 769 443 29 21 722 58 789 1.28e-75 262
Msa0479510 AT4G20430.2 28.571 770 453 24 55 769 99 826 6.50e-75 260
Msa0479510 AT5G44530.2 27.995 793 444 30 21 722 58 814 6.58e-71 249
Msa0479510 AT1G62340.1 29.837 734 417 28 55 719 78 782 6.03e-69 243
Msa0479510 AT5G44530.3 27.837 564 326 20 21 527 58 597 2.78e-49 184
Msa0479510 AT1G32980.1 38.144 194 106 6 546 735 1 184 6.71e-31 120
Msa0479510 AT5G59110.1 27.545 167 112 5 607 769 7 168 2.02e-11 63.9

Find 216 sgRNAs with CRISPR-Local

Find 317 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATTCATATCTAATGAATT+TGG 0.155343 3_3:-84518201 None:intergenic
TTAGATATGAATAAAGTTAA+AGG 0.212363 3_3:+84518210 Msa0479510:CDS
TGATAGAGGGGAGAAATTTA+TGG 0.232373 3_3:-84517998 None:intergenic
GACAATTCTGCTCACATTCT+TGG 0.234975 3_3:-84519831 None:intergenic
GTGTGCTTTCCTTCCTGTTA+TGG 0.254058 3_3:+84517332 Msa0479510:CDS
TCAATTCATCCAACTGTAAT+AGG 0.274450 3_3:+84516344 Msa0479510:CDS
ATGTCATGCCCACATGTTTC+AGG 0.281839 3_3:+84519137 Msa0479510:CDS
TGAGTTGTTATTCAGGTATA+TGG 0.287310 3_3:+84516239 Msa0479510:intron
AGGATTGTGGCAGCATCTTT+TGG 0.290735 3_3:-84518387 None:intergenic
CTGCTGCTGTCGACGCTGTA+TGG 0.292455 3_3:-84517220 None:intergenic
TCTTCATCAGACATCGTAAT+TGG 0.303323 3_3:+84516069 Msa0479510:CDS
TGGAGTTGTGTCTGTCTTCC+CGG 0.305107 3_3:+84515951 Msa0479510:CDS
TTTCCTTCCTGTTATGGCTC+TGG 0.306329 3_3:+84517338 Msa0479510:CDS
GTCCCTGATTTCATGTTATA+CGG 0.306362 3_3:-84519110 None:intergenic
TTGGGGCAGTTGAAACTATC+AGG 0.307187 3_3:-84519734 None:intergenic
TAAATCGCTAACCTCGCTTC+AGG 0.312060 3_3:-84517305 None:intergenic
GAAACTATCAGGGACGGTTT+TGG 0.328049 3_3:-84519723 None:intergenic
TCTCTAAAAGAAGATTTGTT+TGG 0.337722 3_3:+84520004 Msa0479510:CDS
GTGAGTGGTGCTTCGTACTA+TGG 0.338135 3_3:+84517251 Msa0479510:CDS
TCCGGTTATCAATGGATAAT+CGG 0.338486 3_3:-84518028 None:intergenic
TTCCTTCCTGTTATGGCTCT+GGG 0.338550 3_3:+84517339 Msa0479510:CDS
GTAGCATTTGCACCAGGGTT+AGG 0.339391 3_3:-84517158 None:intergenic
CCACATGTTTCAGGCCTTGC+AGG 0.343066 3_3:+84519146 Msa0479510:CDS
ATTGCCACACCATATGATTA+TGG 0.344077 3_3:+84519578 Msa0479510:CDS
TATTCATATCTAATGAATTT+GGG 0.344325 3_3:-84518200 None:intergenic
AGCTCCATACAACACGTTCT+TGG 0.344442 3_3:+84515986 Msa0479510:CDS
ATAGTGGTTGTTTGCTCCGC+TGG 0.356716 3_3:+84517500 Msa0479510:CDS
ACCTTGTTGAATTGACATAT+TGG 0.359621 3_3:-84518410 None:intergenic
ACACCTGGTGCTGCAATATC+AGG 0.363178 3_3:-84519023 None:intergenic
TTTGGTCTTACAACTGTTGC+TGG 0.365382 3_3:-84518369 None:intergenic
GATCCATTACATGGAGTAAT+GGG 0.368881 3_3:+84520026 Msa0479510:CDS
TAGCGTAAGTTTGCGTTTCA+AGG 0.370108 3_3:-84516014 None:intergenic
TGGAATGCTCCGATCGCAAT+TGG 0.372944 3_3:-84517461 None:intergenic
ATGCAGTCCAACGTTGTCTT+AGG 0.373158 3_3:+84517605 Msa0479510:CDS
TTTGTAAACTCTAATTTCTC+TGG 0.374943 3_3:-84519932 None:intergenic
GTGCAAGGGATGGGTGGATT+AGG 0.376765 3_3:+84518294 Msa0479510:CDS
ATAATTAACCTGTATCTAAC+AGG 0.381875 3_3:-84516092 None:intergenic
CTAATTTCTCTGGAATCAAC+TGG 0.387769 3_3:-84519922 None:intergenic
CTATGTAACACAAGTAGTTT+AGG 0.388907 3_3:-84519670 None:intergenic
TGACCTCAAATTCGTGGTAA+TGG 0.390077 3_3:-84519555 None:intergenic
CCTTTCCAACCAGGTGGAAT+AGG 0.390458 3_3:-84516298 None:intergenic
CACATCTACTCCATCGGAAA+TGG 0.397559 3_3:-84517384 None:intergenic
GACCTCAAATTCGTGGTAAT+GGG 0.405850 3_3:-84519554 None:intergenic
AATTACAAACACGGATTCTC+AGG 0.406813 3_3:+84515877 Msa0479510:CDS
TCACCGTATAACATGAAATC+AGG 0.410151 3_3:+84519107 Msa0479510:CDS
TCATTCTCCAATTGAGTGAT+GGG 0.418501 3_3:-84515639 None:intergenic
ATGATCAATAGTTGAATCCT+TGG 0.418836 3_3:-84519753 None:intergenic
TTAAATTTAAACACCCTACT+TGG 0.420271 3_3:+84519174 Msa0479510:CDS
ATAGCAATCACAAACTTCAT+TGG 0.424120 3_3:+84519800 Msa0479510:CDS
AATTACACGGTTAATACAAA+AGG 0.425257 3_3:-84520067 None:intergenic
AAGTAGAGGAGAAAATAATT+TGG 0.425366 3_3:-84519976 None:intergenic
ATTGGGTCTGTCGTCAAGTC+TGG 0.426192 3_3:-84517443 None:intergenic
CCCGATTATCCATTGATAAC+CGG 0.427323 3_3:+84518027 Msa0479510:CDS
TTTCCCATTACTCCATGTAA+TGG 0.430740 3_3:-84520029 None:intergenic
GCAGATTCTCCGGTTATCAA+TGG 0.435208 3_3:-84518036 None:intergenic
GTCATTCTCCAATTGAGTGA+TGG 0.437272 3_3:-84515640 None:intergenic
TGATCAATAGTTGAATCCTT+GGG 0.437416 3_3:-84519752 None:intergenic
GTAATTGGCCTGTTAGATAC+AGG 0.439720 3_3:+84516084 Msa0479510:CDS
ACCAATCCATGCTGCAAGAA+TGG 0.444946 3_3:-84519048 None:intergenic
GTTTGCTCCGCTGGGAATGA+TGG 0.448132 3_3:+84517509 Msa0479510:CDS
TCTCCTGCTCCATAATCATA+TGG 0.449055 3_3:-84519587 None:intergenic
AATTCCAAGAACGTGTTGTA+TGG 0.449971 3_3:-84515990 None:intergenic
AGATTATAAGCCTGCACCTA+TGG 0.451616 3_3:+84518825 Msa0479510:CDS
TAGCATTTGCACCAGGGTTA+GGG 0.455304 3_3:-84517157 None:intergenic
AAAATTAATTTGAAGCAATC+CGG 0.455831 3_3:+84518771 Msa0479510:intron
AGTCGTCTTGGCAGATTCTC+CGG 0.457967 3_3:-84518046 None:intergenic
CTAAACTACTTGTGTTACAT+AGG 0.470298 3_3:+84519671 Msa0479510:CDS
AAGGATCCCAGAGCCATAAC+AGG 0.473091 3_3:-84517345 None:intergenic
ACAAGTTTATATTGTGTACA+TGG 0.476611 3_3:+84515665 Msa0479510:CDS
GCTGTGGTAGCATTTGCACC+AGG 0.478639 3_3:-84517164 None:intergenic
GGATCCATTACATGGAGTAA+TGG 0.479293 3_3:+84520025 Msa0479510:CDS
AAATCGCTAACCTCGCTTCA+GGG 0.480509 3_3:-84517304 None:intergenic
ATTATTTATAAGGAATGAAA+AGG 0.481008 3_3:+84515843 Msa0479510:intron
TGCTGCTGTCGACGCTGTAT+GGG 0.482154 3_3:-84517219 None:intergenic
CTACCACAGCAAACACGGTA+AGG 0.483699 3_3:+84517177 Msa0479510:CDS
TGATGAAGAGGGAGAAGACT+TGG 0.484256 3_3:-84516055 None:intergenic
CCGGTTATCAATGGATAATC+GGG 0.484675 3_3:-84518027 None:intergenic
TAGTGGTTGTTTGCTCCGCT+GGG 0.486756 3_3:+84517501 Msa0479510:CDS
TGAAGGCCCTCTACTTGAAA+AGG 0.487528 3_3:-84518854 None:intergenic
GCCATTGTCGATGCTCCCGA+TGG 0.487641 3_3:+84519890 Msa0479510:CDS
CTGGCAGAAGGGACAGCAAA+AGG 0.488288 3_3:+84517275 Msa0479510:CDS
TGGAGCTTCAGAATGGGATC+CGG 0.492745 3_3:-84515970 None:intergenic
ATTTGTTTGGATCCATTACA+TGG 0.493004 3_3:+84520017 Msa0479510:CDS
CTCCCATTACCACGAATTTG+AGG 0.493474 3_3:+84519552 Msa0479510:CDS
TAATCGGGAGACTTTGATAG+AGG 0.493948 3_3:-84518012 None:intergenic
TAAACTAGCCCTGGCTGGAA+TGG 0.494916 3_3:-84519626 None:intergenic
GTAATGGGAAATATAATGTT+CGG 0.495988 3_3:+84520041 Msa0479510:CDS
CTTGAAAAGGTTGCCACCAT+AGG 0.496364 3_3:-84518841 None:intergenic
CATACAGCGTCGACAGCAGC+AGG 0.496546 3_3:+84517221 Msa0479510:CDS
TCGTACTATGGTCTGGCAGA+AGG 0.498187 3_3:+84517263 Msa0479510:CDS
ATCACAAACTTCATTGGTAA+AGG 0.499700 3_3:+84519806 Msa0479510:CDS
TTTCATAAACTAGCCCTGGC+TGG 0.502842 3_3:-84519631 None:intergenic
AATTGAAACGGTGCAAGGGA+TGG 0.504212 3_3:+84518284 Msa0479510:CDS
GATGTGCTTTCAATCTCGCT+TGG 0.507175 3_3:+84517401 Msa0479510:CDS
ACACCATATGATTATGGAGC+AGG 0.507622 3_3:+84519584 Msa0479510:CDS
GCCATTCTTGCAGCATGGAT+TGG 0.508286 3_3:+84519047 Msa0479510:CDS
AACCAATGACAAAATTGAAA+CGG 0.510051 3_3:+84518272 Msa0479510:CDS
GACAAAATTGAAACGGTGCA+AGG 0.512959 3_3:+84518279 Msa0479510:CDS
GGAGCTTCAGAATGGGATCC+GGG 0.515401 3_3:-84515969 None:intergenic
GGAATGCTCCGATCGCAATT+GGG 0.519259 3_3:-84517460 None:intergenic
GATTTCATGTTATACGGTGA+GGG 0.522303 3_3:-84519104 None:intergenic
TGGCATCGTCGAACGCTGCA+AGG 0.523723 3_3:-84517364 None:intergenic
TTAACAACTGTACTTTGTGT+TGG 0.523726 3_3:-84517533 None:intergenic
TAAATTTAATGCTGCCTGCA+AGG 0.523751 3_3:-84519160 None:intergenic
TTGGTCTTACAACTGTTGCT+GGG 0.523862 3_3:-84518368 None:intergenic
TGGTGCTTCGTACTATGGTC+TGG 0.524052 3_3:+84517256 Msa0479510:CDS
AGATCGGCCATCATGACCTC+TGG 0.527944 3_3:+84519212 Msa0479510:CDS
TAATCTATGATTGTAACTGT+TGG 0.528667 3_3:-84518808 None:intergenic
TAAGTCAACAATAGTCGTCT+TGG 0.529263 3_3:-84518058 None:intergenic
CTAGTTTCATAAACTAGCCC+TGG 0.529301 3_3:-84519635 None:intergenic
CAAGTAGTTTAGGTAGTCAA+TGG 0.529866 3_3:-84519660 None:intergenic
CAGTTGTTAATGACGCTCCT+TGG 0.529891 3_3:+84517546 Msa0479510:CDS
AGAGGGAGAAGACTTGGAGA+AGG 0.530040 3_3:-84516049 None:intergenic
CATTCTCCAATTGAGTGATG+GGG 0.530952 3_3:-84515638 None:intergenic
GTTGTATGGAGCTTCAGAAT+GGG 0.532439 3_3:-84515976 None:intergenic
TTGTTGAATTGACATATTGG+AGG 0.533745 3_3:-84518407 None:intergenic
AAGGTTGCCACCATAGGTGC+AGG 0.534542 3_3:-84518835 None:intergenic
CCTATTCCACCTGGTTGGAA+AGG 0.536106 3_3:+84516298 Msa0479510:CDS
TGTTGTATGGAGCTTCAGAA+TGG 0.536414 3_3:-84515977 None:intergenic
CCATTGTCGATGCTCCCGAT+GGG 0.536765 3_3:+84519891 Msa0479510:CDS
GTGTTGCCATTCTTGCAGCA+TGG 0.537096 3_3:+84519042 Msa0479510:CDS
GATGTAACTGAGGTTCCAAA+AGG 0.537216 3_3:+84519074 Msa0479510:CDS
TTGCAGAGGCACTCCAAGTA+GGG 0.538678 3_3:-84519187 None:intergenic
TTAGAGAATACTAAACATGA+AGG 0.544067 3_3:+84515536 Msa0479510:exon
ATGCAGATGCCTTTCCAACC+AGG 0.544841 3_3:-84516307 None:intergenic
TGCTGTGGAGTGCGGCATAG+TGG 0.547506 3_3:+84517484 Msa0479510:CDS
ACAACGGAACCATTCCAGCC+AGG 0.547930 3_3:+84519617 Msa0479510:CDS
GTTGGTAGAATTGTTGCCAC+CGG 0.548002 3_3:-84518790 None:intergenic
TTAACACCGTGTTTAAAACA+TGG 0.549023 3_3:-84515731 None:intergenic
GGAAAGATTGTCATCTGTGA+TGG 0.549315 3_3:+84518231 Msa0479510:CDS
AATGAAGTTTGTGATTGCTA+TGG 0.549498 3_3:-84519798 None:intergenic
AACTCAAATTAACAATATGA+AGG 0.549735 3_3:+84519529 Msa0479510:CDS
AACTCAATAGCTCAACAACC+TGG 0.550625 3_3:+84515931 Msa0479510:CDS
ACAAAATTGAAACGGTGCAA+GGG 0.550943 3_3:+84518280 Msa0479510:CDS
GGCAATTGACCTCAAATTCG+TGG 0.551079 3_3:-84519561 None:intergenic
TTCTCCAATTGAGTGATGGG+GGG 0.551248 3_3:-84515636 None:intergenic
AATATTAGTATCAATAAGAG+TGG 0.552099 3_3:-84515564 None:intergenic
TTCGACGATGCCATTTCCGA+TGG 0.553569 3_3:+84517374 Msa0479510:CDS
ATATTTCTTGAAAGCGCTGA+AGG 0.554068 3_3:-84518871 None:intergenic
ATTGAAACGGTGCAAGGGAT+GGG 0.554707 3_3:+84518285 Msa0479510:CDS
TAGCCTGATATTGCAGCACC+AGG 0.555710 3_3:+84519020 Msa0479510:intron
CCTGCAAGGCCTGAAACATG+TGG 0.556564 3_3:-84519146 None:intergenic
CTGTGGTAGCATTTGCACCA+GGG 0.557512 3_3:-84517163 None:intergenic
TGTCACAAACGTTGGTGAAG+AGG 0.558206 3_3:+84519850 Msa0479510:CDS
ATTCTCCAATTGAGTGATGG+GGG 0.560258 3_3:-84515637 None:intergenic
AACACGGTAAGGGATACATA+TGG 0.560843 3_3:+84517188 Msa0479510:CDS
CTTGTTCATATTATTGACCA+AGG 0.561403 3_3:+84518318 Msa0479510:CDS
TGATTTCATGTTATACGGTG+AGG 0.563336 3_3:-84519105 None:intergenic
TGGGTCCTATTCCACCTGGT+TGG 0.563836 3_3:+84516293 Msa0479510:CDS
CATATCACGATCGATGGTAG+TGG 0.566936 3_3:-84517585 None:intergenic
GCATTCCATGCTGTGGAGTG+CGG 0.567220 3_3:+84517476 Msa0479510:CDS
TAACACCGTGTTTAAAACAT+GGG 0.567352 3_3:-84515730 None:intergenic
CGTACTATGGTCTGGCAGAA+GGG 0.569087 3_3:+84517264 Msa0479510:CDS
AATTACGATGTCTGATGAAG+AGG 0.571232 3_3:-84516067 None:intergenic
ATCGGGAGACTTTGATAGAG+GGG 0.577600 3_3:-84518010 None:intergenic
ATTGCAGAGGCACTCCAAGT+AGG 0.578761 3_3:-84519188 None:intergenic
GGGAAGACAGACACAACTCC+AGG 0.579976 3_3:-84515949 None:intergenic
AATCGGGAGACTTTGATAGA+GGG 0.580413 3_3:-84518011 None:intergenic
CTCGTACACAATTACAAACA+CGG 0.586425 3_3:+84515868 Msa0479510:CDS
AATCGCTAACCTCGCTTCAG+GGG 0.590362 3_3:-84517303 None:intergenic
ATTACGATGTCTGATGAAGA+GGG 0.590536 3_3:-84516066 None:intergenic
TGAAACATGTGGGCATGACA+TGG 0.590854 3_3:-84519135 None:intergenic
CAACGGAACCATTCCAGCCA+GGG 0.592209 3_3:+84519618 Msa0479510:CDS
TTAGGAAGATAATCGGAGCA+AGG 0.595352 3_3:+84517129 Msa0479510:intron
GCAGAAGGGACAGCAAAAGG+TGG 0.596007 3_3:+84517278 Msa0479510:CDS
AGTCTAACCAGAGGTCATGA+TGG 0.597164 3_3:-84519219 None:intergenic
TCTCCAATTGAGTGATGGGG+GGG 0.598368 3_3:-84515635 None:intergenic
CAAGTTTATATTGTGTACAT+GGG 0.599634 3_3:+84515666 Msa0479510:CDS
TGAAAGCACATCTACTCCAT+CGG 0.602949 3_3:-84517390 None:intergenic
GCTACTACCTAAGACAACGT+TGG 0.603357 3_3:-84517612 None:intergenic
TTATAAGCCTGCACCTATGG+TGG 0.604912 3_3:+84518828 Msa0479510:CDS
TATTATTGACCAAGGAGCAG+AGG 0.606444 3_3:+84518326 Msa0479510:CDS
TTGTTGACTTAGCTGAAGCA+AGG 0.611506 3_3:+84518070 Msa0479510:CDS
TAGAGAATACTAAACATGAA+GGG 0.617611 3_3:+84515537 Msa0479510:exon
GCTGCAACAGTTAATATCCA+AGG 0.622492 3_3:-84517563 None:intergenic
TGATAGTTTCAACTGCCCCA+AGG 0.625168 3_3:+84519736 Msa0479510:CDS
ATCCCTTACCGTGTTTGCTG+TGG 0.626261 3_3:-84517180 None:intergenic
GCAGTTGAAACTATCAGGGA+CGG 0.626916 3_3:-84519729 None:intergenic
TACCACAGCAAACACGGTAA+GGG 0.627495 3_3:+84517178 Msa0479510:CDS
CTATGCCGCACTCCACAGCA+TGG 0.629403 3_3:-84517481 None:intergenic
AAATGCTACCACAGCAAACA+CGG 0.629472 3_3:+84517172 Msa0479510:CDS
GGAATGGGTCCTATTCCACC+TGG 0.630491 3_3:+84516289 Msa0479510:CDS
CACCGTATAACATGAAATCA+GGG 0.630643 3_3:+84519108 Msa0479510:CDS
TGGGGCAGTTGAAACTATCA+GGG 0.632412 3_3:-84519733 None:intergenic
GAAACGGTGCAAGGGATGGG+TGG 0.636122 3_3:+84518288 Msa0479510:CDS
ATCCCAGAGCCATAACAGGA+AGG 0.636901 3_3:-84517341 None:intergenic
CAGAAGGGACAGCAAAAGGT+GGG 0.637755 3_3:+84517279 Msa0479510:CDS
ATTGACATATTGGAGGATTG+TGG 0.637845 3_3:-84518400 None:intergenic
CCCATCGGGAGCATCGACAA+TGG 0.639676 3_3:-84519891 None:intergenic
GTAAGGGATACATATGGACA+TGG 0.641842 3_3:+84517194 Msa0479510:CDS
ATTAATTTGAAGCAATCCGG+TGG 0.643428 3_3:+84518774 Msa0479510:intron
TGCTCCATAATCATATGGTG+TGG 0.643902 3_3:-84519582 None:intergenic
ACGACAGACCCAATTGCGAT+CGG 0.644529 3_3:+84517452 Msa0479510:CDS
GCTGCAAGAATGGCAACACC+TGG 0.647294 3_3:-84519038 None:intergenic
GGTCTGTCGTCAAGTCTGGT+CGG 0.647527 3_3:-84517439 None:intergenic
GATCGGAGCATTCCATGCTG+TGG 0.648403 3_3:+84517469 Msa0479510:CDS
CTGCAAGGCCTGAAACATGT+GGG 0.652805 3_3:-84519145 None:intergenic
GAGTGCCTCTGCAATCAGAT+CGG 0.653229 3_3:+84519196 Msa0479510:CDS
AAGGTGGGTCCCCTGAAGCG+AGG 0.662550 3_3:+84517294 Msa0479510:CDS
GGACTGCATATCACGATCGA+TGG 0.664782 3_3:-84517591 None:intergenic
TCCAATATGTCAATTCAACA+AGG 0.665015 3_3:+84518409 Msa0479510:CDS
AGGTAGTAGCAAAGTTATCG+AGG 0.666458 3_3:+84517625 Msa0479510:CDS
GATGGCCGATCTGATTGCAG+AGG 0.667988 3_3:-84519201 None:intergenic
GATCAATAGTTGAATCCTTG+GGG 0.677090 3_3:-84519751 None:intergenic
GCAAGGTATTACCCTAACCC+TGG 0.678267 3_3:+84517146 Msa0479510:CDS
CAGATGCCTTTCCAACCAGG+TGG 0.680523 3_3:-84516304 None:intergenic
AGCAGGAGAAATAACAACAA+CGG 0.683521 3_3:+84519601 Msa0479510:CDS
AGCAGAATTGTCACAAACGT+TGG 0.689218 3_3:+84519842 Msa0479510:CDS
CATTGTCGATGCTCCCGATG+GGG 0.697712 3_3:+84519892 Msa0479510:CDS
ATACAGCGTCGACAGCAGCA+GGG 0.699819 3_3:+84517222 Msa0479510:CDS
TAAGGGATACATATGGACAT+GGG 0.700951 3_3:+84517195 Msa0479510:CDS
CATAGGATTGAATACAACCA+CGG 0.705724 3_3:+84519688 Msa0479510:CDS
TTTGGAGATAATCTTCACCG+TGG 0.706380 3_3:-84519705 None:intergenic
GATTGGTAATGATGTAACTG+AGG 0.710188 3_3:+84519064 Msa0479510:CDS
TGTTGGTCCATCATTCCCAG+CGG 0.719043 3_3:-84517516 None:intergenic
GCAGCAGGGAATGTTGTGAG+TGG 0.724482 3_3:+84517236 Msa0479510:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAAATTGAATTTTATGTTT+TGG + chr3_3:84516528-84516547 Msa0479510:intron 10.0%
!!! TAAATTGAATTTTATGTTTT+GGG + chr3_3:84516529-84516548 Msa0479510:intron 10.0%
!! TAAAAATGAAAATAAAATCA+TGG - chr3_3:84517112-84517131 None:intergenic 10.0%
!!! ATGATTTTATTTTCATTTTT+AGG + chr3_3:84517111-84517130 Msa0479510:intron 10.0%
!! AAAAAGAAAAATCTTAAAAT+TGG - chr3_3:84517681-84517700 None:intergenic 10.0%
!! ATTCAATTACAATAATTTAT+AGG - chr3_3:84517904-84517923 None:intergenic 10.0%
!!! TAATTTTATGCATATTTATT+TGG - chr3_3:84518494-84518513 None:intergenic 10.0%
!! AATGATGTGAATTATTTATA+AGG + chr3_3:84515833-84515852 Msa0479510:intron 15.0%
!! ATTATTTATAAGGAATGAAA+AGG + chr3_3:84515843-84515862 Msa0479510:intron 15.0%
!! ATATACTTTAATTCATGATA+AGG - chr3_3:84516197-84516216 None:intergenic 15.0%
!! AATTAGTTAATTCATTGTTA+TGG - chr3_3:84518113-84518132 None:intergenic 15.0%
!! TATTCATATCTAATGAATTT+GGG - chr3_3:84518203-84518222 None:intergenic 15.0%
!! TTATTCATATCTAATGAATT+TGG - chr3_3:84518204-84518223 None:intergenic 15.0%
!! TTAGATATGAATAAAGTTAA+AGG + chr3_3:84518210-84518229 Msa0479510:CDS 15.0%
!! TATACAAAGAAATAAAACTT+AGG + chr3_3:84519359-84519378 Msa0479510:intron 15.0%
!! AATATTAGTATCAATAAGAG+TGG - chr3_3:84515567-84515586 None:intergenic 20.0%
!!! TTAATAATGAGTTGTTATTC+AGG + chr3_3:84516232-84516251 Msa0479510:intron 20.0%
!! TTAATTTACCACCAAAAAAA+AGG + chr3_3:84516682-84516701 Msa0479510:intron 20.0%
!! CAAAATTAGGAAAATCTTTA+TGG - chr3_3:84516733-84516752 None:intergenic 20.0%
!!! CTATGTTTACTTTATTTGTT+TGG + chr3_3:84517067-84517086 Msa0479510:intron 20.0%
!!! TTCATTTTTAGGAAGATAAT+CGG + chr3_3:84517122-84517141 Msa0479510:intron 20.0%
!! GTAATTGAATATTTGAGTAA+AGG + chr3_3:84517914-84517933 Msa0479510:intron 20.0%
!!! TATTATTGTTTGTTAAATGC+AGG + chr3_3:84518169-84518188 Msa0479510:intron 20.0%
!!! AAAATTAATTTGAAGCAATC+CGG + chr3_3:84518771-84518790 Msa0479510:intron 20.0%
!! GCATTTATAAAAATAGAACA+TGG - chr3_3:84519506-84519525 None:intergenic 20.0%
!! AACTCAAATTAACAATATGA+AGG + chr3_3:84519529-84519548 Msa0479510:CDS 20.0%
! TTAGAGAATACTAAACATGA+AGG + chr3_3:84515536-84515555 Msa0479510:exon 25.0%
! TAGAGAATACTAAACATGAA+GGG + chr3_3:84515537-84515556 Msa0479510:exon 25.0%
! ACAAGTTTATATTGTGTACA+TGG + chr3_3:84515665-84515684 Msa0479510:CDS 25.0%
! CAAGTTTATATTGTGTACAT+GGG + chr3_3:84515666-84515685 Msa0479510:CDS 25.0%
! ATAATTAACCTGTATCTAAC+AGG - chr3_3:84516095-84516114 None:intergenic 25.0%
!! TTTTCTTTACCTATTACAGT+TGG - chr3_3:84516356-84516375 None:intergenic 25.0%
!!! TTGCTTTTCACATTTTTGTT+GGG - chr3_3:84516385-84516404 None:intergenic 25.0%
!!! TTTGCTTTTCACATTTTTGT+TGG - chr3_3:84516386-84516405 None:intergenic 25.0%
! AAAATGTGAAAAGCAAAGAA+AGG + chr3_3:84516389-84516408 Msa0479510:intron 25.0%
! TCATTATCATGTAAGAACAA+AGG + chr3_3:84516433-84516452 Msa0479510:intron 25.0%
!! TATGAGTTTTGCCTTTTTTT+TGG - chr3_3:84516696-84516715 None:intergenic 25.0%
! TTGTAAAAACCTACAATGTT+TGG + chr3_3:84516813-84516832 Msa0479510:intron 25.0%
! TGATTATTTCCAAACATTGT+AGG - chr3_3:84516825-84516844 None:intergenic 25.0%
!!! ATAATCACTGGAACTTTTTT+TGG + chr3_3:84516838-84516857 Msa0479510:intron 25.0%
!! CTAATTTTGTCCAGTTTAAT+CGG - chr3_3:84516902-84516921 None:intergenic 25.0%
! TCTAACATGTAAGTTTCATT+TGG - chr3_3:84517029-84517048 None:intergenic 25.0%
! TTTATTTGTTTGGTCCATTA+CGG + chr3_3:84517077-84517096 Msa0479510:intron 25.0%
!!! TTTGCTCTATACTTTTGAAA+GGG + chr3_3:84517717-84517736 Msa0479510:intron 25.0%
! AACCAATGACAAAATTGAAA+CGG + chr3_3:84518272-84518291 Msa0479510:CDS 25.0%
! TTAAAACTTTCTCATGTCTA+AGG + chr3_3:84518613-84518632 Msa0479510:intron 25.0%
! TAATCTATGATTGTAACTGT+TGG - chr3_3:84518811-84518830 None:intergenic 25.0%
! TTAAATTTAAACACCCTACT+TGG + chr3_3:84519174-84519193 Msa0479510:CDS 25.0%
! ATAAACCAAACCATTCAAAT+TGG + chr3_3:84519409-84519428 Msa0479510:intron 25.0%
! ATAAATAACGCCAATTTGAA+TGG - chr3_3:84519422-84519441 None:intergenic 25.0%
! TTTGTAAACTCTAATTTCTC+TGG - chr3_3:84519935-84519954 None:intergenic 25.0%
! AAGTAGAGGAGAAAATAATT+TGG - chr3_3:84519979-84519998 None:intergenic 25.0%
!!! AACAAATCTTCTTTTAGAGA+GGG - chr3_3:84520004-84520023 None:intergenic 25.0%
!!! AAACAAATCTTCTTTTAGAG+AGG - chr3_3:84520005-84520024 None:intergenic 25.0%
!! TCTCTAAAAGAAGATTTGTT+TGG + chr3_3:84520004-84520023 Msa0479510:CDS 25.0%
!! GTAATGGGAAATATAATGTT+CGG + chr3_3:84520041-84520060 Msa0479510:CDS 25.0%
!! TACTCTCACTTCATTTTTCT+TGG + chr3_3:84515588-84515607 Msa0479510:CDS 30.0%
!! TCATACCCATGTTTTAAACA+CGG + chr3_3:84515725-84515744 Msa0479510:CDS 30.0%
! TAACACCGTGTTTAAAACAT+GGG - chr3_3:84515733-84515752 None:intergenic 30.0%
! TTAACACCGTGTTTAAAACA+TGG - chr3_3:84515734-84515753 None:intergenic 30.0%
!! TTTTAAACACGGTGTTAAGA+AGG + chr3_3:84515736-84515755 Msa0479510:CDS 30.0%
! TGAGTTGTTATTCAGGTATA+TGG + chr3_3:84516239-84516258 Msa0479510:intron 30.0%
TCAATTCATCCAACTGTAAT+AGG + chr3_3:84516344-84516363 Msa0479510:CDS 30.0%
! TGCTTTTCACATTTTTGTTG+GGG - chr3_3:84516384-84516403 None:intergenic 30.0%
TGTTGAAAGGATAAGATTTC+TGG - chr3_3:84516475-84516494 None:intergenic 30.0%
!!! GGAATTTTGTTGTTGTTGAA+AGG - chr3_3:84516488-84516507 None:intergenic 30.0%
ACTGTTGTGAATCATATTTC+TGG - chr3_3:84516509-84516528 None:intergenic 30.0%
! TCCTAATTTTGAATCACTCA+AGG + chr3_3:84516742-84516761 Msa0479510:intron 30.0%
TCCTTGAGTGATTCAAAATT+AGG - chr3_3:84516746-84516765 None:intergenic 30.0%
CAATGTTTGGAAATAATCAC+TGG + chr3_3:84516826-84516845 Msa0479510:intron 30.0%
CGATTAAACTGGACAAAATT+AGG + chr3_3:84516900-84516919 Msa0479510:intron 30.0%
AGTAAACATAGATAGACAGA+AGG - chr3_3:84517058-84517077 None:intergenic 30.0%
TTAACAACTGTACTTTGTGT+TGG - chr3_3:84517536-84517555 None:intergenic 30.0%
! TTCAAAAGTATAGAGCAAAG+TGG - chr3_3:84517716-84517735 None:intergenic 30.0%
! CTTTGCTCTATACTTTTGAA+AGG + chr3_3:84517716-84517735 Msa0479510:intron 30.0%
!! TGGTTTTCATTTTTGTTGGT+TGG - chr3_3:84517766-84517785 None:intergenic 30.0%
!!! CTGTTGGTTTTCATTTTTGT+TGG - chr3_3:84517770-84517789 None:intergenic 30.0%
!!! GGATTTGTTTTTGGTAAAAG+AGG + chr3_3:84517864-84517883 Msa0479510:intron 30.0%
! TTTGGTAATTGTTATTCTCC+AGG + chr3_3:84517969-84517988 Msa0479510:intron 30.0%
! TTGGTAATTGTTATTCTCCA+GGG + chr3_3:84517970-84517989 Msa0479510:intron 30.0%
CTTGTTCATATTATTGACCA+AGG + chr3_3:84518318-84518337 Msa0479510:CDS 30.0%
TTGTTGAATTGACATATTGG+AGG - chr3_3:84518410-84518429 None:intergenic 30.0%
TCCAATATGTCAATTCAACA+AGG + chr3_3:84518409-84518428 Msa0479510:CDS 30.0%
ACCTTGTTGAATTGACATAT+TGG - chr3_3:84518413-84518432 None:intergenic 30.0%
TGTCTAAGGACAAAAAAACT+TGG + chr3_3:84518627-84518646 Msa0479510:intron 30.0%
! TTCTTTCCGTTTGAAATCAA+CGG + chr3_3:84518707-84518726 Msa0479510:intron 30.0%
! ATTGACCACATTGATCTTTT+AGG + chr3_3:84519330-84519349 Msa0479510:intron 30.0%
! ATCTAGGATTGCATTACTTA+AGG - chr3_3:84519462-84519481 None:intergenic 30.0%
GCTAGATAGATATCATATCT+AGG - chr3_3:84519478-84519497 None:intergenic 30.0%
CTATGTAACACAAGTAGTTT+AGG - chr3_3:84519673-84519692 None:intergenic 30.0%
CTAAACTACTTGTGTTACAT+AGG + chr3_3:84519671-84519690 Msa0479510:CDS 30.0%
TGATCAATAGTTGAATCCTT+GGG - chr3_3:84519755-84519774 None:intergenic 30.0%
ATGATCAATAGTTGAATCCT+TGG - chr3_3:84519756-84519775 None:intergenic 30.0%
AATGAAGTTTGTGATTGCTA+TGG - chr3_3:84519801-84519820 None:intergenic 30.0%
ATAGCAATCACAAACTTCAT+TGG + chr3_3:84519800-84519819 Msa0479510:CDS 30.0%
ATCACAAACTTCATTGGTAA+AGG + chr3_3:84519806-84519825 Msa0479510:CDS 30.0%
ATTTGTTTGGATCCATTACA+TGG + chr3_3:84520017-84520036 Msa0479510:CDS 30.0%
TCATTCTCCAATTGAGTGAT+GGG - chr3_3:84515642-84515661 None:intergenic 35.0%
! ATGGGTATGATCTTTTCGAA+GGG - chr3_3:84515715-84515734 None:intergenic 35.0%
CTCGTACACAATTACAAACA+CGG + chr3_3:84515868-84515887 Msa0479510:CDS 35.0%
AATTACAAACACGGATTCTC+AGG + chr3_3:84515877-84515896 Msa0479510:CDS 35.0%
AATTCCAAGAACGTGTTGTA+TGG - chr3_3:84515993-84516012 None:intergenic 35.0%
ATTACGATGTCTGATGAAGA+GGG - chr3_3:84516069-84516088 None:intergenic 35.0%
AATTACGATGTCTGATGAAG+AGG - chr3_3:84516070-84516089 None:intergenic 35.0%
TCTTCATCAGACATCGTAAT+TGG + chr3_3:84516069-84516088 Msa0479510:CDS 35.0%
!! AAGTTTTTCAGACAAGGGAA+TGG + chr3_3:84516273-84516292 Msa0479510:CDS 35.0%
!! AGTTTTTCAGACAAGGGAAT+GGG + chr3_3:84516274-84516293 Msa0479510:CDS 35.0%
! TTCACATTTTTGTTGGGGAT+TGG - chr3_3:84516379-84516398 None:intergenic 35.0%
!!! GAGTTTTGCCTTTTTTTTGG+TGG - chr3_3:84516693-84516712 None:intergenic 35.0%
GTCCTTAAGAATTTCAAGCA+CGG - chr3_3:84516778-84516797 None:intergenic 35.0%
AAGTGTCAATCCGATTAAAC+TGG + chr3_3:84516889-84516908 Msa0479510:intron 35.0%
CATGGAAATTGTTACCGTAA+TGG - chr3_3:84517094-84517113 None:intergenic 35.0%
TAAGGGATACATATGGACAT+GGG + chr3_3:84517195-84517214 Msa0479510:CDS 35.0%
!! CTTGGTTGTTTCTTTACTGT+TGG - chr3_3:84517786-84517805 None:intergenic 35.0%
AAGTCTCAATTTCTCTGTCT+TGG - chr3_3:84517804-84517823 None:intergenic 35.0%
!! CTAGCAGTTGGATTTGTTTT+TGG + chr3_3:84517855-84517874 Msa0479510:intron 35.0%
TGATAGAGGGGAGAAATTTA+TGG - chr3_3:84518001-84518020 None:intergenic 35.0%
TCCGGTTATCAATGGATAAT+CGG - chr3_3:84518031-84518050 None:intergenic 35.0%
TAAGTCAACAATAGTCGTCT+TGG - chr3_3:84518061-84518080 None:intergenic 35.0%
! CACCGTTTCAATTTTGTCAT+TGG - chr3_3:84518277-84518296 None:intergenic 35.0%
ACAAAATTGAAACGGTGCAA+GGG + chr3_3:84518280-84518299 Msa0479510:CDS 35.0%
ATTGACATATTGGAGGATTG+TGG - chr3_3:84518403-84518422 None:intergenic 35.0%
! TCTTTCCGTTTGAAATCAAC+GGG + chr3_3:84518708-84518727 Msa0479510:intron 35.0%
! ATTAATTTGAAGCAATCCGG+TGG + chr3_3:84518774-84518793 Msa0479510:intron 35.0%
!! ATATTTCTTGAAAGCGCTGA+AGG - chr3_3:84518874-84518893 None:intergenic 35.0%
!! GATTGGTAATGATGTAACTG+AGG + chr3_3:84519064-84519083 Msa0479510:CDS 35.0%
GATTTCATGTTATACGGTGA+GGG - chr3_3:84519107-84519126 None:intergenic 35.0%
TGATTTCATGTTATACGGTG+AGG - chr3_3:84519108-84519127 None:intergenic 35.0%
TCACCGTATAACATGAAATC+AGG + chr3_3:84519107-84519126 Msa0479510:CDS 35.0%
CACCGTATAACATGAAATCA+GGG + chr3_3:84519108-84519127 Msa0479510:CDS 35.0%
GTCCCTGATTTCATGTTATA+CGG - chr3_3:84519113-84519132 None:intergenic 35.0%
TAAATTTAATGCTGCCTGCA+AGG - chr3_3:84519163-84519182 None:intergenic 35.0%
AATGTGAAAAGTCTAACCAG+AGG - chr3_3:84519231-84519250 None:intergenic 35.0%
ATCGACCTAAAAGATCAATG+TGG - chr3_3:84519338-84519357 None:intergenic 35.0%
TAACGCCAATTTGAATGGTT+TGG - chr3_3:84519417-84519436 None:intergenic 35.0%
ATTGCCACACCATATGATTA+TGG + chr3_3:84519578-84519597 Msa0479510:CDS 35.0%
AGCAGGAGAAATAACAACAA+CGG + chr3_3:84519601-84519620 Msa0479510:CDS 35.0%
CAAGTAGTTTAGGTAGTCAA+TGG - chr3_3:84519663-84519682 None:intergenic 35.0%
CATAGGATTGAATACAACCA+CGG + chr3_3:84519688-84519707 Msa0479510:CDS 35.0%
GATCAATAGTTGAATCCTTG+GGG - chr3_3:84519754-84519773 None:intergenic 35.0%
!! CTAATTTCTCTGGAATCAAC+TGG - chr3_3:84519925-84519944 None:intergenic 35.0%
GATCCATTACATGGAGTAAT+GGG + chr3_3:84520026-84520045 Msa0479510:CDS 35.0%
TTTCCCATTACTCCATGTAA+TGG - chr3_3:84520032-84520051 None:intergenic 35.0%
ATTCTCCAATTGAGTGATGG+GGG - chr3_3:84515640-84515659 None:intergenic 40.0%
CATTCTCCAATTGAGTGATG+GGG - chr3_3:84515641-84515660 None:intergenic 40.0%
GTCATTCTCCAATTGAGTGA+TGG - chr3_3:84515643-84515662 None:intergenic 40.0%
! CATGGGTATGATCTTTTCGA+AGG - chr3_3:84515716-84515735 None:intergenic 40.0%
AACTCAATAGCTCAACAACC+TGG + chr3_3:84515931-84515950 Msa0479510:CDS 40.0%
GTTGTATGGAGCTTCAGAAT+GGG - chr3_3:84515979-84515998 None:intergenic 40.0%
TGTTGTATGGAGCTTCAGAA+TGG - chr3_3:84515980-84515999 None:intergenic 40.0%
TAGCGTAAGTTTGCGTTTCA+AGG - chr3_3:84516017-84516036 None:intergenic 40.0%
! GTAATTGGCCTGTTAGATAC+AGG + chr3_3:84516084-84516103 Msa0479510:CDS 40.0%
!! TCTGAAAAACTTGCTGCTTC+TGG - chr3_3:84516265-84516284 None:intergenic 40.0%
!! AGCAGCAAGTTTTTCAGACA+AGG + chr3_3:84516267-84516286 Msa0479510:CDS 40.0%
!! GCAGCAAGTTTTTCAGACAA+GGG + chr3_3:84516268-84516287 Msa0479510:CDS 40.0%
GACCGTGCTTGAAATTCTTA+AGG + chr3_3:84516773-84516792 Msa0479510:intron 40.0%
TTAGGAAGATAATCGGAGCA+AGG + chr3_3:84517129-84517148 Msa0479510:intron 40.0%
AAATGCTACCACAGCAAACA+CGG + chr3_3:84517172-84517191 Msa0479510:CDS 40.0%
AACACGGTAAGGGATACATA+TGG + chr3_3:84517188-84517207 Msa0479510:CDS 40.0%
GTAAGGGATACATATGGACA+TGG + chr3_3:84517194-84517213 Msa0479510:CDS 40.0%
! TGAAAGCACATCTACTCCAT+CGG - chr3_3:84517393-84517412 None:intergenic 40.0%
GCTGCAACAGTTAATATCCA+AGG - chr3_3:84517566-84517585 None:intergenic 40.0%
AGGTAGTAGCAAAGTTATCG+AGG + chr3_3:84517625-84517644 Msa0479510:CDS 40.0%
AATCCAACTGCTAGTTGACA+GGG - chr3_3:84517849-84517868 None:intergenic 40.0%
AAATCCAACTGCTAGTTGAC+AGG - chr3_3:84517850-84517869 None:intergenic 40.0%
! AGAAATTTATGGCTTTGCCC+TGG - chr3_3:84517990-84518009 None:intergenic 40.0%
AATCGGGAGACTTTGATAGA+GGG - chr3_3:84518014-84518033 None:intergenic 40.0%
TAATCGGGAGACTTTGATAG+AGG - chr3_3:84518015-84518034 None:intergenic 40.0%
CCGGTTATCAATGGATAATC+GGG - chr3_3:84518030-84518049 None:intergenic 40.0%
! CCCGATTATCCATTGATAAC+CGG + chr3_3:84518027-84518046 Msa0479510:CDS 40.0%
!! TTGTTGACTTAGCTGAAGCA+AGG + chr3_3:84518070-84518089 Msa0479510:CDS 40.0%
GGAAAGATTGTCATCTGTGA+TGG + chr3_3:84518231-84518250 Msa0479510:CDS 40.0%
GACAAAATTGAAACGGTGCA+AGG + chr3_3:84518279-84518298 Msa0479510:CDS 40.0%
TATTATTGACCAAGGAGCAG+AGG + chr3_3:84518326-84518345 Msa0479510:CDS 40.0%
!!! AATTTTTTGCCTCTGCTCCT+TGG - chr3_3:84518338-84518357 None:intergenic 40.0%
!! TTGGTCTTACAACTGTTGCT+GGG - chr3_3:84518371-84518390 None:intergenic 40.0%
!! TTTGGTCTTACAACTGTTGC+TGG - chr3_3:84518372-84518391 None:intergenic 40.0%
AGATTATAAGCCTGCACCTA+TGG + chr3_3:84518825-84518844 Msa0479510:CDS 40.0%
!!! TGGCAACCTTTTCAAGTAGA+GGG + chr3_3:84518848-84518867 Msa0479510:CDS 40.0%
GATGTAACTGAGGTTCCAAA+AGG + chr3_3:84519074-84519093 Msa0479510:CDS 40.0%
GACCTCAAATTCGTGGTAAT+GGG - chr3_3:84519557-84519576 None:intergenic 40.0%
TGACCTCAAATTCGTGGTAA+TGG - chr3_3:84519558-84519577 None:intergenic 40.0%
TGCTCCATAATCATATGGTG+TGG - chr3_3:84519585-84519604 None:intergenic 40.0%
ACACCATATGATTATGGAGC+AGG + chr3_3:84519584-84519603 Msa0479510:CDS 40.0%
TCTCCTGCTCCATAATCATA+TGG - chr3_3:84519590-84519609 None:intergenic 40.0%
CTAGTTTCATAAACTAGCCC+TGG - chr3_3:84519638-84519657 None:intergenic 40.0%
TTTGGAGATAATCTTCACCG+TGG - chr3_3:84519708-84519727 None:intergenic 40.0%
GACAATTCTGCTCACATTCT+TGG - chr3_3:84519834-84519853 None:intergenic 40.0%
AGCAGAATTGTCACAAACGT+TGG + chr3_3:84519842-84519861 Msa0479510:CDS 40.0%
!! TTTTAGAGAGGGCAAAGTAG+AGG - chr3_3:84519993-84520012 None:intergenic 40.0%
GGATCCATTACATGGAGTAA+TGG + chr3_3:84520025-84520044 Msa0479510:CDS 40.0%
! TTCTCCAATTGAGTGATGGG+GGG - chr3_3:84515639-84515658 None:intergenic 45.0%
AGCTCCATACAACACGTTCT+TGG + chr3_3:84515986-84516005 Msa0479510:CDS 45.0%
TGATGAAGAGGGAGAAGACT+TGG - chr3_3:84516058-84516077 None:intergenic 45.0%
TAGCATTTGCACCAGGGTTA+GGG - chr3_3:84517160-84517179 None:intergenic 45.0%
TACCACAGCAAACACGGTAA+GGG + chr3_3:84517178-84517197 Msa0479510:CDS 45.0%
AAATCGCTAACCTCGCTTCA+GGG - chr3_3:84517307-84517326 None:intergenic 45.0%
TAAATCGCTAACCTCGCTTC+AGG - chr3_3:84517308-84517327 None:intergenic 45.0%
GTGTGCTTTCCTTCCTGTTA+TGG + chr3_3:84517332-84517351 Msa0479510:CDS 45.0%
TTTCCTTCCTGTTATGGCTC+TGG + chr3_3:84517338-84517357 Msa0479510:CDS 45.0%
TTCCTTCCTGTTATGGCTCT+GGG + chr3_3:84517339-84517358 Msa0479510:CDS 45.0%
CACATCTACTCCATCGGAAA+TGG - chr3_3:84517387-84517406 None:intergenic 45.0%
GATGTGCTTTCAATCTCGCT+TGG + chr3_3:84517401-84517420 Msa0479510:CDS 45.0%
CAGTTGTTAATGACGCTCCT+TGG + chr3_3:84517546-84517565 Msa0479510:CDS 45.0%
CATATCACGATCGATGGTAG+TGG - chr3_3:84517588-84517607 None:intergenic 45.0%
ATGCAGTCCAACGTTGTCTT+AGG + chr3_3:84517605-84517624 Msa0479510:CDS 45.0%
GCTACTACCTAAGACAACGT+TGG - chr3_3:84517615-84517634 None:intergenic 45.0%
TAGTTGACAGGGACTGTGTT+TGG - chr3_3:84517838-84517857 None:intergenic 45.0%
ATGCTACATGTGCTCTCGTT+TGG + chr3_3:84517951-84517970 Msa0479510:intron 45.0%
ATCGGGAGACTTTGATAGAG+GGG - chr3_3:84518013-84518032 None:intergenic 45.0%
GCAGATTCTCCGGTTATCAA+TGG - chr3_3:84518039-84518058 None:intergenic 45.0%
AATTGAAACGGTGCAAGGGA+TGG + chr3_3:84518284-84518303 Msa0479510:CDS 45.0%
ATTGAAACGGTGCAAGGGAT+GGG + chr3_3:84518285-84518304 Msa0479510:CDS 45.0%
! AGGATTGTGGCAGCATCTTT+TGG - chr3_3:84518390-84518409 None:intergenic 45.0%
! TTCCGTTTGAAATCAACGGG+TGG + chr3_3:84518711-84518730 Msa0479510:intron 45.0%
!! TGCCACCCGTTGATTTCAAA+CGG - chr3_3:84518716-84518735 None:intergenic 45.0%
! GTTGGTAGAATTGTTGCCAC+CGG - chr3_3:84518793-84518812 None:intergenic 45.0%
TTATAAGCCTGCACCTATGG+TGG + chr3_3:84518828-84518847 Msa0479510:CDS 45.0%
CTTGAAAAGGTTGCCACCAT+AGG - chr3_3:84518844-84518863 None:intergenic 45.0%
!!! GTGGCAACCTTTTCAAGTAG+AGG + chr3_3:84518847-84518866 Msa0479510:CDS 45.0%
TGAAGGCCCTCTACTTGAAA+AGG - chr3_3:84518857-84518876 None:intergenic 45.0%
ACCAATCCATGCTGCAAGAA+TGG - chr3_3:84519051-84519070 None:intergenic 45.0%
! GGTGAGGGCTTTTTACCTTT+TGG - chr3_3:84519092-84519111 None:intergenic 45.0%
TGAAACATGTGGGCATGACA+TGG - chr3_3:84519138-84519157 None:intergenic 45.0%
ATGTCATGCCCACATGTTTC+AGG + chr3_3:84519137-84519156 Msa0479510:CDS 45.0%
AGTCTAACCAGAGGTCATGA+TGG - chr3_3:84519222-84519241 None:intergenic 45.0%
CTCCCATTACCACGAATTTG+AGG + chr3_3:84519552-84519571 Msa0479510:CDS 45.0%
GGCAATTGACCTCAAATTCG+TGG - chr3_3:84519564-84519583 None:intergenic 45.0%
TTTCATAAACTAGCCCTGGC+TGG - chr3_3:84519634-84519653 None:intergenic 45.0%
! GAAACTATCAGGGACGGTTT+TGG - chr3_3:84519726-84519745 None:intergenic 45.0%
GCAGTTGAAACTATCAGGGA+CGG - chr3_3:84519732-84519751 None:intergenic 45.0%
TGGGGCAGTTGAAACTATCA+GGG - chr3_3:84519736-84519755 None:intergenic 45.0%
TTGGGGCAGTTGAAACTATC+AGG - chr3_3:84519737-84519756 None:intergenic 45.0%
TGATAGTTTCAACTGCCCCA+AGG + chr3_3:84519736-84519755 Msa0479510:CDS 45.0%
! TGTCACAAACGTTGGTGAAG+AGG + chr3_3:84519850-84519869 Msa0479510:CDS 45.0%
! AACTGGATTTTCACCCCATC+GGG - chr3_3:84519908-84519927 None:intergenic 45.0%
! CAACTGGATTTTCACCCCAT+CGG - chr3_3:84519909-84519928 None:intergenic 45.0%
!!! AAATATATCTTTTATTAATA+AGG - chr3_3:84516648-84516667 None:intergenic 5.0%
!!! TTAAAATTTTATATTTGTTT+TGG - chr3_3:84516978-84516997 None:intergenic 5.0%
!!! AACAAATATAAAATTTTAAT+TGG + chr3_3:84516979-84516998 Msa0479510:intron 5.0%
! TCTCCAATTGAGTGATGGGG+GGG - chr3_3:84515638-84515657 None:intergenic 50.0%
TGGAGTTGTGTCTGTCTTCC+CGG + chr3_3:84515951-84515970 Msa0479510:CDS 50.0%
TGGAGCTTCAGAATGGGATC+CGG - chr3_3:84515973-84515992 None:intergenic 50.0%
AGAGGGAGAAGACTTGGAGA+AGG - chr3_3:84516052-84516071 None:intergenic 50.0%
CCTTTCCAACCAGGTGGAAT+AGG - chr3_3:84516301-84516320 None:intergenic 50.0%
CCTATTCCACCTGGTTGGAA+AGG + chr3_3:84516298-84516317 Msa0479510:CDS 50.0%
ATGCAGATGCCTTTCCAACC+AGG - chr3_3:84516310-84516329 None:intergenic 50.0%
! GCAAGGTATTACCCTAACCC+TGG + chr3_3:84517146-84517165 Msa0479510:CDS 50.0%
GTAGCATTTGCACCAGGGTT+AGG - chr3_3:84517161-84517180 None:intergenic 50.0%
CTGTGGTAGCATTTGCACCA+GGG - chr3_3:84517166-84517185 None:intergenic 50.0%
CTACCACAGCAAACACGGTA+AGG + chr3_3:84517177-84517196 Msa0479510:CDS 50.0%
! ATCCCTTACCGTGTTTGCTG+TGG - chr3_3:84517183-84517202 None:intergenic 50.0%
GTGAGTGGTGCTTCGTACTA+TGG + chr3_3:84517251-84517270 Msa0479510:CDS 50.0%
TGGTGCTTCGTACTATGGTC+TGG + chr3_3:84517256-84517275 Msa0479510:CDS 50.0%
TCGTACTATGGTCTGGCAGA+AGG + chr3_3:84517263-84517282 Msa0479510:CDS 50.0%
CGTACTATGGTCTGGCAGAA+GGG + chr3_3:84517264-84517283 Msa0479510:CDS 50.0%
CAGAAGGGACAGCAAAAGGT+GGG + chr3_3:84517279-84517298 Msa0479510:CDS 50.0%
AATCGCTAACCTCGCTTCAG+GGG - chr3_3:84517306-84517325 None:intergenic 50.0%
ATCCCAGAGCCATAACAGGA+AGG - chr3_3:84517344-84517363 None:intergenic 50.0%
AAGGATCCCAGAGCCATAAC+AGG - chr3_3:84517348-84517367 None:intergenic 50.0%
! TTCGACGATGCCATTTCCGA+TGG + chr3_3:84517374-84517393 Msa0479510:CDS 50.0%
ATTGGGTCTGTCGTCAAGTC+TGG - chr3_3:84517446-84517465 None:intergenic 50.0%
ACGACAGACCCAATTGCGAT+CGG + chr3_3:84517452-84517471 Msa0479510:CDS 50.0%
GGAATGCTCCGATCGCAATT+GGG - chr3_3:84517463-84517482 None:intergenic 50.0%
TGGAATGCTCCGATCGCAAT+TGG - chr3_3:84517464-84517483 None:intergenic 50.0%
ATAGTGGTTGTTTGCTCCGC+TGG + chr3_3:84517500-84517519 Msa0479510:CDS 50.0%
TAGTGGTTGTTTGCTCCGCT+GGG + chr3_3:84517501-84517520 Msa0479510:CDS 50.0%
TGTTGGTCCATCATTCCCAG+CGG - chr3_3:84517519-84517538 None:intergenic 50.0%
GGACTGCATATCACGATCGA+TGG - chr3_3:84517594-84517613 None:intergenic 50.0%
! GGACTGTGTTTGGAGTTGTG+TGG - chr3_3:84517828-84517847 None:intergenic 50.0%
AGTCCCTGTCAACTAGCAGT+TGG + chr3_3:84517843-84517862 Msa0479510:intron 50.0%
AGTCGTCTTGGCAGATTCTC+CGG - chr3_3:84518049-84518068 None:intergenic 50.0%
TAGCCTGATATTGCAGCACC+AGG + chr3_3:84519020-84519039 Msa0479510:intron 50.0%
!! ACACCTGGTGCTGCAATATC+AGG - chr3_3:84519026-84519045 None:intergenic 50.0%
GTGTTGCCATTCTTGCAGCA+TGG + chr3_3:84519042-84519061 Msa0479510:CDS 50.0%
GCCATTCTTGCAGCATGGAT+TGG + chr3_3:84519047-84519066 Msa0479510:CDS 50.0%
CTGCAAGGCCTGAAACATGT+GGG - chr3_3:84519148-84519167 None:intergenic 50.0%
!! TTGCAGAGGCACTCCAAGTA+GGG - chr3_3:84519190-84519209 None:intergenic 50.0%
!! ATTGCAGAGGCACTCCAAGT+AGG - chr3_3:84519191-84519210 None:intergenic 50.0%
GAGTGCCTCTGCAATCAGAT+CGG + chr3_3:84519196-84519215 Msa0479510:CDS 50.0%
TAAACTAGCCCTGGCTGGAA+TGG - chr3_3:84519629-84519648 None:intergenic 50.0%
TGACCCCCCCATCACTCAAT+TGG + chr3_3:84515632-84515651 Msa0479510:CDS 55.0%
GGGAAGACAGACACAACTCC+AGG - chr3_3:84515952-84515971 None:intergenic 55.0%
GGAGCTTCAGAATGGGATCC+GGG - chr3_3:84515972-84515991 None:intergenic 55.0%
GGAATGGGTCCTATTCCACC+TGG + chr3_3:84516289-84516308 Msa0479510:CDS 55.0%
TGGGTCCTATTCCACCTGGT+TGG + chr3_3:84516293-84516312 Msa0479510:CDS 55.0%
CAGATGCCTTTCCAACCAGG+TGG - chr3_3:84516307-84516326 None:intergenic 55.0%
GCTGTGGTAGCATTTGCACC+AGG - chr3_3:84517167-84517186 None:intergenic 55.0%
TGCTGCTGTCGACGCTGTAT+GGG - chr3_3:84517222-84517241 None:intergenic 55.0%
!! ATACAGCGTCGACAGCAGCA+GGG + chr3_3:84517222-84517241 Msa0479510:CDS 55.0%
GCAGCAGGGAATGTTGTGAG+TGG + chr3_3:84517236-84517255 Msa0479510:CDS 55.0%
CTGGCAGAAGGGACAGCAAA+AGG + chr3_3:84517275-84517294 Msa0479510:CDS 55.0%
GCAGAAGGGACAGCAAAAGG+TGG + chr3_3:84517278-84517297 Msa0479510:CDS 55.0%
GGTCTGTCGTCAAGTCTGGT+CGG - chr3_3:84517442-84517461 None:intergenic 55.0%
! GATCGGAGCATTCCATGCTG+TGG + chr3_3:84517469-84517488 Msa0479510:CDS 55.0%
GCATTCCATGCTGTGGAGTG+CGG + chr3_3:84517476-84517495 Msa0479510:CDS 55.0%
GTTTGCTCCGCTGGGAATGA+TGG + chr3_3:84517509-84517528 Msa0479510:CDS 55.0%
! GTGCAAGGGATGGGTGGATT+AGG + chr3_3:84518294-84518313 Msa0479510:CDS 55.0%
AAGGTTGCCACCATAGGTGC+AGG - chr3_3:84518838-84518857 None:intergenic 55.0%
GCTGCAAGAATGGCAACACC+TGG - chr3_3:84519041-84519060 None:intergenic 55.0%
CCTGCAAGGCCTGAAACATG+TGG - chr3_3:84519149-84519168 None:intergenic 55.0%
CCACATGTTTCAGGCCTTGC+AGG + chr3_3:84519146-84519165 Msa0479510:CDS 55.0%
GATGGCCGATCTGATTGCAG+AGG - chr3_3:84519204-84519223 None:intergenic 55.0%
AGATCGGCCATCATGACCTC+TGG + chr3_3:84519212-84519231 Msa0479510:CDS 55.0%
ACAACGGAACCATTCCAGCC+AGG + chr3_3:84519617-84519636 Msa0479510:CDS 55.0%
CAACGGAACCATTCCAGCCA+GGG + chr3_3:84519618-84519637 Msa0479510:CDS 55.0%
CCATTGTCGATGCTCCCGAT+GGG + chr3_3:84519891-84519910 Msa0479510:CDS 55.0%
CATTGTCGATGCTCCCGATG+GGG + chr3_3:84519892-84519911 Msa0479510:CDS 55.0%
CTGCTGCTGTCGACGCTGTA+TGG - chr3_3:84517223-84517242 None:intergenic 60.0%
!! CATACAGCGTCGACAGCAGC+AGG + chr3_3:84517221-84517240 Msa0479510:CDS 60.0%
TGGCATCGTCGAACGCTGCA+AGG - chr3_3:84517367-84517386 None:intergenic 60.0%
CTATGCCGCACTCCACAGCA+TGG - chr3_3:84517484-84517503 None:intergenic 60.0%
TGCTGTGGAGTGCGGCATAG+TGG + chr3_3:84517484-84517503 Msa0479510:CDS 60.0%
GAAACGGTGCAAGGGATGGG+TGG + chr3_3:84518288-84518307 Msa0479510:CDS 60.0%
GCCATTGTCGATGCTCCCGA+TGG + chr3_3:84519890-84519909 Msa0479510:CDS 60.0%
!! CCCATCGGGAGCATCGACAA+TGG - chr3_3:84519894-84519913 None:intergenic 60.0%
AAGGTGGGTCCCCTGAAGCG+AGG + chr3_3:84517294-84517313 Msa0479510:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 84515523 84520087 84515523 ID=Msa0479510;Name=Msa0479510
chr3_3 mRNA 84515523 84520087 84515523 ID=Msa0479510-mRNA-1;Parent=Msa0479510;Name=Msa0479510-mRNA-1;_AED=0.09;_eAED=0.09;_QI=29|0.87|0.44|1|1|1|9|0|769
chr3_3 exon 84515523 84515757 84515523 ID=Msa0479510-mRNA-1:exon:23983;Parent=Msa0479510-mRNA-1
chr3_3 exon 84515855 84516105 84515855 ID=Msa0479510-mRNA-1:exon:23984;Parent=Msa0479510-mRNA-1
chr3_3 exon 84516254 84516365 84516254 ID=Msa0479510-mRNA-1:exon:23985;Parent=Msa0479510-mRNA-1
chr3_3 exon 84517133 84517646 84517133 ID=Msa0479510-mRNA-1:exon:23986;Parent=Msa0479510-mRNA-1
chr3_3 exon 84517991 84518091 84517991 ID=Msa0479510-mRNA-1:exon:23987;Parent=Msa0479510-mRNA-1
chr3_3 exon 84518191 84518430 84518191 ID=Msa0479510-mRNA-1:exon:23988;Parent=Msa0479510-mRNA-1
chr3_3 exon 84518786 84518900 84518786 ID=Msa0479510-mRNA-1:exon:23989;Parent=Msa0479510-mRNA-1
chr3_3 exon 84519023 84519233 84519023 ID=Msa0479510-mRNA-1:exon:23990;Parent=Msa0479510-mRNA-1
chr3_3 exon 84519528 84520087 84519528 ID=Msa0479510-mRNA-1:exon:23991;Parent=Msa0479510-mRNA-1
chr3_3 five_prime_UTR 84515523 84515551 84515523 ID=Msa0479510-mRNA-1:five_prime_utr;Parent=Msa0479510-mRNA-1
chr3_3 CDS 84515552 84515757 84515552 ID=Msa0479510-mRNA-1:cds;Parent=Msa0479510-mRNA-1
chr3_3 CDS 84515855 84516105 84515855 ID=Msa0479510-mRNA-1:cds;Parent=Msa0479510-mRNA-1
chr3_3 CDS 84516254 84516365 84516254 ID=Msa0479510-mRNA-1:cds;Parent=Msa0479510-mRNA-1
chr3_3 CDS 84517133 84517646 84517133 ID=Msa0479510-mRNA-1:cds;Parent=Msa0479510-mRNA-1
chr3_3 CDS 84517991 84518091 84517991 ID=Msa0479510-mRNA-1:cds;Parent=Msa0479510-mRNA-1
chr3_3 CDS 84518191 84518430 84518191 ID=Msa0479510-mRNA-1:cds;Parent=Msa0479510-mRNA-1
chr3_3 CDS 84518786 84518900 84518786 ID=Msa0479510-mRNA-1:cds;Parent=Msa0479510-mRNA-1
chr3_3 CDS 84519023 84519233 84519023 ID=Msa0479510-mRNA-1:cds;Parent=Msa0479510-mRNA-1
chr3_3 CDS 84519528 84520087 84519528 ID=Msa0479510-mRNA-1:cds;Parent=Msa0479510-mRNA-1
Gene Sequence

>Msa0479510

ATGAAGGGAAATCCACTCTTATTGATACTAATATTATACTCTCACTTCATTTTTCTTGGAGAGTCAAAATCATCTTCATATGACCCCCCCATCACTCAATTGGAGAATGACAAACAAGTTTATATTGTGTACATGGGAGCTGCAGATTCAACTAATAGTACCCTTCGAAAAGATCATACCCATGTTTTAAACACGGTGTTAAGAAGGAATGAAAAGGCTCTCGTACACAATTACAAACACGGATTCTCAGGTTTTGCAGCTCATTTATCAAAAAGTGAAGCAAACTCAATAGCTCAACAACCTGGAGTTGTGTCTGTCTTCCCGGATCCCATTCTGAAGCTCCATACAACACGTTCTTGGAATTTCCTTGAAACGCAAACTTACGCTAAAATTGAAAACACCTTCTCCAAGTCTTCTCCCTCTTCATCAGACATCGTAATTGGCCTGTTAGATACAGGTATATGGCCAGAAGCAGCAAGTTTTTCAGACAAGGGAATGGGTCCTATTCCACCTGGTTGGAAAGGCATCTGCATGACATCAAATGACTTCAATTCATCCAACTGTAATAGGAAGATAATCGGAGCAAGGTATTACCCTAACCCTGGTGCAAATGCTACCACAGCAAACACGGTAAGGGATACATATGGACATGGGACCCATACAGCGTCGACAGCAGCAGGGAATGTTGTGAGTGGTGCTTCGTACTATGGTCTGGCAGAAGGGACAGCAAAAGGTGGGTCCCCTGAAGCGAGGTTAGCGATTTACAAAGTGTGCTTTCCTTCCTGTTATGGCTCTGGGATCCTTGCAGCGTTCGACGATGCCATTTCCGATGGAGTAGATGTGCTTTCAATCTCGCTTGGAGCACATTCATTTTTCCGACCAGACTTGACGACAGACCCAATTGCGATCGGAGCATTCCATGCTGTGGAGTGCGGCATAGTGGTTGTTTGCTCCGCTGGGAATGATGGACCAACACAAAGTACAGTTGTTAATGACGCTCCTTGGATATTAACTGTTGCAGCCACTACCATCGATCGTGATATGCAGTCCAACGTTGTCTTAGGTAGTAGCAAAGTTATCGAGGGCAAAGCCATAAATTTCTCCCCTCTATCAAAGTCTCCCGATTATCCATTGATAACCGGAGAATCTGCCAAGACGACTATTGTTGACTTAGCTGAAGCAAGGAAGTGTCACCCAAATTCATTAGATATGAATAAAGTTAAAGGAAAGATTGTCATCTGTGATGGCATAGATGATGATTACTCAACCAATGACAAAATTGAAACGGTGCAAGGGATGGGTGGATTAGGTCTTGTTCATATTATTGACCAAGGAGCAGAGGCAAAAAATTATAAAGACTTCCCAGCAACAGTTGTAAGACCAAAAGATGCTGCCACAATCCTCCAATATGTCAATTCAACAAGCAATCCGGTGGCAACAATTCTACCAACAGTTACAATCATAGATTATAAGCCTGCACCTATGGTGGCAACCTTTTCAAGTAGAGGGCCTTCAGCGCTTTCAAGAAATATTCTAAAACCTGATATTGCAGCACCAGGTGTTGCCATTCTTGCAGCATGGATTGGTAATGATGTAACTGAGGTTCCAAAAGGTAAAAAGCCCTCACCGTATAACATGAAATCAGGGACTTCCATGTCATGCCCACATGTTTCAGGCCTTGCAGGCAGCATTAAATTTAAACACCCTACTTGGAGTGCCTCTGCAATCAGATCGGCCATCATGACCTCTGCAACTCAAATTAACAATATGAAGGCTCCCATTACCACGAATTTGAGGTCAATTGCCACACCATATGATTATGGAGCAGGAGAAATAACAACAACGGAACCATTCCAGCCAGGGCTAGTTTATGAAACTAGCACCATTGACTACCTAAACTACTTGTGTTACATAGGATTGAATACAACCACGGTGAAGATTATCTCCAAAACCGTCCCTGATAGTTTCAACTGCCCCAAGGATTCAACTATTGATCATGTCTCGAACATCAACTACACTTCCATAGCAATCACAAACTTCATTGGTAAAGGAACCAAGAATGTGAGCAGAATTGTCACAAACGTTGGTGAAGAGGATGAAATAGTCTACACTGCCATTGTCGATGCTCCCGATGGGGTGAAAATCCAGTTGATTCCAGAGAAATTAGAGTTTACAAAAAATAGCAAAAAACTAAGCTACCAAATTATTTTCTCCTCTACTTTGCCCTCTCTAAAAGAAGATTTGTTTGGATCCATTACATGGAGTAATGGGAAATATAATGTTCGGAGTCCTTTTGTATTAACCGTGTAA
Protein sequence

>Msa0479510

MKGNPLLLILILYSHFIFLGESKSSSYDPPITQLENDKQVYIVYMGAADSTNSTLRKDHTHVLNTVLRRNEKALVHNYKHGFSGFAAHLSKSEANSIAQQPGVVSVFPDPILKLHTTRSWNFLETQTYAKIENTFSKSSPSSSDIVIGLLDTGIWPEAASFSDKGMGPIPPGWKGICMTSNDFNSSNCNRKIIGARYYPNPGANATTANTVRDTYGHGTHTASTAAGNVVSGASYYGLAEGTAKGGSPEARLAIYKVCFPSCYGSGILAAFDDAISDGVDVLSISLGAHSFFRPDLTTDPIAIGAFHAVECGIVVVCSAGNDGPTQSTVVNDAPWILTVAATTIDRDMQSNVVLGSSKVIEGKAINFSPLSKSPDYPLITGESAKTTIVDLAEARKCHPNSLDMNKVKGKIVICDGIDDDYSTNDKIETVQGMGGLGLVHIIDQGAEAKNYKDFPATVVRPKDAATILQYVNSTSNPVATILPTVTIIDYKPAPMVATFSSRGPSALSRNILKPDIAAPGVAILAAWIGNDVTEVPKGKKPSPYNMKSGTSMSCPHVSGLAGSIKFKHPTWSASAIRSAIMTSATQINNMKAPITTNLRSIATPYDYGAGEITTTEPFQPGLVYETSTIDYLNYLCYIGLNTTTVKIISKTVPDSFNCPKDSTIDHVSNINYTSIAITNFIGKGTKNVSRIVTNVGEEDEIVYTAIVDAPDGVKIQLIPEKLEFTKNSKKLSYQIIFSSTLPSLKEDLFGSITWSNGKYNVRSPFVLTV*