AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0435900

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0435900 MtrunA17_Chr3g0136151 77.454 754 144 6 20 758 21 763 0.0 1144
Msa0435900 MtrunA17_Chr3g0143251 74.675 770 177 6 1 757 1 765 0.0 1131
Msa0435900 MtrunA17_Chr3g0143241 78.151 476 86 5 1 463 1 471 0.0 729
Msa0435900 MtrunA17_Chr8g0354771 47.594 748 354 15 41 758 26 765 0.0 642
Msa0435900 MtrunA17_Chr8g0354741 47.923 626 301 10 147 758 21 635 0.0 545
Msa0435900 MtrunA17_Chr8g0369891 40.800 750 386 20 39 758 33 754 1.18e-178 530
Msa0435900 MtrunA17_Chr5g0407701 40.374 748 395 20 39 758 27 751 3.68e-178 529
Msa0435900 MtrunA17_Chr4g0057471 41.609 721 381 14 65 758 3 710 1.60e-174 518
Msa0435900 MtrunA17_Chr8g0377961 42.517 755 383 19 35 756 38 774 9.15e-174 518
Msa0435900 MtrunA17_Chr4g0076611 42.797 715 355 18 74 756 1 693 4.59e-172 511
Msa0435900 MtrunA17_Chr4g0026641 40.103 778 409 19 10 758 6 755 1.11e-171 512
Msa0435900 MtrunA17_Chr3g0120521 39.898 782 409 19 15 756 9 769 1.55e-169 507
Msa0435900 MtrunA17_Chr4g0020651 42.876 758 372 24 35 757 26 757 3.95e-162 487
Msa0435900 MtrunA17_Chr4g0037221 39.390 721 385 14 74 757 63 768 4.38e-161 485
Msa0435900 MtrunA17_Chr5g0401511 42.404 757 377 24 35 757 30 761 9.02e-161 484
Msa0435900 MtrunA17_Chr3g0105451 79.110 292 49 1 467 758 1 280 3.70e-160 464
Msa0435900 MtrunA17_Chr4g0057531 39.789 759 408 15 38 758 31 778 4.65e-160 483
Msa0435900 MtrunA17_Chr2g0300751 41.119 715 370 19 74 756 77 772 1.50e-159 481
Msa0435900 MtrunA17_Chr4g0057481 41.254 686 358 13 97 753 17 686 3.58e-157 472
Msa0435900 MtrunA17_Chr8g0351011 39.516 744 392 19 37 756 42 751 2.26e-156 472
Msa0435900 MtrunA17_Chr7g0250371 38.946 778 401 24 31 753 23 781 1.84e-154 468
Msa0435900 MtrunA17_Chr1g0204321 38.731 772 405 22 32 757 28 777 1.86e-154 468
Msa0435900 MtrunA17_Chr7g0250481 38.804 786 397 23 38 756 29 797 2.20e-154 469
Msa0435900 MtrunA17_Chr1g0146271 38.636 748 391 18 35 758 31 734 5.30e-154 466
Msa0435900 MtrunA17_Chr7g0262161 39.867 750 403 22 41 757 27 761 1.27e-153 466
Msa0435900 MtrunA17_Chr6g0470881 38.693 765 411 19 6 756 9 729 1.99e-153 464
Msa0435900 MtrunA17_Chr7g0246451 39.865 740 392 18 38 756 38 745 2.43e-153 464
Msa0435900 MtrunA17_Chr1g0170081 38.503 748 390 23 35 758 31 732 5.65e-153 463
Msa0435900 MtrunA17_Chr3g0105461 67.493 363 75 4 1 361 1 322 1.22e-152 448
Msa0435900 MtrunA17_Chr7g0227991 38.372 774 407 21 6 758 11 735 1.37e-152 462
Msa0435900 MtrunA17_Chr2g0285121 38.383 779 403 21 37 757 24 783 4.15e-152 462
Msa0435900 MtrunA17_Chr4g0057461 41.719 640 323 14 153 756 3 628 2.12e-151 455
Msa0435900 MtrunA17_Chr8g0344331 39.211 760 399 23 36 753 33 771 3.65e-151 460
Msa0435900 MtrunA17_Chr1g0146251 38.223 743 403 18 35 758 31 736 4.49e-151 458
Msa0435900 MtrunA17_Chr7g0250391 39.793 774 399 25 31 753 22 779 1.11e-150 459
Msa0435900 MtrunA17_Chr4g0053781 39.762 757 390 27 38 757 28 755 1.15e-150 457
Msa0435900 MtrunA17_Chr7g0250411 38.875 782 401 26 31 756 23 783 1.41e-150 459
Msa0435900 MtrunA17_Chr7g0250331 39.394 792 386 27 38 753 30 803 5.90e-150 457
Msa0435900 MtrunA17_Chr6g0470851 38.410 742 402 18 31 756 27 729 1.49e-149 454
Msa0435900 MtrunA17_Chr7g0266051 38.705 726 390 19 54 756 12 705 3.91e-149 452
Msa0435900 MtrunA17_Chr2g0285111 38.333 780 404 20 36 757 26 786 7.85e-149 454
Msa0435900 MtrunA17_Chr4g0070391 38.278 755 402 21 37 757 28 752 1.38e-148 452
Msa0435900 MtrunA17_Chr1g0152771 37.813 759 412 21 38 757 26 763 1.81e-148 452
Msa0435900 MtrunA17_Chr4g0057511 41.627 627 325 13 157 756 3 615 1.07e-145 440
Msa0435900 MtrunA17_Chr8g0334491 37.335 758 405 23 24 758 19 729 3.82e-145 442
Msa0435900 MtrunA17_Chr5g0423261 41.250 640 321 15 152 756 2 621 1.06e-144 438
Msa0435900 MtrunA17_Chr3g0079971 36.480 784 416 23 4 758 3 733 1.97e-143 438
Msa0435900 MtrunA17_Chr8g0344971 38.052 770 395 23 37 758 26 761 1.30e-142 437
Msa0435900 MtrunA17_Chr7g0248871 38.619 782 422 24 6 756 9 763 1.55e-142 437
Msa0435900 MtrunA17_Chr8g0334521 36.582 790 406 24 1 756 5 733 1.83e-142 436
Msa0435900 MtrunA17_Chr4g0057491 41.260 635 326 15 153 756 3 621 8.48e-141 428
Msa0435900 MtrunA17_Chr1g0189561 37.357 787 422 25 6 756 9 760 5.41e-140 430
Msa0435900 MtrunA17_Chr7g0246461 39.633 709 355 22 74 757 80 740 9.04e-140 429
Msa0435900 MtrunA17_Chr8g0345991 38.559 708 389 19 74 757 69 754 2.07e-138 426
Msa0435900 MtrunA17_Chr8g0345981 38.505 709 390 20 74 757 71 758 5.53e-137 422
Msa0435900 MtrunA17_Chr4g0057061 37.869 779 421 22 6 756 31 774 3.82e-135 418
Msa0435900 MtrunA17_Chr8g0345971 38.701 708 386 18 74 758 78 760 4.37e-135 417
Msa0435900 MtrunA17_Chr3g0134621 35.832 787 409 22 6 757 11 736 1.47e-133 413
Msa0435900 MtrunA17_Chr1g0189251 36.093 773 446 20 6 757 9 754 2.90e-133 412
Msa0435900 MtrunA17_Chr7g0276151 38.235 714 377 22 74 757 77 756 2.35e-131 408
Msa0435900 MtrunA17_Chr8g0345961 39.136 718 376 20 74 757 67 757 5.50e-131 407
Msa0435900 MtrunA17_Chr5g0398241 37.421 791 415 23 1 753 2 750 9.33e-130 403
Msa0435900 MtrunA17_Chr5g0398331 39.356 714 373 21 65 754 71 748 4.98e-129 401
Msa0435900 MtrunA17_Chr8g0376841 40.813 566 291 11 37 576 38 585 4.19e-128 394
Msa0435900 MtrunA17_Chr5g0398401 37.295 791 416 23 1 753 2 750 5.83e-128 399
Msa0435900 MtrunA17_Chr5g0439271 40.066 604 315 12 190 756 8 601 1.19e-126 390
Msa0435900 MtrunA17_Chr2g0303881 39.021 715 376 22 74 757 41 726 6.21e-126 393
Msa0435900 MtrunA17_Chr5g0398311 37.277 786 423 25 1 756 1 746 8.76e-121 380
Msa0435900 MtrunA17_Chr5g0398351 36.711 760 396 22 34 753 16 730 4.12e-115 380
Msa0435900 MtrunA17_Chr5g0398351 35.914 788 431 23 1 753 753 1501 4.69e-115 380
Msa0435900 MtrunA17_Chr7g0248861 41.021 568 287 18 69 609 76 622 1.81e-108 350
Msa0435900 MtrunA17_Chr7g0248861 50.000 226 99 6 144 360 637 857 1.40e-50 190
Msa0435900 MtrunA17_Chr2g0301011 38.698 553 274 15 102 650 3 494 2.50e-106 334
Msa0435900 MtrunA17_Chr5g0447171 37.356 522 240 13 295 752 5 503 8.07e-90 291
Msa0435900 MtrunA17_Chr4g0071871 31.062 763 444 23 55 755 70 812 2.57e-89 298
Msa0435900 MtrunA17_Chr2g0298601 31.302 722 425 19 55 719 70 777 1.20e-86 291
Msa0435900 MtrunA17_Chr3g0142961 94.928 138 7 0 579 716 1 138 2.58e-85 266
Msa0435900 MtrunA17_Chr7g0250461 40.831 409 204 11 31 404 23 428 1.36e-83 274
Msa0435900 MtrunA17_Chr3g0142981 79.167 168 10 1 194 361 32 174 2.76e-80 255
Msa0435900 MtrunA17_Chr3g0097061 40.584 377 183 10 102 462 3 354 8.49e-77 254
Msa0435900 MtrunA17_Chr3g0097061 37.500 120 68 1 519 638 318 430 8.57e-18 87.0
Msa0435900 MtrunA17_Chr6g0480721 41.964 336 160 7 72 388 3 322 1.30e-76 259
Msa0435900 MtrunA17_Chr6g0480721 34.218 377 215 13 387 756 249 599 9.34e-48 179
Msa0435900 MtrunA17_Chr3g0143221 69.832 179 38 2 579 757 1 163 1.26e-75 241
Msa0435900 MtrunA17_Chr2g0302951 30.291 756 416 28 53 729 88 811 1.37e-75 261
Msa0435900 MtrunA17_Chr4g0075331 30.686 743 429 25 62 741 2 721 2.02e-74 256
Msa0435900 MtrunA17_Chr7g0261691 43.402 341 160 9 149 463 13 346 9.86e-74 243
Msa0435900 MtrunA17_Chr4g0026651 43.182 308 135 7 89 361 2 304 6.37e-71 234
Msa0435900 MtrunA17_Chr8g0380961 28.976 742 431 27 59 729 102 818 2.90e-70 246
Msa0435900 MtrunA17_Chr4g0035881 38.674 362 170 6 221 575 4 320 1.40e-69 231
Msa0435900 MtrunA17_Chr7g0261701 41.528 301 163 6 457 756 1 289 1.18e-64 217
Msa0435900 MtrunA17_Chr2g0301911 39.612 361 170 13 164 504 28 360 3.40e-63 216
Msa0435900 MtrunA17_Chr8g0346361 52.020 198 75 6 166 358 4 186 1.13e-54 196
Msa0435900 MtrunA17_Chr8g0346361 35.505 307 176 7 456 756 206 496 4.61e-46 172
Msa0435900 MtrunA17_Chr7g0250441 43.706 286 138 11 480 756 11 282 2.03e-53 187
Msa0435900 MtrunA17_Chr2g0312841 50.785 191 81 4 166 354 9 188 7.44e-53 181
Msa0435900 MtrunA17_Chr4g0026661 40.154 259 145 6 501 758 12 261 1.97e-48 172
Msa0435900 MtrunA17_Chr3g0143021 77.982 109 20 2 70 178 3 107 3.49e-48 165
Msa0435900 MtrunA17_Chr3g0103071 39.446 289 152 7 268 539 1 283 1.39e-47 170
Msa0435900 MtrunA17_Chr3g0142971 91.765 85 7 0 484 568 1 85 5.37e-47 161
Msa0435900 MtrunA17_Chr3g0103061 41.079 241 117 6 38 259 26 260 1.26e-45 164
Msa0435900 MtrunA17_Chr3g0143231 87.640 89 11 0 484 572 1 89 5.79e-45 155
Msa0435900 MtrunA17_Chr5g0436021 51.852 162 64 4 191 346 31 184 5.38e-42 151
Msa0435900 MtrunA17_Chr2g0312861 33.721 258 157 5 501 756 1 246 4.05e-37 141
Msa0435900 MtrunA17_Chr2g0301031 34.749 259 157 4 501 758 1 248 1.34e-36 138
Msa0435900 MtrunA17_Chr2g0301021 29.058 382 170 11 35 403 31 324 2.40e-34 135
Msa0435900 MtrunA17_Chr4g0071191 34.579 214 122 7 456 666 32 230 1.02e-29 118
Msa0435900 MtrunA17_Chr2g0301921 32.877 219 134 5 541 758 1 207 6.18e-28 112
Msa0435900 MtrunA17_Chr4g0035871 44.444 144 75 2 50 190 9 150 5.93e-27 107
Msa0435900 MtrunA17_Chr3g0103081 36.486 148 86 3 609 756 3 142 4.41e-24 99.0
Msa0435900 MtrunA17_Chr5g0418921 46.269 134 59 3 475 600 6 134 1.44e-22 95.9
Msa0435900 MtrunA17_Chr8g0354731 43.590 117 60 4 41 152 54 169 3.45e-22 94.4
Msa0435900 MtrunA17_Chr5g0439281 35.838 173 91 7 38 192 27 197 3.77e-21 92.0
Msa0435900 MtrunA17_Chr3g0143011 75.472 53 13 0 309 361 1 53 3.24e-18 79.3
Msa0435900 MtrunA17_Chr8g0346351 33.918 171 95 5 1 166 2 159 3.66e-17 79.7
Msa0435900 MtrunA17_Chr5g0436031 32.544 169 103 5 591 756 20 180 6.60e-17 80.5
Msa0435900 MtrunA17_Chr7g0248851 35.714 154 83 7 609 756 3 146 1.17e-16 77.8
Msa0435900 MtrunA17_Chr8g0376851 29.586 169 105 6 594 756 11 171 1.40e-16 78.2
Msa0435900 MtrunA17_Chr5g0447151 37.209 129 66 4 39 154 29 155 1.57e-14 71.6
Msa0435900 MtrunA17_Chr3g0077671 50.704 71 33 2 533 601 238 308 1.30e-12 69.3
Msa0435900 MtrunA17_Chr4g0057501 33.333 129 66 3 41 154 7 130 1.22e-11 62.8
Msa0435900 MtrunA17_Chr4g0057521 39.785 93 48 2 64 152 9 97 1.38e-11 63.5
Msa0435900 MtrunA17_Chr5g0434941 48.684 76 36 2 274 348 2 75 1.86e-11 60.5
Msa0435900 MtrunA17_Chr2g0312831 38.636 88 51 2 39 123 35 122 4.72e-11 61.2
Msa0435900 MtrunA17_Chr5g0398341 37.500 96 58 1 541 636 1 94 8.89e-11 59.3
Msa0435900 MtrunA17_Chr2g0301901 36.000 100 61 2 35 131 31 130 9.94e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0435900 AT1G20160.1 56.645 775 305 10 1 757 1 762 0.0 841
Msa0435900 AT1G20160.2 58.873 710 276 6 62 757 16 723 0.0 831
Msa0435900 AT1G20150.1 51.409 745 328 11 41 757 33 771 0.0 749
Msa0435900 AT1G20160.3 55.000 520 204 9 1 502 1 508 1.24e-180 528
Msa0435900 AT2G04160.1 41.092 769 382 22 37 758 28 772 3.23e-178 530
Msa0435900 AT5G59100.1 40.676 740 386 18 37 756 31 737 1.67e-169 506
Msa0435900 AT3G46850.1 41.319 743 379 21 35 756 28 734 1.34e-163 491
Msa0435900 AT5G59810.1 39.050 758 405 16 38 758 39 776 1.35e-163 492
Msa0435900 AT5G59090.1 40.617 746 381 20 34 758 26 730 2.08e-163 490
Msa0435900 AT5G67360.1 40.584 754 401 21 31 757 22 755 7.69e-163 489
Msa0435900 AT5G59090.2 40.483 746 377 20 34 758 26 725 3.13e-162 487
Msa0435900 AT5G59090.3 40.617 746 379 21 34 758 26 728 5.68e-162 486
Msa0435900 AT5G59120.1 39.390 754 381 22 31 756 22 727 1.68e-159 480
Msa0435900 AT5G59130.4 38.963 752 381 20 31 756 26 725 2.71e-159 479
Msa0435900 AT3G46840.1 39.837 738 396 18 35 756 29 734 4.01e-159 479
Msa0435900 AT5G45650.2 39.797 789 387 21 37 758 23 790 1.19e-158 480
Msa0435900 AT5G45650.1 39.797 789 387 21 37 758 23 790 1.19e-158 480
Msa0435900 AT3G14240.1 41.860 731 360 20 73 758 61 771 1.76e-158 479
Msa0435900 AT2G05920.1 40.080 751 392 21 38 757 27 750 1.83e-158 478
Msa0435900 AT4G34980.1 38.832 788 410 21 8 757 6 759 4.08e-157 475
Msa0435900 AT5G59130.1 38.830 752 378 21 31 756 26 721 3.17e-156 471
Msa0435900 AT5G59130.2 38.564 752 374 21 31 756 26 715 1.16e-153 465
Msa0435900 AT5G59130.3 38.728 723 366 19 59 756 16 686 1.30e-152 461
Msa0435900 AT4G10540.1 38.624 756 405 21 37 754 27 761 4.79e-150 457
Msa0435900 AT3G14067.1 38.083 751 418 16 39 756 31 767 1.91e-149 456
Msa0435900 AT5G58840.1 38.543 755 362 20 31 756 25 706 2.78e-149 453
Msa0435900 AT1G32960.1 39.211 760 399 22 35 754 27 763 5.29e-149 454
Msa0435900 AT1G66210.1 38.636 748 405 20 31 754 31 748 5.64e-149 454
Msa0435900 AT4G10550.1 37.944 788 416 21 9 754 8 764 1.02e-148 454
Msa0435900 AT5G58830.1 38.320 762 398 21 6 758 9 707 1.14e-148 451
Msa0435900 AT1G32950.1 38.697 783 410 19 9 753 8 758 1.96e-148 453
Msa0435900 AT5G59190.1 40.514 701 353 17 74 755 32 687 2.37e-148 450
Msa0435900 AT4G10550.3 38.077 780 410 21 17 754 32 780 3.36e-148 453
Msa0435900 AT1G32940.1 37.731 758 415 19 33 753 22 759 4.95e-148 452
Msa0435900 AT4G00230.1 39.867 750 385 20 35 756 32 743 6.09e-148 451
Msa0435900 AT5G03620.1 37.549 759 415 21 32 756 25 758 2.33e-147 450
Msa0435900 AT4G10510.3 38.573 757 402 22 37 754 31 763 4.06e-146 447
Msa0435900 AT4G10510.1 38.594 754 400 21 40 754 22 751 5.92e-146 446
Msa0435900 AT1G32940.4 38.827 716 385 17 71 753 13 708 1.06e-145 444
Msa0435900 AT1G32940.2 38.827 716 385 17 71 753 13 708 1.06e-145 444
Msa0435900 AT1G32950.2 40.307 717 372 16 71 753 13 707 2.43e-145 443
Msa0435900 AT4G10520.1 36.974 760 432 18 17 753 6 741 1.47e-144 442
Msa0435900 AT4G10550.4 39.101 734 380 19 62 754 1 708 1.70e-144 441
Msa0435900 AT4G10550.2 39.101 734 380 19 62 754 1 708 1.70e-144 441
Msa0435900 AT5G51750.1 37.032 802 426 26 4 757 5 775 7.96e-144 441
Msa0435900 AT5G58820.1 38.919 740 369 23 36 756 25 700 1.13e-143 438
Msa0435900 AT4G10510.4 38.988 731 384 20 62 754 1 707 3.31e-143 437
Msa0435900 AT4G10510.2 39.246 716 376 19 74 754 1 692 9.40e-143 436
Msa0435900 AT1G66220.1 37.216 747 396 19 39 753 36 741 3.32e-142 436
Msa0435900 AT1G04110.1 38.719 718 391 19 74 758 71 772 4.37e-142 436
Msa0435900 AT4G21640.1 36.015 783 392 22 6 753 16 724 4.66e-136 419
Msa0435900 AT4G21650.1 37.057 761 400 21 34 753 35 757 1.28e-135 419
Msa0435900 AT5G11940.1 36.835 752 408 18 36 754 33 750 1.53e-135 419
Msa0435900 AT4G15040.2 38.366 722 369 25 59 756 16 685 5.96e-135 415
Msa0435900 AT4G15040.1 38.366 722 369 25 59 756 16 685 5.96e-135 415
Msa0435900 AT4G21630.1 36.508 756 404 22 35 753 34 750 1.55e-134 416
Msa0435900 AT1G01900.1 39.518 706 385 18 78 757 83 772 2.53e-134 416
Msa0435900 AT4G26330.2 38.056 720 396 18 71 756 18 721 4.64e-134 414
Msa0435900 AT4G10530.1 35.580 742 418 19 37 753 26 732 6.25e-133 412
Msa0435900 AT5G45640.1 36.905 756 380 19 71 758 27 753 7.44e-131 407
Msa0435900 AT4G26330.1 37.330 734 396 19 71 756 18 735 3.50e-130 404
Msa0435900 AT4G21323.1 35.811 740 426 19 40 756 80 793 9.68e-129 402
Msa0435900 AT4G21326.1 37.063 715 406 16 62 758 1 689 1.77e-128 399
Msa0435900 AT5G58840.3 42.504 567 247 15 31 575 25 534 2.24e-128 393
Msa0435900 AT5G03620.2 41.623 567 291 15 32 573 25 576 4.43e-124 383
Msa0435900 AT4G00230.2 42.376 564 272 15 35 572 32 568 2.79e-120 374
Msa0435900 AT1G32940.3 38.851 592 318 14 33 590 22 603 1.81e-119 372
Msa0435900 AT5G67090.1 35.149 771 404 27 7 743 5 713 2.75e-119 376
Msa0435900 AT1G32970.1 34.754 751 404 24 37 753 21 719 3.58e-109 349
Msa0435900 AT5G58840.2 41.176 493 212 14 31 502 25 460 6.63e-104 327
Msa0435900 AT2G19170.1 31.276 729 417 22 55 719 66 774 5.40e-92 306
Msa0435900 AT2G19170.2 31.276 729 417 22 55 719 66 774 5.40e-92 306
Msa0435900 AT2G39850.1 32.723 764 403 36 59 756 47 765 6.16e-90 299
Msa0435900 AT4G30020.3 31.724 725 404 22 55 711 66 767 1.51e-88 296
Msa0435900 AT4G30020.1 31.724 725 404 22 55 711 66 767 1.51e-88 296
Msa0435900 AT4G30020.4 31.724 725 404 22 55 711 66 767 1.51e-88 296
Msa0435900 AT4G30020.2 31.724 725 404 22 55 711 66 767 1.51e-88 296
Msa0435900 AT1G30600.1 31.343 737 400 26 52 711 75 782 1.31e-84 286
Msa0435900 AT4G20430.3 28.681 781 451 25 55 758 99 850 2.78e-78 269
Msa0435900 AT4G20430.1 28.681 781 451 25 55 758 99 850 2.78e-78 269
Msa0435900 AT4G20430.2 28.986 759 453 23 55 758 99 826 6.34e-78 268
Msa0435900 AT5G44530.1 28.553 767 437 28 21 711 58 789 2.81e-75 261
Msa0435900 AT5G44530.2 27.652 792 437 29 21 711 58 814 2.19e-70 248
Msa0435900 AT1G62340.1 29.292 734 410 26 55 708 78 782 5.01e-68 240
Msa0435900 AT5G44530.3 27.176 563 320 19 21 516 58 597 1.19e-47 179
Msa0435900 AT1G32980.1 38.660 194 105 6 535 724 1 184 4.72e-32 123
Msa0435900 AT5G59110.1 28.144 167 111 5 596 758 7 168 1.07e-12 67.4

Find 213 sgRNAs with CRISPR-Local

Find 310 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATTCATATCTAATGAATT+TGG 0.155343 3_2:-89218914 None:intergenic
TTAGATATGAATAAAGTTAA+AGG 0.212363 3_2:+89218923 Msa0435900:CDS
GACAATTCTGCTCACATTCT+TGG 0.234975 3_2:-89220494 None:intergenic
GTGTGCTTTCCTTCCTGTTA+TGG 0.254058 3_2:+89218046 Msa0435900:CDS
TCAATTCATCCAACTGTAAT+AGG 0.274450 3_2:+89217268 Msa0435900:CDS
ATGTCATGCCCACATGTTTC+AGG 0.281839 3_2:+89219804 Msa0435900:CDS
TGAGTTGTTATTCAGGTATA+TGG 0.287310 3_2:+89217163 Msa0435900:intron
AGGATTGTGGCAGCATCTTT+TGG 0.290735 3_2:-89219100 None:intergenic
CTGCTGCTGTCGACGCTGTA+TGG 0.292455 3_2:-89217934 None:intergenic
TCTTCATCAGACATCGTAAT+TGG 0.303323 3_2:+89216996 Msa0435900:CDS
TGGAGTTGTGTCTGTCTTCC+CGG 0.305107 3_2:+89216878 Msa0435900:CDS
TTTCCTTCCTGTTATGGCTC+TGG 0.306329 3_2:+89218052 Msa0435900:CDS
GTCCCTGATTTCATGTTATA+CGG 0.306362 3_2:-89219777 None:intergenic
TTGGGGCAGTTGAAACTATC+AGG 0.307187 3_2:-89220397 None:intergenic
TAAATCGCTAACCTCGCTTC+AGG 0.312060 3_2:-89218019 None:intergenic
GAAACTATCAGGGACGGTTT+TGG 0.328049 3_2:-89220386 None:intergenic
TCTCTAAAAGAAGATTTGTT+TGG 0.337722 3_2:+89220667 Msa0435900:CDS
GTGAGTGGTGCTTCGTACTA+TGG 0.338135 3_2:+89217965 Msa0435900:CDS
TCCGGTTATCAATGGATAAT+CGG 0.338486 3_2:-89218741 None:intergenic
TTCCTTCCTGTTATGGCTCT+GGG 0.338550 3_2:+89218053 Msa0435900:CDS
GTAGCATTTGCACCAGGGTT+AGG 0.339391 3_2:-89217872 None:intergenic
CCACATGTTTCAGGCCTTGC+AGG 0.343066 3_2:+89219813 Msa0435900:CDS
ATTGCCACACCATATGATTA+TGG 0.344077 3_2:+89220241 Msa0435900:CDS
TATTCATATCTAATGAATTT+GGG 0.344325 3_2:-89218913 None:intergenic
AGCTCCATACAACACGTTCT+TGG 0.344442 3_2:+89216913 Msa0435900:CDS
ATAGTGGTTGTTTGCTCCGC+TGG 0.356716 3_2:+89218214 Msa0435900:CDS
ACCTTGTTGAATTGACATAT+TGG 0.359621 3_2:-89219123 None:intergenic
ACACCTGGTGCTGCAATATC+AGG 0.363178 3_2:-89219690 None:intergenic
TTTGGTCTTACAACTGTTGC+TGG 0.365382 3_2:-89219082 None:intergenic
GATCCATTACATGGAGTAAT+GGG 0.368881 3_2:+89220689 Msa0435900:CDS
TAGCGTAAGTTTGCGTTTCA+AGG 0.370108 3_2:-89216941 None:intergenic
TGGAATGCTCCGATCGCAAT+TGG 0.372944 3_2:-89218175 None:intergenic
ATGCAGTCCAACGTTGTCTT+AGG 0.373158 3_2:+89218319 Msa0435900:CDS
TTTGTAAACTCTAATTTCTC+TGG 0.374943 3_2:-89220595 None:intergenic
GTGCAAGGGATGGGTGGATT+AGG 0.376765 3_2:+89219007 Msa0435900:CDS
ATAATTAACCTGTATCTAAC+AGG 0.381875 3_2:-89217019 None:intergenic
CTAATTTCTCTGGAATCAAC+TGG 0.387769 3_2:-89220585 None:intergenic
CTATGTAACACAAGTAGTTT+AGG 0.388907 3_2:-89220333 None:intergenic
TGACCTCAAATTCGTGGTAA+TGG 0.390077 3_2:-89220218 None:intergenic
CCTTTCCAACCAGGTGGAAT+AGG 0.390458 3_2:-89217222 None:intergenic
CACATCTACTCCATCGGAAA+TGG 0.397559 3_2:-89218098 None:intergenic
GACCTCAAATTCGTGGTAAT+GGG 0.405850 3_2:-89220217 None:intergenic
AATTACAAACACGGATTCTC+AGG 0.406813 3_2:+89216804 Msa0435900:CDS
TCACCGTATAACATGAAATC+AGG 0.410151 3_2:+89219774 Msa0435900:CDS
TCATTCTCCAATTGAGTGAT+GGG 0.418501 3_2:-89216556 None:intergenic
ATGATCAATAGTTGAATCCT+TGG 0.418836 3_2:-89220416 None:intergenic
TTAAATTTAAACACCCTACT+TGG 0.420271 3_2:+89219841 Msa0435900:CDS
ATAGCAATCACAAACTTCAT+TGG 0.424120 3_2:+89220463 Msa0435900:CDS
AATTACACGGTTAATACAAA+AGG 0.425257 3_2:-89220730 None:intergenic
AAGTAGAGGAGAAAATAATT+TGG 0.425366 3_2:-89220639 None:intergenic
ATTGGGTCTGTCGTCAAGTC+TGG 0.426192 3_2:-89218157 None:intergenic
CCCGATTATCCATTGATAAC+CGG 0.427323 3_2:+89218740 Msa0435900:CDS
TTTCCCATTACTCCATGTAA+TGG 0.430740 3_2:-89220692 None:intergenic
GCAGATTCTCCGGTTATCAA+TGG 0.435208 3_2:-89218749 None:intergenic
GTCATTCTCCAATTGAGTGA+TGG 0.437272 3_2:-89216557 None:intergenic
TGATCAATAGTTGAATCCTT+GGG 0.437416 3_2:-89220415 None:intergenic
GTAATTGGCCTGTTAGATAC+AGG 0.439720 3_2:+89217011 Msa0435900:CDS
ACCAATCCATGCTGCAAGAA+TGG 0.444946 3_2:-89219715 None:intergenic
GTTTGCTCCGCTGGGAATGA+TGG 0.448132 3_2:+89218223 Msa0435900:CDS
AGTTGTCTTGGCAGATTCTC+CGG 0.448595 3_2:-89218759 None:intergenic
TCTCCTGCTCCATAATCATA+TGG 0.449055 3_2:-89220250 None:intergenic
AATTCCAAGAACGTGTTGTA+TGG 0.449971 3_2:-89216917 None:intergenic
AGATTATAAGCCTGCACCTA+TGG 0.451616 3_2:+89219512 Msa0435900:CDS
TAGCATTTGCACCAGGGTTA+GGG 0.455304 3_2:-89217871 None:intergenic
AAAATTAATTTGAAGCAATC+CGG 0.455831 3_2:+89219458 Msa0435900:intron
CTAAACTACTTGTGTTACAT+AGG 0.470298 3_2:+89220334 Msa0435900:CDS
AAGGATCCCAGAGCCATAAC+AGG 0.473091 3_2:-89218059 None:intergenic
ACAAGTTTATATTGTGTACA+TGG 0.476611 3_2:+89216582 Msa0435900:CDS
TAAGTCAACAATAGTTGTCT+TGG 0.478559 3_2:-89218771 None:intergenic
GCTGTGGTAGCATTTGCACC+AGG 0.478639 3_2:-89217878 None:intergenic
GGATCCATTACATGGAGTAA+TGG 0.479293 3_2:+89220688 Msa0435900:CDS
AAATCGCTAACCTCGCTTCA+GGG 0.480509 3_2:-89218018 None:intergenic
ATTATTTATAAGGAATGAAA+AGG 0.481008 3_2:+89216770 Msa0435900:intron
TGCTGCTGTCGACGCTGTAT+GGG 0.482154 3_2:-89217933 None:intergenic
CTACCACAGCAAACACGGTA+AGG 0.483699 3_2:+89217891 Msa0435900:CDS
TGATGAAGAGGGAGAAGACT+TGG 0.484256 3_2:-89216982 None:intergenic
CCGGTTATCAATGGATAATC+GGG 0.484675 3_2:-89218740 None:intergenic
TAGTGGTTGTTTGCTCCGCT+GGG 0.486756 3_2:+89218215 Msa0435900:CDS
TGAAGGCCCTCTACTTGAAA+AGG 0.487528 3_2:-89219541 None:intergenic
GCCATTGTCGATGCTCCCGA+TGG 0.487641 3_2:+89220553 Msa0435900:CDS
CTGGCAGAAGGGACAGCAAA+AGG 0.488288 3_2:+89217989 Msa0435900:CDS
TGGAGCTTCAGAATGGGATC+CGG 0.492745 3_2:-89216897 None:intergenic
ATTTGTTTGGATCCATTACA+TGG 0.493004 3_2:+89220680 Msa0435900:CDS
CTCCCATTACCACGAATTTG+AGG 0.493474 3_2:+89220215 Msa0435900:CDS
TAAACTAGCCCTGGCTGGAA+TGG 0.494916 3_2:-89220289 None:intergenic
GTAATGGGAAATATAATGTT+CGG 0.495988 3_2:+89220704 Msa0435900:CDS
CTTGAAAAGGTTGCCACCAT+AGG 0.496364 3_2:-89219528 None:intergenic
CATACAGCGTCGACAGCAGC+AGG 0.496546 3_2:+89217935 Msa0435900:CDS
TCGTACTATGGTCTGGCAGA+AGG 0.498187 3_2:+89217977 Msa0435900:CDS
ATCACAAACTTCATTGGTAA+AGG 0.499700 3_2:+89220469 Msa0435900:CDS
TTTCATAAACTAGCCCTGGC+TGG 0.502842 3_2:-89220294 None:intergenic
AATTGAAACGGTGCAAGGGA+TGG 0.504212 3_2:+89218997 Msa0435900:CDS
GATGTGCTTTCAATCTCGCT+TGG 0.507175 3_2:+89218115 Msa0435900:CDS
ACACCATATGATTATGGAGC+AGG 0.507622 3_2:+89220247 Msa0435900:CDS
GCCATTCTTGCAGCATGGAT+TGG 0.508286 3_2:+89219714 Msa0435900:CDS
AACCAATGACAAAATTGAAA+CGG 0.510051 3_2:+89218985 Msa0435900:CDS
GACAAAATTGAAACGGTGCA+AGG 0.512959 3_2:+89218992 Msa0435900:CDS
GGAGCTTCAGAATGGGATCC+GGG 0.515401 3_2:-89216896 None:intergenic
GGAATGCTCCGATCGCAATT+GGG 0.519259 3_2:-89218174 None:intergenic
GATTTCATGTTATACGGTGA+GGG 0.522303 3_2:-89219771 None:intergenic
TGGCATCGTCGAACGCTGCA+AGG 0.523723 3_2:-89218078 None:intergenic
TTAACAACTGTACTTTGTGT+TGG 0.523726 3_2:-89218247 None:intergenic
TAAATTTAATGCTGCCTGCA+AGG 0.523751 3_2:-89219827 None:intergenic
TTGGTCTTACAACTGTTGCT+GGG 0.523862 3_2:-89219081 None:intergenic
TGGTGCTTCGTACTATGGTC+TGG 0.524052 3_2:+89217970 Msa0435900:CDS
AGATCGGCCATCATGACCTC+TGG 0.527944 3_2:+89219879 Msa0435900:CDS
TAATCTATGATTGTAACTGT+TGG 0.528667 3_2:-89219495 None:intergenic
CTAGTTTCATAAACTAGCCC+TGG 0.529301 3_2:-89220298 None:intergenic
CAAGTAGTTTAGGTAGTCAA+TGG 0.529866 3_2:-89220323 None:intergenic
CAGTTGTTAATGACGCTCCT+TGG 0.529891 3_2:+89218260 Msa0435900:CDS
AGAGGGAGAAGACTTGGAGA+AGG 0.530040 3_2:-89216976 None:intergenic
CATTCTCCAATTGAGTGATG+GGG 0.530952 3_2:-89216555 None:intergenic
GTTGTATGGAGCTTCAGAAT+GGG 0.532439 3_2:-89216903 None:intergenic
TTGTTGAATTGACATATTGG+AGG 0.533745 3_2:-89219120 None:intergenic
AAGGTTGCCACCATAGGTGC+AGG 0.534542 3_2:-89219522 None:intergenic
CCTATTCCACCTGGTTGGAA+AGG 0.536106 3_2:+89217222 Msa0435900:CDS
TGTTGTATGGAGCTTCAGAA+TGG 0.536414 3_2:-89216904 None:intergenic
CCATTGTCGATGCTCCCGAT+GGG 0.536765 3_2:+89220554 Msa0435900:CDS
GTGTTGCCATTCTTGCAGCA+TGG 0.537096 3_2:+89219709 Msa0435900:CDS
GATGTAACTGAGGTTCCAAA+AGG 0.537216 3_2:+89219741 Msa0435900:CDS
TTGCAGAGGCACTCCAAGTA+GGG 0.538678 3_2:-89219854 None:intergenic
ATGCAGATGCCTTTCCAACC+AGG 0.544841 3_2:-89217231 None:intergenic
TGCTGTGGAGTGCGGCATAG+TGG 0.547506 3_2:+89218198 Msa0435900:CDS
ACAACGGAACCATTCCAGCC+AGG 0.547930 3_2:+89220280 Msa0435900:CDS
GTTGGTAGAATTGTTGCCAC+CGG 0.548002 3_2:-89219477 None:intergenic
TTAACACCGTGTTTAAAACA+TGG 0.549023 3_2:-89216648 None:intergenic
GGAAAGATTGTCATCTGTGA+TGG 0.549315 3_2:+89218944 Msa0435900:CDS
AATGAAGTTTGTGATTGCTA+TGG 0.549498 3_2:-89220461 None:intergenic
AACTCAAATTAACAATATGA+AGG 0.549735 3_2:+89220192 Msa0435900:CDS
AACTCAATAGCTCAACAACC+TGG 0.550625 3_2:+89216858 Msa0435900:CDS
ACAAAATTGAAACGGTGCAA+GGG 0.550943 3_2:+89218993 Msa0435900:CDS
GGCAATTGACCTCAAATTCG+TGG 0.551079 3_2:-89220224 None:intergenic
TTCTCCAATTGAGTGATGGG+GGG 0.551248 3_2:-89216553 None:intergenic
AATATTAGTATCAATAAGAG+TGG 0.552099 3_2:-89216481 None:intergenic
TTCGACGATGCCATTTCCGA+TGG 0.553569 3_2:+89218088 Msa0435900:CDS
ATATTTCTTGAAAGCGCTGA+AGG 0.554068 3_2:-89219558 None:intergenic
ATTGAAACGGTGCAAGGGAT+GGG 0.554707 3_2:+89218998 Msa0435900:CDS
TAGCCTGATATTGCAGCACC+AGG 0.555710 3_2:+89219687 Msa0435900:intron
CCTGCAAGGCCTGAAACATG+TGG 0.556564 3_2:-89219813 None:intergenic
CTGTGGTAGCATTTGCACCA+GGG 0.557512 3_2:-89217877 None:intergenic
TGTCACAAACGTTGGTGAAG+AGG 0.558206 3_2:+89220513 Msa0435900:CDS
ATTCTCCAATTGAGTGATGG+GGG 0.560258 3_2:-89216554 None:intergenic
AACACGGTAAGGGATACATA+TGG 0.560843 3_2:+89217902 Msa0435900:CDS
CTTGTTCATATTATTGACCA+AGG 0.561403 3_2:+89219031 Msa0435900:CDS
TGATTTCATGTTATACGGTG+AGG 0.563336 3_2:-89219772 None:intergenic
TGGGTCCTATTCCACCTGGT+TGG 0.563836 3_2:+89217217 Msa0435900:CDS
CATATCACGATCGATGGTAG+TGG 0.566936 3_2:-89218299 None:intergenic
GCATTCCATGCTGTGGAGTG+CGG 0.567220 3_2:+89218190 Msa0435900:CDS
TAACACCGTGTTTAAAACAT+GGG 0.567352 3_2:-89216647 None:intergenic
CGTACTATGGTCTGGCAGAA+GGG 0.569087 3_2:+89217978 Msa0435900:CDS
AATTACGATGTCTGATGAAG+AGG 0.571232 3_2:-89216994 None:intergenic
ATTGCAGAGGCACTCCAAGT+AGG 0.578761 3_2:-89219855 None:intergenic
GGGAAGACAGACACAACTCC+AGG 0.579976 3_2:-89216876 None:intergenic
CTCGTACACAATTACAAACA+CGG 0.586425 3_2:+89216795 Msa0435900:CDS
AATCGCTAACCTCGCTTCAG+GGG 0.590362 3_2:-89218017 None:intergenic
ATTACGATGTCTGATGAAGA+GGG 0.590536 3_2:-89216993 None:intergenic
TGAAACATGTGGGCATGACA+TGG 0.590854 3_2:-89219802 None:intergenic
CAACGGAACCATTCCAGCCA+GGG 0.592209 3_2:+89220281 Msa0435900:CDS
TTAGGAAGATAATCGGAGCA+AGG 0.595352 3_2:+89217843 Msa0435900:intron
GCAGAAGGGACAGCAAAAGG+TGG 0.596007 3_2:+89217992 Msa0435900:CDS
AGTCTAACCAGAGGTCATGA+TGG 0.597164 3_2:-89219886 None:intergenic
TCTCCAATTGAGTGATGGGG+GGG 0.598368 3_2:-89216552 None:intergenic
TAGAGAATACTAAACATGAA+AGG 0.598927 3_2:+89216454 Msa0435900:exon
CAAGTTTATATTGTGTACAT+GGG 0.599634 3_2:+89216583 Msa0435900:CDS
AAGTTTGTGATTGCTATGGA+AGG 0.602576 3_2:-89220457 None:intergenic
TGAAAGCACATCTACTCCAT+CGG 0.602949 3_2:-89218104 None:intergenic
GCTACTACCTAAGACAACGT+TGG 0.603357 3_2:-89218326 None:intergenic
TTATAAGCCTGCACCTATGG+TGG 0.604912 3_2:+89219515 Msa0435900:CDS
TATTATTGACCAAGGAGCAG+AGG 0.606444 3_2:+89219039 Msa0435900:CDS
TTGTTGACTTAGCTGAAGCA+AGG 0.611506 3_2:+89218783 Msa0435900:CDS
GCTGCAACAGTTAATATCCA+AGG 0.622492 3_2:-89218277 None:intergenic
TGATAGTTTCAACTGCCCCA+AGG 0.625168 3_2:+89220399 Msa0435900:CDS
ATCCCTTACCGTGTTTGCTG+TGG 0.626261 3_2:-89217894 None:intergenic
GCAGTTGAAACTATCAGGGA+CGG 0.626916 3_2:-89220392 None:intergenic
TACCACAGCAAACACGGTAA+GGG 0.627495 3_2:+89217892 Msa0435900:CDS
CTATGCCGCACTCCACAGCA+TGG 0.629403 3_2:-89218195 None:intergenic
AAATGCTACCACAGCAAACA+CGG 0.629472 3_2:+89217886 Msa0435900:CDS
GGAATGGGTCCTATTCCACC+TGG 0.630491 3_2:+89217213 Msa0435900:CDS
CACCGTATAACATGAAATCA+GGG 0.630643 3_2:+89219775 Msa0435900:CDS
TGGGGCAGTTGAAACTATCA+GGG 0.632412 3_2:-89220396 None:intergenic
GAAACGGTGCAAGGGATGGG+TGG 0.636122 3_2:+89219001 Msa0435900:CDS
ATCCCAGAGCCATAACAGGA+AGG 0.636901 3_2:-89218055 None:intergenic
CAGAAGGGACAGCAAAAGGT+GGG 0.637755 3_2:+89217993 Msa0435900:CDS
ATTGACATATTGGAGGATTG+TGG 0.637845 3_2:-89219113 None:intergenic
CCCATCGGGAGCATCGACAA+TGG 0.639676 3_2:-89220554 None:intergenic
GTAAGGGATACATATGGACA+TGG 0.641842 3_2:+89217908 Msa0435900:CDS
ATTAATTTGAAGCAATCCGG+TGG 0.643428 3_2:+89219461 Msa0435900:intron
TGCTCCATAATCATATGGTG+TGG 0.643902 3_2:-89220245 None:intergenic
ACGACAGACCCAATTGCGAT+CGG 0.644529 3_2:+89218166 Msa0435900:CDS
GCTGCAAGAATGGCAACACC+TGG 0.647294 3_2:-89219705 None:intergenic
GGTCTGTCGTCAAGTCTGGT+CGG 0.647527 3_2:-89218153 None:intergenic
GATCGGAGCATTCCATGCTG+TGG 0.648403 3_2:+89218183 Msa0435900:CDS
CTGCAAGGCCTGAAACATGT+GGG 0.652805 3_2:-89219812 None:intergenic
GAGTGCCTCTGCAATCAGAT+CGG 0.653229 3_2:+89219863 Msa0435900:CDS
AAGGTGGGTCCCCTGAAGCG+AGG 0.662550 3_2:+89218008 Msa0435900:CDS
GGACTGCATATCACGATCGA+TGG 0.664782 3_2:-89218305 None:intergenic
TCCAATATGTCAATTCAACA+AGG 0.665015 3_2:+89219122 Msa0435900:CDS
AGGTAGTAGCAAAGTTATCG+AGG 0.666458 3_2:+89218339 Msa0435900:CDS
GATGGCCGATCTGATTGCAG+AGG 0.667988 3_2:-89219868 None:intergenic
GATCAATAGTTGAATCCTTG+GGG 0.677090 3_2:-89220414 None:intergenic
GCAAGGTATTACCCTAACCC+TGG 0.678267 3_2:+89217860 Msa0435900:CDS
CAGATGCCTTTCCAACCAGG+TGG 0.680523 3_2:-89217228 None:intergenic
AGCAGGAGAAATAACAACAA+CGG 0.683521 3_2:+89220264 Msa0435900:CDS
AGCAGAATTGTCACAAACGT+TGG 0.689218 3_2:+89220505 Msa0435900:CDS
AGTTTGTGATTGCTATGGAA+GGG 0.696807 3_2:-89220456 None:intergenic
CATTGTCGATGCTCCCGATG+GGG 0.697712 3_2:+89220555 Msa0435900:CDS
ATACAGCGTCGACAGCAGCA+GGG 0.699819 3_2:+89217936 Msa0435900:CDS
TAAGGGATACATATGGACAT+GGG 0.700951 3_2:+89217909 Msa0435900:CDS
CATAGGATTGAATACAACCA+CGG 0.705724 3_2:+89220351 Msa0435900:CDS
TTTGGAGATAATCTTCACCG+TGG 0.706380 3_2:-89220368 None:intergenic
GATTGGTAATGATGTAACTG+AGG 0.710188 3_2:+89219731 Msa0435900:CDS
TGTTGGTCCATCATTCCCAG+CGG 0.719043 3_2:-89218230 None:intergenic
GCAGCAGGGAATGTTGTGAG+TGG 0.724482 3_2:+89217950 Msa0435900:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAATGAAAATAAAATCA+TGG - chr3_2:89217826-89217845 None:intergenic 10.0%
!!! ATGATTTTATTTTCATTTTT+AGG + chr3_2:89217825-89217844 Msa0435900:intron 10.0%
!! AAAAAGAAAAATCTTAAAAT+TGG - chr3_2:89218395-89218414 None:intergenic 10.0%
!! ATTCAATTACAATAATTTAT+AGG - chr3_2:89218618-89218637 None:intergenic 10.0%
!!! TAATTTTATGCATATTTATT+TGG - chr3_2:89219207-89219226 None:intergenic 10.0%
!! AATACAATAAAAATTTCAAA+CGG - chr3_2:89219431-89219450 None:intergenic 10.0%
!! AATGATGTGAATTATTTATA+AGG + chr3_2:89216760-89216779 Msa0435900:intron 15.0%
!! ATTATTTATAAGGAATGAAA+AGG + chr3_2:89216770-89216789 Msa0435900:intron 15.0%
!! ATATACTTTAATTCATGATA+AGG - chr3_2:89217121-89217140 None:intergenic 15.0%
!! TTAATTTACCAACAAAAAAA+AGG + chr3_2:89217422-89217441 Msa0435900:intron 15.0%
!! AATTAGTTAATTCATTGTTA+TGG - chr3_2:89218826-89218845 None:intergenic 15.0%
!! TATTCATATCTAATGAATTT+GGG - chr3_2:89218916-89218935 None:intergenic 15.0%
!! TTATTCATATCTAATGAATT+TGG - chr3_2:89218917-89218936 None:intergenic 15.0%
!! TTAGATATGAATAAAGTTAA+AGG + chr3_2:89218923-89218942 Msa0435900:CDS 15.0%
!! TATACAAAGAAATAAAACTT+AGG + chr3_2:89220026-89220045 Msa0435900:intron 15.0%
!! AATATTAGTATCAATAAGAG+TGG - chr3_2:89216484-89216503 None:intergenic 20.0%
!!! TTAATAATGAGTTGTTATTC+AGG + chr3_2:89217156-89217175 Msa0435900:intron 20.0%
!! CAAAATTAGGAAAATCTTTA+TGG - chr3_2:89217473-89217492 None:intergenic 20.0%
!!! CTATGTTTACTTTATTTGTT+TGG + chr3_2:89217781-89217800 Msa0435900:intron 20.0%
!!! TTCATTTTTAGGAAGATAAT+CGG + chr3_2:89217836-89217855 Msa0435900:intron 20.0%
!! GTAATTGAATATTTGAGTAA+AGG + chr3_2:89218628-89218647 Msa0435900:intron 20.0%
!!! TATTATTGTTTGTTAAATGC+AGG + chr3_2:89218882-89218901 Msa0435900:intron 20.0%
!!! AAAATTAATTTGAAGCAATC+CGG + chr3_2:89219458-89219477 Msa0435900:intron 20.0%
!! GCATTTATAAAAATAGAACA+TGG - chr3_2:89220169-89220188 None:intergenic 20.0%
!! AACTCAAATTAACAATATGA+AGG + chr3_2:89220192-89220211 Msa0435900:CDS 20.0%
! TAGAGAATACTAAACATGAA+AGG + chr3_2:89216454-89216473 Msa0435900:exon 25.0%
! ACAAGTTTATATTGTGTACA+TGG + chr3_2:89216582-89216601 Msa0435900:CDS 25.0%
! CAAGTTTATATTGTGTACAT+GGG + chr3_2:89216583-89216602 Msa0435900:CDS 25.0%
! ATAATTAACCTGTATCTAAC+AGG - chr3_2:89217022-89217041 None:intergenic 25.0%
!! TTTTCTTTACCTATTACAGT+TGG - chr3_2:89217280-89217299 None:intergenic 25.0%
!!! TTGCTTTTCACATTTTTGTT+GGG - chr3_2:89217309-89217328 None:intergenic 25.0%
!!! TTTGCTTTTCACATTTTTGT+TGG - chr3_2:89217310-89217329 None:intergenic 25.0%
! AAAATGTGAAAAGCAAAGAA+AGG + chr3_2:89217313-89217332 Msa0435900:intron 25.0%
! TTGTAAAAACCTACAATGTT+TGG + chr3_2:89217553-89217572 Msa0435900:intron 25.0%
! TGATTATTTCCAAACATTGT+AGG - chr3_2:89217565-89217584 None:intergenic 25.0%
!!! ATAATCACTGGAACTTTTTT+TGG + chr3_2:89217578-89217597 Msa0435900:intron 25.0%
!! CTAATTTTGTCCAGTTTAAT+CGG - chr3_2:89217621-89217640 None:intergenic 25.0%
! TCTAACATGTAAGTTTCATT+TGG - chr3_2:89217748-89217767 None:intergenic 25.0%
! TTTATTTGTTTGGTCCATTA+CGG + chr3_2:89217791-89217810 Msa0435900:intron 25.0%
!!! TTTGCTCTATACTTTTGAAA+GGG + chr3_2:89218431-89218450 Msa0435900:intron 25.0%
! AACCAATGACAAAATTGAAA+CGG + chr3_2:89218985-89219004 Msa0435900:CDS 25.0%
! TTAAAACTTTCTCATGTCTA+AGG + chr3_2:89219328-89219347 Msa0435900:intron 25.0%
! TAATCTATGATTGTAACTGT+TGG - chr3_2:89219498-89219517 None:intergenic 25.0%
! TTAAATTTAAACACCCTACT+TGG + chr3_2:89219841-89219860 Msa0435900:CDS 25.0%
! ATAAACCAAACCATTCAAAT+TGG + chr3_2:89220076-89220095 Msa0435900:intron 25.0%
! TTTGTAAACTCTAATTTCTC+TGG - chr3_2:89220598-89220617 None:intergenic 25.0%
! AAGTAGAGGAGAAAATAATT+TGG - chr3_2:89220642-89220661 None:intergenic 25.0%
!!! AACAAATCTTCTTTTAGAGA+GGG - chr3_2:89220667-89220686 None:intergenic 25.0%
!!! AAACAAATCTTCTTTTAGAG+AGG - chr3_2:89220668-89220687 None:intergenic 25.0%
!! TCTCTAAAAGAAGATTTGTT+TGG + chr3_2:89220667-89220686 Msa0435900:CDS 25.0%
!! GTAATGGGAAATATAATGTT+CGG + chr3_2:89220704-89220723 Msa0435900:CDS 25.0%
!! TACTCTCACTTCATTTTTCT+TGG + chr3_2:89216505-89216524 Msa0435900:CDS 30.0%
!! TCATACCCATGTTTTAAACA+CGG + chr3_2:89216642-89216661 Msa0435900:CDS 30.0%
! TAACACCGTGTTTAAAACAT+GGG - chr3_2:89216650-89216669 None:intergenic 30.0%
! TTAACACCGTGTTTAAAACA+TGG - chr3_2:89216651-89216670 None:intergenic 30.0%
!! TTTTAAACACGGTGTTAAGA+AGG + chr3_2:89216653-89216672 Msa0435900:CDS 30.0%
! TGAGTTGTTATTCAGGTATA+TGG + chr3_2:89217163-89217182 Msa0435900:intron 30.0%
TCAATTCATCCAACTGTAAT+AGG + chr3_2:89217268-89217287 Msa0435900:CDS 30.0%
! TGCTTTTCACATTTTTGTTG+GGG - chr3_2:89217308-89217327 None:intergenic 30.0%
AGCAAAGAAAGGAAAAGAAA+TGG + chr3_2:89217324-89217343 Msa0435900:intron 30.0%
! AAATGGCTTAATAGCACTTT+TGG + chr3_2:89217341-89217360 Msa0435900:intron 30.0%
! GCAATTTTTGCAAACATAGA+GGG - chr3_2:89217367-89217386 None:intergenic 30.0%
!! GAGTTTTGCCTTTTTTTTGT+TGG - chr3_2:89217433-89217452 None:intergenic 30.0%
! TCCTAATTTTGAATCACTCA+AGG + chr3_2:89217482-89217501 Msa0435900:intron 30.0%
TCCTTGAGTGATTCAAAATT+AGG - chr3_2:89217486-89217505 None:intergenic 30.0%
CAATGTTTGGAAATAATCAC+TGG + chr3_2:89217566-89217585 Msa0435900:intron 30.0%
AAATGTCAATCCGATTAAAC+TGG + chr3_2:89217608-89217627 Msa0435900:intron 30.0%
CGATTAAACTGGACAAAATT+AGG + chr3_2:89217619-89217638 Msa0435900:intron 30.0%
TTAACAACTGTACTTTGTGT+TGG - chr3_2:89218250-89218269 None:intergenic 30.0%
! TTCAAAAGTATAGAGCAAAG+TGG - chr3_2:89218430-89218449 None:intergenic 30.0%
! CTTTGCTCTATACTTTTGAA+AGG + chr3_2:89218430-89218449 Msa0435900:intron 30.0%
!! TGGTTTTCATTTTTGTTGGT+TGG - chr3_2:89218480-89218499 None:intergenic 30.0%
!!! CTGTTGGTTTTCATTTTTGT+TGG - chr3_2:89218484-89218503 None:intergenic 30.0%
!!! GGATTTGTTTTTGGTAAAAG+AGG + chr3_2:89218578-89218597 Msa0435900:intron 30.0%
! TTTGGTAATTGTTATTCTCC+AGG + chr3_2:89218683-89218702 Msa0435900:intron 30.0%
! TTGGTAATTGTTATTCTCCA+GGG + chr3_2:89218684-89218703 Msa0435900:intron 30.0%
TTGATAGAGGGGAAAATTTA+TGG - chr3_2:89218715-89218734 None:intergenic 30.0%
TAAGTCAACAATAGTTGTCT+TGG - chr3_2:89218774-89218793 None:intergenic 30.0%
CTTGTTCATATTATTGACCA+AGG + chr3_2:89219031-89219050 Msa0435900:CDS 30.0%
TTGTTGAATTGACATATTGG+AGG - chr3_2:89219123-89219142 None:intergenic 30.0%
TCCAATATGTCAATTCAACA+AGG + chr3_2:89219122-89219141 Msa0435900:CDS 30.0%
ACCTTGTTGAATTGACATAT+TGG - chr3_2:89219126-89219145 None:intergenic 30.0%
TGTCTAAGGACAAAAAAACT+TGG + chr3_2:89219342-89219361 Msa0435900:intron 30.0%
! ATTGACCACATTGATCTTTT+AGG + chr3_2:89219997-89220016 Msa0435900:intron 30.0%
TGAAATAACGCCAATTTGAA+TGG - chr3_2:89220089-89220108 None:intergenic 30.0%
! ATCTAGGATTGCATTACTTA+AGG - chr3_2:89220125-89220144 None:intergenic 30.0%
GCTAGATAGATATCATATCT+AGG - chr3_2:89220141-89220160 None:intergenic 30.0%
CTATGTAACACAAGTAGTTT+AGG - chr3_2:89220336-89220355 None:intergenic 30.0%
CTAAACTACTTGTGTTACAT+AGG + chr3_2:89220334-89220353 Msa0435900:CDS 30.0%
TGATCAATAGTTGAATCCTT+GGG - chr3_2:89220418-89220437 None:intergenic 30.0%
ATGATCAATAGTTGAATCCT+TGG - chr3_2:89220419-89220438 None:intergenic 30.0%
AATGAAGTTTGTGATTGCTA+TGG - chr3_2:89220464-89220483 None:intergenic 30.0%
ATAGCAATCACAAACTTCAT+TGG + chr3_2:89220463-89220482 Msa0435900:CDS 30.0%
ATCACAAACTTCATTGGTAA+AGG + chr3_2:89220469-89220488 Msa0435900:CDS 30.0%
ATTTGTTTGGATCCATTACA+TGG + chr3_2:89220680-89220699 Msa0435900:CDS 30.0%
TCATTCTCCAATTGAGTGAT+GGG - chr3_2:89216559-89216578 None:intergenic 35.0%
! ATGGGTATGATCTTTTCGAA+GGG - chr3_2:89216632-89216651 None:intergenic 35.0%
CTCGTACACAATTACAAACA+CGG + chr3_2:89216795-89216814 Msa0435900:CDS 35.0%
AATTACAAACACGGATTCTC+AGG + chr3_2:89216804-89216823 Msa0435900:CDS 35.0%
AATTCCAAGAACGTGTTGTA+TGG - chr3_2:89216920-89216939 None:intergenic 35.0%
ATTACGATGTCTGATGAAGA+GGG - chr3_2:89216996-89217015 None:intergenic 35.0%
AATTACGATGTCTGATGAAG+AGG - chr3_2:89216997-89217016 None:intergenic 35.0%
TCTTCATCAGACATCGTAAT+TGG + chr3_2:89216996-89217015 Msa0435900:CDS 35.0%
!! AAGTTTTTCAGACAAGGGAA+TGG + chr3_2:89217197-89217216 Msa0435900:CDS 35.0%
!! AGTTTTTCAGACAAGGGAAT+GGG + chr3_2:89217198-89217217 Msa0435900:CDS 35.0%
! TTCACATTTTTGTTGGGGAT+TGG - chr3_2:89217303-89217322 None:intergenic 35.0%
! CGCAATTTTTGCAAACATAG+AGG - chr3_2:89217368-89217387 None:intergenic 35.0%
GTCCTTAAGAATTTCAAGCA+CGG - chr3_2:89217518-89217537 None:intergenic 35.0%
CATGGAAATTGTTACCGTAA+TGG - chr3_2:89217808-89217827 None:intergenic 35.0%
TAAGGGATACATATGGACAT+GGG + chr3_2:89217909-89217928 Msa0435900:CDS 35.0%
!! CTTGGTTGTTTCTTTACTGT+TGG - chr3_2:89218500-89218519 None:intergenic 35.0%
AAGTCTCAATTTCTCTGTCT+TGG - chr3_2:89218518-89218537 None:intergenic 35.0%
!! CTAGCAGTTGGATTTGTTTT+TGG + chr3_2:89218569-89218588 Msa0435900:intron 35.0%
TCCGGTTATCAATGGATAAT+CGG - chr3_2:89218744-89218763 None:intergenic 35.0%
! CACCGTTTCAATTTTGTCAT+TGG - chr3_2:89218990-89219009 None:intergenic 35.0%
ACAAAATTGAAACGGTGCAA+GGG + chr3_2:89218993-89219012 Msa0435900:CDS 35.0%
ATTGACATATTGGAGGATTG+TGG - chr3_2:89219116-89219135 None:intergenic 35.0%
! ATTAATTTGAAGCAATCCGG+TGG + chr3_2:89219461-89219480 Msa0435900:intron 35.0%
!! ATATTTCTTGAAAGCGCTGA+AGG - chr3_2:89219561-89219580 None:intergenic 35.0%
!! GATTGGTAATGATGTAACTG+AGG + chr3_2:89219731-89219750 Msa0435900:CDS 35.0%
GATTTCATGTTATACGGTGA+GGG - chr3_2:89219774-89219793 None:intergenic 35.0%
TGATTTCATGTTATACGGTG+AGG - chr3_2:89219775-89219794 None:intergenic 35.0%
TCACCGTATAACATGAAATC+AGG + chr3_2:89219774-89219793 Msa0435900:CDS 35.0%
CACCGTATAACATGAAATCA+GGG + chr3_2:89219775-89219794 Msa0435900:CDS 35.0%
GTCCCTGATTTCATGTTATA+CGG - chr3_2:89219780-89219799 None:intergenic 35.0%
TAAATTTAATGCTGCCTGCA+AGG - chr3_2:89219830-89219849 None:intergenic 35.0%
AATGTGAAAAGTCTAACCAG+AGG - chr3_2:89219898-89219917 None:intergenic 35.0%
ATCGACCTAAAAGATCAATG+TGG - chr3_2:89220005-89220024 None:intergenic 35.0%
TAACGCCAATTTGAATGGTT+TGG - chr3_2:89220084-89220103 None:intergenic 35.0%
ATTGCCACACCATATGATTA+TGG + chr3_2:89220241-89220260 Msa0435900:CDS 35.0%
AGCAGGAGAAATAACAACAA+CGG + chr3_2:89220264-89220283 Msa0435900:CDS 35.0%
CAAGTAGTTTAGGTAGTCAA+TGG - chr3_2:89220326-89220345 None:intergenic 35.0%
CATAGGATTGAATACAACCA+CGG + chr3_2:89220351-89220370 Msa0435900:CDS 35.0%
GATCAATAGTTGAATCCTTG+GGG - chr3_2:89220417-89220436 None:intergenic 35.0%
AGTTTGTGATTGCTATGGAA+GGG - chr3_2:89220459-89220478 None:intergenic 35.0%
AAGTTTGTGATTGCTATGGA+AGG - chr3_2:89220460-89220479 None:intergenic 35.0%
!! CTAATTTCTCTGGAATCAAC+TGG - chr3_2:89220588-89220607 None:intergenic 35.0%
GATCCATTACATGGAGTAAT+GGG + chr3_2:89220689-89220708 Msa0435900:CDS 35.0%
TTTCCCATTACTCCATGTAA+TGG - chr3_2:89220695-89220714 None:intergenic 35.0%
ATTCTCCAATTGAGTGATGG+GGG - chr3_2:89216557-89216576 None:intergenic 40.0%
CATTCTCCAATTGAGTGATG+GGG - chr3_2:89216558-89216577 None:intergenic 40.0%
GTCATTCTCCAATTGAGTGA+TGG - chr3_2:89216560-89216579 None:intergenic 40.0%
! CATGGGTATGATCTTTTCGA+AGG - chr3_2:89216633-89216652 None:intergenic 40.0%
AACTCAATAGCTCAACAACC+TGG + chr3_2:89216858-89216877 Msa0435900:CDS 40.0%
GTTGTATGGAGCTTCAGAAT+GGG - chr3_2:89216906-89216925 None:intergenic 40.0%
TGTTGTATGGAGCTTCAGAA+TGG - chr3_2:89216907-89216926 None:intergenic 40.0%
TAGCGTAAGTTTGCGTTTCA+AGG - chr3_2:89216944-89216963 None:intergenic 40.0%
! GTAATTGGCCTGTTAGATAC+AGG + chr3_2:89217011-89217030 Msa0435900:CDS 40.0%
!! TCTGAAAAACTTGCTGCTTC+TGG - chr3_2:89217189-89217208 None:intergenic 40.0%
!! AGCAGCAAGTTTTTCAGACA+AGG + chr3_2:89217191-89217210 Msa0435900:CDS 40.0%
!! GCAGCAAGTTTTTCAGACAA+GGG + chr3_2:89217192-89217211 Msa0435900:CDS 40.0%
GACCGTGCTTGAAATTCTTA+AGG + chr3_2:89217513-89217532 Msa0435900:intron 40.0%
TTAGGAAGATAATCGGAGCA+AGG + chr3_2:89217843-89217862 Msa0435900:intron 40.0%
AAATGCTACCACAGCAAACA+CGG + chr3_2:89217886-89217905 Msa0435900:CDS 40.0%
AACACGGTAAGGGATACATA+TGG + chr3_2:89217902-89217921 Msa0435900:CDS 40.0%
GTAAGGGATACATATGGACA+TGG + chr3_2:89217908-89217927 Msa0435900:CDS 40.0%
! TGAAAGCACATCTACTCCAT+CGG - chr3_2:89218107-89218126 None:intergenic 40.0%
GCTGCAACAGTTAATATCCA+AGG - chr3_2:89218280-89218299 None:intergenic 40.0%
AGGTAGTAGCAAAGTTATCG+AGG + chr3_2:89218339-89218358 Msa0435900:CDS 40.0%
AATCCAACTGCTAGTTGACA+GGG - chr3_2:89218563-89218582 None:intergenic 40.0%
AAATCCAACTGCTAGTTGAC+AGG - chr3_2:89218564-89218583 None:intergenic 40.0%
! GAAAATTTATGGCTTTGCCC+TGG - chr3_2:89218704-89218723 None:intergenic 40.0%
AATCGGGAGACTTTGATAGA+GGG - chr3_2:89218727-89218746 None:intergenic 40.0%
TAATCGGGAGACTTTGATAG+AGG - chr3_2:89218728-89218747 None:intergenic 40.0%
CCGGTTATCAATGGATAATC+GGG - chr3_2:89218743-89218762 None:intergenic 40.0%
! CCCGATTATCCATTGATAAC+CGG + chr3_2:89218740-89218759 Msa0435900:CDS 40.0%
!! TTGTTGACTTAGCTGAAGCA+AGG + chr3_2:89218783-89218802 Msa0435900:CDS 40.0%
GGAAAGATTGTCATCTGTGA+TGG + chr3_2:89218944-89218963 Msa0435900:CDS 40.0%
GACAAAATTGAAACGGTGCA+AGG + chr3_2:89218992-89219011 Msa0435900:CDS 40.0%
TATTATTGACCAAGGAGCAG+AGG + chr3_2:89219039-89219058 Msa0435900:CDS 40.0%
!!! AATTTTTTGCCTCTGCTCCT+TGG - chr3_2:89219051-89219070 None:intergenic 40.0%
!! TTGGTCTTACAACTGTTGCT+GGG - chr3_2:89219084-89219103 None:intergenic 40.0%
!! TTTGGTCTTACAACTGTTGC+TGG - chr3_2:89219085-89219104 None:intergenic 40.0%
AGATTATAAGCCTGCACCTA+TGG + chr3_2:89219512-89219531 Msa0435900:CDS 40.0%
!!! TGGCAACCTTTTCAAGTAGA+GGG + chr3_2:89219535-89219554 Msa0435900:CDS 40.0%
GATGTAACTGAGGTTCCAAA+AGG + chr3_2:89219741-89219760 Msa0435900:CDS 40.0%
GACCTCAAATTCGTGGTAAT+GGG - chr3_2:89220220-89220239 None:intergenic 40.0%
TGACCTCAAATTCGTGGTAA+TGG - chr3_2:89220221-89220240 None:intergenic 40.0%
TGCTCCATAATCATATGGTG+TGG - chr3_2:89220248-89220267 None:intergenic 40.0%
ACACCATATGATTATGGAGC+AGG + chr3_2:89220247-89220266 Msa0435900:CDS 40.0%
TCTCCTGCTCCATAATCATA+TGG - chr3_2:89220253-89220272 None:intergenic 40.0%
CTAGTTTCATAAACTAGCCC+TGG - chr3_2:89220301-89220320 None:intergenic 40.0%
TTTGGAGATAATCTTCACCG+TGG - chr3_2:89220371-89220390 None:intergenic 40.0%
GACAATTCTGCTCACATTCT+TGG - chr3_2:89220497-89220516 None:intergenic 40.0%
AGCAGAATTGTCACAAACGT+TGG + chr3_2:89220505-89220524 Msa0435900:CDS 40.0%
!! TTTTAGAGAGGGCAAAGTAG+AGG - chr3_2:89220656-89220675 None:intergenic 40.0%
GGATCCATTACATGGAGTAA+TGG + chr3_2:89220688-89220707 Msa0435900:CDS 40.0%
! TTCTCCAATTGAGTGATGGG+GGG - chr3_2:89216556-89216575 None:intergenic 45.0%
AGCTCCATACAACACGTTCT+TGG + chr3_2:89216913-89216932 Msa0435900:CDS 45.0%
TGATGAAGAGGGAGAAGACT+TGG - chr3_2:89216985-89217004 None:intergenic 45.0%
TAGCATTTGCACCAGGGTTA+GGG - chr3_2:89217874-89217893 None:intergenic 45.0%
TACCACAGCAAACACGGTAA+GGG + chr3_2:89217892-89217911 Msa0435900:CDS 45.0%
AAATCGCTAACCTCGCTTCA+GGG - chr3_2:89218021-89218040 None:intergenic 45.0%
TAAATCGCTAACCTCGCTTC+AGG - chr3_2:89218022-89218041 None:intergenic 45.0%
GTGTGCTTTCCTTCCTGTTA+TGG + chr3_2:89218046-89218065 Msa0435900:CDS 45.0%
TTTCCTTCCTGTTATGGCTC+TGG + chr3_2:89218052-89218071 Msa0435900:CDS 45.0%
TTCCTTCCTGTTATGGCTCT+GGG + chr3_2:89218053-89218072 Msa0435900:CDS 45.0%
CACATCTACTCCATCGGAAA+TGG - chr3_2:89218101-89218120 None:intergenic 45.0%
GATGTGCTTTCAATCTCGCT+TGG + chr3_2:89218115-89218134 Msa0435900:CDS 45.0%
CAGTTGTTAATGACGCTCCT+TGG + chr3_2:89218260-89218279 Msa0435900:CDS 45.0%
CATATCACGATCGATGGTAG+TGG - chr3_2:89218302-89218321 None:intergenic 45.0%
ATGCAGTCCAACGTTGTCTT+AGG + chr3_2:89218319-89218338 Msa0435900:CDS 45.0%
GCTACTACCTAAGACAACGT+TGG - chr3_2:89218329-89218348 None:intergenic 45.0%
TAGTTGACAGGGACTGTGTT+TGG - chr3_2:89218552-89218571 None:intergenic 45.0%
ATGCTACATGTGCTCTCGTT+TGG + chr3_2:89218665-89218684 Msa0435900:intron 45.0%
ATCGGGAGACTTTGATAGAG+GGG - chr3_2:89218726-89218745 None:intergenic 45.0%
GCAGATTCTCCGGTTATCAA+TGG - chr3_2:89218752-89218771 None:intergenic 45.0%
AGTTGTCTTGGCAGATTCTC+CGG - chr3_2:89218762-89218781 None:intergenic 45.0%
AATTGAAACGGTGCAAGGGA+TGG + chr3_2:89218997-89219016 Msa0435900:CDS 45.0%
ATTGAAACGGTGCAAGGGAT+GGG + chr3_2:89218998-89219017 Msa0435900:CDS 45.0%
! AGGATTGTGGCAGCATCTTT+TGG - chr3_2:89219103-89219122 None:intergenic 45.0%
! GTTGGTAGAATTGTTGCCAC+CGG - chr3_2:89219480-89219499 None:intergenic 45.0%
TTATAAGCCTGCACCTATGG+TGG + chr3_2:89219515-89219534 Msa0435900:CDS 45.0%
CTTGAAAAGGTTGCCACCAT+AGG - chr3_2:89219531-89219550 None:intergenic 45.0%
!!! GTGGCAACCTTTTCAAGTAG+AGG + chr3_2:89219534-89219553 Msa0435900:CDS 45.0%
TGAAGGCCCTCTACTTGAAA+AGG - chr3_2:89219544-89219563 None:intergenic 45.0%
ACCAATCCATGCTGCAAGAA+TGG - chr3_2:89219718-89219737 None:intergenic 45.0%
! GGTGAGGGCTTTTTACCTTT+TGG - chr3_2:89219759-89219778 None:intergenic 45.0%
TGAAACATGTGGGCATGACA+TGG - chr3_2:89219805-89219824 None:intergenic 45.0%
ATGTCATGCCCACATGTTTC+AGG + chr3_2:89219804-89219823 Msa0435900:CDS 45.0%
AGTCTAACCAGAGGTCATGA+TGG - chr3_2:89219889-89219908 None:intergenic 45.0%
CTCCCATTACCACGAATTTG+AGG + chr3_2:89220215-89220234 Msa0435900:CDS 45.0%
GGCAATTGACCTCAAATTCG+TGG - chr3_2:89220227-89220246 None:intergenic 45.0%
TTTCATAAACTAGCCCTGGC+TGG - chr3_2:89220297-89220316 None:intergenic 45.0%
! GAAACTATCAGGGACGGTTT+TGG - chr3_2:89220389-89220408 None:intergenic 45.0%
GCAGTTGAAACTATCAGGGA+CGG - chr3_2:89220395-89220414 None:intergenic 45.0%
TGGGGCAGTTGAAACTATCA+GGG - chr3_2:89220399-89220418 None:intergenic 45.0%
TTGGGGCAGTTGAAACTATC+AGG - chr3_2:89220400-89220419 None:intergenic 45.0%
TGATAGTTTCAACTGCCCCA+AGG + chr3_2:89220399-89220418 Msa0435900:CDS 45.0%
! TGTCACAAACGTTGGTGAAG+AGG + chr3_2:89220513-89220532 Msa0435900:CDS 45.0%
! AACTGGATTTTCACCCCATC+GGG - chr3_2:89220571-89220590 None:intergenic 45.0%
! CAACTGGATTTTCACCCCAT+CGG - chr3_2:89220572-89220591 None:intergenic 45.0%
!!! TTAAAATTTTATATTTGTTT+TGG - chr3_2:89217697-89217716 None:intergenic 5.0%
!!! AACAAATATAAAATTTTAAT+TGG + chr3_2:89217698-89217717 Msa0435900:intron 5.0%
! TCTCCAATTGAGTGATGGGG+GGG - chr3_2:89216555-89216574 None:intergenic 50.0%
TGGAGTTGTGTCTGTCTTCC+CGG + chr3_2:89216878-89216897 Msa0435900:CDS 50.0%
TGGAGCTTCAGAATGGGATC+CGG - chr3_2:89216900-89216919 None:intergenic 50.0%
AGAGGGAGAAGACTTGGAGA+AGG - chr3_2:89216979-89216998 None:intergenic 50.0%
CCTTTCCAACCAGGTGGAAT+AGG - chr3_2:89217225-89217244 None:intergenic 50.0%
CCTATTCCACCTGGTTGGAA+AGG + chr3_2:89217222-89217241 Msa0435900:CDS 50.0%
ATGCAGATGCCTTTCCAACC+AGG - chr3_2:89217234-89217253 None:intergenic 50.0%
! GCAAGGTATTACCCTAACCC+TGG + chr3_2:89217860-89217879 Msa0435900:CDS 50.0%
GTAGCATTTGCACCAGGGTT+AGG - chr3_2:89217875-89217894 None:intergenic 50.0%
CTGTGGTAGCATTTGCACCA+GGG - chr3_2:89217880-89217899 None:intergenic 50.0%
CTACCACAGCAAACACGGTA+AGG + chr3_2:89217891-89217910 Msa0435900:CDS 50.0%
! ATCCCTTACCGTGTTTGCTG+TGG - chr3_2:89217897-89217916 None:intergenic 50.0%
GTGAGTGGTGCTTCGTACTA+TGG + chr3_2:89217965-89217984 Msa0435900:CDS 50.0%
TGGTGCTTCGTACTATGGTC+TGG + chr3_2:89217970-89217989 Msa0435900:CDS 50.0%
TCGTACTATGGTCTGGCAGA+AGG + chr3_2:89217977-89217996 Msa0435900:CDS 50.0%
CGTACTATGGTCTGGCAGAA+GGG + chr3_2:89217978-89217997 Msa0435900:CDS 50.0%
CAGAAGGGACAGCAAAAGGT+GGG + chr3_2:89217993-89218012 Msa0435900:CDS 50.0%
AATCGCTAACCTCGCTTCAG+GGG - chr3_2:89218020-89218039 None:intergenic 50.0%
ATCCCAGAGCCATAACAGGA+AGG - chr3_2:89218058-89218077 None:intergenic 50.0%
AAGGATCCCAGAGCCATAAC+AGG - chr3_2:89218062-89218081 None:intergenic 50.0%
! TTCGACGATGCCATTTCCGA+TGG + chr3_2:89218088-89218107 Msa0435900:CDS 50.0%
ATTGGGTCTGTCGTCAAGTC+TGG - chr3_2:89218160-89218179 None:intergenic 50.0%
ACGACAGACCCAATTGCGAT+CGG + chr3_2:89218166-89218185 Msa0435900:CDS 50.0%
GGAATGCTCCGATCGCAATT+GGG - chr3_2:89218177-89218196 None:intergenic 50.0%
TGGAATGCTCCGATCGCAAT+TGG - chr3_2:89218178-89218197 None:intergenic 50.0%
ATAGTGGTTGTTTGCTCCGC+TGG + chr3_2:89218214-89218233 Msa0435900:CDS 50.0%
TAGTGGTTGTTTGCTCCGCT+GGG + chr3_2:89218215-89218234 Msa0435900:CDS 50.0%
TGTTGGTCCATCATTCCCAG+CGG - chr3_2:89218233-89218252 None:intergenic 50.0%
GGACTGCATATCACGATCGA+TGG - chr3_2:89218308-89218327 None:intergenic 50.0%
! GGACTGTGTTTGGAGTTGTG+TGG - chr3_2:89218542-89218561 None:intergenic 50.0%
AGTCCCTGTCAACTAGCAGT+TGG + chr3_2:89218557-89218576 Msa0435900:intron 50.0%
TAGCCTGATATTGCAGCACC+AGG + chr3_2:89219687-89219706 Msa0435900:intron 50.0%
!! ACACCTGGTGCTGCAATATC+AGG - chr3_2:89219693-89219712 None:intergenic 50.0%
GTGTTGCCATTCTTGCAGCA+TGG + chr3_2:89219709-89219728 Msa0435900:CDS 50.0%
GCCATTCTTGCAGCATGGAT+TGG + chr3_2:89219714-89219733 Msa0435900:CDS 50.0%
CTGCAAGGCCTGAAACATGT+GGG - chr3_2:89219815-89219834 None:intergenic 50.0%
!! TTGCAGAGGCACTCCAAGTA+GGG - chr3_2:89219857-89219876 None:intergenic 50.0%
!! ATTGCAGAGGCACTCCAAGT+AGG - chr3_2:89219858-89219877 None:intergenic 50.0%
GAGTGCCTCTGCAATCAGAT+CGG + chr3_2:89219863-89219882 Msa0435900:CDS 50.0%
TAAACTAGCCCTGGCTGGAA+TGG - chr3_2:89220292-89220311 None:intergenic 50.0%
TGACCCCCCCATCACTCAAT+TGG + chr3_2:89216549-89216568 Msa0435900:CDS 55.0%
GGGAAGACAGACACAACTCC+AGG - chr3_2:89216879-89216898 None:intergenic 55.0%
GGAGCTTCAGAATGGGATCC+GGG - chr3_2:89216899-89216918 None:intergenic 55.0%
GGAATGGGTCCTATTCCACC+TGG + chr3_2:89217213-89217232 Msa0435900:CDS 55.0%
TGGGTCCTATTCCACCTGGT+TGG + chr3_2:89217217-89217236 Msa0435900:CDS 55.0%
CAGATGCCTTTCCAACCAGG+TGG - chr3_2:89217231-89217250 None:intergenic 55.0%
GCTGTGGTAGCATTTGCACC+AGG - chr3_2:89217881-89217900 None:intergenic 55.0%
TGCTGCTGTCGACGCTGTAT+GGG - chr3_2:89217936-89217955 None:intergenic 55.0%
!! ATACAGCGTCGACAGCAGCA+GGG + chr3_2:89217936-89217955 Msa0435900:CDS 55.0%
GCAGCAGGGAATGTTGTGAG+TGG + chr3_2:89217950-89217969 Msa0435900:CDS 55.0%
CTGGCAGAAGGGACAGCAAA+AGG + chr3_2:89217989-89218008 Msa0435900:CDS 55.0%
GCAGAAGGGACAGCAAAAGG+TGG + chr3_2:89217992-89218011 Msa0435900:CDS 55.0%
GGTCTGTCGTCAAGTCTGGT+CGG - chr3_2:89218156-89218175 None:intergenic 55.0%
! GATCGGAGCATTCCATGCTG+TGG + chr3_2:89218183-89218202 Msa0435900:CDS 55.0%
GCATTCCATGCTGTGGAGTG+CGG + chr3_2:89218190-89218209 Msa0435900:CDS 55.0%
GTTTGCTCCGCTGGGAATGA+TGG + chr3_2:89218223-89218242 Msa0435900:CDS 55.0%
! GTGCAAGGGATGGGTGGATT+AGG + chr3_2:89219007-89219026 Msa0435900:CDS 55.0%
AAGGTTGCCACCATAGGTGC+AGG - chr3_2:89219525-89219544 None:intergenic 55.0%
GCTGCAAGAATGGCAACACC+TGG - chr3_2:89219708-89219727 None:intergenic 55.0%
CCTGCAAGGCCTGAAACATG+TGG - chr3_2:89219816-89219835 None:intergenic 55.0%
CCACATGTTTCAGGCCTTGC+AGG + chr3_2:89219813-89219832 Msa0435900:CDS 55.0%
GATGGCCGATCTGATTGCAG+AGG - chr3_2:89219871-89219890 None:intergenic 55.0%
AGATCGGCCATCATGACCTC+TGG + chr3_2:89219879-89219898 Msa0435900:CDS 55.0%
ACAACGGAACCATTCCAGCC+AGG + chr3_2:89220280-89220299 Msa0435900:CDS 55.0%
CAACGGAACCATTCCAGCCA+GGG + chr3_2:89220281-89220300 Msa0435900:CDS 55.0%
CCATTGTCGATGCTCCCGAT+GGG + chr3_2:89220554-89220573 Msa0435900:CDS 55.0%
CATTGTCGATGCTCCCGATG+GGG + chr3_2:89220555-89220574 Msa0435900:CDS 55.0%
CTGCTGCTGTCGACGCTGTA+TGG - chr3_2:89217937-89217956 None:intergenic 60.0%
!! CATACAGCGTCGACAGCAGC+AGG + chr3_2:89217935-89217954 Msa0435900:CDS 60.0%
TGGCATCGTCGAACGCTGCA+AGG - chr3_2:89218081-89218100 None:intergenic 60.0%
CTATGCCGCACTCCACAGCA+TGG - chr3_2:89218198-89218217 None:intergenic 60.0%
TGCTGTGGAGTGCGGCATAG+TGG + chr3_2:89218198-89218217 Msa0435900:CDS 60.0%
GAAACGGTGCAAGGGATGGG+TGG + chr3_2:89219001-89219020 Msa0435900:CDS 60.0%
GCCATTGTCGATGCTCCCGA+TGG + chr3_2:89220553-89220572 Msa0435900:CDS 60.0%
!! CCCATCGGGAGCATCGACAA+TGG - chr3_2:89220557-89220576 None:intergenic 60.0%
AAGGTGGGTCCCCTGAAGCG+AGG + chr3_2:89218008-89218027 Msa0435900:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 89216440 89220750 89216440 ID=Msa0435900;Name=Msa0435900
chr3_2 mRNA 89216440 89220750 89216440 ID=Msa0435900-mRNA-1;Parent=Msa0435900;Name=Msa0435900-mRNA-1;_AED=0.36;_eAED=0.36;_QI=29|0.75|0.44|1|1|1|9|0|758
chr3_2 exon 89216440 89216674 89216440 ID=Msa0435900-mRNA-1:exon:26422;Parent=Msa0435900-mRNA-1
chr3_2 exon 89216782 89217032 89216782 ID=Msa0435900-mRNA-1:exon:26423;Parent=Msa0435900-mRNA-1
chr3_2 exon 89217178 89217289 89217178 ID=Msa0435900-mRNA-1:exon:26424;Parent=Msa0435900-mRNA-1
chr3_2 exon 89217847 89218360 89217847 ID=Msa0435900-mRNA-1:exon:26425;Parent=Msa0435900-mRNA-1
chr3_2 exon 89218737 89218804 89218737 ID=Msa0435900-mRNA-1:exon:26426;Parent=Msa0435900-mRNA-1
chr3_2 exon 89218904 89219143 89218904 ID=Msa0435900-mRNA-1:exon:26427;Parent=Msa0435900-mRNA-1
chr3_2 exon 89219473 89219587 89219473 ID=Msa0435900-mRNA-1:exon:26428;Parent=Msa0435900-mRNA-1
chr3_2 exon 89219690 89219900 89219690 ID=Msa0435900-mRNA-1:exon:26429;Parent=Msa0435900-mRNA-1
chr3_2 exon 89220191 89220750 89220191 ID=Msa0435900-mRNA-1:exon:26430;Parent=Msa0435900-mRNA-1
chr3_2 five_prime_UTR 89216440 89216468 89216440 ID=Msa0435900-mRNA-1:five_prime_utr;Parent=Msa0435900-mRNA-1
chr3_2 CDS 89216469 89216674 89216469 ID=Msa0435900-mRNA-1:cds;Parent=Msa0435900-mRNA-1
chr3_2 CDS 89216782 89217032 89216782 ID=Msa0435900-mRNA-1:cds;Parent=Msa0435900-mRNA-1
chr3_2 CDS 89217178 89217289 89217178 ID=Msa0435900-mRNA-1:cds;Parent=Msa0435900-mRNA-1
chr3_2 CDS 89217847 89218360 89217847 ID=Msa0435900-mRNA-1:cds;Parent=Msa0435900-mRNA-1
chr3_2 CDS 89218737 89218804 89218737 ID=Msa0435900-mRNA-1:cds;Parent=Msa0435900-mRNA-1
chr3_2 CDS 89218904 89219143 89218904 ID=Msa0435900-mRNA-1:cds;Parent=Msa0435900-mRNA-1
chr3_2 CDS 89219473 89219587 89219473 ID=Msa0435900-mRNA-1:cds;Parent=Msa0435900-mRNA-1
chr3_2 CDS 89219690 89219900 89219690 ID=Msa0435900-mRNA-1:cds;Parent=Msa0435900-mRNA-1
chr3_2 CDS 89220191 89220750 89220191 ID=Msa0435900-mRNA-1:cds;Parent=Msa0435900-mRNA-1
Gene Sequence

>Msa0435900

ATGAAAGGAAATCCACTCTTATTGATACTAATATTATACTCTCACTTCATTTTTCTTGGAGAGTCAAAATCATCTTCATATGACCCCCCCATCACTCAATTGGAGAATGACAAACAAGTTTATATTGTGTACATGGGAGCTGCAGATTCAACTAATAGTACCCTTCGAAAAGATCATACCCATGTTTTAAACACGGTGTTAAGAAGGAATGAAAAGGCTCTCGTACACAATTACAAACACGGATTCTCAGGTTTTGCAGCTCATTTATCAAAAAGTGAAGCAAACTCAATAGCTCAACAACCTGGAGTTGTGTCTGTCTTCCCGGATCCCATTCTGAAGCTCCATACAACACGTTCTTGGAATTTCCTTGAAACGCAAACTTACGCTAAAATTGAAAACACCTTCTCCAAGTCTTCTCCCTCTTCATCAGACATCGTAATTGGCCTGTTAGATACAGGTATATGGCCAGAAGCAGCAAGTTTTTCAGACAAGGGAATGGGTCCTATTCCACCTGGTTGGAAAGGCATCTGCATGACATCAAATGACTTCAATTCATCCAACTGTAATAGGAAGATAATCGGAGCAAGGTATTACCCTAACCCTGGTGCAAATGCTACCACAGCAAACACGGTAAGGGATACATATGGACATGGGACCCATACAGCGTCGACAGCAGCAGGGAATGTTGTGAGTGGTGCTTCGTACTATGGTCTGGCAGAAGGGACAGCAAAAGGTGGGTCCCCTGAAGCGAGGTTAGCGATTTACAAAGTGTGCTTTCCTTCCTGTTATGGCTCTGGGATCCTTGCAGCGTTCGACGATGCCATTTCCGATGGAGTAGATGTGCTTTCAATCTCGCTTGGAGCACATTCATTTTTCCGACCAGACTTGACGACAGACCCAATTGCGATCGGAGCATTCCATGCTGTGGAGTGCGGCATAGTGGTTGTTTGCTCCGCTGGGAATGATGGACCAACACAAAGTACAGTTGTTAATGACGCTCCTTGGATATTAACTGTTGCAGCCACTACCATCGATCGTGATATGCAGTCCAACGTTGTCTTAGGTAGTAGCAAAGTTATCGAGTCTCCCGATTATCCATTGATAACCGGAGAATCTGCCAAGACAACTATTGTTGACTTAGCTGAAGCAAGGAAGTGTCACCCAAATTCATTAGATATGAATAAAGTTAAAGGAAAGATTGTCATCTGTGATGGCATAGATGATGATTACTCAACCAATGACAAAATTGAAACGGTGCAAGGGATGGGTGGATTAGGTCTTGTTCATATTATTGACCAAGGAGCAGAGGCAAAAAATTATAAAGACTTCCCAGCAACAGTTGTAAGACCAAAAGATGCTGCCACAATCCTCCAATATGTCAATTCAACAAGCAATCCGGTGGCAACAATTCTACCAACAGTTACAATCATAGATTATAAGCCTGCACCTATGGTGGCAACCTTTTCAAGTAGAGGGCCTTCAGCGCTTTCAAGAAATATTCTAAAACCTGATATTGCAGCACCAGGTGTTGCCATTCTTGCAGCATGGATTGGTAATGATGTAACTGAGGTTCCAAAAGGTAAAAAGCCCTCACCGTATAACATGAAATCAGGGACTTCCATGTCATGCCCACATGTTTCAGGCCTTGCAGGCAGCATTAAATTTAAACACCCTACTTGGAGTGCCTCTGCAATCAGATCGGCCATCATGACCTCTGCAACTCAAATTAACAATATGAAGGCTCCCATTACCACGAATTTGAGGTCAATTGCCACACCATATGATTATGGAGCAGGAGAAATAACAACAACGGAACCATTCCAGCCAGGGCTAGTTTATGAAACTAGCACCATTGACTACCTAAACTACTTGTGTTACATAGGATTGAATACAACCACGGTGAAGATTATCTCCAAAACCGTCCCTGATAGTTTCAACTGCCCCAAGGATTCAACTATTGATCATGTCTCGAACATCAACTACCCTTCCATAGCAATCACAAACTTCATTGGTAAAGGAACCAAGAATGTGAGCAGAATTGTCACAAACGTTGGTGAAGAGGATGAAATAGTCTACACTGCCATTGTCGATGCTCCCGATGGGGTGAAAATCCAGTTGATTCCAGAGAAATTAGAGTTTACAAAAAATAGCAAAAAACTAAGCTACCAAATTATTTTCTCCTCTACTTTGCCCTCTCTAAAAGAAGATTTGTTTGGATCCATTACATGGAGTAATGGGAAATATAATGTTCGGAGTCCTTTTGTATTAACCGTGTAA
Protein sequence

>Msa0435900

MKGNPLLLILILYSHFIFLGESKSSSYDPPITQLENDKQVYIVYMGAADSTNSTLRKDHTHVLNTVLRRNEKALVHNYKHGFSGFAAHLSKSEANSIAQQPGVVSVFPDPILKLHTTRSWNFLETQTYAKIENTFSKSSPSSSDIVIGLLDTGIWPEAASFSDKGMGPIPPGWKGICMTSNDFNSSNCNRKIIGARYYPNPGANATTANTVRDTYGHGTHTASTAAGNVVSGASYYGLAEGTAKGGSPEARLAIYKVCFPSCYGSGILAAFDDAISDGVDVLSISLGAHSFFRPDLTTDPIAIGAFHAVECGIVVVCSAGNDGPTQSTVVNDAPWILTVAATTIDRDMQSNVVLGSSKVIESPDYPLITGESAKTTIVDLAEARKCHPNSLDMNKVKGKIVICDGIDDDYSTNDKIETVQGMGGLGLVHIIDQGAEAKNYKDFPATVVRPKDAATILQYVNSTSNPVATILPTVTIIDYKPAPMVATFSSRGPSALSRNILKPDIAAPGVAILAAWIGNDVTEVPKGKKPSPYNMKSGTSMSCPHVSGLAGSIKFKHPTWSASAIRSAIMTSATQINNMKAPITTNLRSIATPYDYGAGEITTTEPFQPGLVYETSTIDYLNYLCYIGLNTTTVKIISKTVPDSFNCPKDSTIDHVSNINYPSIAITNFIGKGTKNVSRIVTNVGEEDEIVYTAIVDAPDGVKIQLIPEKLEFTKNSKKLSYQIIFSSTLPSLKEDLFGSITWSNGKYNVRSPFVLTV*