AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0479530

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0479530 MtrunA17_Chr3g0142941 96.477 369 12 1 1 368 1 369 0.0 719
Msa0479530 MtrunA17_Chr1g0156931 69.061 362 110 2 5 366 1 360 0.0 532
Msa0479530 MtrunA17_Chr1g0156891 65.242 351 120 2 15 363 11 361 1.61e-175 492
Msa0479530 MtrunA17_Chr3g0142921 64.789 355 121 2 16 366 3 357 1.05e-170 479
Msa0479530 MtrunA17_Chr1g0156901 60.665 361 140 1 8 366 10 370 8.85e-169 475
Msa0479530 MtrunA17_Chr1g0156911 59.483 348 140 1 16 363 8 354 2.01e-161 456
Msa0479530 MtrunA17_Chr1g0156921 58.739 349 143 1 19 366 15 363 1.20e-157 447
Msa0479530 MtrunA17_Chr5g0405821 54.624 346 153 4 17 359 15 359 1.41e-132 383
Msa0479530 MtrunA17_Chr8g0371491 51.906 341 163 1 24 363 14 354 1.61e-132 383
Msa0479530 MtrunA17_Chr5g0405831 52.679 336 157 2 26 359 23 358 2.43e-127 370
Msa0479530 MtrunA17_Chr8g0371481 50.000 366 166 5 5 361 1 358 1.12e-122 358
Msa0479530 MtrunA17_Chr8g0371471 51.170 342 164 2 23 361 16 357 5.36e-122 356
Msa0479530 MtrunA17_Chr5g0438621 45.483 321 170 2 44 361 28 346 2.56e-100 301
Msa0479530 MtrunA17_Chr5g0438631 43.125 320 180 2 44 361 26 345 1.49e-93 283
Msa0479530 MtrunA17_Chr1g0157001 43.450 313 174 2 51 362 41 351 4.99e-93 283
Msa0479530 MtrunA17_Chr5g0432101 44.136 324 174 3 46 362 33 356 9.31e-90 274
Msa0479530 MtrunA17_Chr2g0283191 43.425 327 175 4 44 360 36 362 1.61e-88 271
Msa0479530 MtrunA17_Chr4g0046151 39.776 357 202 3 6 354 1 352 1.99e-88 271
Msa0479530 MtrunA17_Chr3g0105401 36.571 350 220 2 19 366 1 350 4.06e-87 267
Msa0479530 MtrunA17_Chr2g0320671 42.165 351 191 4 6 355 1 340 1.05e-86 266
Msa0479530 MtrunA17_Chr8g0341001 41.071 336 194 3 22 355 10 343 2.77e-85 262
Msa0479530 MtrunA17_Chr3g0120861 43.464 306 172 1 44 348 36 341 4.96e-85 262
Msa0479530 MtrunA17_Chr5g0438641 38.636 352 206 3 17 363 8 354 1.53e-81 253
Msa0479530 MtrunA17_Chr2g0330781 40.498 321 189 2 41 359 26 346 1.24e-80 250
Msa0479530 MtrunA17_Chr5g0437421 40.625 320 180 4 44 355 30 347 6.79e-80 249
Msa0479530 MtrunA17_Chr4g0027521 37.188 320 197 3 44 359 25 344 2.00e-65 211
Msa0479530 MtrunA17_Chr2g0285061 35.161 310 194 5 44 349 30 336 1.99e-63 206
Msa0479530 MtrunA17_Chr1g0182811 32.692 364 214 8 1 355 4 345 1.89e-59 196
Msa0479530 MtrunA17_Chr7g0275021 31.755 359 229 8 6 359 1 348 4.56e-59 195
Msa0479530 MtrunA17_Chr7g0275011 34.049 326 200 6 42 359 30 348 7.09e-59 195
Msa0479530 MtrunA17_Chr3g0086641 32.827 329 212 6 23 348 18 340 9.51e-59 194
Msa0479530 MtrunA17_Chr3g0077571 35.691 311 190 7 43 350 27 330 1.88e-58 193
Msa0479530 MtrunA17_Chr8g0380041 33.871 310 197 5 44 349 29 334 2.23e-58 193
Msa0479530 MtrunA17_Chr4g0008851 33.642 324 198 6 42 355 28 344 2.37e-57 191
Msa0479530 MtrunA17_Chr1g0189901 33.648 318 196 6 46 355 31 341 4.42e-57 190
Msa0479530 MtrunA17_Chr7g0274991 32.647 340 211 7 24 355 14 343 2.30e-56 188
Msa0479530 MtrunA17_Chr6g0463261 68.033 122 39 0 98 219 3 124 4.96e-56 179
Msa0479530 MtrunA17_Chr7g0275001 32.915 319 206 4 46 359 25 340 4.91e-55 184
Msa0479530 MtrunA17_Chr4g0017431 30.931 333 225 4 21 350 6 336 1.55e-54 183
Msa0479530 MtrunA17_Chr3g0077581 32.822 326 205 9 32 348 22 342 1.63e-54 183
Msa0479530 MtrunA17_Chr1g0189931 33.746 323 197 6 46 359 32 346 5.66e-54 182
Msa0479530 MtrunA17_Chr5g0434621 34.740 308 186 8 50 350 29 328 1.21e-53 181
Msa0479530 MtrunA17_Chr3g0092131 33.229 319 205 7 50 364 27 341 5.81e-53 179
Msa0479530 MtrunA17_Chr6g0457921 32.602 319 205 6 47 359 30 344 3.62e-52 177
Msa0479530 MtrunA17_Chr3g0131321 30.347 346 229 5 16 356 10 348 7.16e-52 177
Msa0479530 MtrunA17_Chr8g0374101 31.765 340 220 7 19 349 12 348 2.64e-51 175
Msa0479530 MtrunA17_Chr2g0294301 34.483 319 199 6 37 349 26 340 5.94e-51 174
Msa0479530 MtrunA17_Chr4g0060811 32.399 321 209 7 50 366 31 347 1.40e-50 173
Msa0479530 MtrunA17_Chr1g0189891 32.812 320 199 7 46 359 29 338 8.37e-50 171
Msa0479530 MtrunA17_Chr4g0068441 33.433 335 209 7 20 349 15 340 9.63e-49 168
Msa0479530 MtrunA17_Chr3g0099161 32.386 352 218 9 15 355 62 404 1.06e-48 169
Msa0479530 MtrunA17_Chr7g0215961 30.218 321 198 6 46 359 33 334 3.86e-47 164
Msa0479530 MtrunA17_Chr3g0099151 32.768 354 213 10 16 355 58 400 1.10e-46 164
Msa0479530 MtrunA17_Chr2g0294311 32.915 319 196 7 45 349 31 345 1.26e-46 162
Msa0479530 MtrunA17_Chr4g0027571 39.252 214 129 1 148 360 2 215 6.15e-46 157
Msa0479530 MtrunA17_Chr3g0099231 31.988 322 201 8 44 355 26 339 7.69e-46 161
Msa0479530 MtrunA17_Chr5g0396511 30.968 310 207 4 51 356 51 357 1.25e-44 157
Msa0479530 MtrunA17_Chr2g0301641 31.356 354 222 7 17 358 14 358 3.39e-44 157
Msa0479530 MtrunA17_Chr8g0380031 31.928 332 207 8 22 350 63 378 5.44e-43 154
Msa0479530 MtrunA17_Chr8g0344941 32.704 318 202 6 46 356 41 353 2.67e-42 151
Msa0479530 MtrunA17_Chr2g0284991 32.440 336 208 11 21 349 7 330 8.95e-42 150
Msa0479530 MtrunA17_Chr2g0284921 32.484 314 192 8 44 350 32 332 2.12e-41 149
Msa0479530 MtrunA17_Chr5g0444401 30.982 326 200 8 44 355 26 340 2.35e-41 148
Msa0479530 MtrunA17_Chr3g0085881 31.847 314 188 10 44 350 31 325 2.20e-40 145
Msa0479530 MtrunA17_Chr8g0344931 31.132 318 202 7 46 358 37 342 2.00e-39 143
Msa0479530 MtrunA17_Chr2g0284951 32.239 335 204 12 22 349 8 326 7.51e-39 142
Msa0479530 MtrunA17_Chr5g0420811 32.733 333 194 12 24 348 15 325 1.12e-38 141
Msa0479530 MtrunA17_Chr8g0349341 32.164 342 209 11 23 352 10 340 4.58e-37 137
Msa0479530 MtrunA17_Chr7g0229591 38.537 205 120 1 15 219 5 203 6.01e-36 130
Msa0479530 MtrunA17_Chr8g0349321 32.278 316 193 10 46 352 37 340 1.34e-35 133
Msa0479530 MtrunA17_Chr7g0229581 45.390 141 76 1 221 360 8 148 8.82e-35 125
Msa0479530 MtrunA17_Chr8g0370981 29.095 409 218 13 23 368 19 418 4.56e-34 130
Msa0479530 MtrunA17_Chr2g0284941 30.503 318 174 11 44 351 31 311 6.91e-34 128
Msa0479530 MtrunA17_Chr8g0370951 28.653 349 215 11 21 348 4 339 4.44e-33 126
Msa0479530 MtrunA17_Chr3g0085231 30.473 338 204 10 19 350 12 324 1.13e-32 125
Msa0479530 MtrunA17_Chr2g0285001 30.368 326 199 14 44 358 31 339 3.02e-32 124
Msa0479530 MtrunA17_Chr1g0160011 30.663 362 211 14 17 349 7 357 1.62e-31 122
Msa0479530 MtrunA17_Chr8g0349301 31.788 302 187 10 23 317 10 299 1.87e-31 121
Msa0479530 MtrunA17_Chr1g0160031 29.769 346 203 13 41 359 34 366 3.47e-29 116
Msa0479530 MtrunA17_Chr8g0349331 28.704 324 178 8 41 352 26 308 8.32e-29 114
Msa0479530 MtrunA17_Chr2g0301581 32.219 329 182 13 46 355 34 340 6.54e-28 112
Msa0479530 MtrunA17_Chr1g0159991 29.539 369 215 14 16 352 3 358 1.54e-27 111
Msa0479530 MtrunA17_Chr4g0018571 38.462 156 95 1 209 363 19 174 2.02e-27 106
Msa0479530 MtrunA17_Chr6g0469511 48.214 112 58 0 44 155 28 139 6.10e-27 104
Msa0479530 MtrunA17_Chr2g0283481 30.081 369 226 14 4 352 10 366 8.67e-27 110
Msa0479530 MtrunA17_Chr3g0104821 29.499 339 196 15 46 356 44 367 1.95e-26 108
Msa0479530 MtrunA17_Chr7g0273101 27.507 349 210 12 41 359 24 359 2.26e-26 108
Msa0479530 MtrunA17_Chr2g0301541 31.611 329 184 13 46 355 34 340 3.13e-26 107
Msa0479530 MtrunA17_Chr2g0283511 30.247 324 197 13 51 352 36 352 5.29e-26 107
Msa0479530 MtrunA17_Chr8g0370961 28.571 238 153 6 140 366 11 242 8.21e-26 103
Msa0479530 MtrunA17_Chr7g0254461 26.596 376 231 13 15 359 15 376 8.82e-26 107
Msa0479530 MtrunA17_Chr6g0469521 43.802 121 67 1 221 340 32 152 1.32e-24 98.2
Msa0479530 MtrunA17_Chr1g0191461 26.012 346 222 9 41 361 26 362 2.41e-24 102
Msa0479530 MtrunA17_Chr1g0159981 27.346 373 227 16 4 349 10 365 2.87e-24 102
Msa0479530 MtrunA17_Chr4g0027561 46.721 122 59 1 16 137 6 121 3.21e-24 97.1
Msa0479530 MtrunA17_Chr1g0159971 26.933 375 222 15 13 352 12 369 4.34e-24 102
Msa0479530 MtrunA17_Chr7g0271551 28.571 336 199 15 45 359 34 349 8.46e-24 100
Msa0479530 MtrunA17_Chr1g0160101 28.495 372 209 16 17 349 9 362 1.13e-23 100
Msa0479530 MtrunA17_Chr6g0459921 33.023 215 132 5 144 351 127 336 1.33e-23 100
Msa0479530 MtrunA17_Chr8g0381581 25.989 354 217 13 41 362 35 375 5.70e-23 99.0
Msa0479530 MtrunA17_Chr2g0283501 29.499 339 203 15 46 359 31 358 6.42e-23 98.6
Msa0479530 MtrunA17_Chr6g0455661 32.093 215 134 5 144 351 238 447 1.13e-22 99.0
Msa0479530 MtrunA17_Chr6g0455661 38.400 125 66 4 24 143 6 124 1.51e-14 74.7
Msa0479530 MtrunA17_Chr7g0275291 27.344 384 216 14 13 359 3 360 1.81e-22 97.4
Msa0479530 MtrunA17_Chr3g0112821 27.301 326 211 12 46 355 30 345 1.65e-21 94.7
Msa0479530 MtrunA17_Chr6g0450731 26.944 360 226 13 15 356 2 342 1.86e-21 94.4
Msa0479530 MtrunA17_Chr7g0226941 26.496 351 213 12 40 359 27 363 2.36e-20 91.3
Msa0479530 MtrunA17_Chr2g0301551 30.742 283 158 11 92 355 33 296 3.83e-20 90.1
Msa0479530 MtrunA17_Chr2g0317271 26.496 351 225 13 21 356 6 338 8.15e-20 89.7
Msa0479530 MtrunA17_Chr4g0027581 35.135 148 73 2 236 360 41 188 1.08e-19 86.7
Msa0479530 MtrunA17_Chr6g0450701 25.858 379 230 12 15 359 2 363 1.12e-19 89.4
Msa0479530 MtrunA17_Chr6g0450721 26.741 359 226 12 15 356 2 340 1.28e-19 89.0
Msa0479530 MtrunA17_Chr2g0301571 30.389 283 159 12 92 355 33 296 1.87e-19 87.8
Msa0479530 MtrunA17_Chr3g0093031 26.866 335 206 15 46 355 30 350 2.02e-19 88.6
Msa0479530 MtrunA17_Chr0c01g0489571 26.857 350 223 13 22 356 7 338 2.68e-19 88.2
Msa0479530 MtrunA17_Chr2g0317261 26.611 357 227 14 15 356 2 338 3.37e-19 87.8
Msa0479530 MtrunA17_Chr0c01g0489581 26.571 350 224 13 22 356 7 338 4.12e-19 87.4
Msa0479530 MtrunA17_Chr1g0198351 25.439 342 210 13 41 366 38 350 5.92e-19 87.0
Msa0479530 MtrunA17_Chr8g0347751 26.437 348 206 14 46 359 36 367 3.77e-18 85.1
Msa0479530 MtrunA17_Chr6g0450711 27.879 330 197 11 45 348 121 435 6.04e-18 85.1
Msa0479530 MtrunA17_Chr1g0178941 26.911 327 202 14 47 354 41 349 3.48e-17 82.0
Msa0479530 MtrunA17_Chr1g0189921 47.126 87 45 1 46 132 31 116 3.49e-17 77.8
Msa0479530 MtrunA17_Chr8g0352901 25.469 373 233 13 15 359 2 357 5.44e-17 81.6
Msa0479530 MtrunA17_Chr7g0266061 26.727 333 194 18 44 354 40 344 9.77e-17 80.5
Msa0479530 MtrunA17_Chr5g0440501 22.535 213 158 3 145 350 10 222 1.10e-16 79.0
Msa0479530 MtrunA17_Chr1g0178931 26.852 324 198 13 47 354 38 338 1.59e-16 79.7
Msa0479530 MtrunA17_Chr2g0283531 26.870 361 231 14 20 355 1 353 1.68e-16 80.1
Msa0479530 MtrunA17_Chr4g0057991 24.866 374 242 15 9 359 3 360 3.15e-16 79.3
Msa0479530 MtrunA17_Chr2g0321991 37.815 119 70 3 15 132 4 119 9.81e-16 73.2
Msa0479530 MtrunA17_Chr5g0432081 50.000 62 27 1 305 362 10 71 1.57e-15 71.2
Msa0479530 MtrunA17_Chr2g0301591 30.935 278 145 11 46 304 34 283 1.58e-15 76.3
Msa0479530 MtrunA17_Chr3g0112691 26.239 343 204 18 46 359 30 352 5.56e-15 75.5
Msa0479530 MtrunA17_Chr8g0370971 41.304 92 50 1 45 132 37 128 6.93e-14 68.9
Msa0479530 MtrunA17_Chr3g0104831 26.460 291 174 14 94 356 8 286 9.12e-14 71.2
Msa0479530 MtrunA17_Chr7g0228261 41.538 65 38 0 295 359 10 74 1.41e-13 66.2
Msa0479530 MtrunA17_Chr4g0018561 64.583 48 17 0 44 91 28 75 5.92e-13 64.7
Msa0479530 MtrunA17_Chr2g0308201 49.367 79 31 2 19 97 16 85 1.07e-12 63.5
Msa0479530 MtrunA17_Chr3g0096551 25.714 350 203 14 46 355 29 361 2.10e-12 67.8
Msa0479530 MtrunA17_Chr8g0339251 23.754 341 225 11 15 339 2 323 4.51e-12 66.6
Msa0479530 MtrunA17_Chr1g0189911 30.303 99 69 0 261 359 30 128 6.84e-12 62.8
Msa0479530 MtrunA17_Chr2g0301561 30.303 231 135 9 92 305 33 254 3.97e-11 62.8
Msa0479530 MtrunA17_Chr3g0104801 34.286 140 79 5 46 178 44 177 5.91e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0479530 AT1G75900.1 59.130 345 139 2 23 366 20 363 4.08e-152 433
Msa0479530 AT1G75880.2 53.571 364 165 2 7 366 10 373 1.38e-137 397
Msa0479530 AT1G75880.1 53.699 365 164 3 7 366 10 374 2.71e-136 393
Msa0479530 AT1G75890.2 52.326 344 162 2 22 363 23 366 9.68e-134 387
Msa0479530 AT1G75890.3 52.326 344 162 2 22 363 52 395 1.48e-133 387
Msa0479530 AT5G42170.1 54.217 332 148 2 36 366 40 368 4.57e-132 382
Msa0479530 AT1G75890.1 50.420 357 162 3 22 363 23 379 2.61e-130 378
Msa0479530 AT3G14820.1 54.467 347 153 3 17 362 3 345 3.32e-130 377
Msa0479530 AT1G59406.1 51.989 352 161 6 17 366 3 348 3.67e-125 364
Msa0479530 AT1G59030.1 51.989 352 161 6 17 366 3 348 3.67e-125 364
Msa0479530 AT1G58725.1 51.989 352 161 6 17 366 3 348 3.67e-125 364
Msa0479530 AT1G58520.3 52.252 333 146 5 36 366 20 341 5.13e-116 340
Msa0479530 AT1G58525.1 52.252 333 146 5 36 366 20 341 5.13e-116 340
Msa0479530 AT3G43570.1 48.555 346 144 5 22 366 7 319 9.81e-114 334
Msa0479530 AT1G20120.1 50.621 322 158 1 34 354 66 387 2.12e-113 336
Msa0479530 AT1G20132.1 47.706 327 170 1 41 366 56 382 9.86e-105 313
Msa0479530 AT3G43550.1 53.333 285 127 4 22 305 7 286 4.98e-100 298
Msa0479530 AT1G73610.1 43.220 354 181 5 19 366 4 343 9.08e-95 286
Msa0479530 AT5G63170.1 47.097 310 149 4 44 351 26 322 1.59e-92 281
Msa0479530 AT5G45960.1 42.769 325 181 2 43 362 44 368 1.64e-92 282
Msa0479530 AT1G23500.1 47.040 321 155 4 41 359 30 337 1.04e-90 276
Msa0479530 AT1G06990.1 40.000 345 194 4 17 351 3 344 2.61e-90 276
Msa0479530 AT2G30310.1 42.813 327 184 3 45 368 33 359 7.12e-89 272
Msa0479530 AT2G31540.1 39.888 356 210 4 16 368 6 360 3.23e-88 270
Msa0479530 AT2G04570.1 41.745 321 178 3 35 348 13 331 7.09e-88 269
Msa0479530 AT1G20130.2 40.533 338 187 3 41 367 179 513 1.54e-87 273
Msa0479530 AT1G20130.1 40.533 338 187 3 41 367 199 533 2.07e-87 274
Msa0479530 AT2G30220.1 41.618 346 196 4 12 354 2 344 8.62e-87 266
Msa0479530 AT5G03810.1 43.408 311 174 2 44 352 28 338 3.63e-86 265
Msa0479530 AT2G40250.1 42.553 329 180 4 40 361 30 356 4.39e-86 265
Msa0479530 AT2G24560.1 42.258 310 176 3 45 351 33 342 2.31e-85 263
Msa0479530 AT5G22810.1 43.125 320 178 2 44 359 32 351 5.59e-85 262
Msa0479530 AT1G58430.1 40.118 339 200 3 33 368 22 360 3.47e-84 260
Msa0479530 AT2G42990.1 40.260 308 179 2 44 348 26 331 1.59e-83 258
Msa0479530 AT4G26790.1 39.818 329 195 3 36 362 18 345 3.07e-83 257
Msa0479530 AT4G26790.2 39.818 329 195 3 36 362 18 345 3.07e-83 257
Msa0479530 AT1G20135.1 42.038 314 169 5 43 355 26 327 1.62e-82 254
Msa0479530 AT3G16370.1 41.195 318 185 2 44 359 28 345 6.51e-82 254
Msa0479530 AT5G03820.1 41.379 319 184 2 44 359 31 349 2.98e-80 250
Msa0479530 AT5G03820.2 41.987 312 178 2 44 352 59 370 9.51e-80 249
Msa0479530 AT3G53100.1 39.812 319 191 1 44 361 27 345 7.21e-78 243
Msa0479530 AT1G75920.2 39.701 335 189 5 23 354 6 330 1.47e-75 237
Msa0479530 AT1G75920.1 38.000 350 189 6 23 354 1 340 1.55e-71 227
Msa0479530 AT1G75910.1 38.486 317 183 4 41 354 23 330 1.24e-70 224
Msa0479530 AT5G45950.1 38.298 329 198 4 27 355 21 344 9.28e-70 223
Msa0479530 AT1G75930.1 39.117 317 176 6 41 352 24 328 4.66e-64 207
Msa0479530 AT2G24560.2 40.530 264 154 3 45 305 33 296 4.25e-62 202
Msa0479530 AT1G75920.4 38.889 288 163 5 70 354 25 302 5.58e-62 201
Msa0479530 AT4G28780.1 32.188 320 214 3 46 363 31 349 5.81e-60 198
Msa0479530 AT5G33370.1 34.066 364 215 8 11 363 2 351 7.55e-60 197
Msa0479530 AT1G29670.1 32.738 336 217 6 19 350 5 335 1.07e-58 194
Msa0479530 AT5G45670.1 32.239 335 217 7 20 350 6 334 3.19e-58 193
Msa0479530 AT1G29670.2 32.738 336 217 6 19 350 73 403 6.79e-58 194
Msa0479530 AT1G71691.2 37.621 311 183 8 44 350 53 356 3.05e-57 191
Msa0479530 AT1G75920.3 34.328 335 176 6 23 354 6 299 1.21e-56 187
Msa0479530 AT1G33811.1 32.277 347 219 10 17 350 1 344 3.15e-56 188
Msa0479530 AT5G08460.1 33.119 311 201 5 45 349 48 357 2.48e-55 186
Msa0479530 AT4G18970.1 32.476 311 203 5 44 350 26 333 3.04e-55 185
Msa0479530 AT5G18430.1 30.836 347 228 4 18 359 5 344 8.75e-55 184
Msa0479530 AT4G18970.2 32.476 311 203 5 44 350 26 333 1.06e-54 185
Msa0479530 AT5G15720.1 35.000 320 196 8 44 356 28 342 4.11e-54 182
Msa0479530 AT3G50400.1 31.105 344 228 6 16 350 4 347 9.55e-54 182
Msa0479530 AT3G04290.1 31.515 330 211 6 38 359 21 343 3.97e-53 180
Msa0479530 AT1G71250.1 31.325 332 219 5 25 349 16 345 1.34e-52 179
Msa0479530 AT2G31550.1 38.813 219 132 2 152 368 1 219 1.94e-52 174
Msa0479530 AT2G23540.1 31.921 354 226 8 10 350 9 360 9.59e-52 177
Msa0479530 AT5G55050.1 34.545 330 198 9 42 359 35 358 1.29e-51 176
Msa0479530 AT1G74460.1 32.278 316 206 7 50 361 27 338 2.44e-51 175
Msa0479530 AT5G41890.1 35.220 318 185 7 50 350 35 348 5.78e-51 174
Msa0479530 AT5G37690.1 30.814 344 224 8 17 355 1 335 1.31e-50 173
Msa0479530 AT1G29660.1 30.631 333 217 7 22 350 14 336 3.48e-50 172
Msa0479530 AT5G37690.2 29.942 344 219 9 17 355 1 327 1.13e-45 160
Msa0479530 AT4G10950.2 29.712 313 209 5 44 350 69 376 1.57e-45 161
Msa0479530 AT1G71120.1 33.228 316 195 8 43 352 28 333 5.50e-45 158
Msa0479530 AT2G19010.1 32.907 313 187 9 44 350 28 323 7.81e-45 157
Msa0479530 AT2G19010.2 32.907 313 187 9 44 350 58 353 1.15e-44 158
Msa0479530 AT1G53920.1 30.205 341 225 7 25 358 27 361 2.26e-43 155
Msa0479530 AT2G19060.1 31.737 334 198 13 44 368 28 340 3.53e-43 153
Msa0479530 AT5G33370.2 33.993 303 178 7 11 305 2 290 5.26e-43 152
Msa0479530 AT4G10950.1 29.712 313 205 6 44 350 69 372 5.76e-43 154
Msa0479530 AT2G19050.1 30.791 354 213 13 24 368 9 339 1.72e-42 151
Msa0479530 AT1G53940.2 31.098 328 201 10 46 358 39 356 5.18e-38 140
Msa0479530 AT4G30140.1 32.907 313 185 12 44 350 31 324 6.53e-38 139
Msa0479530 AT2G03980.2 33.544 316 185 12 45 348 42 344 7.20e-38 140
Msa0479530 AT2G03980.3 33.544 316 185 12 45 348 42 344 7.20e-38 140
Msa0479530 AT2G03980.1 33.544 316 185 12 45 348 42 344 7.20e-38 140
Msa0479530 AT2G03980.4 33.544 316 185 12 45 348 42 344 7.20e-38 140
Msa0479530 AT5G40990.1 31.056 322 209 7 46 358 37 354 4.83e-37 137
Msa0479530 AT1G71691.3 36.090 266 159 8 44 305 53 311 9.64e-37 135
Msa0479530 AT3G14225.1 29.012 324 217 6 46 358 37 358 1.29e-36 136
Msa0479530 AT5G15720.2 34.201 269 166 7 44 305 28 292 1.23e-35 132
Msa0479530 AT3G14225.2 28.793 323 217 6 46 359 37 355 1.39e-35 134
Msa0479530 AT1G71691.1 32.432 259 165 7 96 350 3 255 5.05e-35 130
Msa0479530 AT4G16230.1 39.024 205 119 4 44 244 28 230 1.07e-34 128
Msa0479530 AT1G54790.3 27.467 375 224 13 15 359 6 362 3.24e-33 127
Msa0479530 AT5G15720.3 31.395 258 168 6 106 356 56 311 3.54e-33 126
Msa0479530 AT2G19050.2 31.273 275 170 9 24 292 9 270 6.84e-32 122
Msa0479530 AT3G05180.1 28.739 341 208 9 45 359 35 366 1.15e-31 123
Msa0479530 AT1G53990.1 28.399 331 199 12 46 358 35 345 1.72e-31 122
Msa0479530 AT1G28590.1 29.315 365 213 15 16 352 9 356 3.54e-29 117
Msa0479530 AT1G28610.2 31.054 351 185 17 44 359 29 357 4.67e-28 113
Msa0479530 AT5G14450.1 27.419 372 229 11 16 359 13 371 8.04e-28 113
Msa0479530 AT2G04020.1 35.577 208 111 7 45 242 42 236 1.17e-27 110
Msa0479530 AT1G53940.1 32.103 271 167 8 46 308 39 300 1.21e-27 110
Msa0479530 AT2G04020.2 35.577 208 111 7 45 242 42 236 5.51e-27 109
Msa0479530 AT2G27360.1 31.395 344 191 14 46 359 33 361 7.49e-27 110
Msa0479530 AT1G28580.1 28.232 379 221 15 14 359 4 364 2.48e-26 108
Msa0479530 AT1G28640.1 28.108 370 231 15 15 359 3 362 3.53e-26 108
Msa0479530 AT1G54790.1 25.000 368 231 13 23 359 8 361 1.07e-25 107
Msa0479530 AT3G26430.1 29.261 352 186 14 40 350 25 354 5.58e-25 105
Msa0479530 AT1G28600.1 28.726 369 227 14 13 359 3 357 6.78e-25 105
Msa0479530 AT1G56670.1 28.986 345 200 15 45 365 39 362 7.22e-25 104
Msa0479530 AT1G31550.2 29.794 339 193 16 46 355 36 358 3.04e-24 103
Msa0479530 AT1G28650.1 27.095 358 232 11 24 359 14 364 4.44e-24 102
Msa0479530 AT1G28670.1 28.455 369 232 13 15 359 3 363 1.08e-23 101
Msa0479530 AT4G01130.1 26.247 381 219 15 16 359 10 365 3.61e-23 99.8
Msa0479530 AT1G09390.1 28.889 360 220 14 10 350 2 344 3.68e-23 99.8
Msa0479530 AT1G54030.1 28.383 303 195 9 47 348 53 334 4.38e-23 100
Msa0479530 AT1G28570.1 28.351 388 222 15 1 359 1 361 4.00e-22 97.1
Msa0479530 AT1G31550.1 28.994 338 194 16 46 355 36 355 7.28e-22 96.3
Msa0479530 AT1G54020.2 26.879 346 218 13 24 359 11 331 1.09e-21 95.5
Msa0479530 AT1G28660.1 27.807 374 227 15 15 359 3 362 1.59e-21 95.1
Msa0479530 AT1G54790.2 24.365 394 227 16 23 359 8 387 8.95e-21 93.2
Msa0479530 AT1G54000.1 26.389 360 231 11 24 367 14 355 9.32e-21 93.2
Msa0479530 AT1G67830.1 25.215 349 214 13 45 360 29 363 1.31e-20 92.4
Msa0479530 AT5G03610.1 25.846 325 208 11 47 358 44 348 1.58e-20 92.0
Msa0479530 AT5G45910.1 28.831 385 219 19 20 367 1 367 1.82e-20 92.0
Msa0479530 AT1G28660.2 27.807 374 226 16 15 359 3 361 2.77e-20 91.7
Msa0479530 AT3G48460.1 26.110 383 230 16 8 359 1 361 9.43e-20 90.1
Msa0479530 AT3G62280.1 29.532 342 188 17 45 359 35 350 1.79e-19 89.0
Msa0479530 AT4G01130.3 27.915 283 165 10 110 359 3 279 4.58e-19 87.0
Msa0479530 AT1G54010.1 25.000 332 225 9 24 348 14 328 4.68e-19 88.2
Msa0479530 AT3G27950.1 27.273 352 217 12 23 350 10 346 1.01e-18 87.0
Msa0479530 AT4G16233.1 40.217 92 54 1 259 349 11 102 1.66e-16 75.9
Msa0479530 AT1G56670.2 29.286 280 158 13 45 305 39 297 5.15e-16 78.2
Msa0479530 AT4G01130.2 26.087 345 202 15 16 332 10 329 2.37e-15 76.6
Msa0479530 AT4G16220.1 44.944 89 47 1 44 132 28 114 4.17e-15 74.7
Msa0479530 AT1G54030.2 27.308 260 169 7 47 305 53 293 1.70e-14 73.9
Msa0479530 AT3G14220.1 24.204 314 208 9 45 348 31 324 5.30e-13 70.1
Msa0479530 AT1G54020.1 25.191 262 168 10 107 359 3 245 2.89e-12 67.0
Msa0479530 AT1G54020.5 25.191 262 168 10 107 359 3 245 2.89e-12 67.0
Msa0479530 AT1G54020.3 25.191 262 168 10 107 359 3 245 2.89e-12 67.0
Msa0479530 AT2G36325.1 26.074 326 208 12 47 360 48 352 3.84e-12 67.4
Msa0479530 AT3G62280.2 29.670 273 138 15 45 292 35 278 1.36e-11 65.1
Msa0479530 AT1G28610.1 34.270 178 88 9 44 204 29 194 3.24e-11 63.5

Find 95 sgRNAs with CRISPR-Local

Find 227 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTAATAATGTTAAGCTATT+TGG 0.115219 3_3:+84529919 None:intergenic
ATAATTCAGAATACATATTT+TGG 0.133098 3_3:-84526312 Msa0479530:CDS
GTCAATCGTCCCACATATTT+TGG 0.164760 3_3:+84526235 None:intergenic
GAATTAATTGACAATGAAAA+AGG 0.234523 3_3:-84525941 None:intergenic
CATCTGTTCACAATTGTAAT+TGG 0.237565 3_3:-84526143 Msa0479530:three_prime_UTR
AGATCACTTGGTTTGAGATT+TGG 0.260309 3_3:+84527163 None:intergenic
GTTCCTGCACTCATAGCTTT+TGG 0.270619 3_3:-84529829 Msa0479530:CDS
AATATAAATGACCCTACTAT+TGG 0.297842 3_3:+84526554 None:intergenic
CAGAGGCTCCTTTGACCATT+AGG 0.304522 3_3:+84526772 None:intergenic
TGCTTTGCTTCTGGTGCATC+TGG 0.313289 3_3:-84527127 Msa0479530:CDS
TGCTTCATTGTACTTCTCAT+TGG 0.323253 3_3:+84526635 None:intergenic
AAGTGCAATTTCCCTCCTTA+TGG 0.329907 3_3:-84529757 Msa0479530:CDS
ACTGGAGTATGCTTTGCTTC+TGG 0.338515 3_3:-84527136 Msa0479530:CDS
GTGGCTTTATTGAGTATGTT+TGG 0.349669 3_3:-84526104 Msa0479530:three_prime_UTR
CAACTTGGAGCACGCAGAAT+TGG 0.361534 3_3:-84526729 Msa0479530:CDS
AAGCTTTCTGTATACACTTT+CGG 0.369467 3_3:+84526273 None:intergenic
CATCACTTCCAGCTACTATA+AGG 0.370304 3_3:+84526862 None:intergenic
ACTCTAACTTGCCCAATAGT+AGG 0.371094 3_3:-84526566 Msa0479530:CDS
GGATATAAAGTTGCGGATAA+AGG 0.374731 3_3:-84526400 Msa0479530:CDS
TTGTTCTCAGTTGAAGAGTT+AGG 0.379803 3_3:-84527217 Msa0479530:intron
GAATACATAGGGAAGCTTAA+AGG 0.381894 3_3:-84526933 Msa0479530:CDS
GTGTTTAGTGCAGCACCTAT+TGG 0.383258 3_3:-84526705 Msa0479530:CDS
AATATGTATTCTGAATTATC+AGG 0.387799 3_3:+84526316 None:intergenic
GGAGATTCTATCATGGATAC+AGG 0.388121 3_3:-84529808 Msa0479530:CDS
AGGTGTGGTTGGAGAGAATA+GGG 0.393629 3_3:-84526913 Msa0479530:CDS
ATCTATATGTTGAAATTTGA+GGG 0.398940 3_3:-84526031 Msa0479530:three_prime_UTR
AATCTATATGTTGAAATTTG+AGG 0.399158 3_3:-84526032 Msa0479530:three_prime_UTR
CTTGCTGAACTCTCTCTATA+TGG 0.400568 3_3:-84529977 Msa0479530:exon
AAATCAGTCGGTGATTTCAT+TGG 0.402412 3_3:-84526979 Msa0479530:intron
ATATAAATGACCCTACTATT+GGG 0.404016 3_3:+84526555 None:intergenic
TCCTGCTTATGCTGACCTAA+TGG 0.419830 3_3:-84526787 Msa0479530:CDS
TGTTTAGTGCAGCACCTATT+GGG 0.429138 3_3:-84526704 Msa0479530:CDS
CCCTCAAAATCTTGACCATA+AGG 0.434979 3_3:+84529742 None:intergenic
CTTGAGAATGATATCAAGTA+AGG 0.448541 3_3:+84526518 None:intergenic
CCGTTGCAAAATCGACCTGT+TGG 0.457925 3_3:+84529712 None:intergenic
TTTGAACATCTTTAGTTGAT+CGG 0.472275 3_3:+84526956 None:intergenic
GATAAAGGTTGTTGTGGTAC+AGG 0.474471 3_3:-84526385 Msa0479530:CDS
CTCAAAACTCTCCAAGGAGT+TGG 0.477244 3_3:-84526598 Msa0479530:CDS
TGTGATGGTAAGTACCCAAT+AGG 0.480072 3_3:+84526690 None:intergenic
TTTGAGGGAGGGATTCCAAC+AGG 0.480838 3_3:-84529727 Msa0479530:CDS
ACCATTAGGTCAGCATAAGC+AGG 0.481452 3_3:+84526786 None:intergenic
TCCTTTAACGCCTAAAATAG+TGG 0.484726 3_3:-84527098 Msa0479530:intron
AAACCAAGTGATCTTCCTAC+TGG 0.495930 3_3:-84527154 Msa0479530:CDS
CTTACCATCACAGAAGACTC+TGG 0.498993 3_3:-84526679 Msa0479530:CDS
TGTAGTTCTTCCAAAATATG+TGG 0.502597 3_3:-84526245 Msa0479530:CDS
AGATTTGGATCCAAATAAGC+TGG 0.507343 3_3:+84527178 None:intergenic
GTGAAGACAATCCAACTCCT+TGG 0.512392 3_3:+84526587 None:intergenic
AACATCGTAGTGTAGTTGTC+TGG 0.513752 3_3:+84526809 None:intergenic
TACTATAAGGAAAAGAGCAT+TGG 0.517983 3_3:+84526875 None:intergenic
CTCTAACTTGCCCAATAGTA+GGG 0.518740 3_3:-84526565 Msa0479530:CDS
TTTCTGTATACACTTTCGGT+TGG 0.527788 3_3:+84526277 None:intergenic
TATATACCTATCAAGTCTGA+TGG 0.528276 3_3:+84529682 None:intergenic
CAGGACAAGTGGCACTCAAA+GGG 0.531905 3_3:+84526335 None:intergenic
AAGGTGTGGTTGGAGAGAAT+AGG 0.534567 3_3:-84526914 Msa0479530:CDS
ATCACAGAAGACTCTGGGTG+GGG 0.535042 3_3:-84526673 Msa0479530:CDS
ATTAAGGAAATATATCAACT+TGG 0.538446 3_3:-84526744 Msa0479530:CDS
GGGAAGCTTAAAGGTGTGGT+TGG 0.540826 3_3:-84526924 Msa0479530:CDS
ATCGTATAGAACGAATGCAT+TGG 0.545694 3_3:-84529875 Msa0479530:CDS
AGATGTTCAAAGAATACATA+GGG 0.550769 3_3:-84526944 Msa0479530:CDS
TCAGGACAAGTGGCACTCAA+AGG 0.553804 3_3:+84526334 None:intergenic
GCGAATAGTAAAATAAGTGT+TGG 0.555686 3_3:+84526833 None:intergenic
TCTCCAAAAGCTATGAGTGC+AGG 0.557089 3_3:+84529826 None:intergenic
GCAGGAACTGTAACATTTGG+TGG 0.559617 3_3:+84529844 None:intergenic
AAGATGTTCAAAGAATACAT+AGG 0.571188 3_3:-84526945 Msa0479530:CDS
TTCTGAATTATCAGGACAAG+TGG 0.574457 3_3:+84526324 None:intergenic
GTTGCGGATAAAGGTTGTTG+TGG 0.574838 3_3:-84526391 Msa0479530:CDS
AGTGCAGGAACTGTAACATT+TGG 0.575059 3_3:+84529841 None:intergenic
CTATTTGGTGAATAAGTGCT+AGG 0.575285 3_3:+84529934 None:intergenic
ATTCAACTCAAAACTCTCCA+AGG 0.578411 3_3:-84526604 Msa0479530:CDS
TAGTAAAATAAGTGTTGGCA+AGG 0.583102 3_3:+84526838 None:intergenic
GAGGGGTTGAACTTACTACA+AGG 0.584717 3_3:-84526013 Msa0479530:three_prime_UTR
TAAGGAAAAGAGCATTGGCT+AGG 0.585423 3_3:+84526880 None:intergenic
GAAGCAAAGCATACTCCAGT+AGG 0.590600 3_3:+84527139 None:intergenic
TTGGAGTGTGAAACTGCATA+TGG 0.594535 3_3:-84526085 Msa0479530:three_prime_UTR
CCACCCAGAGTCTTCTGTGA+TGG 0.596110 3_3:+84526675 None:intergenic
TCTATATGTTGAAATTTGAG+GGG 0.598354 3_3:-84526030 Msa0479530:three_prime_UTR
CAAAATCTTGACCATAAGGA+GGG 0.599329 3_3:+84529746 None:intergenic
TCACAGAAGACTCTGGGTGG+GGG 0.605987 3_3:-84526672 Msa0479530:CDS
TATGCTGACCTAATGGTCAA+AGG 0.606777 3_3:-84526780 Msa0479530:CDS
TTACCATCACAGAAGACTCT+GGG 0.606984 3_3:-84526678 Msa0479530:CDS
ATATAGAGAGAGTTCAGCAA+GGG 0.613794 3_3:+84529979 None:intergenic
CATAGGGAAGCTTAAAGGTG+TGG 0.614858 3_3:-84526928 Msa0479530:CDS
GTAGTTCTTCCAAAATATGT+GGG 0.614981 3_3:-84526244 Msa0479530:CDS
ACTCCAGTAGGAAGATCACT+TGG 0.616310 3_3:+84527151 None:intergenic
TATTTCCTTAATAAAATCAG+AGG 0.620327 3_3:+84526755 None:intergenic
TCAAAATCTTGACCATAAGG+AGG 0.620952 3_3:+84529745 None:intergenic
TTGAGAATGATATCAAGTAA+GGG 0.622870 3_3:+84526519 None:intergenic
CATCACAGAAGACTCTGGGT+GGG 0.629743 3_3:-84526674 Msa0479530:CDS
TTGTGGTACAGGAAAGCTAG+AGG 0.630213 3_3:-84526374 Msa0479530:CDS
AGGGGTTGAACTTACTACAA+GGG 0.632273 3_3:-84526012 Msa0479530:three_prime_UTR
AAGTGTATACAGAAAGCTTG+TGG 0.647850 3_3:-84526269 Msa0479530:CDS
AAATGCAGGATATAAAGTTG+CGG 0.654000 3_3:-84526407 Msa0479530:intron
CATATAGAGAGAGTTCAGCA+AGG 0.663146 3_3:+84529978 None:intergenic
CCATCACAGAAGACTCTGGG+TGG 0.676081 3_3:-84526675 Msa0479530:CDS
CATACTCAATAAAGCCACTG+TGG 0.714366 3_3:+84526109 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATGAATTTTTTATTTTTTGA+AGG + chr3_3:84526376-84526395 None:intergenic 10.0%
!! ATAAAAAATTCATATCTATA+TGG - chr3_3:84526383-84526402 Msa0479530:CDS 10.0%
!! ATTATTTACAGTATATAATT+AGG + chr3_3:84526744-84526763 None:intergenic 10.0%
!!! ATAGTTTTTGTATAATTAAT+TGG - chr3_3:84527874-84527893 Msa0479530:intron 10.0%
!! AATTAATTATATACTAAAGT+TGG + chr3_3:84528982-84529001 None:intergenic 10.0%
!! AAAAAAAAAGAGGAAAAAAA+TGG + chr3_3:84527698-84527717 None:intergenic 15.0%
!!! TGTGTTAACAATAATTTTAT+GGG + chr3_3:84527810-84527829 None:intergenic 15.0%
!!! TTGTGTTAACAATAATTTTA+TGG + chr3_3:84527811-84527830 None:intergenic 15.0%
!! AAAATTAAGATTGAATAGTT+GGG - chr3_3:84528113-84528132 Msa0479530:intron 15.0%
!! TTTCTGATATATATATATAG+AGG + chr3_3:84528324-84528343 None:intergenic 15.0%
!! TTTGTAATATTCATTAAATG+TGG + chr3_3:84528472-84528491 None:intergenic 15.0%
!! TTATATTCAACAAAACTTTA+AGG + chr3_3:84528528-84528547 None:intergenic 15.0%
!!! CATGCATTTTTTTTTATATT+TGG + chr3_3:84528681-84528700 None:intergenic 15.0%
!! TCATATAGTAATTAATTACT+TGG - chr3_3:84528757-84528776 Msa0479530:intron 15.0%
!!! AATTTTTTTTACAAATCAGT+CGG - chr3_3:84529006-84529025 Msa0479530:intron 15.0%
!!! TAATTACTTACCATATTTTT+GGG + chr3_3:84529506-84529525 None:intergenic 15.0%
!!! TTAATTACTTACCATATTTT+TGG + chr3_3:84529507-84529526 None:intergenic 15.0%
!! CATTTAATGACTTATATATT+AGG + chr3_3:84529575-84529594 None:intergenic 15.0%
!!! ATAATTCAGAATACATATTT+TGG - chr3_3:84529685-84529704 Msa0479530:intron 15.0%
!!! TAATTCAGAATACATATTTT+GGG - chr3_3:84529686-84529705 Msa0479530:intron 15.0%
!!! AAGCTTGATTTAAAATGTTA+AGG + chr3_3:84526485-84526504 None:intergenic 20.0%
!!! AAACAAAATTTTCAAGGTTT+TGG + chr3_3:84526664-84526683 None:intergenic 20.0%
!!! TGTGAATTTTTAAATCACAA+AGG + chr3_3:84526973-84526992 None:intergenic 20.0%
!! TAAAAATTCACATATTTGCT+TGG - chr3_3:84526981-84527000 Msa0479530:intron 20.0%
!! AAGAAAAAAGTAGTTGAAAA+CGG - chr3_3:84527309-84527328 Msa0479530:intron 20.0%
!!! ATTTTCTACTATTTTGAACT+AGG + chr3_3:84527458-84527477 None:intergenic 20.0%
!! AAAAAAATGGAATTGTAACA+AGG + chr3_3:84527685-84527704 None:intergenic 20.0%
!! TCGTAAAAGAAAAAAAAAAG+AGG + chr3_3:84527708-84527727 None:intergenic 20.0%
!! ATTATATTGGTATGAAACAT+TGG - chr3_3:84527769-84527788 Msa0479530:intron 20.0%
!! TTATTGTTAACACAAACTTA+TGG - chr3_3:84527816-84527835 Msa0479530:intron 20.0%
!! TATTGTTAACACAAACTTAT+GGG - chr3_3:84527817-84527836 Msa0479530:intron 20.0%
!! GAAAATTAAGATTGAATAGT+TGG - chr3_3:84528112-84528131 Msa0479530:intron 20.0%
!! AACCACTCAATTAAAATAAA+CGG + chr3_3:84528249-84528268 None:intergenic 20.0%
!!! TTCTTTCTTTTAGTGAAATA+GGG + chr3_3:84528426-84528445 None:intergenic 20.0%
!!! TTTCTTTCTTTTAGTGAAAT+AGG + chr3_3:84528427-84528446 None:intergenic 20.0%
!! TATTTCCTTAATAAAATCAG+AGG + chr3_3:84529245-84529264 None:intergenic 20.0%
!! ATTAAGGAAATATATCAACT+TGG - chr3_3:84529253-84529272 Msa0479530:intron 20.0%
!!! AATTACTTACCATATTTTTG+GGG + chr3_3:84529505-84529524 None:intergenic 20.0%
!! ATATATAAGTCATTAAATGC+AGG - chr3_3:84529576-84529595 Msa0479530:intron 20.0%
!! AATATGTATTCTGAATTATC+AGG + chr3_3:84529684-84529703 None:intergenic 20.0%
!! AATCTATATGTTGAAATTTG+AGG - chr3_3:84529965-84529984 Msa0479530:exon 20.0%
!! ATCTATATGTTGAAATTTGA+GGG - chr3_3:84529966-84529985 Msa0479530:exon 20.0%
! CGTAATAATGTTAAGCTATT+TGG + chr3_3:84526081-84526100 None:intergenic 25.0%
! AATGTTAAGGTTGTAAAACA+AGG + chr3_3:84526472-84526491 None:intergenic 25.0%
! AGTGTTAAACATTGATAAAG+TGG - chr3_3:84526507-84526526 Msa0479530:CDS 25.0%
!! ACACACAAACAAAATTTTCA+AGG + chr3_3:84526670-84526689 None:intergenic 25.0%
!!! TTTTTTGTTGTCAAAAGATC+AGG - chr3_3:84526878-84526897 Msa0479530:CDS 25.0%
! TTGTATCGAAATTCAATCAT+TGG - chr3_3:84526928-84526947 Msa0479530:CDS 25.0%
! TTAAATCACAAAGGTTTCAT+TGG + chr3_3:84526964-84526983 None:intergenic 25.0%
!!! TGTTTTTTTTACTGATAACG+TGG - chr3_3:84527358-84527377 Msa0479530:intron 25.0%
! TTTGAACTAGGATTAACTAA+AGG + chr3_3:84527446-84527465 None:intergenic 25.0%
!! TTTTATAATGAGAGATGAGA+GGG - chr3_3:84527559-84527578 Msa0479530:intron 25.0%
! TAACTAAAATTATCAAGTCC+AGG + chr3_3:84527913-84527932 None:intergenic 25.0%
! GTTAGTTAGATCTAAACAAA+AGG - chr3_3:84527929-84527948 Msa0479530:intron 25.0%
! AAGAAACCTAGAATATCAAA+GGG - chr3_3:84527964-84527983 Msa0479530:intron 25.0%
! TAAGAATTGTTGAAGAAAGA+AGG - chr3_3:84527991-84528010 Msa0479530:intron 25.0%
! AATTGCTGAAGAAAAAAGAT+AGG - chr3_3:84528040-84528059 Msa0479530:intron 25.0%
!!! ATTTTAGAAGAAAGAAGAAG+CGG - chr3_3:84528152-84528171 Msa0479530:intron 25.0%
! TACTTATTATAAGAGATGAG+AGG + chr3_3:84528282-84528301 None:intergenic 25.0%
! ATATCTCATGAAATACTACT+TGG - chr3_3:84528373-84528392 Msa0479530:intron 25.0%
! TTGAATTAACTTTGTCATTG+TGG - chr3_3:84528623-84528642 Msa0479530:intron 25.0%
! TGAATTAACTTTGTCATTGT+GGG - chr3_3:84528624-84528643 Msa0479530:intron 25.0%
! TTTGAACATCTTTAGTTGAT+CGG + chr3_3:84529044-84529063 None:intergenic 25.0%
! AAGATGTTCAAAGAATACAT+AGG - chr3_3:84529052-84529071 Msa0479530:intron 25.0%
! AGATGTTCAAAGAATACATA+GGG - chr3_3:84529053-84529072 Msa0479530:intron 25.0%
! ATATAAATGACCCTACTATT+GGG + chr3_3:84529445-84529464 None:intergenic 25.0%
! AATATAAATGACCCTACTAT+TGG + chr3_3:84529446-84529465 None:intergenic 25.0%
! TTGAGAATGATATCAAGTAA+GGG + chr3_3:84529481-84529500 None:intergenic 25.0%
! TCTATATGTTGAAATTTGAG+GGG - chr3_3:84529967-84529986 Msa0479530:exon 25.0%
AAAAATCCATCAGACTTGAT+AGG - chr3_3:84526309-84526328 Msa0479530:CDS 30.0%
TATATACCTATCAAGTCTGA+TGG + chr3_3:84526318-84526337 None:intergenic 30.0%
!!! ATTTTCAAGGTTTTGGCTTT+GGG + chr3_3:84526657-84526676 None:intergenic 30.0%
!!! AATTTTCAAGGTTTTGGCTT+TGG + chr3_3:84526658-84526677 None:intergenic 30.0%
!!! CTTTTTAATTTGACACCTTC+TGG - chr3_3:84526692-84526711 Msa0479530:CDS 30.0%
!!! TGATTAGTTTTTTCTCCAGA+AGG + chr3_3:84526710-84526729 None:intergenic 30.0%
! ACCAAATGAAAACGATGTTT+TGG - chr3_3:84527009-84527028 Msa0479530:intron 30.0%
! ACCAAAACATCGTTTTCATT+TGG + chr3_3:84527013-84527032 None:intergenic 30.0%
ATTAATTGAGCCTCATTAGA+AGG - chr3_3:84527040-84527059 Msa0479530:intron 30.0%
AAAAGTTAAAAACACAAGCC+TGG + chr3_3:84527241-84527260 None:intergenic 30.0%
ATTGCTAGTAGAGAATAATG+TGG - chr3_3:84527333-84527352 Msa0479530:intron 30.0%
! CTTTTATAATGAGAGATGAG+AGG - chr3_3:84527558-84527577 Msa0479530:intron 30.0%
!! CCTTTTCATTTTAATCATCC+AGG + chr3_3:84527742-84527761 None:intergenic 30.0%
CCTGGATGATTAAAATGAAA+AGG - chr3_3:84527739-84527758 Msa0479530:intron 30.0%
AAAAGGCTGCAAGATTATAT+TGG - chr3_3:84527756-84527775 Msa0479530:intron 30.0%
CAAGAAACCTAGAATATCAA+AGG - chr3_3:84527963-84527982 Msa0479530:intron 30.0%
AGAAACCTAGAATATCAAAG+GGG - chr3_3:84527965-84527984 Msa0479530:intron 30.0%
TAAATCCCCTTTGATATTCT+AGG + chr3_3:84527973-84527992 None:intergenic 30.0%
GAAAAAAGATAGGAACATCA+TGG - chr3_3:84528050-84528069 Msa0479530:intron 30.0%
TTAAGATTGAATAGTTGGGT+AGG - chr3_3:84528117-84528136 Msa0479530:intron 30.0%
AAGGTTAAGAAGATACAATG+TGG - chr3_3:84528193-84528212 Msa0479530:intron 30.0%
!!! AGCCGTTTATTTTAATTGAG+TGG - chr3_3:84528244-84528263 Msa0479530:intron 30.0%
ATAGGGTATGTTTACTCTAA+CGG + chr3_3:84528409-84528428 None:intergenic 30.0%
! TTCATCCATACCACTATTTT+AGG + chr3_3:84528912-84528931 None:intergenic 30.0%
! TACTATAAGGAAAAGAGCAT+TGG + chr3_3:84529125-84529144 None:intergenic 30.0%
!! TAGTAAAATAAGTGTTGGCA+AGG + chr3_3:84529162-84529181 None:intergenic 30.0%
GCGAATAGTAAAATAAGTGT+TGG + chr3_3:84529167-84529186 None:intergenic 30.0%
!!! GAGTTTTGAGTTGAATAACT+TGG + chr3_3:84529389-84529408 None:intergenic 30.0%
CTTGAGAATGATATCAAGTA+AGG + chr3_3:84529482-84529501 None:intergenic 30.0%
AAATGCAGGATATAAAGTTG+CGG - chr3_3:84529590-84529609 Msa0479530:intron 30.0%
AAGCTTTCTGTATACACTTT+CGG + chr3_3:84529727-84529746 None:intergenic 30.0%
TGTAGTTCTTCCAAAATATG+TGG - chr3_3:84529752-84529771 Msa0479530:CDS 30.0%
GTAGTTCTTCCAAAATATGT+GGG - chr3_3:84529753-84529772 Msa0479530:CDS 30.0%
CATCTGTTCACAATTGTAAT+TGG - chr3_3:84529854-84529873 Msa0479530:CDS 30.0%
! TGTCCTCTAAAAACAAAACA+TGG + chr3_3:84529938-84529957 None:intergenic 30.0%
!!! GGATAGCTTTTTCATCTCTT+TGG + chr3_3:84526000-84526019 None:intergenic 35.0%
ATATAGAGAGAGTTCAGCAA+GGG + chr3_3:84526021-84526040 None:intergenic 35.0%
! CTATTTGGTGAATAAGTGCT+AGG + chr3_3:84526066-84526085 None:intergenic 35.0%
ATCGTATAGAACGAATGCAT+TGG - chr3_3:84526122-84526141 Msa0479530:three_prime_UTR 35.0%
!! AGCTTTTGGAGATTCTATCA+TGG - chr3_3:84526182-84526201 Msa0479530:three_prime_UTR 35.0%
CAAAATCTTGACCATAAGGA+GGG + chr3_3:84526254-84526273 None:intergenic 35.0%
TCAAAATCTTGACCATAAGG+AGG + chr3_3:84526255-84526274 None:intergenic 35.0%
! TCCTTATGGTCAAGATTTTG+AGG - chr3_3:84526254-84526273 Msa0479530:CDS 35.0%
! CCTTATGGTCAAGATTTTGA+GGG - chr3_3:84526255-84526274 Msa0479530:CDS 35.0%
CTTCTTTCGTCATTGTCATA+TGG - chr3_3:84526585-84526604 Msa0479530:CDS 35.0%
!!! TTTTCAAGGTTTTGGCTTTG+GGG + chr3_3:84526656-84526675 None:intergenic 35.0%
TTGTTGTCAAAAGATCAGGA+AGG - chr3_3:84526882-84526901 Msa0479530:CDS 35.0%
TTGAATGAGTGATACGTCAA+TGG - chr3_3:84527135-84527154 Msa0479530:CDS 35.0%
!! AGAGCAAGGCATTTTTATCA+TGG - chr3_3:84527160-84527179 Msa0479530:CDS 35.0%
ATGGTAATTACTTGGAAGTC+TGG + chr3_3:84527197-84527216 None:intergenic 35.0%
! TCTAGCTCATGGTAATTACT+TGG + chr3_3:84527205-84527224 None:intergenic 35.0%
AACCCTTGGATCAATCATTA+TGG - chr3_3:84527591-84527610 Msa0479530:intron 35.0%
CACCATAATGATTGATCCAA+GGG + chr3_3:84527596-84527615 None:intergenic 35.0%
AGACAGAGATGTAAGGATAA+GGG + chr3_3:84527654-84527673 None:intergenic 35.0%
TTTACGAATTCGATTAAGCC+TGG - chr3_3:84527721-84527740 Msa0479530:intron 35.0%
TTGTTCTCAGTTGAAGAGTT+AGG - chr3_3:84528780-84528799 Msa0479530:intron 35.0%
! AGAGCTTTTACCAGCTTATT+TGG - chr3_3:84528809-84528828 Msa0479530:intron 35.0%
AGATTTGGATCCAAATAAGC+TGG + chr3_3:84528822-84528841 None:intergenic 35.0%
! AGATCACTTGGTTTGAGATT+TGG + chr3_3:84528837-84528856 None:intergenic 35.0%
TCCTTTAACGCCTAAAATAG+TGG - chr3_3:84528899-84528918 Msa0479530:intron 35.0%
!! ACCACTATTTTAGGCGTTAA+AGG + chr3_3:84528903-84528922 None:intergenic 35.0%
TAACGCCTAAAATAGTGGTA+TGG - chr3_3:84528904-84528923 Msa0479530:intron 35.0%
AAATCAGTCGGTGATTTCAT+TGG - chr3_3:84529018-84529037 Msa0479530:intron 35.0%
GAATACATAGGGAAGCTTAA+AGG - chr3_3:84529064-84529083 Msa0479530:intron 35.0%
! AGGAGCCTCTGATTTTATTA+AGG - chr3_3:84529237-84529256 Msa0479530:intron 35.0%
TGCTTCATTGTACTTCTCAT+TGG + chr3_3:84529365-84529384 None:intergenic 35.0%
ATTCAACTCAAAACTCTCCA+AGG - chr3_3:84529393-84529412 Msa0479530:intron 35.0%
ATTCTCAAGCCCCAAAAATA+TGG - chr3_3:84529493-84529512 Msa0479530:intron 35.0%
GGATATAAAGTTGCGGATAA+AGG - chr3_3:84529597-84529616 Msa0479530:intron 35.0%
TTCTGAATTATCAGGACAAG+TGG + chr3_3:84529676-84529695 None:intergenic 35.0%
TTTCTGTATACACTTTCGGT+TGG + chr3_3:84529723-84529742 None:intergenic 35.0%
AAGTGTATACAGAAAGCTTG+TGG - chr3_3:84529728-84529747 Msa0479530:CDS 35.0%
!! GTGGCTTTATTGAGTATGTT+TGG - chr3_3:84529893-84529912 Msa0479530:CDS 35.0%
!!! TGGCCATGTTTTGTTTTTAG+AGG - chr3_3:84529932-84529951 Msa0479530:CDS 35.0%
!! ACGTGCTAGCTATAGTTTTG+TGG - chr3_3:84525948-84525967 Msa0479530:three_prime_UTR 40.0%
CATATAGAGAGAGTTCAGCA+AGG + chr3_3:84526022-84526041 None:intergenic 40.0%
CTTGCTGAACTCTCTCTATA+TGG - chr3_3:84526020-84526039 Msa0479530:three_prime_UTR 40.0%
AGTGCAGGAACTGTAACATT+TGG + chr3_3:84526159-84526178 None:intergenic 40.0%
GGAGATTCTATCATGGATAC+AGG - chr3_3:84526189-84526208 Msa0479530:three_prime_UTR 40.0%
AAGTGCAATTTCCCTCCTTA+TGG - chr3_3:84526240-84526259 Msa0479530:CDS 40.0%
CCCTCAAAATCTTGACCATA+AGG + chr3_3:84526258-84526277 None:intergenic 40.0%
!! TATGGTCAAGATTTTGAGGG+AGG - chr3_3:84526258-84526277 Msa0479530:CDS 40.0%
!! ATGGTCAAGATTTTGAGGGA+GGG - chr3_3:84526259-84526278 Msa0479530:CDS 40.0%
ATATGGCTGTGAGGAATTCA+TGG - chr3_3:84526602-84526621 Msa0479530:CDS 40.0%
GGCCTATGAGATGACATATA+TGG - chr3_3:84526629-84526648 Msa0479530:CDS 40.0%
GGCCATATATGTCATCTCAT+AGG + chr3_3:84526634-84526653 None:intergenic 40.0%
!!! TTTCAAGGTTTTGGCTTTGG+GGG + chr3_3:84526655-84526674 None:intergenic 40.0%
ATACGTCAATGGATAGAGCA+AGG - chr3_3:84527146-84527165 Msa0479530:CDS 40.0%
! ACATACTCATGTCTAGCTCA+TGG + chr3_3:84527216-84527235 None:intergenic 40.0%
GAGGGTTAAATTACAACCCT+TGG - chr3_3:84527577-84527596 Msa0479530:intron 40.0%
CCACCATAATGATTGATCCA+AGG + chr3_3:84527597-84527616 None:intergenic 40.0%
CCTTGGATCAATCATTATGG+TGG - chr3_3:84527594-84527613 Msa0479530:intron 40.0%
GAGACAGAGATGTAAGGATA+AGG + chr3_3:84527655-84527674 None:intergenic 40.0%
! ATTGGACTTGATAATCTGCC+TGG - chr3_3:84527892-84527911 Msa0479530:intron 40.0%
GAAAGAAGGATTGAAGCTTG+TGG - chr3_3:84528005-84528024 Msa0479530:intron 40.0%
GAGAGAAAGAAAGATGCTAG+TGG - chr3_3:84528087-84528106 Msa0479530:intron 40.0%
ATTGAATAGTTGGGTAGGAC+TGG - chr3_3:84528122-84528141 Msa0479530:intron 40.0%
TTGAATAGTTGGGTAGGACT+GGG - chr3_3:84528123-84528142 Msa0479530:intron 40.0%
AAACCAAGTGATCTTCCTAC+TGG - chr3_3:84528843-84528862 Msa0479530:intron 40.0%
!! TAAGGAAAAGAGCATTGGCT+AGG + chr3_3:84529120-84529139 None:intergenic 40.0%
! GCTCTTTTCCTTATAGTAGC+TGG - chr3_3:84529127-84529146 Msa0479530:intron 40.0%
CATCACTTCCAGCTACTATA+AGG + chr3_3:84529138-84529157 None:intergenic 40.0%
AACATCGTAGTGTAGTTGTC+TGG + chr3_3:84529191-84529210 None:intergenic 40.0%
TATGCTGACCTAATGGTCAA+AGG - chr3_3:84529217-84529236 Msa0479530:intron 40.0%
TGTTTAGTGCAGCACCTATT+GGG - chr3_3:84529293-84529312 Msa0479530:intron 40.0%
TGTGATGGTAAGTACCCAAT+AGG + chr3_3:84529310-84529329 None:intergenic 40.0%
TTACCATCACAGAAGACTCT+GGG - chr3_3:84529319-84529338 Msa0479530:intron 40.0%
! ACTCTAACTTGCCCAATAGT+AGG - chr3_3:84529431-84529450 Msa0479530:intron 40.0%
! CTCTAACTTGCCCAATAGTA+GGG - chr3_3:84529432-84529451 Msa0479530:intron 40.0%
GATAAAGGTTGTTGTGGTAC+AGG - chr3_3:84529612-84529631 Msa0479530:intron 40.0%
! GTCAATCGTCCCACATATTT+TGG + chr3_3:84529765-84529784 None:intergenic 40.0%
!! TGGTTTTTGTTTCACCACAG+TGG - chr3_3:84529874-84529893 Msa0479530:CDS 40.0%
CATACTCAATAAAGCCACTG+TGG + chr3_3:84529891-84529910 None:intergenic 40.0%
TTGGAGTGTGAAACTGCATA+TGG - chr3_3:84529912-84529931 Msa0479530:CDS 40.0%
AGGGGTTGAACTTACTACAA+GGG - chr3_3:84529985-84530004 Msa0479530:five_prime_UTR 40.0%
GCAGGAACTGTAACATTTGG+TGG + chr3_3:84526156-84526175 None:intergenic 45.0%
! GTTCCTGCACTCATAGCTTT+TGG - chr3_3:84526168-84526187 Msa0479530:three_prime_UTR 45.0%
TCTCCAAAAGCTATGAGTGC+AGG + chr3_3:84526174-84526193 None:intergenic 45.0%
!! CCAACAGGTCGATTTTGCAA+CGG - chr3_3:84526285-84526304 Msa0479530:CDS 45.0%
GTCATTGTCATATGGCTGTG+AGG - chr3_3:84526593-84526612 Msa0479530:CDS 45.0%
CTGTGAGGAATTCATGGAGA+GGG - chr3_3:84526608-84526627 Msa0479530:CDS 45.0%
! AAAGATCAGGAAGGTGTGTG+TGG - chr3_3:84526891-84526910 Msa0479530:CDS 45.0%
GTGAGCTTCACCTTCTAATG+AGG + chr3_3:84527053-84527072 None:intergenic 45.0%
CTAGACATGAGTATGTGTCC+AGG - chr3_3:84527220-84527239 Msa0479530:intron 45.0%
GAAGAAAGAAGAAGCGGTGT+AGG - chr3_3:84528158-84528177 Msa0479530:intron 45.0%
ACTCCAGTAGGAAGATCACT+TGG + chr3_3:84528849-84528868 None:intergenic 45.0%
GAAGCAAAGCATACTCCAGT+AGG + chr3_3:84528861-84528880 None:intergenic 45.0%
ACTGGAGTATGCTTTGCTTC+TGG - chr3_3:84528861-84528880 Msa0479530:intron 45.0%
CATAGGGAAGCTTAAAGGTG+TGG - chr3_3:84529069-84529088 Msa0479530:intron 45.0%
AAGGTGTGGTTGGAGAGAAT+AGG - chr3_3:84529083-84529102 Msa0479530:intron 45.0%
AGGTGTGGTTGGAGAGAATA+GGG - chr3_3:84529084-84529103 Msa0479530:intron 45.0%
TCCTGCTTATGCTGACCTAA+TGG - chr3_3:84529210-84529229 Msa0479530:intron 45.0%
ACCATTAGGTCAGCATAAGC+AGG + chr3_3:84529214-84529233 None:intergenic 45.0%
GTGTTTAGTGCAGCACCTAT+TGG - chr3_3:84529292-84529311 Msa0479530:intron 45.0%
CTTACCATCACAGAAGACTC+TGG - chr3_3:84529318-84529337 Msa0479530:intron 45.0%
CTCAAAACTCTCCAAGGAGT+TGG - chr3_3:84529399-84529418 Msa0479530:intron 45.0%
GTGAAGACAATCCAACTCCT+TGG + chr3_3:84529413-84529432 None:intergenic 45.0%
GTTGCGGATAAAGGTTGTTG+TGG - chr3_3:84529606-84529625 Msa0479530:intron 45.0%
TTGTGGTACAGGAAAGCTAG+AGG - chr3_3:84529623-84529642 Msa0479530:intron 45.0%
GAGGGGTTGAACTTACTACA+AGG - chr3_3:84529984-84530003 Msa0479530:five_prime_UTR 45.0%
TTTGAGGGAGGGATTCCAAC+AGG - chr3_3:84526270-84526289 Msa0479530:CDS 50.0%
CCGTTGCAAAATCGACCTGT+TGG + chr3_3:84526288-84526307 None:intergenic 50.0%
GCTGTGAGGAATTCATGGAG+AGG - chr3_3:84526607-84526626 Msa0479530:CDS 50.0%
GACGACGAGACAGAGATGTA+AGG + chr3_3:84527661-84527680 None:intergenic 50.0%
AAGAAGAAGCGGTGTAGGAG+AGG - chr3_3:84528163-84528182 Msa0479530:intron 50.0%
AGAAGAAGCGGTGTAGGAGA+GGG - chr3_3:84528164-84528183 Msa0479530:intron 50.0%
GTGTAGGAGAGGGAAGATGA+AGG - chr3_3:84528174-84528193 Msa0479530:intron 50.0%
TGCTTTGCTTCTGGTGCATC+TGG - chr3_3:84528870-84528889 Msa0479530:intron 50.0%
! GGGAAGCTTAAAGGTGTGGT+TGG - chr3_3:84529073-84529092 Msa0479530:intron 50.0%
CAGAGGCTCCTTTGACCATT+AGG + chr3_3:84529228-84529247 None:intergenic 50.0%
CAACTTGGAGCACGCAGAAT+TGG - chr3_3:84529268-84529287 Msa0479530:intron 50.0%
CATCACAGAAGACTCTGGGT+GGG - chr3_3:84529323-84529342 Msa0479530:intron 50.0%
ATCACAGAAGACTCTGGGTG+GGG - chr3_3:84529324-84529343 Msa0479530:intron 50.0%
CAGGACAAGTGGCACTCAAA+GGG + chr3_3:84529665-84529684 None:intergenic 50.0%
TCAGGACAAGTGGCACTCAA+AGG + chr3_3:84529666-84529685 None:intergenic 50.0%
CCACCCAGAGTCTTCTGTGA+TGG + chr3_3:84529325-84529344 None:intergenic 55.0%
CCATCACAGAAGACTCTGGG+TGG - chr3_3:84529322-84529341 Msa0479530:intron 55.0%
TCACAGAAGACTCTGGGTGG+GGG - chr3_3:84529325-84529344 Msa0479530:intron 55.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 84525944 84530075 84525944 ID=Msa0479530;Name=Msa0479530
chr3_3 mRNA 84525944 84530075 84525944 ID=Msa0479530-mRNA-1;Parent=Msa0479530;Name=Msa0479530-mRNA-1;_AED=0.03;_eAED=0.03;_QI=95|1|1|1|1|1|4|284|368
chr3_3 exon 84525944 84526421 84525944 ID=Msa0479530-mRNA-1:exon:24021;Parent=Msa0479530-mRNA-1
chr3_3 exon 84526505 84526994 84526505 ID=Msa0479530-mRNA-1:exon:24020;Parent=Msa0479530-mRNA-1
chr3_3 exon 84527099 84527229 84527099 ID=Msa0479530-mRNA-1:exon:24019;Parent=Msa0479530-mRNA-1
chr3_3 exon 84529689 84530075 84529689 ID=Msa0479530-mRNA-1:exon:24018;Parent=Msa0479530-mRNA-1
chr3_3 five_prime_UTR 84529981 84530075 84529981 ID=Msa0479530-mRNA-1:five_prime_utr;Parent=Msa0479530-mRNA-1
chr3_3 CDS 84529689 84529980 84529689 ID=Msa0479530-mRNA-1:cds;Parent=Msa0479530-mRNA-1
chr3_3 CDS 84527099 84527229 84527099 ID=Msa0479530-mRNA-1:cds;Parent=Msa0479530-mRNA-1
chr3_3 CDS 84526505 84526994 84526505 ID=Msa0479530-mRNA-1:cds;Parent=Msa0479530-mRNA-1
chr3_3 CDS 84526228 84526421 84526228 ID=Msa0479530-mRNA-1:cds;Parent=Msa0479530-mRNA-1
chr3_3 three_prime_UTR 84525944 84526227 84525944 ID=Msa0479530-mRNA-1:three_prime_utr;Parent=Msa0479530-mRNA-1
Gene Sequence

>Msa0479530

ATGGCTGTGTTTATGATGAAGCTGCCTAGCACTTATTCACCAAATAGCTTAACATTATTACGTTTCATGTTGTTGTTAGTTTTATCGTATAGAACGAATGCATTGGTTAAACTACCACCAAATGTTACAGTTCCTGCACTCATAGCTTTTGGAGATTCTATCATGGATACAGGAAATAACAATAACATCAAAACAATCGTCAAGTGCAATTTCCCTCCTTATGGTCAAGATTTTGAGGGAGGGATTCCAACAGGTCGATTTTGCAACGGAAAAAATCCATCAGACTTGATAGTTGAAGAGTTAGGTATTAAAGAGCTTTTACCAGCTTATTTGGATCCAAATCTCAAACCAAGTGATCTTCCTACTGGAGTATGCTTTGCTTCTGGTGCATCTGGATATGATCCTTTAACGCCTAAAATAGTGTCGGTGATTTCATTGGCCGATCAACTAAAGATGTTCAAAGAATACATAGGGAAGCTTAAAGGTGTGGTTGGAGAGAATAGGGCAAACTTCATCCTAGCCAATGCTCTTTTCCTTATAGTAGCTGGAAGTGATGACCTTGCCAACACTTATTTTACTATTCGCACCAGACAACTACACTACGATGTTCCTGCTTATGCTGACCTAATGGTCAAAGGAGCCTCTGATTTTATTAAGGAAATATATCAACTTGGAGCACGCAGAATTGGAGTGTTTAGTGCAGCACCTATTGGGTACTTACCATCACAGAAGACTCTGGGTGGGGGTGTATTTAGAAAGACCAATGAGAAGTACAATGAAGCAGCCAAGTTATTCAACTCAAAACTCTCCAAGGAGTTGGATTGTCTTCACTCTAACTTGCCCAATAGTAGGGTCATTTATATTGATATTTACAGTCCCTTACTTGATATCATTCTCAAGCCCCAAAAATATGGATATAAAGTTGCGGATAAAGGTTGTTGTGGTACAGGAAAGCTAGAGGTTTCAGTGCTATGCAACCCTTTGAGTGCCACTTGTCCTGATAATTCAGAATACATATTTTGGGACAGTTATCATCCAACCGAAAGTGTATACAGAAAGCTTGTGGCTGTAGTTCTTCCAAAATATGTGGGACGATTGACTGCATGA
Protein sequence

>Msa0479530

MAVFMMKLPSTYSPNSLTLLRFMLLLVLSYRTNALVKLPPNVTVPALIAFGDSIMDTGNNNNIKTIVKCNFPPYGQDFEGGIPTGRFCNGKNPSDLIVEELGIKELLPAYLDPNLKPSDLPTGVCFASGASGYDPLTPKIVSVISLADQLKMFKEYIGKLKGVVGENRANFILANALFLIVAGSDDLANTYFTIRTRQLHYDVPAYADLMVKGASDFIKEIYQLGARRIGVFSAAPIGYLPSQKTLGGGVFRKTNEKYNEAAKLFNSKLSKELDCLHSNLPNSRVIYIDIYSPLLDIILKPQKYGYKVADKGCCGTGKLEVSVLCNPLSATCPDNSEYIFWDSYHPTESVYRKLVAVVLPKYVGRLTA*