AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0481130

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0481130 MtrunA17_Chr4g0067521 98.617 723 10 0 1 723 1 723 0.0 1454
Msa0481130 MtrunA17_Chr2g0295671 82.058 719 129 0 5 723 3 721 0.0 1217
Msa0481130 MtrunA17_Chr6g0485841 58.748 703 288 1 12 714 10 710 0.0 843
Msa0481130 MtrunA17_Chr8g0360311 31.560 282 186 5 310 587 4 282 8.70e-33 128
Msa0481130 MtrunA17_Chr4g0055741 35.714 196 117 5 12 202 48 239 9.81e-25 105
Msa0481130 MtrunA17_Chr4g0068451 30.244 205 126 4 1 199 1 194 3.15e-20 91.3
Msa0481130 MtrunA17_Chr3g0122861 29.341 167 111 2 23 182 24 190 3.66e-17 82.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0481130 AT3G06860.1 76.552 725 168 2 1 723 1 725 0.0 1146
Msa0481130 AT4G29010.1 56.033 721 316 1 3 723 2 721 0.0 823
Msa0481130 AT3G15290.1 29.210 291 198 4 310 594 4 292 4.56e-33 129
Msa0481130 AT3G15290.2 28.936 235 159 4 366 594 1 233 6.30e-25 104
Msa0481130 AT4G16800.1 33.673 196 125 3 13 205 50 243 4.71e-24 103
Msa0481130 AT5G43280.2 29.897 194 124 2 1 182 3 196 4.15e-20 90.1
Msa0481130 AT5G43280.1 29.897 194 124 2 1 182 3 196 1.69e-19 89.7
Msa0481130 AT4G16210.1 27.861 201 129 3 16 210 18 208 5.30e-18 85.1

Find 237 sgRNAs with CRISPR-Local

Find 578 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCCATGGGCATTCCAAATT+TGG 0.114974 3_3:-86892206 None:intergenic
CAACTATATTCTTAGGATTT+TGG 0.126989 3_3:-86894395 None:intergenic
AGCATTCCTATTTGTATTTA+AGG 0.128020 3_3:-86894943 None:intergenic
GAATGCCCATGGGGCCTTTA+AGG 0.140153 3_3:+86892215 Msa0481130:CDS
CAACTCAATACTTCCATTAT+TGG 0.171090 3_3:-86894560 None:intergenic
TCAATAAATTTCTTTAATTC+AGG 0.174035 3_3:-86892626 None:intergenic
CCAGGGGAGGTATCATATTC+TGG 0.190853 3_3:+86893037 Msa0481130:intron
GATAAAGCAGTAACCAAATT+TGG 0.192717 3_3:+86892193 Msa0481130:CDS
TGGTTACTGCTTTATCAATT+TGG 0.207310 3_3:-86892186 None:intergenic
GCCAGTATTGCGAAGTTTAA+AGG 0.207390 3_3:+86887953 Msa0481130:intron
CATTTAATTCACAGGTTTAA+TGG 0.225711 3_3:-86894906 None:intergenic
AAGAGAGTTGCTTGTGTATA+TGG 0.227919 3_3:-86892136 None:intergenic
GTACAGGATTTGCTGTTAAT+AGG 0.230122 3_3:+86892104 Msa0481130:CDS
GAGTTGTTGGTTTAAATAAA+TGG 0.231120 3_3:+86894577 Msa0481130:three_prime_UTR
ATCGATATCCACCCAGGTTT+TGG 0.234196 3_3:-86888431 None:intergenic
TCCAGGCATTAATACCTTAA+AGG 0.237602 3_3:-86892229 None:intergenic
CCAGTGGGCCCTGGATATTT+TGG 0.256172 3_3:+86889876 Msa0481130:CDS
TCTTGGCTTGAACAGGTGCC+TGG 0.259592 3_3:+86891195 Msa0481130:intron
CAAGTTTCAACTATATTCTT+AGG 0.271833 3_3:-86894402 None:intergenic
GAGAAAGCTAGGAGCATTTC+CGG 0.273477 3_3:+86892647 Msa0481130:CDS
CCCTCAGTTGCTGCCATTGA+TGG 0.284270 3_3:+86888571 Msa0481130:CDS
GCAACCTTCTTCACGGATCT+TGG 0.292427 3_3:-86891240 None:intergenic
TAAGAGCCTTAAATACAAAT+AGG 0.292492 3_3:+86894937 Msa0481130:three_prime_UTR
GTCAATTCTCTCTCCTTTGA+TGG 0.298949 3_3:+86886816 Msa0481130:CDS
CTTGGGATAATTCCTGGATT+TGG 0.300048 3_3:+86888764 Msa0481130:CDS
CAGGAAAGTTCTGAACAAAT+TGG 0.300099 3_3:-86892361 None:intergenic
TGATGGCCTTGCCTTGGGTG+GGG 0.300495 3_3:+86888588 Msa0481130:CDS
AAGTCTCAAGATCGAATTAT+TGG 0.302329 3_3:+86891869 Msa0481130:CDS
CTTCAGCTTGGGATAATTCC+TGG 0.319048 3_3:+86888758 Msa0481130:CDS
CTTCAAGCCTTGTGCCTACT+TGG 0.319905 3_3:+86893128 Msa0481130:CDS
GAGATTCAAGTTTGATTTGA+AGG 0.320170 3_3:-86886631 None:intergenic
GCCATTGATGGCCTTGCCTT+GGG 0.322408 3_3:+86888583 Msa0481130:CDS
CATCCTTGGTGGAGGACTAA+TGG 0.322786 3_3:+86891263 Msa0481130:CDS
GGTCGAAATAGAAGTACTTT+AGG 0.324409 3_3:+86894480 Msa0481130:three_prime_UTR
TGCACATGTTATGCCACTTC+TGG 0.325842 3_3:+86891985 Msa0481130:CDS
TTGATGGCCTTGCCTTGGGT+GGG 0.326894 3_3:+86888587 Msa0481130:CDS
GTCAAGGCAATTGTTGTTAC+AGG 0.328151 3_3:+86888008 Msa0481130:CDS
ATTGACATTGCCATTATTAG+TGG 0.328275 3_3:-86894687 None:intergenic
GATGGCCTTGCCTTGGGTGG+GGG 0.328948 3_3:+86888589 Msa0481130:CDS
TGCCATTGATGGCCTTGCCT+TGG 0.329610 3_3:+86888582 Msa0481130:CDS
CAACCTGTTGAAGAATAATA+TGG 0.330541 3_3:+86894985 Msa0481130:three_prime_UTR
CAGGATACCACCTGAAGAAA+TGG 0.332736 3_3:-86891895 None:intergenic
GCTGGTATCAATAGGATTAA+AGG 0.333729 3_3:+86891363 Msa0481130:CDS
CTGGTCCCCGTGCTGGTCTC+TGG 0.336045 3_3:+86890064 Msa0481130:CDS
TTTAGTTCGGGGCTTGTAGA+TGG 0.341760 3_3:+86889817 Msa0481130:CDS
TGCTCAAAGAGGAACATCTA+AGG 0.347542 3_3:+86890237 Msa0481130:CDS
ATGTTTCCTCATAAGTTTAC+CGG 0.349164 3_3:+86894650 Msa0481130:three_prime_UTR
TTCGGTGTGGCGGTTGCAAC+CGG 0.356103 3_3:+86892335 Msa0481130:CDS
CAGGAATTGAGTTAATAATT+AGG 0.356419 3_3:+86894736 Msa0481130:three_prime_UTR
TTATTGGAGCCCATTTCTTC+AGG 0.358184 3_3:+86891885 Msa0481130:CDS
TACAGGATTTGCTGTTAATA+GGG 0.362316 3_3:+86892105 Msa0481130:CDS
TCAACAGGTTGTACCTTGTA+AGG 0.366847 3_3:-86894973 None:intergenic
GGTCCATATTATTCTTCAAC+AGG 0.366887 3_3:-86894988 None:intergenic
ATCAAAATGAGTAGCAGAAA+AGG 0.369109 3_3:+86886732 Msa0481130:exon
TACTTTAGGATCAGCTATAC+AGG 0.369281 3_3:+86894494 Msa0481130:three_prime_UTR
TCTTGGATGCTGGTATCAAT+AGG 0.369714 3_3:+86891355 Msa0481130:CDS
CTTGGCTTGAACAGGTGCCT+GGG 0.374210 3_3:+86891196 Msa0481130:intron
TTGTGTGACCTTGTTGGTTT+CGG 0.374734 3_3:+86892317 Msa0481130:CDS
ATCCTTGGTGGAGGACTAAT+GGG 0.378446 3_3:+86891264 Msa0481130:CDS
CAAGTAGCAAGATGAGTTGC+AGG 0.384240 3_3:+86894717 Msa0481130:three_prime_UTR
TTCGGGGCTTGTAGATGGTT+TGG 0.385848 3_3:+86889822 Msa0481130:CDS
TATATTCAAGATTGGAGAAA+TGG 0.387378 3_3:+86893085 Msa0481130:CDS
CTTCTTTCCTGTGGTGAATG+AGG 0.388658 3_3:+86892854 Msa0481130:CDS
AATTCACAGGTTTAATGGTT+AGG 0.391141 3_3:-86894901 None:intergenic
CATACAGAGCGTCCAAAACC+TGG 0.393139 3_3:+86888419 Msa0481130:intron
ATTGATGGCCTTGCCTTGGG+TGG 0.400708 3_3:+86888586 Msa0481130:CDS
TTGCTGCAGACCACTAATAA+TGG 0.402509 3_3:+86894677 Msa0481130:three_prime_UTR
TGCATTGATGTTATTGAAGC+AGG 0.402878 3_3:+86890033 Msa0481130:CDS
CAATAAATTTCTTTAATTCA+GGG 0.403494 3_3:-86892625 None:intergenic
ATCTACTGAAAACTGTTGTC+AGG 0.403510 3_3:+86895032 Msa0481130:three_prime_UTR
CAGCGACTTCCTCGTCTTGT+TGG 0.407284 3_3:+86889442 Msa0481130:CDS
TCTTGATATTGCTGCTATCA+TGG 0.409564 3_3:+86892920 Msa0481130:CDS
AACCAGAGGATGCTTGAGAT+TGG 0.409821 3_3:-86890010 None:intergenic
ATCCTTTCCTTTCACTGGCT+TGG 0.411160 3_3:-86889791 None:intergenic
TAATGGAAGTATTGAGTTGT+TGG 0.411758 3_3:+86894564 Msa0481130:three_prime_UTR
ATATTCTGGGCCGACTCTCT+TGG 0.418222 3_3:+86893051 Msa0481130:CDS
AATTTCTTTAATTCAGGGTC+AGG 0.419341 3_3:-86892620 None:intergenic
AGCAAAGATTTGTTGCTTCA+AGG 0.419478 3_3:-86891762 None:intergenic
TGCAGATTGTGTGACCTTGT+TGG 0.420097 3_3:+86892311 Msa0481130:intron
AACTGTTGTCAGGGTTGGAT+TGG 0.420982 3_3:+86895042 Msa0481130:three_prime_UTR
CACTGCACGCCAGTGGGCCC+TGG 0.421188 3_3:+86889867 Msa0481130:CDS
TTTGATATTTCTGCATTTGG+TGG 0.438194 3_3:+86888303 Msa0481130:CDS
ATTATCCCAAGCTGAAGTTC+AGG 0.438901 3_3:-86888752 None:intergenic
CAGGGGAGGTATCATATTCT+GGG 0.442930 3_3:+86893038 Msa0481130:intron
GTGAAGAAGGTTGCCATCCT+TGG 0.448024 3_3:+86891249 Msa0481130:CDS
CGGTGTCTCCGTTGATCCAA+TGG 0.449423 3_3:+86892667 Msa0481130:CDS
AGAAATTTATTGAGAAAGCT+AGG 0.449622 3_3:+86892636 Msa0481130:CDS
ACTGTTGTCAGGGTTGGATT+GGG 0.450837 3_3:+86895043 Msa0481130:three_prime_UTR
CTCTTATCCTCTTGCAAAAG+AGG 0.451044 3_3:-86892410 None:intergenic
GGGATAATTCCTGGATTTGG+AGG 0.453229 3_3:+86888767 Msa0481130:CDS
CTGAAAACTGTTGTCAGGGT+TGG 0.455162 3_3:+86895037 Msa0481130:three_prime_UTR
GTTGTTACTAGCACCAATAA+TGG 0.456871 3_3:+86894547 Msa0481130:three_prime_UTR
ATCATCACTGATACAATAGA+AGG 0.457304 3_3:+86888458 Msa0481130:CDS
GTTTCTTCACTTACAGCCCT+TGG 0.458595 3_3:+86894516 Msa0481130:three_prime_UTR
TAAATACATATATTCAAGAT+TGG 0.463117 3_3:+86893077 Msa0481130:CDS
CTTTAATTCAGGGTCAGGAC+TGG 0.464144 3_3:-86892615 None:intergenic
AGGAAAGTTCTGAACAAATT+GGG 0.464229 3_3:-86892360 None:intergenic
ACCCAAGGCAAGGCCATCAA+TGG 0.465691 3_3:-86888584 None:intergenic
TGTCCACCTCATTGTATACT+TGG 0.468794 3_3:+86891800 Msa0481130:CDS
TGGGGTTACTGATCGTGGTC+TGG 0.468930 3_3:+86891215 Msa0481130:CDS
GTCTGCCTGAACTTCAGCTT+GGG 0.469540 3_3:+86888747 Msa0481130:CDS
AAAGCATCCTTTCCTTTCAC+TGG 0.469848 3_3:-86889796 None:intergenic
ACCAGAGGATGCTTGAGATT+GGG 0.474908 3_3:-86890009 None:intergenic
CCAAAATATCCAGGGCCCAC+TGG 0.476668 3_3:-86889876 None:intergenic
AGCTGAAGCATTTGATGCAC+TGG 0.477773 3_3:+86890174 Msa0481130:CDS
AGGATACCACCTGAAGAAAT+GGG 0.484323 3_3:-86891894 None:intergenic
GTCGACGGTCCAAAATATCC+AGG 0.487842 3_3:-86889885 None:intergenic
GCAGTGTTCATCAACTGATC+AGG 0.488840 3_3:-86889850 None:intergenic
GTTTAAATAAATGGTTATTG+TGG 0.489447 3_3:+86894586 Msa0481130:three_prime_UTR
CTTTCTTAACACGGCTCTGT+AGG 0.489868 3_3:-86891498 None:intergenic
AGAGAGTTGCTTGTGTATAT+GGG 0.492173 3_3:-86892135 None:intergenic
TCCCAATCTCAAGCATCCTC+TGG 0.493387 3_3:+86890008 Msa0481130:CDS
ATTCCTTTATTAGGTGCAAA+GGG 0.495576 3_3:+86888264 Msa0481130:intron
AATGCACCGGTAAACTTATG+AGG 0.495917 3_3:-86894656 None:intergenic
AGATGTAGACATGGTGATAG+AGG 0.497311 3_3:+86891594 Msa0481130:CDS
GAGAAATGGTCAGAGTTGTA+TGG 0.498721 3_3:+86893099 Msa0481130:CDS
GGGCACACGGTTATGAATGT+TGG 0.500677 3_3:+86886753 Msa0481130:CDS
GGTGGAGGACTAATGGGCTC+TGG 0.502096 3_3:+86891270 Msa0481130:CDS
TTGATAATAGTCACTGTGAA+TGG 0.507384 3_3:+86886584 None:intergenic
ATTGATTTATAAGTTCGCTC+AGG 0.508035 3_3:-86892380 None:intergenic
GCAAGCTAAGTCACGGATGT+AGG 0.509691 3_3:+86894315 Msa0481130:CDS
ATAGTGTCTGGTCCCCGTGC+TGG 0.510635 3_3:+86890057 Msa0481130:CDS
ACCAAATTTGGAATGCCCAT+GGG 0.511824 3_3:+86892205 Msa0481130:CDS
TATTCCTTTATTAGGTGCAA+AGG 0.511923 3_3:+86888263 Msa0481130:intron
GGTGGTCTTCAAGAGTCAAA+AGG 0.512428 3_3:+86888321 Msa0481130:CDS
CTTGATATTGCTGCTATCAT+GGG 0.512632 3_3:+86892921 Msa0481130:CDS
AAGGATGGCAACCTTCTTCA+CGG 0.512901 3_3:-86891247 None:intergenic
TCAAAATGAGTAGCAGAAAA+GGG 0.516058 3_3:+86886733 Msa0481130:exon
ACAGGCGAAACAACTCGAAA+AGG 0.516206 3_3:+86892563 Msa0481130:intron
TGAGATGATCTTCTTTCCTG+TGG 0.516475 3_3:+86892845 Msa0481130:CDS
ATCAAAGGAGAGAGAATTGA+CGG 0.516570 3_3:-86886814 None:intergenic
GAAAAGCAGTATACCATCAA+AGG 0.517513 3_3:-86886829 None:intergenic
AATGCTAGCCGTGCCTTACA+AGG 0.518534 3_3:+86894960 Msa0481130:three_prime_UTR
ATTTCCAGGACAAACCTGTA+AGG 0.519986 3_3:-86892957 None:intergenic
TTGACTGCAGCAGATTTGCT+TGG 0.520806 3_3:+86894459 Msa0481130:three_prime_UTR
AAGAAAACTCCGGTGGTGGT+TGG 0.522933 3_3:+86892076 Msa0481130:CDS
TATTGCTGCTATCATGGGAA+TGG 0.522999 3_3:+86892926 Msa0481130:CDS
TGAAAATACCATTGGATCAA+CGG 0.523204 3_3:-86892675 None:intergenic
CTACAGAGCCGTGTTAAGAA+AGG 0.523378 3_3:+86891499 Msa0481130:CDS
AGAAGTGGCATAACATGTGC+AGG 0.524021 3_3:-86891983 None:intergenic
ATTGCTGCTATCATGGGAAT+GGG 0.524426 3_3:+86892927 Msa0481130:CDS
AAGGCATTCTCTCTTGTCAA+AGG 0.524478 3_3:+86891547 Msa0481130:CDS
AATCTATTACCTCCAAATCC+AGG 0.524562 3_3:-86888776 None:intergenic
ATTGAAGCAGGAATAGTGTC+TGG 0.529436 3_3:+86890045 Msa0481130:CDS
TTGCAAGAGGATAAGAGGGC+TGG 0.529968 3_3:+86892416 Msa0481130:CDS
GTTATGAATGTTGGAGCTGA+TGG 0.530473 3_3:+86886762 Msa0481130:CDS
CGCAGCTCTTGCAGCCAAGT+AGG 0.533462 3_3:-86893142 None:intergenic
GCTTGTCGTGTCCTCGATGA+AGG 0.533592 3_3:+86892876 Msa0481130:CDS
TAACACTTCCACAATTGACT+TGG 0.534164 3_3:+86891826 Msa0481130:CDS
AACCTTCCAGAGACCAGCAC+GGG 0.535190 3_3:-86890070 None:intergenic
GTGGTGGTTGGAAACTGTAC+AGG 0.538004 3_3:+86892088 Msa0481130:CDS
GGTCTGCCTGAACTTCAGCT+TGG 0.538578 3_3:+86888746 Msa0481130:CDS
GCCATCAATGGCAGCAACTG+AGG 0.539511 3_3:-86888572 None:intergenic
GGTTCCAAGATCCGTGAAGA+AGG 0.539865 3_3:+86891236 Msa0481130:CDS
AAGAAGGTTGCCATCCTTGG+TGG 0.541758 3_3:+86891252 Msa0481130:CDS
CTCTGAAGCTATCATAGTCG+AGG 0.544657 3_3:-86891573 None:intergenic
AACCAAATTTGGAATGCCCA+TGG 0.549285 3_3:+86892204 Msa0481130:CDS
CATTAGTCCTCCACCAAGGA+TGG 0.549444 3_3:-86891262 None:intergenic
TCCCCGTGCTGGTCTCTGGA+AGG 0.555568 3_3:+86890068 Msa0481130:CDS
ACAATTGACTTGGACCTGAT+CGG 0.556105 3_3:+86891836 Msa0481130:CDS
GATAAAGAAAACTCCGGTGG+TGG 0.556279 3_3:+86892072 Msa0481130:CDS
AGCTGCGAAAGGAATTCCTC+TGG 0.556542 3_3:+86893158 Msa0481130:CDS
TTGGCTTGAACAGGTGCCTG+GGG 0.557600 3_3:+86891197 Msa0481130:intron
AGGATTGATGATGGTGATGA+TGG 0.561716 3_3:-86886790 None:intergenic
GTTCTGAACAAATTGGGAGC+CGG 0.563555 3_3:-86892354 None:intergenic
AAGACTTCCAAGCCAGTGAA+AGG 0.570066 3_3:+86889784 Msa0481130:intron
TCGTCTTGTTGGTCTGACAA+AGG 0.571030 3_3:+86889453 Msa0481130:CDS
CCTTGTTGGTTTCGGTGTGG+CGG 0.571755 3_3:+86892325 Msa0481130:CDS
TTTATTGCAGGGAGCCTCAG+TGG 0.571990 3_3:+86894291 Msa0481130:intron
TACTTGAGGAGATGTCCGCT+TGG 0.574891 3_3:-86892020 None:intergenic
GATCAGGTCCAAGTCAATTG+TGG 0.576055 3_3:-86891834 None:intergenic
ACTCTCTTGCTTGTTGAACG+TGG 0.576557 3_3:+86892151 Msa0481130:CDS
TCAACTGCAACTGCTCAACT+AGG 0.578099 3_3:+86888725 Msa0481130:CDS
TGTGGCGGGTGAAGCTATGA+TGG 0.578671 3_3:-86895009 None:intergenic
ATTTCAATCGATATCCACCC+AGG 0.580987 3_3:-86888437 None:intergenic
CCATCAATGGCAGCAACTGA+GGG 0.581078 3_3:-86888571 None:intergenic
AAGGTTGCCATCCTTGGTGG+AGG 0.582648 3_3:+86891255 Msa0481130:CDS
AGTGGTCTGCAGCAATGCAC+CGG 0.586024 3_3:-86894669 None:intergenic
CATTGGATCAACGGAGACAC+CGG 0.588849 3_3:-86892666 None:intergenic
TTAAATTACCTTTCTTAACA+CGG 0.589372 3_3:-86891507 None:intergenic
TGATGAACACTGCACGCCAG+TGG 0.592343 3_3:+86889860 Msa0481130:CDS
ATCTCTCTAGCTTCCCCAAG+TGG 0.593202 3_3:-86889949 None:intergenic
GCTTGTCAAGTTACAAGAGA+AGG 0.593813 3_3:+86892815 Msa0481130:intron
TCTACTGAAAACTGTTGTCA+GGG 0.597120 3_3:+86895033 Msa0481130:three_prime_UTR
TAATACCTTAAAGGCCCCAT+GGG 0.597524 3_3:-86892220 None:intergenic
TTGAAAAGACTGGTAATCCA+TGG 0.601713 3_3:-86889910 None:intergenic
AATAATTCGATCTTGAGACT+TGG 0.602818 3_3:-86891867 None:intergenic
TCTTATCCTCTTGCAAAAGA+GGG 0.604628 3_3:-86892409 None:intergenic
TCAAAGGAGAGAGAATTGAC+GGG 0.604779 3_3:-86886813 None:intergenic
CTTGCAGCCAAGTAGGCACA+AGG 0.605837 3_3:-86893135 None:intergenic
GATGAACACTGCACGCCAGT+GGG 0.609849 3_3:+86889861 Msa0481130:CDS
AGTAACAACAAACACAGCCA+AGG 0.612056 3_3:-86894533 None:intergenic
AAAGAAGATAAAGAAAACTC+CGG 0.612409 3_3:+86892066 Msa0481130:CDS
TCTGAAGCTATCATAGTCGA+GGG 0.612594 3_3:-86891572 None:intergenic
CCAAATTTGGAATGCCCATG+GGG 0.613323 3_3:+86892206 Msa0481130:CDS
TTTGTATGATGATAGACGCA+AGG 0.613356 3_3:+86892592 Msa0481130:CDS
GTACGTACAATCTCCAGAAG+TGG 0.615404 3_3:-86891998 None:intergenic
CGACAAGCCTCATTCACCAC+AGG 0.617770 3_3:-86892861 None:intergenic
ATTGACGGGAGGATTGATGA+TGG 0.618728 3_3:-86886799 None:intergenic
AACAAGTCAACTATTACTTG+AGG 0.620177 3_3:-86892034 None:intergenic
TTAATACCTTAAAGGCCCCA+TGG 0.622172 3_3:-86892221 None:intergenic
TAGGCACAAGGCTTGAAGAA+CGG 0.623447 3_3:-86893123 None:intergenic
CAGTGGAGCAAGCTAAGTCA+CGG 0.624744 3_3:+86894308 Msa0481130:CDS
GTACAGTTTCCAACCACCAC+CGG 0.625203 3_3:-86892085 None:intergenic
CCGCCACACCGAAACCAACA+AGG 0.625859 3_3:-86892325 None:intergenic
AAAGGCACTTGAAATGATGT+TGG 0.628694 3_3:+86889471 Msa0481130:CDS
TAAGAAAGGTAATTTAACCC+AGG 0.632176 3_3:+86891513 Msa0481130:CDS
TTGGCTGCAAGAGCTGCGAA+AGG 0.633349 3_3:+86893147 Msa0481130:CDS
GTATTTAGATCCAAGAGAGT+CGG 0.634201 3_3:-86893061 None:intergenic
GTGCCTGGGGTTACTGATCG+TGG 0.635864 3_3:+86891210 Msa0481130:CDS
TGGTAATCCATGGTCGTCGA+CGG 0.637899 3_3:-86889900 None:intergenic
TCCAGGACAAACCTGTAAGG+TGG 0.639879 3_3:-86892954 None:intergenic
AGACCACGATCAGTAACCCC+AGG 0.641999 3_3:-86891213 None:intergenic
AAGAGAACAAGTGTCGTGAA+CGG 0.642385 3_3:-86886608 None:intergenic
TAAATGGTTATTGTGGTACG+TGG 0.644466 3_3:+86894593 Msa0481130:three_prime_UTR
GTAACAACAAACACAGCCAA+GGG 0.646340 3_3:-86894532 None:intergenic
TTCCAAGCCAGTGAAAGGAA+AGG 0.647016 3_3:+86889789 Msa0481130:CDS
ATACAGAGCGTCCAAAACCT+GGG 0.647591 3_3:+86888420 Msa0481130:intron
AGGTTGTACCTTGTAAGGCA+CGG 0.658448 3_3:-86894968 None:intergenic
TAACCTTCCAGAGACCAGCA+CGG 0.660468 3_3:-86890071 None:intergenic
GAGTAGCAGAAAAGGGCACA+CGG 0.662667 3_3:+86886740 Msa0481130:CDS
TGACCTTGTTGGTTTCGGTG+TGG 0.664854 3_3:+86892322 Msa0481130:CDS
CTACCAAGTATACAATGAGG+TGG 0.665779 3_3:-86891803 None:intergenic
TCGACGGTCCAAAATATCCA+GGG 0.666513 3_3:-86889884 None:intergenic
GAAGATAAAGAAAACTCCGG+TGG 0.683130 3_3:+86892069 Msa0481130:CDS
TAGCTTCAGAGATGTAGACA+TGG 0.688113 3_3:+86891585 Msa0481130:CDS
TTTGTCAGACCAACAAGACG+AGG 0.689247 3_3:-86889451 None:intergenic
ATAACATCAATGCAAACCAG+AGG 0.690147 3_3:-86890024 None:intergenic
AAGGAGAGAGAATTGACGGG+AGG 0.693660 3_3:-86886810 None:intergenic
CAGAGCGTCCAAAACCTGGG+TGG 0.694788 3_3:+86888423 Msa0481130:intron
TATACAAAGAGATGACGTCA+AGG 0.695762 3_3:+86887992 Msa0481130:CDS
TGACTTAGCTTGCTCCACTG+AGG 0.699217 3_3:-86894305 None:intergenic
AGCCCATTAGTCCTCCACCA+AGG 0.699918 3_3:-86891266 None:intergenic
TGGAGATTGTACGTACCAAG+CGG 0.712074 3_3:+86892005 Msa0481130:CDS
ACCTTCCAGAGACCAGCACG+GGG 0.718540 3_3:-86890069 None:intergenic
TGACTACAATACCTTCATCG+AGG 0.734339 3_3:-86892887 None:intergenic
TTACTACCAAGTATACAATG+AGG 0.759176 3_3:-86891806 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTGATATTCAAATTTTAT+AGG + chr3_3:86889193-86889212 Msa0481130:intron 10.0%
!! AAAAATTAATTGAAAATTGT+TGG - chr3_3:86889743-86889762 None:intergenic 10.0%
!!! ACTTATTAGTTTATAATTAA+TGG + chr3_3:86890938-86890957 Msa0481130:intron 10.0%
!!! ACATTTAAAGTAAATTTTAA+CGG + chr3_3:86892750-86892769 Msa0481130:intron 10.0%
!!! TATAGTATTGATTAAAATAA+AGG + chr3_3:86893474-86893493 Msa0481130:intron 10.0%
!! ATTAATTTAAATAAAGGAAA+TGG - chr3_3:86893506-86893525 None:intergenic 10.0%
!! AGAATCATTAATTTAAATAA+AGG - chr3_3:86893512-86893531 None:intergenic 10.0%
!! AAAAGGTTCAAAAAATTAAA+AGG + chr3_3:86887119-86887138 Msa0481130:intron 15.0%
!! ATTCTATTATTTAATGAATG+AGG + chr3_3:86887590-86887609 Msa0481130:intron 15.0%
!! TTTATATCCAAATATAATCA+CGG + chr3_3:86887666-86887685 Msa0481130:intron 15.0%
!!! CAATTTATTTCATTTTTTAG+CGG + chr3_3:86888540-86888559 Msa0481130:intron 15.0%
!! AACAATATAAACTTATACAT+AGG + chr3_3:86890362-86890381 Msa0481130:intron 15.0%
!! GAAAAATATTTAACAAATAC+AGG - chr3_3:86891917-86891936 None:intergenic 15.0%
!! CAATAAATTTCTTTAATTCA+GGG - chr3_3:86892628-86892647 None:intergenic 15.0%
!! TCAATAAATTTCTTTAATTC+AGG - chr3_3:86892629-86892648 None:intergenic 15.0%
!!! TTCATAATTGTTCATAATTT+TGG + chr3_3:86893002-86893021 Msa0481130:intron 15.0%
!!! TCATAATTGTTCATAATTTT+GGG + chr3_3:86893003-86893022 Msa0481130:intron 15.0%
!! TAAATACATATATTCAAGAT+TGG + chr3_3:86893077-86893096 Msa0481130:CDS 15.0%
!! AAAGATAACATAAGAAAATA+AGG + chr3_3:86894148-86894167 Msa0481130:intron 15.0%
!! AAGATAACATAAGAAAATAA+GGG + chr3_3:86894149-86894168 Msa0481130:intron 15.0%
!! CAAATTATCATGAATAATTG+AGG + chr3_3:86886890-86886909 Msa0481130:intron 20.0%
!!! TTAATTTGAATTTTGCAGAA+CGG + chr3_3:86886961-86886980 Msa0481130:intron 20.0%
!! TAGTATCTTATAATACTCTT+AGG - chr3_3:86887401-86887420 None:intergenic 20.0%
!! ACTAAGATGATATATTAAGA+AGG + chr3_3:86888149-86888168 Msa0481130:intron 20.0%
!!! CTATTAGCAATGTTTTTATA+AGG + chr3_3:86888922-86888941 Msa0481130:intron 20.0%
!! TAAAACAAGGAATAAACAAA+AGG - chr3_3:86889111-86889130 None:intergenic 20.0%
!! TCTATTTAACATAAGAATCA+TGG - chr3_3:86889282-86889301 None:intergenic 20.0%
!! TAAAAAAAACAGTTATCCAT+AGG - chr3_3:86889368-86889387 None:intergenic 20.0%
!! TTTAAAGAGAGTAAAAATTG+TGG - chr3_3:86889501-86889520 None:intergenic 20.0%
!! ATGTTCAAATTTCATTAAAC+AGG + chr3_3:86889626-86889645 Msa0481130:intron 20.0%
!! CATAAGTAAGTAAAAGTAAA+AGG - chr3_3:86890426-86890445 None:intergenic 20.0%
!! ACCTTCTATATTAAATTGTA+CGG + chr3_3:86890817-86890836 Msa0481130:intron 20.0%
!! TGTAAACAGAATTATAGAAA+TGG - chr3_3:86891025-86891044 None:intergenic 20.0%
!! AGAAGTAAATGAAAAATTCT+TGG + chr3_3:86891338-86891357 Msa0481130:CDS 20.0%
!!! ACAACTTATTTCTTAATCAA+AGG - chr3_3:86891438-86891457 None:intergenic 20.0%
!! TTAAATTACCTTTCTTAACA+CGG - chr3_3:86891510-86891529 None:intergenic 20.0%
!! TATGAACAATTATGAAGTTT+AGG - chr3_3:86892998-86893017 None:intergenic 20.0%
!! AGTTGAAAATTACAATTAGT+AGG - chr3_3:86893293-86893312 None:intergenic 20.0%
!! TTAATGATTCTTTAAATCCT+TGG + chr3_3:86893521-86893540 Msa0481130:intron 20.0%
!!! ATGTTATCTTTGTTTTCAAA+AGG - chr3_3:86894139-86894158 None:intergenic 20.0%
!! AGATAACATAAGAAAATAAG+GGG + chr3_3:86894150-86894169 Msa0481130:intron 20.0%
!! GATAATTGTATACTAGTAAA+CGG + chr3_3:86894239-86894258 Msa0481130:intron 20.0%
!! GTTTAAATAAATGGTTATTG+TGG + chr3_3:86894586-86894605 Msa0481130:three_prime_UTR 20.0%
!! AACATAGTAAAGATAAAACA+AGG - chr3_3:86894823-86894842 None:intergenic 20.0%
! ATTATCATGAATAATTGAGG+CGG + chr3_3:86886893-86886912 Msa0481130:intron 25.0%
!!! TCTGGTTACATAAGTTTTAT+CGG + chr3_3:86887162-86887181 Msa0481130:intron 25.0%
!! TATGTTTTCATAAGCTTTCT+TGG - chr3_3:86887254-86887273 None:intergenic 25.0%
! AATAAGTTGTTTATCCAAAC+AGG + chr3_3:86887374-86887393 Msa0481130:intron 25.0%
! ATAAGTTGTTTATCCAAACA+GGG + chr3_3:86887375-86887394 Msa0481130:intron 25.0%
!! TATACAACTTGATGTGTTTT+TGG + chr3_3:86887419-86887438 Msa0481130:intron 25.0%
!!! ACTAATTGACTTTTTATGCA+AGG - chr3_3:86887448-86887467 None:intergenic 25.0%
! CTATTATTTAATGAATGAGG+TGG + chr3_3:86887593-86887612 Msa0481130:intron 25.0%
! AATGAAATATTGTGGTTTCA+CGG - chr3_3:86887838-86887857 None:intergenic 25.0%
!!! TACGTTGCTTTTTATTACTT+AGG + chr3_3:86887894-86887913 Msa0481130:intron 25.0%
! GAATCTTGTATTCCTTTATT+AGG + chr3_3:86888255-86888274 Msa0481130:intron 25.0%
!!! TACTTCAATTTATTTTCGAG+TGG + chr3_3:86888344-86888363 Msa0481130:intron 25.0%
!!! TTAGCAATGTTTTTATAAGG+AGG + chr3_3:86888925-86888944 Msa0481130:intron 25.0%
!!! TAGCAATGTTTTTATAAGGA+GGG + chr3_3:86888926-86888945 Msa0481130:intron 25.0%
! GTTTAATCCTTAACGATTTA+AGG + chr3_3:86888984-86889003 Msa0481130:intron 25.0%
! ATAGTTACCTTAAATCGTTA+AGG - chr3_3:86888994-86889013 None:intergenic 25.0%
!! GAAAAATCATGATCAACTTT+TGG + chr3_3:86889014-86889033 Msa0481130:intron 25.0%
! ACATGTAAGTTCATAAAACA+AGG - chr3_3:86889124-86889143 None:intergenic 25.0%
! ATGAAGAACTGAAATAAAAC+CGG + chr3_3:86889545-86889564 Msa0481130:intron 25.0%
! AACATAGAACAGTCAATATA+TGG - chr3_3:86889611-86889630 None:intergenic 25.0%
! CTTAATTTAGAGAAAGAAAG+AGG - chr3_3:86889767-86889786 None:intergenic 25.0%
!!! ACATTGTTTTTGATCTTTGA+AGG + chr3_3:86890150-86890169 Msa0481130:intron 25.0%
!! AAACTTATACATAGGAGTTT+TGG + chr3_3:86890370-86890389 Msa0481130:intron 25.0%
! TAACACCAGATTATATATGT+AGG + chr3_3:86890683-86890702 Msa0481130:intron 25.0%
! AACACCAGATTATATATGTA+GGG + chr3_3:86890684-86890703 Msa0481130:intron 25.0%
! TATTCCCTACATATATAATC+TGG - chr3_3:86890691-86890710 None:intergenic 25.0%
! ATATATGTAGGGAATATACT+TGG + chr3_3:86890695-86890714 Msa0481130:intron 25.0%
! TATATGTAGGGAATATACTT+GGG + chr3_3:86890696-86890715 Msa0481130:intron 25.0%
! TAATATAGAAGGTCCTTTAT+GGG - chr3_3:86890810-86890829 None:intergenic 25.0%
! TTAATATAGAAGGTCCTTTA+TGG - chr3_3:86890811-86890830 None:intergenic 25.0%
! ACCGTACAATTTAATATAGA+AGG - chr3_3:86890821-86890840 None:intergenic 25.0%
! GCAATTTAGATATGCATTAT+AGG - chr3_3:86891090-86891109 None:intergenic 25.0%
! ATGAATTTCTCAATACTTCT+TGG + chr3_3:86891178-86891197 Msa0481130:intron 25.0%
! AAATGAATGTCAAACTCAAT+AGG - chr3_3:86891648-86891667 None:intergenic 25.0%
! AAAGAAGATAAAGAAAACTC+CGG + chr3_3:86892066-86892085 Msa0481130:CDS 25.0%
!! TTAGTTTGAAGATATAACTG+TGG + chr3_3:86892459-86892478 Msa0481130:intron 25.0%
! TATTTAGTAGAAAAACACCA+GGG - chr3_3:86892508-86892527 None:intergenic 25.0%
! TTATTTAGTAGAAAAACACC+AGG - chr3_3:86892509-86892528 None:intergenic 25.0%
! AGAAATTTATTGAGAAAGCT+AGG + chr3_3:86892636-86892655 Msa0481130:CDS 25.0%
! GAAAAGAATGAAAATACCAT+TGG - chr3_3:86892686-86892705 None:intergenic 25.0%
! TATATTCAAGATTGGAGAAA+TGG + chr3_3:86893085-86893104 Msa0481130:CDS 25.0%
! AAACTGAAATAAACAAGCAT+AGG - chr3_3:86893191-86893210 None:intergenic 25.0%
! TAGCCAACTATATTATCAAT+TGG + chr3_3:86893247-86893266 Msa0481130:intron 25.0%
!! TGACCAATTGATAATATAGT+TGG - chr3_3:86893253-86893272 None:intergenic 25.0%
!! CTAATTGTAATTTTCAACTG+CGG + chr3_3:86893294-86893313 Msa0481130:intron 25.0%
! AAATTTCATCAATACAAGTG+CGG - chr3_3:86893415-86893434 None:intergenic 25.0%
!! AACTAAGCCTTATAATTAGA+GGG - chr3_3:86893572-86893591 None:intergenic 25.0%
!! AAACTAAGCCTTATAATTAG+AGG - chr3_3:86893573-86893592 None:intergenic 25.0%
! TTAAATGTTACGACGATAAA+TGG + chr3_3:86893615-86893634 Msa0481130:intron 25.0%
! AGATCCTAATTCAAATGAAA+GGG - chr3_3:86893837-86893856 None:intergenic 25.0%
! CATGTAAACATTTGTATACA+AGG - chr3_3:86893896-86893915 None:intergenic 25.0%
! TGCAGATTAATCATACATAA+AGG - chr3_3:86894082-86894101 None:intergenic 25.0%
! AAATCATATCACTTTCACTA+TGG + chr3_3:86894217-86894236 Msa0481130:intron 25.0%
!!! AATTTGTTGTGTTTATTGCA+GGG + chr3_3:86894280-86894299 Msa0481130:intron 25.0%
!! CAACTATATTCTTAGGATTT+TGG - chr3_3:86894398-86894417 None:intergenic 25.0%
! CAAGTTTCAACTATATTCTT+AGG - chr3_3:86894405-86894424 None:intergenic 25.0%
!!! GAGTTGTTGGTTTAAATAAA+TGG + chr3_3:86894577-86894596 Msa0481130:three_prime_UTR 25.0%
! CAGGAATTGAGTTAATAATT+AGG + chr3_3:86894736-86894755 Msa0481130:three_prime_UTR 25.0%
! AATTGAGTTAATAATTAGGC+AGG + chr3_3:86894740-86894759 Msa0481130:intron 25.0%
! TAGTAAAGATAAAACAAGGA+AGG - chr3_3:86894819-86894838 None:intergenic 25.0%
! CATTTAATTCACAGGTTTAA+TGG - chr3_3:86894909-86894928 None:intergenic 25.0%
! AAAAAGGTCATTTAATTCAC+AGG - chr3_3:86894917-86894936 None:intergenic 25.0%
!! GTATTTAAGGCTCTTAAAAA+AGG - chr3_3:86894933-86894952 None:intergenic 25.0%
! TAAGAGCCTTAAATACAAAT+AGG + chr3_3:86894937-86894956 Msa0481130:three_prime_UTR 25.0%
! AGCATTCCTATTTGTATTTA+AGG - chr3_3:86894946-86894965 None:intergenic 25.0%
!! GAGATTCAAGTTTGATTTGA+AGG - chr3_3:86886634-86886653 None:intergenic 30.0%
!! CGATGAAAATGCTTTTGTTT+TGG - chr3_3:86886663-86886682 None:intergenic 30.0%
ATCAAAATGAGTAGCAGAAA+AGG + chr3_3:86886732-86886751 Msa0481130:exon 30.0%
TCAAAATGAGTAGCAGAAAA+GGG + chr3_3:86886733-86886752 Msa0481130:exon 30.0%
AAAATGGAAGAAGGAAAATG+AGG - chr3_3:86886858-86886877 None:intergenic 30.0%
GATATAAGAAAATGCTACAC+AGG + chr3_3:86887075-86887094 Msa0481130:intron 30.0%
! CCTTTTACATGAAAACCAAA+GGG - chr3_3:86887105-86887124 None:intergenic 30.0%
! ACCTTTTACATGAAAACCAA+AGG - chr3_3:86887106-86887125 None:intergenic 30.0%
TAAGACAATAAGCTGAAAAC+AGG - chr3_3:86887225-86887244 None:intergenic 30.0%
TGGATAAACAACTTATTTGC+AGG - chr3_3:86887371-86887390 None:intergenic 30.0%
ATCAGTGTATTGTTGGAAAT+TGG - chr3_3:86887496-86887515 None:intergenic 30.0%
AAACAACATCAGTGTATTGT+TGG - chr3_3:86887503-86887522 None:intergenic 30.0%
TATTTAATGAATGAGGTGGA+TGG + chr3_3:86887597-86887616 Msa0481130:intron 30.0%
ATGTCCATTGAAGTTAACTT+TGG + chr3_3:86887732-86887751 Msa0481130:intron 30.0%
ATCACCAAAGTTAACTTCAA+TGG - chr3_3:86887739-86887758 None:intergenic 30.0%
TTCTGGACAATGAAATATTG+TGG - chr3_3:86887846-86887865 None:intergenic 30.0%
GAAAATGACACTGAAAATTC+TGG - chr3_3:86887863-86887882 None:intergenic 30.0%
!! TTTAAAGGAGAGTTTTGATC+AGG + chr3_3:86887968-86887987 Msa0481130:CDS 30.0%
! GAATTGAACAACTTTCAAGT+TGG + chr3_3:86888048-86888067 Msa0481130:intron 30.0%
TACTGTTCAAAAAATTGCGA+AGG + chr3_3:86888072-86888091 Msa0481130:intron 30.0%
ACTGTTCAAAAAATTGCGAA+GGG + chr3_3:86888073-86888092 Msa0481130:intron 30.0%
TATTCCTTTATTAGGTGCAA+AGG + chr3_3:86888263-86888282 Msa0481130:intron 30.0%
ATTCCTTTATTAGGTGCAAA+GGG + chr3_3:86888264-86888283 Msa0481130:intron 30.0%
!! GGTTTTGATATTTCTGCATT+TGG + chr3_3:86888300-86888319 Msa0481130:CDS 30.0%
! TTTGATATTTCTGCATTTGG+TGG + chr3_3:86888303-86888322 Msa0481130:CDS 30.0%
ATCATCACTGATACAATAGA+AGG + chr3_3:86888458-86888477 Msa0481130:CDS 30.0%
TTACCAGTTCTCTCTAATAT+AGG + chr3_3:86888685-86888704 Msa0481130:intron 30.0%
GAATATCAAATGAGTTTCCT+CGG - chr3_3:86889184-86889203 None:intergenic 30.0%
AGAACAGTCAATATATGGTT+TGG - chr3_3:86889606-86889625 None:intergenic 30.0%
CAAATTTCATTAAACAGGAC+AGG + chr3_3:86889631-86889650 Msa0481130:intron 30.0%
!! TTTTTCAGTCTTGAAAAGAC+TGG - chr3_3:86889923-86889942 None:intergenic 30.0%
ACTGAAAAAATAGAACCACT+TGG + chr3_3:86889934-86889953 Msa0481130:CDS 30.0%
CTGAAAAAATAGAACCACTT+GGG + chr3_3:86889935-86889954 Msa0481130:CDS 30.0%
TGAAAAAATAGAACCACTTG+GGG + chr3_3:86889936-86889955 Msa0481130:CDS 30.0%
!!! CACATATTTTTTGCTCAAAG+AGG + chr3_3:86890226-86890245 Msa0481130:CDS 30.0%
CTCTGCAATAAAGAAGAATA+TGG + chr3_3:86890317-86890336 Msa0481130:intron 30.0%
AATTTGCAAATTAAGCCACA+GGG + chr3_3:86890598-86890617 Msa0481130:intron 30.0%
TCAATAAGAAGCTAAACTGA+AGG - chr3_3:86890650-86890669 None:intergenic 30.0%
ATAAAACCAGGTGGATATAT+AGG + chr3_3:86890747-86890766 Msa0481130:intron 30.0%
! TTGTACGGTAGTTGATATAA+AGG + chr3_3:86890832-86890851 Msa0481130:intron 30.0%
AATTAATGGTTGCAATGCTT+AGG + chr3_3:86890952-86890971 Msa0481130:intron 30.0%
AAAACTCAGTACACAAAATC+AGG - chr3_3:86891140-86891159 None:intergenic 30.0%
AATGAAAAATTCTTGGATGC+TGG + chr3_3:86891345-86891364 Msa0481130:CDS 30.0%
TGAGAACAAACTATATCAGA+TGG + chr3_3:86891386-86891405 Msa0481130:intron 30.0%
!! GTAAAGTTTGATAGTGACTA+GGG - chr3_3:86891416-86891435 None:intergenic 30.0%
TAAGAAAGGTAATTTAACCC+AGG + chr3_3:86891513-86891532 Msa0481130:CDS 30.0%
AACCCAGGAAAAATTTGAAA+AGG + chr3_3:86891528-86891547 Msa0481130:CDS 30.0%
! TGCCTTTTCAAATTTTTCCT+GGG - chr3_3:86891533-86891552 None:intergenic 30.0%
! ATGCCTTTTCAAATTTTTCC+TGG - chr3_3:86891534-86891553 None:intergenic 30.0%
TTTGACATTCATTTACGTCA+TGG + chr3_3:86891654-86891673 Msa0481130:intron 30.0%
TTACTACCAAGTATACAATG+AGG - chr3_3:86891809-86891828 None:intergenic 30.0%
AATAATTCGATCTTGAGACT+TGG - chr3_3:86891870-86891889 None:intergenic 30.0%
AAGTCTCAAGATCGAATTAT+TGG + chr3_3:86891869-86891888 Msa0481130:CDS 30.0%
AACAAGTCAACTATTACTTG+AGG - chr3_3:86892037-86892056 None:intergenic 30.0%
!! TACAGGATTTGCTGTTAATA+GGG + chr3_3:86892105-86892124 Msa0481130:CDS 30.0%
TGGTTACTGCTTTATCAATT+TGG - chr3_3:86892189-86892208 None:intergenic 30.0%
GATAAAGCAGTAACCAAATT+TGG + chr3_3:86892193-86892212 Msa0481130:CDS 30.0%
!! AGGAAAGTTCTGAACAAATT+GGG - chr3_3:86892363-86892382 None:intergenic 30.0%
! ATTGATTTATAAGTTCGCTC+AGG - chr3_3:86892383-86892402 None:intergenic 30.0%
ACCTGTTAAAATAAATTCCC+TGG + chr3_3:86892488-86892507 Msa0481130:intron 30.0%
!!! ACCAGGGAATTTATTTTAAC+AGG - chr3_3:86892492-86892511 None:intergenic 30.0%
ATATAACACTTGCTTCTAAC+AGG + chr3_3:86892545-86892564 Msa0481130:intron 30.0%
AATTTCTTTAATTCAGGGTC+AGG - chr3_3:86892623-86892642 None:intergenic 30.0%
TGAAAATACCATTGGATCAA+CGG - chr3_3:86892678-86892697 None:intergenic 30.0%
!!! ATAATCCGTGCCATATTTTT+TGG + chr3_3:86892706-86892725 Msa0481130:intron 30.0%
TAGTCACTAGCCAAAAAATA+TGG - chr3_3:86892719-86892738 None:intergenic 30.0%
!! ATTTTAACGGTAAATTCCAC+CGG + chr3_3:86892763-86892782 Msa0481130:intron 30.0%
AAACATGCCAAATAATTTCC+AGG - chr3_3:86892974-86892993 None:intergenic 30.0%
CTATATTATCAATTGGTCAC+TGG + chr3_3:86893254-86893273 Msa0481130:intron 30.0%
ATAAAACATACAGCTATGCT+TGG + chr3_3:86893440-86893459 Msa0481130:intron 30.0%
ACCAAATCCCTCTAATTATA+AGG + chr3_3:86893562-86893581 Msa0481130:intron 30.0%
TCGTCGTAACATTTAATACA+AGG - chr3_3:86893611-86893630 None:intergenic 30.0%
ATAGCTACAAGAGATAAGAT+AGG + chr3_3:86893638-86893657 Msa0481130:intron 30.0%
! TCTATCACCTTTTCTACAAT+AGG - chr3_3:86893696-86893715 None:intergenic 30.0%
GAGATCCTAATTCAAATGAA+AGG - chr3_3:86893838-86893857 None:intergenic 30.0%
TATTTACTTTATCCCTCGAA+GGG - chr3_3:86893926-86893945 None:intergenic 30.0%
TTATTTACTTTATCCCTCGA+AGG - chr3_3:86893927-86893946 None:intergenic 30.0%
TACTACTAGCATGTTATTCA+AGG - chr3_3:86894038-86894057 None:intergenic 30.0%
!! GAATTTGTTGTGTTTATTGC+AGG + chr3_3:86894279-86894298 Msa0481130:intron 30.0%
!! TAGGATTTTGGAGAAAGAAA+GGG - chr3_3:86894386-86894405 None:intergenic 30.0%
!! TTAGGATTTTGGAGAAAGAA+AGG - chr3_3:86894387-86894406 None:intergenic 30.0%
CAACTCAATACTTCCATTAT+TGG - chr3_3:86894563-86894582 None:intergenic 30.0%
!! TAATGGAAGTATTGAGTTGT+TGG + chr3_3:86894564-86894583 Msa0481130:three_prime_UTR 30.0%
ATGTTTCCTCATAAGTTTAC+CGG + chr3_3:86894650-86894669 Msa0481130:three_prime_UTR 30.0%
ATTGACATTGCCATTATTAG+TGG - chr3_3:86894690-86894709 None:intergenic 30.0%
TTTCCTCTGCATTAAAAATC+AGG - chr3_3:86894868-86894887 None:intergenic 30.0%
AATTCACAGGTTTAATGGTT+AGG - chr3_3:86894904-86894923 None:intergenic 30.0%
CAACCTGTTGAAGAATAATA+TGG + chr3_3:86894985-86895004 Msa0481130:three_prime_UTR 30.0%
ATCAAAGGAGAGAGAATTGA+CGG - chr3_3:86886817-86886836 None:intergenic 35.0%
GAAAAGCAGTATACCATCAA+AGG - chr3_3:86886832-86886851 None:intergenic 35.0%
GTGAAGAAGAAAATGGAAGA+AGG - chr3_3:86886867-86886886 None:intergenic 35.0%
TTTGCACGTGAAGAAGAAAA+TGG - chr3_3:86886874-86886893 None:intergenic 35.0%
!!! CCCTTTGGTTTTCATGTAAA+AGG + chr3_3:86887102-86887121 Msa0481130:intron 35.0%
AAGGAAAAGATGAGCTTGAA+TGG + chr3_3:86887138-86887157 Msa0481130:intron 35.0%
ACTGTAGCCGTGATTATATT+TGG - chr3_3:86887676-86887695 None:intergenic 35.0%
TCCTTTAAACTTCGCAATAC+TGG - chr3_3:86887957-86887976 None:intergenic 35.0%
TATACAAAGAGATGACGTCA+AGG + chr3_3:86887992-86888011 Msa0481130:CDS 35.0%
TTTCCCTTTGCACCTAATAA+AGG - chr3_3:86888270-86888289 None:intergenic 35.0%
!!! CAATTTATTTTCGAGTGGAG+TGG + chr3_3:86888349-86888368 Msa0481130:intron 35.0%
ATGCCTATATTAGAGAGAAC+TGG - chr3_3:86888691-86888710 None:intergenic 35.0%
AATCTATTACCTCCAAATCC+AGG - chr3_3:86888779-86888798 None:intergenic 35.0%
! AGATTTATGATGTGCTGTTC+TGG - chr3_3:86888960-86888979 None:intergenic 35.0%
TCATGATTAACTTCGACGAA+TGG + chr3_3:86889045-86889064 Msa0481130:intron 35.0%
ACTTACATGTAAACTGCTAC+TGG + chr3_3:86889134-86889153 Msa0481130:intron 35.0%
TTCCCTAGTAATGTTAACCT+TGG + chr3_3:86889397-86889416 Msa0481130:intron 35.0%
TCCCTAGTAATGTTAACCTT+GGG + chr3_3:86889398-86889417 Msa0481130:intron 35.0%
ACCCAAGGTTAACATTACTA+GGG - chr3_3:86889402-86889421 None:intergenic 35.0%
AACCCAAGGTTAACATTACT+AGG - chr3_3:86889403-86889422 None:intergenic 35.0%
CTAAGACAATTTACAACCCA+AGG - chr3_3:86889417-86889436 None:intergenic 35.0%
! CTTGGGTTGTAAATTGTCTT+AGG + chr3_3:86889415-86889434 Msa0481130:intron 35.0%
!! AAAGGCACTTGAAATGATGT+TGG + chr3_3:86889471-86889490 Msa0481130:CDS 35.0%
! CATTAAACAGGACAGGTTTT+TGG + chr3_3:86889638-86889657 Msa0481130:intron 35.0%
!!! TTTTGGTTCAGTTCTCCATT+TGG + chr3_3:86889655-86889674 Msa0481130:intron 35.0%
TTAGAGTTGTGACTAAGACA+TGG + chr3_3:86889713-86889732 Msa0481130:intron 35.0%
!! AGGAAAGGATGCTTTTAGTT+CGG + chr3_3:86889804-86889823 Msa0481130:CDS 35.0%
TTGAAAAGACTGGTAATCCA+TGG - chr3_3:86889913-86889932 None:intergenic 35.0%
ATAACATCAATGCAAACCAG+AGG - chr3_3:86890027-86890046 None:intergenic 35.0%
! TGCATTGATGTTATTGAAGC+AGG + chr3_3:86890033-86890052 Msa0481130:CDS 35.0%
! AGATATTTTCCCACTTGAAG+GGG - chr3_3:86890299-86890318 None:intergenic 35.0%
! GAGATATTTTCCCACTTGAA+GGG - chr3_3:86890300-86890319 None:intergenic 35.0%
! AGAGATATTTTCCCACTTGA+AGG - chr3_3:86890301-86890320 None:intergenic 35.0%
CAATTTGCAAATTAAGCCAC+AGG + chr3_3:86890597-86890616 Msa0481130:intron 35.0%
AGAAGAACAAAAATTCCCTG+TGG - chr3_3:86890616-86890635 None:intergenic 35.0%
! TTTAGCTTCTTATTGAGCTG+TGG + chr3_3:86890654-86890673 Msa0481130:intron 35.0%
TGAGTCTGATCTCTTAACTT+GGG + chr3_3:86890721-86890740 Msa0481130:intron 35.0%
GTGGATATATAGGAGAGTTA+TGG + chr3_3:86890757-86890776 Msa0481130:intron 35.0%
TTATGGCCAAGAACTGAATT+TGG + chr3_3:86890774-86890793 Msa0481130:intron 35.0%
AAAAGGCCAAATTCAGTTCT+TGG - chr3_3:86890783-86890802 None:intergenic 35.0%
!! TGGCCTTTTATTTCCCATAA+AGG + chr3_3:86890794-86890813 Msa0481130:intron 35.0%
GGTCCTTTATGGGAAATAAA+AGG - chr3_3:86890800-86890819 None:intergenic 35.0%
TATAGGCACAGATTCAAGAT+GGG - chr3_3:86891073-86891092 None:intergenic 35.0%
TTATAGGCACAGATTCAAGA+TGG - chr3_3:86891074-86891093 None:intergenic 35.0%
GCTGGTATCAATAGGATTAA+AGG + chr3_3:86891363-86891382 Msa0481130:CDS 35.0%
!! GGTAAAGTTTGATAGTGACT+AGG - chr3_3:86891417-86891436 None:intergenic 35.0%
!! AGCAAAGATTTGTTGCTTCA+AGG - chr3_3:86891765-86891784 None:intergenic 35.0%
TAACACTTCCACAATTGACT+TGG + chr3_3:86891826-86891845 Msa0481130:CDS 35.0%
!! GTACAGGATTTGCTGTTAAT+AGG + chr3_3:86892104-86892123 Msa0481130:CDS 35.0%
AGAGAGTTGCTTGTGTATAT+GGG - chr3_3:86892138-86892157 None:intergenic 35.0%
AAGAGAGTTGCTTGTGTATA+TGG - chr3_3:86892139-86892158 None:intergenic 35.0%
TCCAGGCATTAATACCTTAA+AGG - chr3_3:86892232-86892251 None:intergenic 35.0%
TGTTACAAACTAGACCTTTC+AGG - chr3_3:86892281-86892300 None:intergenic 35.0%
!! CAGGAAAGTTCTGAACAAAT+TGG - chr3_3:86892364-86892383 None:intergenic 35.0%
TCTTATCCTCTTGCAAAAGA+GGG - chr3_3:86892412-86892431 None:intergenic 35.0%
! TCTTTTGCAAGAGGATAAGA+GGG + chr3_3:86892412-86892431 Msa0481130:CDS 35.0%
TTTGTATGATGATAGACGCA+AGG + chr3_3:86892592-86892611 Msa0481130:CDS 35.0%
ACTAGCCAAAAAATATGGCA+CGG - chr3_3:86892714-86892733 None:intergenic 35.0%
TCTTGATATTGCTGCTATCA+TGG + chr3_3:86892920-86892939 Msa0481130:CDS 35.0%
CTTGATATTGCTGCTATCAT+GGG + chr3_3:86892921-86892940 Msa0481130:CDS 35.0%
GGTTTGTCCTGGAAATTATT+TGG + chr3_3:86892964-86892983 Msa0481130:intron 35.0%
!!! TTTTGGGATTGAAATTCTCC+AGG + chr3_3:86893019-86893038 Msa0481130:intron 35.0%
! TTTGGGATTGAAATTCTCCA+GGG + chr3_3:86893020-86893039 Msa0481130:intron 35.0%
GTATTTAGATCCAAGAGAGT+CGG - chr3_3:86893064-86893083 None:intergenic 35.0%
GCCTTATAATTAGAGGGATT+TGG - chr3_3:86893566-86893585 None:intergenic 35.0%
AGATAGGAAACATTCGTCAA+AGG + chr3_3:86893654-86893673 Msa0481130:intron 35.0%
ACATTCGTCAAAGGAAAAGT+TGG + chr3_3:86893663-86893682 Msa0481130:intron 35.0%
CATTCGTCAAAGGAAAAGTT+GGG + chr3_3:86893664-86893683 Msa0481130:intron 35.0%
GATAGCTCCTATTGTAGAAA+AGG + chr3_3:86893686-86893705 Msa0481130:intron 35.0%
ACATCAGATCTCTTAAGACA+AGG - chr3_3:86893720-86893739 None:intergenic 35.0%
AACAATGCTTCATGCTTCTA+TGG - chr3_3:86893756-86893775 None:intergenic 35.0%
ACCCATTCCAACATGAATTA+CGG + chr3_3:86893776-86893795 Msa0481130:intron 35.0%
TCCGTAATTCATGTTGGAAT+GGG - chr3_3:86893780-86893799 None:intergenic 35.0%
ATCTTGTCCGTAATTCATGT+TGG - chr3_3:86893786-86893805 None:intergenic 35.0%
CACTCCCTTTCATTTGAATT+AGG + chr3_3:86893830-86893849 Msa0481130:intron 35.0%
TTTGAATTAGGATCTCCCAA+TGG + chr3_3:86893842-86893861 Msa0481130:intron 35.0%
TTGAATTAGGATCTCCCAAT+GGG + chr3_3:86893843-86893862 Msa0481130:intron 35.0%
GTTAAGATGAAAACAAGGAG+TGG - chr3_3:86893950-86893969 None:intergenic 35.0%
! GTGCTGTTAAGATGAAAACA+AGG - chr3_3:86893955-86893974 None:intergenic 35.0%
!! GGTCGAAATAGAAGTACTTT+AGG + chr3_3:86894480-86894499 Msa0481130:three_prime_UTR 35.0%
!! TACTTTAGGATCAGCTATAC+AGG + chr3_3:86894494-86894513 Msa0481130:three_prime_UTR 35.0%
GTTGTTACTAGCACCAATAA+TGG + chr3_3:86894547-86894566 Msa0481130:three_prime_UTR 35.0%
TAAATGGTTATTGTGGTACG+TGG + chr3_3:86894593-86894612 Msa0481130:three_prime_UTR 35.0%
!!! GTTTTGAAGAGAGAATCACA+AGG - chr3_3:86894786-86894805 None:intergenic 35.0%
ACTATGTTACTCAGTAACTC+AGG + chr3_3:86894835-86894854 Msa0481130:intron 35.0%
! CATCCTGATTTTTAATGCAG+AGG + chr3_3:86894862-86894881 Msa0481130:intron 35.0%
GGTCCATATTATTCTTCAAC+AGG - chr3_3:86894991-86895010 None:intergenic 35.0%
! CAACAGTTTTCAGTAGATTG+TGG - chr3_3:86895030-86895049 None:intergenic 35.0%
ATCTACTGAAAACTGTTGTC+AGG + chr3_3:86895032-86895051 Msa0481130:three_prime_UTR 35.0%
TCTACTGAAAACTGTTGTCA+GGG + chr3_3:86895033-86895052 Msa0481130:three_prime_UTR 35.0%
! AAGAGAACAAGTGTCGTGAA+CGG - chr3_3:86886611-86886630 None:intergenic 40.0%
GTTATGAATGTTGGAGCTGA+TGG + chr3_3:86886762-86886781 Msa0481130:CDS 40.0%
!! AGGATTGATGATGGTGATGA+TGG - chr3_3:86886793-86886812 None:intergenic 40.0%
TCAAAGGAGAGAGAATTGAC+GGG - chr3_3:86886816-86886835 None:intergenic 40.0%
GTCAATTCTCTCTCCTTTGA+TGG + chr3_3:86886816-86886835 Msa0481130:CDS 40.0%
AAGATGAGCTTGAATGGATC+TGG + chr3_3:86887144-86887163 Msa0481130:intron 40.0%
TAATACTCTTAGGCCCTGTT+TGG - chr3_3:86887391-86887410 None:intergenic 40.0%
GCCAGTATTGCGAAGTTTAA+AGG + chr3_3:86887953-86887972 Msa0481130:intron 40.0%
! GTCAAGGCAATTGTTGTTAC+AGG + chr3_3:86888008-86888027 Msa0481130:CDS 40.0%
TGCTTCTCCAGAGATAATCT+CGG + chr3_3:86888202-86888221 Msa0481130:intron 40.0%
AAGTTGACCGAGATTATCTC+TGG - chr3_3:86888212-86888231 None:intergenic 40.0%
! GGTGCAAAGGGAAAATTTTC+TGG + chr3_3:86888276-86888295 Msa0481130:intron 40.0%
! GCAAAGGGAAAATTTTCTGG+AGG + chr3_3:86888279-86888298 Msa0481130:CDS 40.0%
ATTTCAATCGATATCCACCC+AGG - chr3_3:86888440-86888459 None:intergenic 40.0%
ATTATCCCAAGCTGAAGTTC+AGG - chr3_3:86888755-86888774 None:intergenic 40.0%
CTTGGGATAATTCCTGGATT+TGG + chr3_3:86888764-86888783 Msa0481130:CDS 40.0%
TGGATGATGTGTTGAATGAC+TGG + chr3_3:86889154-86889173 Msa0481130:intron 40.0%
GGATGATGTGTTGAATGACT+GGG + chr3_3:86889155-86889174 Msa0481130:intron 40.0%
TAAGTCAAAGTTCGTACCTG+AGG + chr3_3:86889243-86889262 Msa0481130:intron 40.0%
ACCACGAAATTGGATAGATC+CGG - chr3_3:86889567-86889586 None:intergenic 40.0%
GATCTATCCAATTTCGTGGT+TGG + chr3_3:86889567-86889586 Msa0481130:intron 40.0%
AAACGCAACTGCATTCCAAA+TGG - chr3_3:86889673-86889692 None:intergenic 40.0%
! AAAGCATCCTTTCCTTTCAC+TGG - chr3_3:86889799-86889818 None:intergenic 40.0%
!!! GGAAAGGATGCTTTTAGTTC+GGG + chr3_3:86889805-86889824 Msa0481130:CDS 40.0%
!!! GAAAGGATGCTTTTAGTTCG+GGG + chr3_3:86889806-86889825 Msa0481130:CDS 40.0%
ATTGAAGCAGGAATAGTGTC+TGG + chr3_3:86890045-86890064 Msa0481130:CDS 40.0%
TGCTCAAAGAGGAACATCTA+AGG + chr3_3:86890237-86890256 Msa0481130:CDS 40.0%
ACATTTCTTCCCCTTCAAGT+GGG + chr3_3:86890287-86890306 Msa0481130:intron 40.0%
TTTGCAAATTGTGCTCCACA+GGG - chr3_3:86890588-86890607 None:intergenic 40.0%
ATTTGCAAATTGTGCTCCAC+AGG - chr3_3:86890589-86890608 None:intergenic 40.0%
CTGAGTCTGATCTCTTAACT+TGG + chr3_3:86890720-86890739 Msa0481130:intron 40.0%
! GAGTCTGATCTCTTAACTTG+GGG + chr3_3:86890722-86890741 Msa0481130:intron 40.0%
TAACTTGGGGCTATAAAACC+AGG + chr3_3:86890735-86890754 Msa0481130:intron 40.0%
AACTCTCCTATATATCCACC+TGG - chr3_3:86890756-86890775 None:intergenic 40.0%
GGCTGTATCTCGTTTCAAAA+TGG + chr3_3:86890988-86891007 Msa0481130:intron 40.0%
! CAATACTTCTTGGCTTGAAC+AGG + chr3_3:86891188-86891207 Msa0481130:intron 40.0%
TCTTGGATGCTGGTATCAAT+AGG + chr3_3:86891355-86891374 Msa0481130:CDS 40.0%
!! TGTAGGTTTGCTGCACAAAA+AGG - chr3_3:86891484-86891503 None:intergenic 40.0%
! AAGGCATTCTCTCTTGTCAA+AGG + chr3_3:86891547-86891566 Msa0481130:CDS 40.0%
TAGCTTCAGAGATGTAGACA+TGG + chr3_3:86891585-86891604 Msa0481130:CDS 40.0%
AGATGTAGACATGGTGATAG+AGG + chr3_3:86891594-86891613 Msa0481130:CDS 40.0%
TGTGCTTCATGCTTCATGTT+TGG + chr3_3:86891716-86891735 Msa0481130:intron 40.0%
GTGCTTCATGCTTCATGTTT+GGG + chr3_3:86891717-86891736 Msa0481130:intron 40.0%
TGTCCACCTCATTGTATACT+TGG + chr3_3:86891800-86891819 Msa0481130:CDS 40.0%
CTACCAAGTATACAATGAGG+TGG - chr3_3:86891806-86891825 None:intergenic 40.0%
!! ACAATTGACTTGGACCTGAT+CGG + chr3_3:86891836-86891855 Msa0481130:CDS 40.0%
TTATTGGAGCCCATTTCTTC+AGG + chr3_3:86891885-86891904 Msa0481130:CDS 40.0%
AGGATACCACCTGAAGAAAT+GGG - chr3_3:86891897-86891916 None:intergenic 40.0%
GAAGATAAAGAAAACTCCGG+TGG + chr3_3:86892069-86892088 Msa0481130:CDS 40.0%
! AACCAAATTTGGAATGCCCA+TGG + chr3_3:86892204-86892223 Msa0481130:CDS 40.0%
! ACCAAATTTGGAATGCCCAT+GGG + chr3_3:86892205-86892224 Msa0481130:CDS 40.0%
TAATACCTTAAAGGCCCCAT+GGG - chr3_3:86892223-86892242 None:intergenic 40.0%
TTAATACCTTAAAGGCCCCA+TGG - chr3_3:86892224-86892243 None:intergenic 40.0%
!! GCCTTTAAGGTATTAATGCC+TGG + chr3_3:86892228-86892247 Msa0481130:intron 40.0%
TGGGTATCAAGAACTTATCC+AGG - chr3_3:86892249-86892268 None:intergenic 40.0%
!! TTGTGTGACCTTGTTGGTTT+CGG + chr3_3:86892317-86892336 Msa0481130:CDS 40.0%
CTCTTATCCTCTTGCAAAAG+AGG - chr3_3:86892413-86892432 None:intergenic 40.0%
! CTCTTTTGCAAGAGGATAAG+AGG + chr3_3:86892411-86892430 Msa0481130:CDS 40.0%
!!! TTTTTGGCTAGTGACTAGTG+AGG + chr3_3:86892722-86892741 Msa0481130:intron 40.0%
TGATGCTGTGGATCTGAATA+TGG + chr3_3:86892789-86892808 Msa0481130:intron 40.0%
GCTTGTCAAGTTACAAGAGA+AGG + chr3_3:86892815-86892834 Msa0481130:intron 40.0%
TGAGATGATCTTCTTTCCTG+TGG + chr3_3:86892845-86892864 Msa0481130:CDS 40.0%
TGACTACAATACCTTCATCG+AGG - chr3_3:86892890-86892909 None:intergenic 40.0%
TATTGCTGCTATCATGGGAA+TGG + chr3_3:86892926-86892945 Msa0481130:CDS 40.0%
ATTGCTGCTATCATGGGAAT+GGG + chr3_3:86892927-86892946 Msa0481130:CDS 40.0%
ATTTCCAGGACAAACCTGTA+AGG - chr3_3:86892960-86892979 None:intergenic 40.0%
TTGGGATTGAAATTCTCCAG+GGG + chr3_3:86893021-86893040 Msa0481130:intron 40.0%
GAGAAATGGTCAGAGTTGTA+TGG + chr3_3:86893099-86893118 Msa0481130:CDS 40.0%
AAGCATAGGTTACTAACCAG+AGG - chr3_3:86893177-86893196 None:intergenic 40.0%
CATACCTGTCGTACTATTCT+AGG + chr3_3:86893218-86893237 Msa0481130:intron 40.0%
GAATCCTAGAATAGTACGAC+AGG - chr3_3:86893225-86893244 None:intergenic 40.0%
ATTATCAATTGGTCACTGGC+TGG + chr3_3:86893258-86893277 Msa0481130:intron 40.0%
! TTATCAATTGGTCACTGGCT+GGG + chr3_3:86893259-86893278 Msa0481130:intron 40.0%
! TTGTCAGTGAAGTGTCTTGT+CGG - chr3_3:86893391-86893410 None:intergenic 40.0%
GACATCAATTCTACTTGCCA+AGG - chr3_3:86893541-86893560 None:intergenic 40.0%
GTCCGTAATTCATGTTGGAA+TGG - chr3_3:86893781-86893800 None:intergenic 40.0%
GAAAATAAGGGGTTACTGTG+TGG + chr3_3:86894161-86894180 Msa0481130:intron 40.0%
GTAACAACAAACACAGCCAA+GGG - chr3_3:86894535-86894554 None:intergenic 40.0%
AGTAACAACAAACACAGCCA+AGG - chr3_3:86894536-86894555 None:intergenic 40.0%
! AATGCACCGGTAAACTTATG+AGG - chr3_3:86894659-86894678 None:intergenic 40.0%
TTGCTGCAGACCACTAATAA+TGG + chr3_3:86894677-86894696 Msa0481130:three_prime_UTR 40.0%
TCAACAGGTTGTACCTTGTA+AGG - chr3_3:86894976-86894995 None:intergenic 40.0%
! AGTTTTCAGTAGATTGTGGC+GGG - chr3_3:86895026-86895045 None:intergenic 40.0%
! CAGTTTTCAGTAGATTGTGG+CGG - chr3_3:86895027-86895046 None:intergenic 40.0%
ATTGACGGGAGGATTGATGA+TGG - chr3_3:86886802-86886821 None:intergenic 45.0%
TGCTACACAGGTATTCCCTT+TGG + chr3_3:86887087-86887106 Msa0481130:intron 45.0%
GGTGGTCTTCAAGAGTCAAA+AGG + chr3_3:86888321-86888340 Msa0481130:CDS 45.0%
GACGCTCTGTATGAATGTAG+GGG - chr3_3:86888412-86888431 None:intergenic 45.0%
GGACGCTCTGTATGAATGTA+GGG - chr3_3:86888413-86888432 None:intergenic 45.0%
TGGACGCTCTGTATGAATGT+AGG - chr3_3:86888414-86888433 None:intergenic 45.0%
! ATACAGAGCGTCCAAAACCT+GGG + chr3_3:86888420-86888439 Msa0481130:intron 45.0%
! ATCGATATCCACCCAGGTTT+TGG - chr3_3:86888434-86888453 None:intergenic 45.0%
TCAACTGCAACTGCTCAACT+AGG + chr3_3:86888725-86888744 Msa0481130:CDS 45.0%
CTTCAGCTTGGGATAATTCC+TGG + chr3_3:86888758-86888777 Msa0481130:CDS 45.0%
GGGATAATTCCTGGATTTGG+AGG + chr3_3:86888767-86888786 Msa0481130:CDS 45.0%
AAAGTTCGTACCTGAGGTGA+TGG + chr3_3:86889249-86889268 Msa0481130:intron 45.0%
AGTTTGACCATGAGTAGCAG+TGG + chr3_3:86889338-86889357 Msa0481130:intron 45.0%
TTTGTCAGACCAACAAGACG+AGG - chr3_3:86889454-86889473 None:intergenic 45.0%
! TCGTCTTGTTGGTCTGACAA+AGG + chr3_3:86889453-86889472 Msa0481130:CDS 45.0%
ACCGGATCTATCCAATTTCG+TGG + chr3_3:86889563-86889582 Msa0481130:intron 45.0%
TCCAATTTCGTGGTTGGACT+TGG + chr3_3:86889573-86889592 Msa0481130:intron 45.0%
AAGACTTCCAAGCCAGTGAA+AGG + chr3_3:86889784-86889803 Msa0481130:intron 45.0%
TTCCAAGCCAGTGAAAGGAA+AGG + chr3_3:86889789-86889808 Msa0481130:CDS 45.0%
! ATCCTTTCCTTTCACTGGCT+TGG - chr3_3:86889794-86889813 None:intergenic 45.0%
! TTTAGTTCGGGGCTTGTAGA+TGG + chr3_3:86889817-86889836 Msa0481130:CDS 45.0%
GCAGTGTTCATCAACTGATC+AGG - chr3_3:86889853-86889872 None:intergenic 45.0%
TCGACGGTCCAAAATATCCA+GGG - chr3_3:86889887-86889906 None:intergenic 45.0%
ACCAGAGGATGCTTGAGATT+GGG - chr3_3:86890012-86890031 None:intergenic 45.0%
AACCAGAGGATGCTTGAGAT+TGG - chr3_3:86890013-86890032 None:intergenic 45.0%
! AGCTGAAGCATTTGATGCAC+TGG + chr3_3:86890174-86890193 Msa0481130:CDS 45.0%
CACATTTCTTCCCCTTCAAG+TGG + chr3_3:86890286-86890305 Msa0481130:intron 45.0%
ACTAGTTCCACAGTCAACAG+GGG - chr3_3:86890478-86890497 None:intergenic 45.0%
! GACTAGTTCCACAGTCAACA+GGG - chr3_3:86890479-86890498 None:intergenic 45.0%
! AGACTAGTTCCACAGTCAAC+AGG - chr3_3:86890480-86890499 None:intergenic 45.0%
! ACTAGTCTCTGCCTAAGTGT+TGG + chr3_3:86890492-86890511 Msa0481130:intron 45.0%
GTCAGGCTAATCCAACACTT+AGG - chr3_3:86890506-86890525 None:intergenic 45.0%
!! AATCCACCAGAAGCACTTTG+TGG - chr3_3:86890528-86890547 None:intergenic 45.0%
ATTTCAAATCCCTGCACTGC+AGG + chr3_3:86890545-86890564 Msa0481130:intron 45.0%
TTGCAAATTGTGCTCCACAG+GGG - chr3_3:86890587-86890606 None:intergenic 45.0%
AGATACAGCCTATTCACACC+AGG - chr3_3:86890978-86890997 None:intergenic 45.0%
AAGGATGGCAACCTTCTTCA+CGG - chr3_3:86891250-86891269 None:intergenic 45.0%
ATCCTTGGTGGAGGACTAAT+GGG + chr3_3:86891264-86891283 Msa0481130:CDS 45.0%
CTTTCTTAACACGGCTCTGT+AGG - chr3_3:86891501-86891520 None:intergenic 45.0%
CTACAGAGCCGTGTTAAGAA+AGG + chr3_3:86891499-86891518 Msa0481130:CDS 45.0%
TTCATGCTTCATGTTTGGGC+AGG + chr3_3:86891721-86891740 Msa0481130:intron 45.0%
GATCAGGTCCAAGTCAATTG+TGG - chr3_3:86891837-86891856 None:intergenic 45.0%
!! ACTTGGTCTTTTCTCCGATC+AGG - chr3_3:86891853-86891872 None:intergenic 45.0%
CAGGATACCACCTGAAGAAA+TGG - chr3_3:86891898-86891917 None:intergenic 45.0%
AGTTAGAAAGACACAGCAGC+GGG - chr3_3:86891939-86891958 None:intergenic 45.0%
CAGTTAGAAAGACACAGCAG+CGG - chr3_3:86891940-86891959 None:intergenic 45.0%
AGAAGTGGCATAACATGTGC+AGG - chr3_3:86891986-86892005 None:intergenic 45.0%
! TGCACATGTTATGCCACTTC+TGG + chr3_3:86891985-86892004 Msa0481130:CDS 45.0%
GTACGTACAATCTCCAGAAG+TGG - chr3_3:86892001-86892020 None:intergenic 45.0%
TGGAGATTGTACGTACCAAG+CGG + chr3_3:86892005-86892024 Msa0481130:CDS 45.0%
GATAAAGAAAACTCCGGTGG+TGG + chr3_3:86892072-86892091 Msa0481130:CDS 45.0%
! ACTCTCTTGCTTGTTGAACG+TGG + chr3_3:86892151-86892170 Msa0481130:CDS 45.0%
! CCAAATTTGGAATGCCCATG+GGG + chr3_3:86892206-86892225 Msa0481130:CDS 45.0%
ACCTTTCAGGAAGTAGCTGT+GGG - chr3_3:86892268-86892287 None:intergenic 45.0%
TGCAGATTGTGTGACCTTGT+TGG + chr3_3:86892311-86892330 Msa0481130:intron 45.0%
! GTTCTGAACAAATTGGGAGC+CGG - chr3_3:86892357-86892376 None:intergenic 45.0%
! GCTTATCCCTCTTTTGCAAG+AGG + chr3_3:86892403-86892422 Msa0481130:CDS 45.0%
ACAGGCGAAACAACTCGAAA+AGG + chr3_3:86892563-86892582 Msa0481130:intron 45.0%
CTTTAATTCAGGGTCAGGAC+TGG - chr3_3:86892618-86892637 None:intergenic 45.0%
!! GAGAAAGCTAGGAGCATTTC+CGG + chr3_3:86892647-86892666 Msa0481130:CDS 45.0%
CTTCTTTCCTGTGGTGAATG+AGG + chr3_3:86892854-86892873 Msa0481130:CDS 45.0%
!! GAATGGGTTTTCCACCTTAC+AGG + chr3_3:86892943-86892962 Msa0481130:CDS 45.0%
!! CAGGGGAGGTATCATATTCT+GGG + chr3_3:86893038-86893057 Msa0481130:intron 45.0%
TAGGCACAAGGCTTGAAGAA+CGG - chr3_3:86893126-86893145 None:intergenic 45.0%
AATTAGGATCTCCCAATGGG+TGG + chr3_3:86893846-86893865 Msa0481130:intron 45.0%
ATTAGGATCTCCCAATGGGT+GGG + chr3_3:86893847-86893866 Msa0481130:intron 45.0%
AACGGTCTGTTGCTCTCTAA+TGG + chr3_3:86894257-86894276 Msa0481130:intron 45.0%
! TTGACTGCAGCAGATTTGCT+TGG + chr3_3:86894459-86894478 Msa0481130:three_prime_UTR 45.0%
GTTTCTTCACTTACAGCCCT+TGG + chr3_3:86894516-86894535 Msa0481130:three_prime_UTR 45.0%
CAAGTAGCAAGATGAGTTGC+AGG + chr3_3:86894717-86894736 Msa0481130:three_prime_UTR 45.0%
AGGTTGTACCTTGTAAGGCA+CGG - chr3_3:86894971-86894990 None:intergenic 45.0%
CTGAAAACTGTTGTCAGGGT+TGG + chr3_3:86895037-86895056 Msa0481130:three_prime_UTR 45.0%
AACTGTTGTCAGGGTTGGAT+TGG + chr3_3:86895042-86895061 Msa0481130:three_prime_UTR 45.0%
ACTGTTGTCAGGGTTGGATT+GGG + chr3_3:86895043-86895062 Msa0481130:three_prime_UTR 45.0%
! GAGTAGCAGAAAAGGGCACA+CGG + chr3_3:86886740-86886759 Msa0481130:CDS 50.0%
GGGCACACGGTTATGAATGT+TGG + chr3_3:86886753-86886772 Msa0481130:CDS 50.0%
AAGGAGAGAGAATTGACGGG+AGG - chr3_3:86886813-86886832 None:intergenic 50.0%
! ATCATCCATCTGTGTCGCTG+AGG + chr3_3:86886921-86886940 Msa0481130:intron 50.0%
TTTCACCTCAGCGACACAGA+TGG - chr3_3:86886929-86886948 None:intergenic 50.0%
TGGATGGCGATTGACAACAG+AGG + chr3_3:86887613-86887632 Msa0481130:intron 50.0%
TCACGGCATACTGCGGTATT+TGG - chr3_3:86887821-86887840 None:intergenic 50.0%
TGTGGTTTCACGGCATACTG+CGG - chr3_3:86887828-86887847 None:intergenic 50.0%
! CATACAGAGCGTCCAAAACC+TGG + chr3_3:86888419-86888438 Msa0481130:intron 50.0%
CCATCAATGGCAGCAACTGA+GGG - chr3_3:86888574-86888593 None:intergenic 50.0%
TGGGGGCTTAGAAGTTGCAA+TGG + chr3_3:86888606-86888625 Msa0481130:CDS 50.0%
GTCTGCCTGAACTTCAGCTT+GGG + chr3_3:86888747-86888766 Msa0481130:CDS 50.0%
TGGTATCAAGCCATCACCTC+AGG - chr3_3:86889262-86889281 None:intergenic 50.0%
AGGACATCCACTGCTACTCA+TGG - chr3_3:86889348-86889367 None:intergenic 50.0%
GAGTAGCAGTGGATGTCCTA+TGG + chr3_3:86889349-86889368 Msa0481130:intron 50.0%
GCCAAGTCCAACCACGAAAT+TGG - chr3_3:86889577-86889596 None:intergenic 50.0%
TTCGGGGCTTGTAGATGGTT+TGG + chr3_3:86889822-86889841 Msa0481130:CDS 50.0%
GTCGACGGTCCAAAATATCC+AGG - chr3_3:86889888-86889907 None:intergenic 50.0%
TGGTAATCCATGGTCGTCGA+CGG - chr3_3:86889903-86889922 None:intergenic 50.0%
! ATCTCTCTAGCTTCCCCAAG+TGG - chr3_3:86889952-86889971 None:intergenic 50.0%
!! GGGAGCTTGTTTTCGAGCTT+GGG - chr3_3:86889992-86890011 None:intergenic 50.0%
!! TGGGAGCTTGTTTTCGAGCT+TGG - chr3_3:86889993-86890012 None:intergenic 50.0%
TCCCAATCTCAAGCATCCTC+TGG + chr3_3:86890008-86890027 Msa0481130:CDS 50.0%
TAACCTTCCAGAGACCAGCA+CGG - chr3_3:86890074-86890093 None:intergenic 50.0%
!! ACCAGAAGCACTTTGTGGTC+AGG - chr3_3:86890523-86890542 None:intergenic 50.0%
! TGACCACAAAGTGCTTCTGG+TGG + chr3_3:86890522-86890541 Msa0481130:intron 50.0%
AATCCCTGCACTGCAGGTAA+AGG + chr3_3:86890551-86890570 Msa0481130:intron 50.0%
TGACCTTTACCTGCAGTGCA+GGG - chr3_3:86890557-86890576 None:intergenic 50.0%
CTTGGGGCTATAAAACCAGG+TGG + chr3_3:86890738-86890757 Msa0481130:intron 50.0%
ATGGTTGCAATGCTTAGGCC+TGG + chr3_3:86890957-86890976 Msa0481130:intron 50.0%
TGCTTAGGCCTGGTGTGAAT+AGG + chr3_3:86890967-86890986 Msa0481130:intron 50.0%
GGTTCCAAGATCCGTGAAGA+AGG + chr3_3:86891236-86891255 Msa0481130:CDS 50.0%
GCAACCTTCTTCACGGATCT+TGG - chr3_3:86891243-86891262 None:intergenic 50.0%
GTGAAGAAGGTTGCCATCCT+TGG + chr3_3:86891249-86891268 Msa0481130:CDS 50.0%
AAGAAGGTTGCCATCCTTGG+TGG + chr3_3:86891252-86891271 Msa0481130:CDS 50.0%
CATTAGTCCTCCACCAAGGA+TGG - chr3_3:86891265-86891284 None:intergenic 50.0%
CATCCTTGGTGGAGGACTAA+TGG + chr3_3:86891263-86891282 Msa0481130:CDS 50.0%
TTGGAGCCCATTTCTTCAGG+TGG + chr3_3:86891888-86891907 Msa0481130:intron 50.0%
TACTTGAGGAGATGTCCGCT+TGG - chr3_3:86892023-86892042 None:intergenic 50.0%
! AAGAAAACTCCGGTGGTGGT+TGG + chr3_3:86892076-86892095 Msa0481130:CDS 50.0%
GTACAGTTTCCAACCACCAC+CGG - chr3_3:86892088-86892107 None:intergenic 50.0%
GTGGTGGTTGGAAACTGTAC+AGG + chr3_3:86892088-86892107 Msa0481130:CDS 50.0%
CCCCATGGGCATTCCAAATT+TGG - chr3_3:86892209-86892228 None:intergenic 50.0%
ACCCACAGCTACTTCCTGAA+AGG + chr3_3:86892264-86892283 Msa0481130:intron 50.0%
GACCTTTCAGGAAGTAGCTG+TGG - chr3_3:86892269-86892288 None:intergenic 50.0%
!! TGACCTTGTTGGTTTCGGTG+TGG + chr3_3:86892322-86892341 Msa0481130:CDS 50.0%
TTGCAAGAGGATAAGAGGGC+TGG + chr3_3:86892416-86892435 Msa0481130:CDS 50.0%
CATTGGATCAACGGAGACAC+CGG - chr3_3:86892669-86892688 None:intergenic 50.0%
CAGATCCACAGCATCAGATC+CGG - chr3_3:86892785-86892804 None:intergenic 50.0%
TCCACCTTACAGGTTTGTCC+TGG + chr3_3:86892953-86892972 Msa0481130:intron 50.0%
TCCAGGACAAACCTGTAAGG+TGG - chr3_3:86892957-86892976 None:intergenic 50.0%
GGATTGAAATTCTCCAGGGG+AGG + chr3_3:86893024-86893043 Msa0481130:intron 50.0%
CCAGAATATGATACCTCCCC+TGG - chr3_3:86893040-86893059 None:intergenic 50.0%
!! CCAGGGGAGGTATCATATTC+TGG + chr3_3:86893037-86893056 Msa0481130:intron 50.0%
! ATATTCTGGGCCGACTCTCT+TGG + chr3_3:86893051-86893070 Msa0481130:CDS 50.0%
! CTTCAAGCCTTGTGCCTACT+TGG + chr3_3:86893128-86893147 Msa0481130:CDS 50.0%
AGCTGCGAAAGGAATTCCTC+TGG + chr3_3:86893158-86893177 Msa0481130:CDS 50.0%
GCGGATCTTGCTAGAGTGAT+AGG + chr3_3:86893313-86893332 Msa0481130:intron 50.0%
! CAGTGAAGTGTCTTGTCGGT+CGG - chr3_3:86893387-86893406 None:intergenic 50.0%
TTAGGATCTCCCAATGGGTG+GGG + chr3_3:86893848-86893867 Msa0481130:intron 50.0%
TTTATCCCTCGAAGGGTCGA+AGG - chr3_3:86893919-86893938 None:intergenic 50.0%
TTTATTGCAGGGAGCCTCAG+TGG + chr3_3:86894291-86894310 Msa0481130:intron 50.0%
!! TGACTTAGCTTGCTCCACTG+AGG - chr3_3:86894308-86894327 None:intergenic 50.0%
CAGTGGAGCAAGCTAAGTCA+CGG + chr3_3:86894308-86894327 Msa0481130:CDS 50.0%
GCAAGCTAAGTCACGGATGT+AGG + chr3_3:86894315-86894334 Msa0481130:CDS 50.0%
AATGCTAGCCGTGCCTTACA+AGG + chr3_3:86894960-86894979 Msa0481130:three_prime_UTR 50.0%
CCCTCAGTTGCTGCCATTGA+TGG + chr3_3:86888571-86888590 Msa0481130:CDS 55.0%
GCCATCAATGGCAGCAACTG+AGG - chr3_3:86888575-86888594 None:intergenic 55.0%
! TGCCATTGATGGCCTTGCCT+TGG + chr3_3:86888582-86888601 Msa0481130:CDS 55.0%
! GCCATTGATGGCCTTGCCTT+GGG + chr3_3:86888583-86888602 Msa0481130:CDS 55.0%
ACCCAAGGCAAGGCCATCAA+TGG - chr3_3:86888587-86888606 None:intergenic 55.0%
! ATTGATGGCCTTGCCTTGGG+TGG + chr3_3:86888586-86888605 Msa0481130:CDS 55.0%
! TTGATGGCCTTGCCTTGGGT+GGG + chr3_3:86888587-86888606 Msa0481130:CDS 55.0%
AACTTCTAAGCCCCCACCCA+AGG - chr3_3:86888602-86888621 None:intergenic 55.0%
GGTCTGCCTGAACTTCAGCT+TGG + chr3_3:86888746-86888765 Msa0481130:CDS 55.0%
GTTGAATGACTGGGTCACCG+AGG + chr3_3:86889164-86889183 Msa0481130:intron 55.0%
CAGCGACTTCCTCGTCTTGT+TGG + chr3_3:86889442-86889461 Msa0481130:CDS 55.0%
TGATGAACACTGCACGCCAG+TGG + chr3_3:86889860-86889879 Msa0481130:CDS 55.0%
GATGAACACTGCACGCCAGT+GGG + chr3_3:86889861-86889880 Msa0481130:CDS 55.0%
CCAAAATATCCAGGGCCCAC+TGG - chr3_3:86889879-86889898 None:intergenic 55.0%
! CCAGTGGGCCCTGGATATTT+TGG + chr3_3:86889876-86889895 Msa0481130:CDS 55.0%
! TTTTGGACCGTCGACGACCA+TGG + chr3_3:86889893-86889912 Msa0481130:CDS 55.0%
AACCTTCCAGAGACCAGCAC+GGG - chr3_3:86890073-86890092 None:intergenic 55.0%
AGTTCCACAGTCAACAGGGG+TGG - chr3_3:86890475-86890494 None:intergenic 55.0%
! GCCTGACCACAAAGTGCTTC+TGG + chr3_3:86890519-86890538 Msa0481130:intron 55.0%
GTGACCTTTACCTGCAGTGC+AGG - chr3_3:86890558-86890577 None:intergenic 55.0%
ATTGTGCTCCACAGGGGCTA+GGG - chr3_3:86890581-86890600 None:intergenic 55.0%
AATTGTGCTCCACAGGGGCT+AGG - chr3_3:86890582-86890601 None:intergenic 55.0%
! TCTTGGCTTGAACAGGTGCC+TGG + chr3_3:86891195-86891214 Msa0481130:intron 55.0%
! CTTGGCTTGAACAGGTGCCT+GGG + chr3_3:86891196-86891215 Msa0481130:intron 55.0%
! TTGGCTTGAACAGGTGCCTG+GGG + chr3_3:86891197-86891216 Msa0481130:intron 55.0%
AGACCACGATCAGTAACCCC+AGG - chr3_3:86891216-86891235 None:intergenic 55.0%
TGGGGTTACTGATCGTGGTC+TGG + chr3_3:86891215-86891234 Msa0481130:CDS 55.0%
AAGGTTGCCATCCTTGGTGG+AGG + chr3_3:86891255-86891274 Msa0481130:CDS 55.0%
AGCCCATTAGTCCTCCACCA+AGG - chr3_3:86891269-86891288 None:intergenic 55.0%
GAATGCCCATGGGGCCTTTA+AGG + chr3_3:86892215-86892234 Msa0481130:CDS 55.0%
!! CCTTGTTGGTTTCGGTGTGG+CGG + chr3_3:86892325-86892344 Msa0481130:CDS 55.0%
CGGTGTCTCCGTTGATCCAA+TGG + chr3_3:86892667-86892686 Msa0481130:CDS 55.0%
TTCCACCGGATCTGATGCTG+TGG + chr3_3:86892777-86892796 Msa0481130:intron 55.0%
ATCCACAGCATCAGATCCGG+TGG - chr3_3:86892782-86892801 None:intergenic 55.0%
CGACAAGCCTCATTCACCAC+AGG - chr3_3:86892864-86892883 None:intergenic 55.0%
GCTTGTCGTGTCCTCGATGA+AGG + chr3_3:86892876-86892895 Msa0481130:CDS 55.0%
CTTGCAGCCAAGTAGGCACA+AGG - chr3_3:86893138-86893157 None:intergenic 55.0%
TTGGCTGCAAGAGCTGCGAA+AGG + chr3_3:86893147-86893166 Msa0481130:CDS 55.0%
! CAATTGGTCACTGGCTGGGT+AGG + chr3_3:86893263-86893282 Msa0481130:intron 55.0%
TACATGCCTTCGACCCTTCG+AGG + chr3_3:86893910-86893929 Msa0481130:intron 55.0%
ACATGCCTTCGACCCTTCGA+GGG + chr3_3:86893911-86893930 Msa0481130:intron 55.0%
AGTGGTCTGCAGCAATGCAC+CGG - chr3_3:86894672-86894691 None:intergenic 55.0%
!! TGTGGCGGGTGAAGCTATGA+TGG - chr3_3:86895012-86895031 None:intergenic 55.0%
! CAGAGCGTCCAAAACCTGGG+TGG + chr3_3:86888423-86888442 Msa0481130:intron 60.0%
! TGATGGCCTTGCCTTGGGTG+GGG + chr3_3:86888588-86888607 Msa0481130:CDS 60.0%
ATAGTGTCTGGTCCCCGTGC+TGG + chr3_3:86890057-86890076 Msa0481130:CDS 60.0%
ACCTTCCAGAGACCAGCACG+GGG - chr3_3:86890072-86890091 None:intergenic 60.0%
CCACAGTCAACAGGGGTGGT+GGG - chr3_3:86890471-86890490 None:intergenic 60.0%
TCCACAGTCAACAGGGGTGG+TGG - chr3_3:86890472-86890491 None:intergenic 60.0%
TTGTGCTCCACAGGGGCTAG+GGG - chr3_3:86890580-86890599 None:intergenic 60.0%
GTGCCTGGGGTTACTGATCG+TGG + chr3_3:86891210-86891229 Msa0481130:CDS 60.0%
!! GGTGGAGGACTAATGGGCTC+TGG + chr3_3:86891270-86891289 Msa0481130:CDS 60.0%
CCGCCACACCGAAACCAACA+AGG - chr3_3:86892328-86892347 None:intergenic 60.0%
! TTCGGTGTGGCGGTTGCAAC+CGG + chr3_3:86892335-86892354 Msa0481130:CDS 60.0%
CGCAGCTCTTGCAGCCAAGT+AGG - chr3_3:86893145-86893164 None:intergenic 60.0%
GATCTCCCAATGGGTGGGGT+GGG + chr3_3:86893852-86893871 Msa0481130:intron 60.0%
ATCTCCCAATGGGTGGGGTG+GGG + chr3_3:86893853-86893872 Msa0481130:intron 60.0%
! GATGGCCTTGCCTTGGGTGG+GGG + chr3_3:86888589-86888608 Msa0481130:CDS 65.0%
CTAAGCCCCCACCCAAGGCA+AGG - chr3_3:86888597-86888616 None:intergenic 65.0%
! TCCCCGTGCTGGTCTCTGGA+AGG + chr3_3:86890068-86890087 Msa0481130:CDS 65.0%
! CCCACCACCCCTGTTGACTG+TGG + chr3_3:86890468-86890487 Msa0481130:intron 65.0%
AAGGTCACCCCTAGCCCCTG+TGG + chr3_3:86890570-86890589 Msa0481130:intron 65.0%
GGATCTCCCAATGGGTGGGG+TGG + chr3_3:86893851-86893870 Msa0481130:intron 65.0%
GATGCCCCACCCCACCCATT+GGG - chr3_3:86893860-86893879 None:intergenic 65.0%
AGATGCCCCACCCCACCCAT+TGG - chr3_3:86893861-86893880 None:intergenic 65.0%
! CTGGTCCCCGTGCTGGTCTC+TGG + chr3_3:86890064-86890083 Msa0481130:CDS 70.0%
CACTGCACGCCAGTGGGCCC+TGG + chr3_3:86889867-86889886 Msa0481130:CDS 75.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 86886585 86895066 86886585 ID=Msa0481130;Name=Msa0481130
chr3_3 mRNA 86886585 86895066 86886585 ID=Msa0481130-mRNA-1;Parent=Msa0481130;Name=Msa0481130-mRNA-1;_AED=0.09;_eAED=0.09;_QI=153|1|1|1|0.94|0.89|19|606|723
chr3_3 exon 86886585 86886837 86886585 ID=Msa0481130-mRNA-1:exon:25130;Parent=Msa0481130-mRNA-1
chr3_3 exon 86887958 86888029 86887958 ID=Msa0481130-mRNA-1:exon:25131;Parent=Msa0481130-mRNA-1
chr3_3 exon 86888277 86888342 86888277 ID=Msa0481130-mRNA-1:exon:25132;Parent=Msa0481130-mRNA-1
chr3_3 exon 86888426 86888479 86888426 ID=Msa0481130-mRNA-1:exon:25133;Parent=Msa0481130-mRNA-1
chr3_3 exon 86888560 86888627 86888560 ID=Msa0481130-mRNA-1:exon:25134;Parent=Msa0481130-mRNA-1
chr3_3 exon 86888707 86888788 86888707 ID=Msa0481130-mRNA-1:exon:25135;Parent=Msa0481130-mRNA-1
chr3_3 exon 86889437 86889492 86889437 ID=Msa0481130-mRNA-1:exon:25136;Parent=Msa0481130-mRNA-1
chr3_3 exon 86889787 86890089 86889787 ID=Msa0481130-mRNA-1:exon:25137;Parent=Msa0481130-mRNA-1
chr3_3 exon 86890172 86890258 86890172 ID=Msa0481130-mRNA-1:exon:25138;Parent=Msa0481130-mRNA-1
chr3_3 exon 86891210 86891384 86891210 ID=Msa0481130-mRNA-1:exon:25139;Parent=Msa0481130-mRNA-1
chr3_3 exon 86891494 86891615 86891494 ID=Msa0481130-mRNA-1:exon:25140;Parent=Msa0481130-mRNA-1
chr3_3 exon 86891743 86891906 86891743 ID=Msa0481130-mRNA-1:exon:25141;Parent=Msa0481130-mRNA-1
chr3_3 exon 86891982 86892236 86891982 ID=Msa0481130-mRNA-1:exon:25142;Parent=Msa0481130-mRNA-1
chr3_3 exon 86892316 86892437 86892316 ID=Msa0481130-mRNA-1:exon:25143;Parent=Msa0481130-mRNA-1
chr3_3 exon 86892567 86892688 86892567 ID=Msa0481130-mRNA-1:exon:25144;Parent=Msa0481130-mRNA-1
chr3_3 exon 86892816 86892964 86892816 ID=Msa0481130-mRNA-1:exon:25145;Parent=Msa0481130-mRNA-1
chr3_3 exon 86893041 86893179 86893041 ID=Msa0481130-mRNA-1:exon:25146;Parent=Msa0481130-mRNA-1
chr3_3 exon 86894301 86894757 86894301 ID=Msa0481130-mRNA-1:exon:25147;Parent=Msa0481130-mRNA-1
chr3_3 exon 86894882 86895066 86894882 ID=Msa0481130-mRNA-1:exon:25148;Parent=Msa0481130-mRNA-1
chr3_3 five_prime_UTR 86886585 86886737 86886585 ID=Msa0481130-mRNA-1:five_prime_utr;Parent=Msa0481130-mRNA-1
chr3_3 CDS 86886738 86886837 86886738 ID=Msa0481130-mRNA-1:cds;Parent=Msa0481130-mRNA-1
chr3_3 CDS 86887958 86888029 86887958 ID=Msa0481130-mRNA-1:cds;Parent=Msa0481130-mRNA-1
chr3_3 CDS 86888277 86888342 86888277 ID=Msa0481130-mRNA-1:cds;Parent=Msa0481130-mRNA-1
chr3_3 CDS 86888426 86888479 86888426 ID=Msa0481130-mRNA-1:cds;Parent=Msa0481130-mRNA-1
chr3_3 CDS 86888560 86888627 86888560 ID=Msa0481130-mRNA-1:cds;Parent=Msa0481130-mRNA-1
chr3_3 CDS 86888707 86888788 86888707 ID=Msa0481130-mRNA-1:cds;Parent=Msa0481130-mRNA-1
chr3_3 CDS 86889437 86889492 86889437 ID=Msa0481130-mRNA-1:cds;Parent=Msa0481130-mRNA-1
chr3_3 CDS 86889787 86890089 86889787 ID=Msa0481130-mRNA-1:cds;Parent=Msa0481130-mRNA-1
chr3_3 CDS 86890172 86890258 86890172 ID=Msa0481130-mRNA-1:cds;Parent=Msa0481130-mRNA-1
chr3_3 CDS 86891210 86891384 86891210 ID=Msa0481130-mRNA-1:cds;Parent=Msa0481130-mRNA-1
chr3_3 CDS 86891494 86891615 86891494 ID=Msa0481130-mRNA-1:cds;Parent=Msa0481130-mRNA-1
chr3_3 CDS 86891743 86891906 86891743 ID=Msa0481130-mRNA-1:cds;Parent=Msa0481130-mRNA-1
chr3_3 CDS 86891982 86892236 86891982 ID=Msa0481130-mRNA-1:cds;Parent=Msa0481130-mRNA-1
chr3_3 CDS 86892316 86892437 86892316 ID=Msa0481130-mRNA-1:cds;Parent=Msa0481130-mRNA-1
chr3_3 CDS 86892567 86892688 86892567 ID=Msa0481130-mRNA-1:cds;Parent=Msa0481130-mRNA-1
chr3_3 CDS 86892816 86892964 86892816 ID=Msa0481130-mRNA-1:cds;Parent=Msa0481130-mRNA-1
chr3_3 CDS 86893041 86893179 86893041 ID=Msa0481130-mRNA-1:cds;Parent=Msa0481130-mRNA-1
chr3_3 CDS 86894301 86894336 86894301 ID=Msa0481130-mRNA-1:cds;Parent=Msa0481130-mRNA-1
chr3_3 three_prime_UTR 86894337 86894757 86894337 ID=Msa0481130-mRNA-1:three_prime_utr;Parent=Msa0481130-mRNA-1
chr3_3 three_prime_UTR 86894882 86895066 86894882 ID=Msa0481130-mRNA-1:three_prime_utr;Parent=Msa0481130-mRNA-1
Gene Sequence

>Msa0481130

ATGAGTAGCAGAAAAGGGCACACGGTTATGAATGTTGGAGCTGATGGAGTTGCCATCATCACCATCATCAATCCTCCCGTCAATTCTCTCTCCTTTGATGTATTGCGAAGTTTAAAGGAGAGTTTTGATCAGGCTATACAAAGAGATGACGTCAAGGCAATTGTTGTTACAGGTGCAAAGGGAAAATTTTCTGGAGGTTTTGATATTTCTGCATTTGGTGGTCTTCAAGAGTCAAAAGAGCGTCCAAAACCTGGGTGGATATCGATTGAAATCATCACTGATACAATAGAAGCGGCAAAGAAACCCTCAGTTGCTGCCATTGATGGCCTTGCCTTGGGTGGGGGCTTAGAAGTTGCAATGGCATGCAACGCACGATTATCAACTGCAACTGCTCAACTAGGTCTGCCTGAACTTCAGCTTGGGATAATTCCTGGATTTGGAGGAACACAGCGACTTCCTCGTCTTGTTGGTCTGACAAAGGCACTTGAAATGATGTTGACTTCCAAGCCAGTGAAAGGAAAGGATGCTTTTAGTTCGGGGCTTGTAGATGGTTTGGTGTCACCTGATCAGTTGATGAACACTGCACGCCAGTGGGCCCTGGATATTTTGGACCGTCGACGACCATGGATTACCAGTCTTTTCAAGACTGAAAAAATAGAACCACTTGGGGAAGCTAGAGAGATTTTGAAATTCGCACGTGCCCAAGCTCGAAAACAAGCTCCCAATCTCAAGCATCCTCTGGTTTGCATTGATGTTATTGAAGCAGGAATAGTGTCTGGTCCCCGTGCTGGTCTCTGGAAGGAAGCTGAAGCATTTGATGCACTGGTACAATCAGATACTTGCAAAAGCTTAATTCACATATTTTTTGCTCAAAGAGGAACATCTAAGGTGCCTGGGGTTACTGATCGTGGTCTGGTTCCAAGATCCGTGAAGAAGGTTGCCATCCTTGGTGGAGGACTAATGGGCTCTGGAATAGCAACAGCTTTAATACTTAGTAATTATTCTGTCATATTGAAAGAAGTAAATGAAAAATTCTTGGATGCTGGTATCAATAGGATTAAAGCAAACCTACAGAGCCGTGTTAAGAAAGGTAATTTAACCCAGGAAAAATTTGAAAAGGCATTCTCTCTTGTCAAAGGTTCCCTCGACTATGATAGCTTCAGAGATGTAGACATGGTGATAGAGGCTGTTATTGAGAATGTTTCCTTGAAGCAACAAATCTTTGCTGATCTTGAAAAGTACTGTCCACCTCATTGTATACTTGGTAGTAACACTTCCACAATTGACTTGGACCTGATCGGAGAAAAGACCAAGTCTCAAGATCGAATTATTGGAGCCCATTTCTTCAGTCCTGCACATGTTATGCCACTTCTGGAGATTGTACGTACCAAGCGGACATCTCCTCAAGTAATAGTTGACTTGTTAGATATTTCAAAGAAGATAAAGAAAACTCCGGTGGTGGTTGGAAACTGTACAGGATTTGCTGTTAATAGGGTGTTCTTCCCATATACACAAGCAACTCTCTTGCTTGTTGAACGTGGCGCAGATGTTTACCAAATTGATAAAGCAGTAACCAAATTTGGAATGCCCATGGGGCCTTTAAGATTGTGTGACCTTGTTGGTTTCGGTGTGGCGGTTGCAACCGGCTCCCAATTTGTTCAGAACTTTCCTGAGCGAACTTATAAATCAATGCTTATCCCTCTTTTGCAAGAGGATAAGAGGGCTGGCGAAACAACTCGAAAAGGCTTTTATTTGTATGATGATAGACGCAAGGCCAGTCCTGACCCTGAATTAAAGAAATTTATTGAGAAAGCTAGGAGCATTTCCGGTGTCTCCGTTGATCCAATGCTTGTCAAGTTACAAGAGAAGGACATCATTGAGATGATCTTCTTTCCTGTGGTGAATGAGGCTTGTCGTGTCCTCGATGAAGGTATTGTAGTCAAAGCAGCAGATCTTGATATTGCTGCTATCATGGGAATGGGTTTTCCACCTTACAGGGGAGGTATCATATTCTGGGCCGACTCTCTTGGATCTAAATACATATATTCAAGATTGGAGAAATGGTCAGAGTTGTATGGACCGTTCTTCAAGCCTTGTGCCTACTTGGCTGCAAGAGCTGCGAAAGGAATTCCTCTGGGAGCCTCAGTGGAGCAAGCTAAGTCACGGATGTAG
Protein sequence

>Msa0481130

MSSRKGHTVMNVGADGVAIITIINPPVNSLSFDVLRSLKESFDQAIQRDDVKAIVVTGAKGKFSGGFDISAFGGLQESKERPKPGWISIEIITDTIEAAKKPSVAAIDGLALGGGLEVAMACNARLSTATAQLGLPELQLGIIPGFGGTQRLPRLVGLTKALEMMLTSKPVKGKDAFSSGLVDGLVSPDQLMNTARQWALDILDRRRPWITSLFKTEKIEPLGEAREILKFARAQARKQAPNLKHPLVCIDVIEAGIVSGPRAGLWKEAEAFDALVQSDTCKSLIHIFFAQRGTSKVPGVTDRGLVPRSVKKVAILGGGLMGSGIATALILSNYSVILKEVNEKFLDAGINRIKANLQSRVKKGNLTQEKFEKAFSLVKGSLDYDSFRDVDMVIEAVIENVSLKQQIFADLEKYCPPHCILGSNTSTIDLDLIGEKTKSQDRIIGAHFFSPAHVMPLLEIVRTKRTSPQVIVDLLDISKKIKKTPVVVGNCTGFAVNRVFFPYTQATLLLVERGADVYQIDKAVTKFGMPMGPLRLCDLVGFGVAVATGSQFVQNFPERTYKSMLIPLLQEDKRAGETTRKGFYLYDDRRKASPDPELKKFIEKARSISGVSVDPMLVKLQEKDIIEMIFFPVVNEACRVLDEGIVVKAADLDIAAIMGMGFPPYRGGIIFWADSLGSKYIYSRLEKWSELYGPFFKPCAYLAARAAKGIPLGASVEQAKSRM*