AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1217920

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1217920 MtrunA17_Chr4g0067521 98.617 723 10 0 1 723 1 723 0.0 1454
Msa1217920 MtrunA17_Chr2g0295671 82.058 719 129 0 5 723 3 721 0.0 1217
Msa1217920 MtrunA17_Chr6g0485841 58.748 703 288 1 12 714 10 710 0.0 843
Msa1217920 MtrunA17_Chr8g0360311 31.560 282 186 5 310 587 4 282 8.70e-33 128
Msa1217920 MtrunA17_Chr4g0055741 35.714 196 117 5 12 202 48 239 9.81e-25 105
Msa1217920 MtrunA17_Chr4g0068451 30.244 205 126 4 1 199 1 194 3.15e-20 91.3
Msa1217920 MtrunA17_Chr3g0122861 29.341 167 111 2 23 182 24 190 3.66e-17 82.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1217920 AT3G06860.1 76.552 725 168 2 1 723 1 725 0.0 1146
Msa1217920 AT4G29010.1 56.033 721 316 1 3 723 2 721 0.0 823
Msa1217920 AT3G15290.1 29.210 291 198 4 310 594 4 292 4.56e-33 129
Msa1217920 AT3G15290.2 28.936 235 159 4 366 594 1 233 6.30e-25 104
Msa1217920 AT4G16800.1 33.673 196 125 3 13 205 50 243 4.71e-24 103
Msa1217920 AT5G43280.2 29.897 194 124 2 1 182 3 196 4.15e-20 90.1
Msa1217920 AT5G43280.1 29.897 194 124 2 1 182 3 196 1.69e-19 89.7
Msa1217920 AT4G16210.1 27.861 201 129 3 16 210 18 208 5.30e-18 85.1

Find 237 sgRNAs with CRISPR-Local

Find 578 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCCATGGGCATTCCAAATT+TGG 0.114974 8_1:+80455632 None:intergenic
CAACTATATTCTTAGGATTT+TGG 0.126989 8_1:+80453443 None:intergenic
AGCATTCCTATTTGTATTTA+AGG 0.128020 8_1:+80452895 None:intergenic
GAATGCCCATGGGGCCTTTA+AGG 0.140153 8_1:-80455623 Msa1217920:intron
CAACTCAATACTTCCATTAT+TGG 0.171090 8_1:+80453278 None:intergenic
TCAATAAATTTCTTTAATTC+AGG 0.174035 8_1:+80455212 None:intergenic
CCAGGGGAGGTATCATATTC+TGG 0.190853 8_1:-80454801 Msa1217920:intron
GATAAAGCAGTAACCAAATT+TGG 0.192717 8_1:-80455645 Msa1217920:CDS
TGGTTACTGCTTTATCAATT+TGG 0.207310 8_1:+80455652 None:intergenic
GCCAGTATTGCGAAGTTTAA+AGG 0.207390 8_1:-80459885 Msa1217920:intron
CATTTAATTCACAGGTTTAA+TGG 0.225711 8_1:+80452932 None:intergenic
AAGAGAGTTGCTTGTGTATA+TGG 0.227919 8_1:+80455702 None:intergenic
GTACAGGATTTGCTGTTAAT+AGG 0.230122 8_1:-80455734 Msa1217920:CDS
GAGTTGTTGGTTTAAATAAA+TGG 0.231120 8_1:-80453261 Msa1217920:three_prime_UTR
ATCGATATCCACCCAGGTTT+TGG 0.234196 8_1:+80459407 None:intergenic
TCCAGGCATTAATACCTTAA+AGG 0.237602 8_1:+80455609 None:intergenic
CCAGTGGGCCCTGGATATTT+TGG 0.256172 8_1:-80457962 Msa1217920:CDS
TCTTGGCTTGAACAGGTGCC+TGG 0.259592 8_1:-80456643 Msa1217920:intron
CAAGTTTCAACTATATTCTT+AGG 0.271833 8_1:+80453436 None:intergenic
GAGAAAGCTAGGAGCATTTC+CGG 0.273477 8_1:-80455191 Msa1217920:CDS
CCCTCAGTTGCTGCCATTGA+TGG 0.284270 8_1:-80459267 Msa1217920:CDS
GCAACCTTCTTCACGGATCT+TGG 0.292427 8_1:+80456598 None:intergenic
TAAGAGCCTTAAATACAAAT+AGG 0.292492 8_1:-80452901 Msa1217920:three_prime_UTR
GTCAATTCTCTCTCCTTTGA+TGG 0.298949 8_1:-80461022 Msa1217920:intron
CTTGGGATAATTCCTGGATT+TGG 0.300048 8_1:-80459074 Msa1217920:CDS
CAGGAAAGTTCTGAACAAAT+TGG 0.300099 8_1:+80455477 None:intergenic
TGATGGCCTTGCCTTGGGTG+GGG 0.300495 8_1:-80459250 Msa1217920:CDS
AAGTCTCAAGATCGAATTAT+TGG 0.302329 8_1:-80455969 Msa1217920:CDS
CTTCAGCTTGGGATAATTCC+TGG 0.319048 8_1:-80459080 Msa1217920:CDS
CTTCAAGCCTTGTGCCTACT+TGG 0.319905 8_1:-80454710 Msa1217920:CDS
GAGATTCAAGTTTGATTTGA+AGG 0.320170 8_1:+80461207 None:intergenic
GCCATTGATGGCCTTGCCTT+GGG 0.322408 8_1:-80459255 Msa1217920:CDS
CATCCTTGGTGGAGGACTAA+TGG 0.322786 8_1:-80456575 Msa1217920:CDS
GGTCGAAATAGAAGTACTTT+AGG 0.324409 8_1:-80453358 Msa1217920:three_prime_UTR
TGCACATGTTATGCCACTTC+TGG 0.325842 8_1:-80455853 Msa1217920:CDS
TTGATGGCCTTGCCTTGGGT+GGG 0.326894 8_1:-80459251 Msa1217920:CDS
GTCAAGGCAATTGTTGTTAC+AGG 0.328151 8_1:-80459830 Msa1217920:intron
ATTGACATTGCCATTATTAG+TGG 0.328275 8_1:+80453151 None:intergenic
GATGGCCTTGCCTTGGGTGG+GGG 0.328948 8_1:-80459249 Msa1217920:CDS
TGCCATTGATGGCCTTGCCT+TGG 0.329610 8_1:-80459256 Msa1217920:CDS
CAACCTGTTGAAGAATAATA+TGG 0.330541 8_1:-80452853 Msa1217920:three_prime_UTR
CAGGATACCACCTGAAGAAA+TGG 0.332736 8_1:+80455943 None:intergenic
GCTGGTATCAATAGGATTAA+AGG 0.333729 8_1:-80456475 Msa1217920:intron
CTGGTCCCCGTGCTGGTCTC+TGG 0.336045 8_1:-80457774 Msa1217920:CDS
TTTAGTTCGGGGCTTGTAGA+TGG 0.341760 8_1:-80458021 Msa1217920:CDS
TGCTCAAAGAGGAACATCTA+AGG 0.347542 8_1:-80457601 Msa1217920:intron
ATGTTTCCTCATAAGTTTAC+CGG 0.349164 8_1:-80453188 Msa1217920:three_prime_UTR
TTCGGTGTGGCGGTTGCAAC+CGG 0.356103 8_1:-80455503 Msa1217920:CDS
CAGGAATTGAGTTAATAATT+AGG 0.356419 8_1:-80453102 Msa1217920:intron
TTATTGGAGCCCATTTCTTC+AGG 0.358184 8_1:-80455953 Msa1217920:intron
TACAGGATTTGCTGTTAATA+GGG 0.362316 8_1:-80455733 Msa1217920:CDS
TCAACAGGTTGTACCTTGTA+AGG 0.366847 8_1:+80452865 None:intergenic
GGTCCATATTATTCTTCAAC+AGG 0.366887 8_1:+80452850 None:intergenic
ATCAAAATGAGTAGCAGAAA+AGG 0.369109 8_1:-80461106 Msa1217920:exon
TACTTTAGGATCAGCTATAC+AGG 0.369281 8_1:-80453344 Msa1217920:three_prime_UTR
TCTTGGATGCTGGTATCAAT+AGG 0.369714 8_1:-80456483 Msa1217920:CDS
CTTGGCTTGAACAGGTGCCT+GGG 0.374210 8_1:-80456642 Msa1217920:intron
TTGTGTGACCTTGTTGGTTT+CGG 0.374734 8_1:-80455521 Msa1217920:CDS
ATCCTTGGTGGAGGACTAAT+GGG 0.378446 8_1:-80456574 Msa1217920:CDS
CAAGTAGCAAGATGAGTTGC+AGG 0.384240 8_1:-80453121 Msa1217920:three_prime_UTR
TTCGGGGCTTGTAGATGGTT+TGG 0.385848 8_1:-80458016 Msa1217920:CDS
TATATTCAAGATTGGAGAAA+TGG 0.387378 8_1:-80454753 Msa1217920:CDS
CTTCTTTCCTGTGGTGAATG+AGG 0.388658 8_1:-80454984 Msa1217920:CDS
AATTCACAGGTTTAATGGTT+AGG 0.391141 8_1:+80452937 None:intergenic
CATACAGAGCGTCCAAAACC+TGG 0.393139 8_1:-80459419 Msa1217920:intron
ATTGATGGCCTTGCCTTGGG+TGG 0.400708 8_1:-80459252 Msa1217920:CDS
TTGCTGCAGACCACTAATAA+TGG 0.402509 8_1:-80453161 Msa1217920:three_prime_UTR
TGCATTGATGTTATTGAAGC+AGG 0.402878 8_1:-80457805 Msa1217920:CDS
CAATAAATTTCTTTAATTCA+GGG 0.403494 8_1:+80455213 None:intergenic
ATCTACTGAAAACTGTTGTC+AGG 0.403510 8_1:-80452806 Msa1217920:three_prime_UTR
CAGCGACTTCCTCGTCTTGT+TGG 0.407284 8_1:-80458396 Msa1217920:CDS
TCTTGATATTGCTGCTATCA+TGG 0.409564 8_1:-80454918 Msa1217920:CDS
AACCAGAGGATGCTTGAGAT+TGG 0.409821 8_1:+80457828 None:intergenic
ATCCTTTCCTTTCACTGGCT+TGG 0.411160 8_1:+80458047 None:intergenic
TAATGGAAGTATTGAGTTGT+TGG 0.411758 8_1:-80453274 Msa1217920:three_prime_UTR
ATATTCTGGGCCGACTCTCT+TGG 0.418222 8_1:-80454787 Msa1217920:CDS
AATTTCTTTAATTCAGGGTC+AGG 0.419341 8_1:+80455218 None:intergenic
AGCAAAGATTTGTTGCTTCA+AGG 0.419478 8_1:+80456076 None:intergenic
TGCAGATTGTGTGACCTTGT+TGG 0.420097 8_1:-80455527 Msa1217920:intron
AACTGTTGTCAGGGTTGGAT+TGG 0.420982 8_1:-80452796 Msa1217920:three_prime_UTR
CACTGCACGCCAGTGGGCCC+TGG 0.421188 8_1:-80457971 Msa1217920:CDS
TTTGATATTTCTGCATTTGG+TGG 0.438194 8_1:-80459535 Msa1217920:CDS
ATTATCCCAAGCTGAAGTTC+AGG 0.438901 8_1:+80459086 None:intergenic
CAGGGGAGGTATCATATTCT+GGG 0.442930 8_1:-80454800 Msa1217920:CDS
GTGAAGAAGGTTGCCATCCT+TGG 0.448024 8_1:-80456589 Msa1217920:CDS
CGGTGTCTCCGTTGATCCAA+TGG 0.449423 8_1:-80455171 Msa1217920:intron
AGAAATTTATTGAGAAAGCT+AGG 0.449622 8_1:-80455202 Msa1217920:CDS
ACTGTTGTCAGGGTTGGATT+GGG 0.450837 8_1:-80452795 Msa1217920:three_prime_UTR
CTCTTATCCTCTTGCAAAAG+AGG 0.451044 8_1:+80455428 None:intergenic
GGGATAATTCCTGGATTTGG+AGG 0.453229 8_1:-80459071 Msa1217920:intron
CTGAAAACTGTTGTCAGGGT+TGG 0.455162 8_1:-80452801 Msa1217920:three_prime_UTR
GTTGTTACTAGCACCAATAA+TGG 0.456871 8_1:-80453291 Msa1217920:three_prime_UTR
ATCATCACTGATACAATAGA+AGG 0.457304 8_1:-80459380 Msa1217920:intron
GTTTCTTCACTTACAGCCCT+TGG 0.458595 8_1:-80453322 Msa1217920:three_prime_UTR
TAAATACATATATTCAAGAT+TGG 0.463117 8_1:-80454761 Msa1217920:CDS
CTTTAATTCAGGGTCAGGAC+TGG 0.464144 8_1:+80455223 None:intergenic
AGGAAAGTTCTGAACAAATT+GGG 0.464229 8_1:+80455478 None:intergenic
ACCCAAGGCAAGGCCATCAA+TGG 0.465691 8_1:+80459254 None:intergenic
TGTCCACCTCATTGTATACT+TGG 0.468794 8_1:-80456038 Msa1217920:CDS
TGGGGTTACTGATCGTGGTC+TGG 0.468930 8_1:-80456623 Msa1217920:CDS
GTCTGCCTGAACTTCAGCTT+GGG 0.469540 8_1:-80459091 Msa1217920:CDS
AAAGCATCCTTTCCTTTCAC+TGG 0.469848 8_1:+80458042 None:intergenic
ACCAGAGGATGCTTGAGATT+GGG 0.474908 8_1:+80457829 None:intergenic
CCAAAATATCCAGGGCCCAC+TGG 0.476668 8_1:+80457962 None:intergenic
AGCTGAAGCATTTGATGCAC+TGG 0.477773 8_1:-80457664 Msa1217920:CDS
AGGATACCACCTGAAGAAAT+GGG 0.484323 8_1:+80455944 None:intergenic
GTCGACGGTCCAAAATATCC+AGG 0.487842 8_1:+80457953 None:intergenic
GCAGTGTTCATCAACTGATC+AGG 0.488840 8_1:+80457988 None:intergenic
GTTTAAATAAATGGTTATTG+TGG 0.489447 8_1:-80453252 Msa1217920:three_prime_UTR
CTTTCTTAACACGGCTCTGT+AGG 0.489868 8_1:+80456340 None:intergenic
AGAGAGTTGCTTGTGTATAT+GGG 0.492173 8_1:+80455703 None:intergenic
TCCCAATCTCAAGCATCCTC+TGG 0.493387 8_1:-80457830 Msa1217920:CDS
ATTCCTTTATTAGGTGCAAA+GGG 0.495576 8_1:-80459574 Msa1217920:intron
AATGCACCGGTAAACTTATG+AGG 0.495917 8_1:+80453182 None:intergenic
AGATGTAGACATGGTGATAG+AGG 0.497311 8_1:-80456244 Msa1217920:intron
GAGAAATGGTCAGAGTTGTA+TGG 0.498721 8_1:-80454739 Msa1217920:CDS
GGGCACACGGTTATGAATGT+TGG 0.500677 8_1:-80461085 Msa1217920:CDS
GGTGGAGGACTAATGGGCTC+TGG 0.502096 8_1:-80456568 Msa1217920:CDS
TTGATAATAGTCACTGTGAA+TGG 0.507384 8_1:-80461254 Msa1217920:five_prime_UTR
ATTGATTTATAAGTTCGCTC+AGG 0.508035 8_1:+80455458 None:intergenic
GCAAGCTAAGTCACGGATGT+AGG 0.509691 8_1:-80453523 Msa1217920:exon
ATAGTGTCTGGTCCCCGTGC+TGG 0.510635 8_1:-80457781 Msa1217920:CDS
ACCAAATTTGGAATGCCCAT+GGG 0.511824 8_1:-80455633 Msa1217920:CDS
TATTCCTTTATTAGGTGCAA+AGG 0.511923 8_1:-80459575 Msa1217920:intron
GGTGGTCTTCAAGAGTCAAA+AGG 0.512428 8_1:-80459517 Msa1217920:intron
CTTGATATTGCTGCTATCAT+GGG 0.512632 8_1:-80454917 Msa1217920:CDS
AAGGATGGCAACCTTCTTCA+CGG 0.512901 8_1:+80456591 None:intergenic
TCAAAATGAGTAGCAGAAAA+GGG 0.516058 8_1:-80461105 Msa1217920:exon
ACAGGCGAAACAACTCGAAA+AGG 0.516206 8_1:-80455275 Msa1217920:intron
TGAGATGATCTTCTTTCCTG+TGG 0.516475 8_1:-80454993 Msa1217920:CDS
ATCAAAGGAGAGAGAATTGA+CGG 0.516570 8_1:+80461024 None:intergenic
GAAAAGCAGTATACCATCAA+AGG 0.517513 8_1:+80461009 None:intergenic
AATGCTAGCCGTGCCTTACA+AGG 0.518534 8_1:-80452878 Msa1217920:three_prime_UTR
ATTTCCAGGACAAACCTGTA+AGG 0.519986 8_1:+80454881 None:intergenic
TTGACTGCAGCAGATTTGCT+TGG 0.520806 8_1:-80453379 Msa1217920:three_prime_UTR
AAGAAAACTCCGGTGGTGGT+TGG 0.522933 8_1:-80455762 Msa1217920:CDS
TATTGCTGCTATCATGGGAA+TGG 0.522999 8_1:-80454912 Msa1217920:CDS
TGAAAATACCATTGGATCAA+CGG 0.523204 8_1:+80455163 None:intergenic
CTACAGAGCCGTGTTAAGAA+AGG 0.523378 8_1:-80456339 Msa1217920:CDS
AGAAGTGGCATAACATGTGC+AGG 0.524021 8_1:+80455855 None:intergenic
ATTGCTGCTATCATGGGAAT+GGG 0.524426 8_1:-80454911 Msa1217920:CDS
AAGGCATTCTCTCTTGTCAA+AGG 0.524478 8_1:-80456291 Msa1217920:CDS
AATCTATTACCTCCAAATCC+AGG 0.524562 8_1:+80459062 None:intergenic
ATTGAAGCAGGAATAGTGTC+TGG 0.529436 8_1:-80457793 Msa1217920:CDS
TTGCAAGAGGATAAGAGGGC+TGG 0.529968 8_1:-80455422 Msa1217920:intron
GTTATGAATGTTGGAGCTGA+TGG 0.530473 8_1:-80461076 Msa1217920:CDS
CGCAGCTCTTGCAGCCAAGT+AGG 0.533462 8_1:+80454696 None:intergenic
GCTTGTCGTGTCCTCGATGA+AGG 0.533592 8_1:-80454962 Msa1217920:CDS
TAACACTTCCACAATTGACT+TGG 0.534164 8_1:-80456012 Msa1217920:CDS
AACCTTCCAGAGACCAGCAC+GGG 0.535190 8_1:+80457768 None:intergenic
GTGGTGGTTGGAAACTGTAC+AGG 0.538004 8_1:-80455750 Msa1217920:CDS
GGTCTGCCTGAACTTCAGCT+TGG 0.538578 8_1:-80459092 Msa1217920:CDS
GCCATCAATGGCAGCAACTG+AGG 0.539511 8_1:+80459266 None:intergenic
GGTTCCAAGATCCGTGAAGA+AGG 0.539865 8_1:-80456602 Msa1217920:CDS
AAGAAGGTTGCCATCCTTGG+TGG 0.541758 8_1:-80456586 Msa1217920:CDS
CTCTGAAGCTATCATAGTCG+AGG 0.544657 8_1:+80456265 None:intergenic
AACCAAATTTGGAATGCCCA+TGG 0.549285 8_1:-80455634 Msa1217920:CDS
CATTAGTCCTCCACCAAGGA+TGG 0.549444 8_1:+80456576 None:intergenic
TCCCCGTGCTGGTCTCTGGA+AGG 0.555568 8_1:-80457770 Msa1217920:intron
ACAATTGACTTGGACCTGAT+CGG 0.556105 8_1:-80456002 Msa1217920:CDS
GATAAAGAAAACTCCGGTGG+TGG 0.556279 8_1:-80455766 Msa1217920:CDS
AGCTGCGAAAGGAATTCCTC+TGG 0.556542 8_1:-80454680 Msa1217920:intron
TTGGCTTGAACAGGTGCCTG+GGG 0.557600 8_1:-80456641 Msa1217920:intron
AGGATTGATGATGGTGATGA+TGG 0.561716 8_1:+80461048 None:intergenic
GTTCTGAACAAATTGGGAGC+CGG 0.563555 8_1:+80455484 None:intergenic
AAGACTTCCAAGCCAGTGAA+AGG 0.570066 8_1:-80458054 Msa1217920:CDS
TCGTCTTGTTGGTCTGACAA+AGG 0.571030 8_1:-80458385 Msa1217920:CDS
CCTTGTTGGTTTCGGTGTGG+CGG 0.571755 8_1:-80455513 Msa1217920:CDS
TTTATTGCAGGGAGCCTCAG+TGG 0.571990 8_1:-80453547 Msa1217920:intron
TACTTGAGGAGATGTCCGCT+TGG 0.574891 8_1:+80455818 None:intergenic
GATCAGGTCCAAGTCAATTG+TGG 0.576055 8_1:+80456004 None:intergenic
ACTCTCTTGCTTGTTGAACG+TGG 0.576557 8_1:-80455687 Msa1217920:CDS
TCAACTGCAACTGCTCAACT+AGG 0.578099 8_1:-80459113 Msa1217920:CDS
TGTGGCGGGTGAAGCTATGA+TGG 0.578671 8_1:+80452829 None:intergenic
ATTTCAATCGATATCCACCC+AGG 0.580987 8_1:+80459401 None:intergenic
CCATCAATGGCAGCAACTGA+GGG 0.581078 8_1:+80459267 None:intergenic
AAGGTTGCCATCCTTGGTGG+AGG 0.582648 8_1:-80456583 Msa1217920:CDS
AGTGGTCTGCAGCAATGCAC+CGG 0.586024 8_1:+80453169 None:intergenic
CATTGGATCAACGGAGACAC+CGG 0.588849 8_1:+80455172 None:intergenic
TTAAATTACCTTTCTTAACA+CGG 0.589372 8_1:+80456331 None:intergenic
TGATGAACACTGCACGCCAG+TGG 0.592343 8_1:-80457978 Msa1217920:CDS
ATCTCTCTAGCTTCCCCAAG+TGG 0.593202 8_1:+80457889 None:intergenic
GCTTGTCAAGTTACAAGAGA+AGG 0.593813 8_1:-80455023 Msa1217920:CDS
TCTACTGAAAACTGTTGTCA+GGG 0.597120 8_1:-80452805 Msa1217920:three_prime_UTR
TAATACCTTAAAGGCCCCAT+GGG 0.597524 8_1:+80455618 None:intergenic
TTGAAAAGACTGGTAATCCA+TGG 0.601713 8_1:+80457928 None:intergenic
AATAATTCGATCTTGAGACT+TGG 0.602818 8_1:+80455971 None:intergenic
TCTTATCCTCTTGCAAAAGA+GGG 0.604628 8_1:+80455429 None:intergenic
TCAAAGGAGAGAGAATTGAC+GGG 0.604779 8_1:+80461025 None:intergenic
CTTGCAGCCAAGTAGGCACA+AGG 0.605837 8_1:+80454703 None:intergenic
GATGAACACTGCACGCCAGT+GGG 0.609849 8_1:-80457977 Msa1217920:CDS
AGTAACAACAAACACAGCCA+AGG 0.612056 8_1:+80453305 None:intergenic
AAAGAAGATAAAGAAAACTC+CGG 0.612409 8_1:-80455772 Msa1217920:CDS
TCTGAAGCTATCATAGTCGA+GGG 0.612594 8_1:+80456266 None:intergenic
CCAAATTTGGAATGCCCATG+GGG 0.613323 8_1:-80455632 Msa1217920:CDS
TTTGTATGATGATAGACGCA+AGG 0.613356 8_1:-80455246 Msa1217920:CDS
GTACGTACAATCTCCAGAAG+TGG 0.615404 8_1:+80455840 None:intergenic
CGACAAGCCTCATTCACCAC+AGG 0.617770 8_1:+80454977 None:intergenic
ATTGACGGGAGGATTGATGA+TGG 0.618728 8_1:+80461039 None:intergenic
AACAAGTCAACTATTACTTG+AGG 0.620177 8_1:+80455804 None:intergenic
TTAATACCTTAAAGGCCCCA+TGG 0.622172 8_1:+80455617 None:intergenic
TAGGCACAAGGCTTGAAGAA+CGG 0.623447 8_1:+80454715 None:intergenic
CAGTGGAGCAAGCTAAGTCA+CGG 0.624744 8_1:-80453530 Msa1217920:CDS
GTACAGTTTCCAACCACCAC+CGG 0.625203 8_1:+80455753 None:intergenic
CCGCCACACCGAAACCAACA+AGG 0.625859 8_1:+80455513 None:intergenic
AAAGGCACTTGAAATGATGT+TGG 0.628694 8_1:-80458367 Msa1217920:intron
TAAGAAAGGTAATTTAACCC+AGG 0.632176 8_1:-80456325 Msa1217920:CDS
TTGGCTGCAAGAGCTGCGAA+AGG 0.633349 8_1:-80454691 Msa1217920:CDS
GTATTTAGATCCAAGAGAGT+CGG 0.634201 8_1:+80454777 None:intergenic
GTGCCTGGGGTTACTGATCG+TGG 0.635864 8_1:-80456628 Msa1217920:CDS
TGGTAATCCATGGTCGTCGA+CGG 0.637899 8_1:+80457938 None:intergenic
TCCAGGACAAACCTGTAAGG+TGG 0.639879 8_1:+80454884 None:intergenic
AGACCACGATCAGTAACCCC+AGG 0.641999 8_1:+80456625 None:intergenic
AAGAGAACAAGTGTCGTGAA+CGG 0.642385 8_1:+80461230 None:intergenic
TAAATGGTTATTGTGGTACG+TGG 0.644466 8_1:-80453245 Msa1217920:three_prime_UTR
GTAACAACAAACACAGCCAA+GGG 0.646340 8_1:+80453306 None:intergenic
TTCCAAGCCAGTGAAAGGAA+AGG 0.647016 8_1:-80458049 Msa1217920:CDS
ATACAGAGCGTCCAAAACCT+GGG 0.647591 8_1:-80459418 Msa1217920:intron
AGGTTGTACCTTGTAAGGCA+CGG 0.658448 8_1:+80452870 None:intergenic
TAACCTTCCAGAGACCAGCA+CGG 0.660468 8_1:+80457767 None:intergenic
GAGTAGCAGAAAAGGGCACA+CGG 0.662667 8_1:-80461098 Msa1217920:CDS
TGACCTTGTTGGTTTCGGTG+TGG 0.664854 8_1:-80455516 Msa1217920:CDS
CTACCAAGTATACAATGAGG+TGG 0.665779 8_1:+80456035 None:intergenic
TCGACGGTCCAAAATATCCA+GGG 0.666513 8_1:+80457954 None:intergenic
GAAGATAAAGAAAACTCCGG+TGG 0.683130 8_1:-80455769 Msa1217920:CDS
TAGCTTCAGAGATGTAGACA+TGG 0.688113 8_1:-80456253 Msa1217920:CDS
TTTGTCAGACCAACAAGACG+AGG 0.689247 8_1:+80458387 None:intergenic
ATAACATCAATGCAAACCAG+AGG 0.690147 8_1:+80457814 None:intergenic
AAGGAGAGAGAATTGACGGG+AGG 0.693660 8_1:+80461028 None:intergenic
CAGAGCGTCCAAAACCTGGG+TGG 0.694788 8_1:-80459415 Msa1217920:CDS
TATACAAAGAGATGACGTCA+AGG 0.695762 8_1:-80459846 Msa1217920:CDS
TGACTTAGCTTGCTCCACTG+AGG 0.699217 8_1:+80453533 None:intergenic
AGCCCATTAGTCCTCCACCA+AGG 0.699918 8_1:+80456572 None:intergenic
TGGAGATTGTACGTACCAAG+CGG 0.712074 8_1:-80455833 Msa1217920:CDS
ACCTTCCAGAGACCAGCACG+GGG 0.718540 8_1:+80457769 None:intergenic
TGACTACAATACCTTCATCG+AGG 0.734339 8_1:+80454951 None:intergenic
TTACTACCAAGTATACAATG+AGG 0.759176 8_1:+80456032 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTGATATTCAAATTTTAT+AGG - chr8_1:80455402-80455421 Msa1217920:intron 10.0%
!! AAAAATTAATTGAAAATTGT+TGG + chr8_1:80455952-80455971 None:intergenic 10.0%
!!! ACTTATTAGTTTATAATTAA+TGG - chr8_1:80457147-80457166 Msa1217920:intron 10.0%
!!! ACATTTAAAGTAAATTTTAA+CGG - chr8_1:80458959-80458978 Msa1217920:intron 10.0%
!!! TATAGTATTGATTAAAATAA+AGG - chr8_1:80459683-80459702 Msa1217920:intron 10.0%
!! ATTAATTTAAATAAAGGAAA+TGG + chr8_1:80459715-80459734 None:intergenic 10.0%
!! AGAATCATTAATTTAAATAA+AGG + chr8_1:80459721-80459740 None:intergenic 10.0%
!! AAAAGGTTCAAAAAATTAAA+AGG - chr8_1:80453328-80453347 Msa1217920:three_prime_UTR 15.0%
!! ATTCTATTATTTAATGAATG+AGG - chr8_1:80453799-80453818 Msa1217920:intron 15.0%
!! TTTATATCCAAATATAATCA+CGG - chr8_1:80453875-80453894 Msa1217920:intron 15.0%
!!! CAATTTATTTCATTTTTTAG+CGG - chr8_1:80454749-80454768 Msa1217920:CDS 15.0%
!! AACAATATAAACTTATACAT+AGG - chr8_1:80456571-80456590 Msa1217920:CDS 15.0%
!! GAAAAATATTTAACAAATAC+AGG + chr8_1:80458126-80458145 None:intergenic 15.0%
!! CAATAAATTTCTTTAATTCA+GGG + chr8_1:80458837-80458856 None:intergenic 15.0%
!! TCAATAAATTTCTTTAATTC+AGG + chr8_1:80458838-80458857 None:intergenic 15.0%
!!! TTCATAATTGTTCATAATTT+TGG - chr8_1:80459211-80459230 Msa1217920:intron 15.0%
!!! TCATAATTGTTCATAATTTT+GGG - chr8_1:80459212-80459231 Msa1217920:intron 15.0%
!! TAAATACATATATTCAAGAT+TGG - chr8_1:80459286-80459305 Msa1217920:intron 15.0%
!! AAAGATAACATAAGAAAATA+AGG - chr8_1:80460357-80460376 Msa1217920:intron 15.0%
!! AAGATAACATAAGAAAATAA+GGG - chr8_1:80460358-80460377 Msa1217920:intron 15.0%
!! CAAATTATCATGAATAATTG+AGG - chr8_1:80453099-80453118 Msa1217920:intron 20.0%
!!! TTAATTTGAATTTTGCAGAA+CGG - chr8_1:80453170-80453189 Msa1217920:three_prime_UTR 20.0%
!! TAGTATCTTATAATACTCTT+AGG + chr8_1:80453610-80453629 None:intergenic 20.0%
!! ACTAAGATGATATATTAAGA+AGG - chr8_1:80454358-80454377 Msa1217920:intron 20.0%
!!! CTATTAGCAATGTTTTTATA+AGG - chr8_1:80455131-80455150 Msa1217920:intron 20.0%
!! TAAAACAAGGAATAAACAAA+AGG + chr8_1:80455320-80455339 None:intergenic 20.0%
!! TCTATTTAACATAAGAATCA+TGG + chr8_1:80455491-80455510 None:intergenic 20.0%
!! TAAAAAAAACAGTTATCCAT+AGG + chr8_1:80455577-80455596 None:intergenic 20.0%
!! TTTAAAGAGAGTAAAAATTG+TGG + chr8_1:80455710-80455729 None:intergenic 20.0%
!! ATGTTCAAATTTCATTAAAC+AGG - chr8_1:80455835-80455854 Msa1217920:CDS 20.0%
!! CATAAGTAAGTAAAAGTAAA+AGG + chr8_1:80456635-80456654 None:intergenic 20.0%
!! ACCTTCTATATTAAATTGTA+CGG - chr8_1:80457026-80457045 Msa1217920:intron 20.0%
!! TGTAAACAGAATTATAGAAA+TGG + chr8_1:80457234-80457253 None:intergenic 20.0%
!! AGAAGTAAATGAAAAATTCT+TGG - chr8_1:80457547-80457566 Msa1217920:intron 20.0%
!!! ACAACTTATTTCTTAATCAA+AGG + chr8_1:80457647-80457666 None:intergenic 20.0%
!! TTAAATTACCTTTCTTAACA+CGG + chr8_1:80457719-80457738 None:intergenic 20.0%
!! TATGAACAATTATGAAGTTT+AGG + chr8_1:80459207-80459226 None:intergenic 20.0%
!! AGTTGAAAATTACAATTAGT+AGG + chr8_1:80459502-80459521 None:intergenic 20.0%
!! TTAATGATTCTTTAAATCCT+TGG - chr8_1:80459730-80459749 Msa1217920:intron 20.0%
!!! ATGTTATCTTTGTTTTCAAA+AGG + chr8_1:80460348-80460367 None:intergenic 20.0%
!! AGATAACATAAGAAAATAAG+GGG - chr8_1:80460359-80460378 Msa1217920:intron 20.0%
!! GATAATTGTATACTAGTAAA+CGG - chr8_1:80460448-80460467 Msa1217920:intron 20.0%
!! GTTTAAATAAATGGTTATTG+TGG - chr8_1:80460795-80460814 Msa1217920:intron 20.0%
!! AACATAGTAAAGATAAAACA+AGG + chr8_1:80461032-80461051 None:intergenic 20.0%
! ATTATCATGAATAATTGAGG+CGG - chr8_1:80453102-80453121 Msa1217920:intron 25.0%
!!! TCTGGTTACATAAGTTTTAT+CGG - chr8_1:80453371-80453390 Msa1217920:three_prime_UTR 25.0%
!! TATGTTTTCATAAGCTTTCT+TGG + chr8_1:80453463-80453482 None:intergenic 25.0%
! AATAAGTTGTTTATCCAAAC+AGG - chr8_1:80453583-80453602 Msa1217920:intron 25.0%
! ATAAGTTGTTTATCCAAACA+GGG - chr8_1:80453584-80453603 Msa1217920:intron 25.0%
!! TATACAACTTGATGTGTTTT+TGG - chr8_1:80453628-80453647 Msa1217920:intron 25.0%
!!! ACTAATTGACTTTTTATGCA+AGG + chr8_1:80453657-80453676 None:intergenic 25.0%
! CTATTATTTAATGAATGAGG+TGG - chr8_1:80453802-80453821 Msa1217920:intron 25.0%
! AATGAAATATTGTGGTTTCA+CGG + chr8_1:80454047-80454066 None:intergenic 25.0%
!!! TACGTTGCTTTTTATTACTT+AGG - chr8_1:80454103-80454122 Msa1217920:intron 25.0%
! GAATCTTGTATTCCTTTATT+AGG - chr8_1:80454464-80454483 Msa1217920:intron 25.0%
!!! TACTTCAATTTATTTTCGAG+TGG - chr8_1:80454553-80454572 Msa1217920:intron 25.0%
!!! TTAGCAATGTTTTTATAAGG+AGG - chr8_1:80455134-80455153 Msa1217920:intron 25.0%
!!! TAGCAATGTTTTTATAAGGA+GGG - chr8_1:80455135-80455154 Msa1217920:intron 25.0%
! GTTTAATCCTTAACGATTTA+AGG - chr8_1:80455193-80455212 Msa1217920:CDS 25.0%
! ATAGTTACCTTAAATCGTTA+AGG + chr8_1:80455203-80455222 None:intergenic 25.0%
!! GAAAAATCATGATCAACTTT+TGG - chr8_1:80455223-80455242 Msa1217920:CDS 25.0%
! ACATGTAAGTTCATAAAACA+AGG + chr8_1:80455333-80455352 None:intergenic 25.0%
! ATGAAGAACTGAAATAAAAC+CGG - chr8_1:80455754-80455773 Msa1217920:CDS 25.0%
! AACATAGAACAGTCAATATA+TGG + chr8_1:80455820-80455839 None:intergenic 25.0%
! CTTAATTTAGAGAAAGAAAG+AGG + chr8_1:80455976-80455995 None:intergenic 25.0%
!!! ACATTGTTTTTGATCTTTGA+AGG - chr8_1:80456359-80456378 Msa1217920:intron 25.0%
!! AAACTTATACATAGGAGTTT+TGG - chr8_1:80456579-80456598 Msa1217920:CDS 25.0%
! TAACACCAGATTATATATGT+AGG - chr8_1:80456892-80456911 Msa1217920:intron 25.0%
! AACACCAGATTATATATGTA+GGG - chr8_1:80456893-80456912 Msa1217920:intron 25.0%
! TATTCCCTACATATATAATC+TGG + chr8_1:80456900-80456919 None:intergenic 25.0%
! ATATATGTAGGGAATATACT+TGG - chr8_1:80456904-80456923 Msa1217920:intron 25.0%
! TATATGTAGGGAATATACTT+GGG - chr8_1:80456905-80456924 Msa1217920:intron 25.0%
! TAATATAGAAGGTCCTTTAT+GGG + chr8_1:80457019-80457038 None:intergenic 25.0%
! TTAATATAGAAGGTCCTTTA+TGG + chr8_1:80457020-80457039 None:intergenic 25.0%
! ACCGTACAATTTAATATAGA+AGG + chr8_1:80457030-80457049 None:intergenic 25.0%
! GCAATTTAGATATGCATTAT+AGG + chr8_1:80457299-80457318 None:intergenic 25.0%
! ATGAATTTCTCAATACTTCT+TGG - chr8_1:80457387-80457406 Msa1217920:intron 25.0%
! AAATGAATGTCAAACTCAAT+AGG + chr8_1:80457857-80457876 None:intergenic 25.0%
! AAAGAAGATAAAGAAAACTC+CGG - chr8_1:80458275-80458294 Msa1217920:intron 25.0%
!! TTAGTTTGAAGATATAACTG+TGG - chr8_1:80458668-80458687 Msa1217920:intron 25.0%
! TATTTAGTAGAAAAACACCA+GGG + chr8_1:80458717-80458736 None:intergenic 25.0%
! TTATTTAGTAGAAAAACACC+AGG + chr8_1:80458718-80458737 None:intergenic 25.0%
! AGAAATTTATTGAGAAAGCT+AGG - chr8_1:80458845-80458864 Msa1217920:intron 25.0%
! GAAAAGAATGAAAATACCAT+TGG + chr8_1:80458895-80458914 None:intergenic 25.0%
! TATATTCAAGATTGGAGAAA+TGG - chr8_1:80459294-80459313 Msa1217920:intron 25.0%
! AAACTGAAATAAACAAGCAT+AGG + chr8_1:80459400-80459419 None:intergenic 25.0%
! TAGCCAACTATATTATCAAT+TGG - chr8_1:80459456-80459475 Msa1217920:intron 25.0%
!! TGACCAATTGATAATATAGT+TGG + chr8_1:80459462-80459481 None:intergenic 25.0%
!! CTAATTGTAATTTTCAACTG+CGG - chr8_1:80459503-80459522 Msa1217920:intron 25.0%
! AAATTTCATCAATACAAGTG+CGG + chr8_1:80459624-80459643 None:intergenic 25.0%
!! AACTAAGCCTTATAATTAGA+GGG + chr8_1:80459781-80459800 None:intergenic 25.0%
!! AAACTAAGCCTTATAATTAG+AGG + chr8_1:80459782-80459801 None:intergenic 25.0%
! TTAAATGTTACGACGATAAA+TGG - chr8_1:80459824-80459843 Msa1217920:intron 25.0%
! AGATCCTAATTCAAATGAAA+GGG + chr8_1:80460046-80460065 None:intergenic 25.0%
! CATGTAAACATTTGTATACA+AGG + chr8_1:80460105-80460124 None:intergenic 25.0%
! TGCAGATTAATCATACATAA+AGG + chr8_1:80460291-80460310 None:intergenic 25.0%
! AAATCATATCACTTTCACTA+TGG - chr8_1:80460426-80460445 Msa1217920:intron 25.0%
!!! AATTTGTTGTGTTTATTGCA+GGG - chr8_1:80460489-80460508 Msa1217920:intron 25.0%
!! CAACTATATTCTTAGGATTT+TGG + chr8_1:80460607-80460626 None:intergenic 25.0%
! CAAGTTTCAACTATATTCTT+AGG + chr8_1:80460614-80460633 None:intergenic 25.0%
!!! GAGTTGTTGGTTTAAATAAA+TGG - chr8_1:80460786-80460805 Msa1217920:intron 25.0%
! CAGGAATTGAGTTAATAATT+AGG - chr8_1:80460945-80460964 Msa1217920:intron 25.0%
! AATTGAGTTAATAATTAGGC+AGG - chr8_1:80460949-80460968 Msa1217920:intron 25.0%
! TAGTAAAGATAAAACAAGGA+AGG + chr8_1:80461028-80461047 None:intergenic 25.0%
! CATTTAATTCACAGGTTTAA+TGG + chr8_1:80461118-80461137 None:intergenic 25.0%
! AAAAAGGTCATTTAATTCAC+AGG + chr8_1:80461126-80461145 None:intergenic 25.0%
!! GTATTTAAGGCTCTTAAAAA+AGG + chr8_1:80461142-80461161 None:intergenic 25.0%
! TAAGAGCCTTAAATACAAAT+AGG - chr8_1:80461146-80461165 Msa1217920:five_prime_UTR 25.0%
! AGCATTCCTATTTGTATTTA+AGG + chr8_1:80461155-80461174 None:intergenic 25.0%
!! GAGATTCAAGTTTGATTTGA+AGG + chr8_1:80452843-80452862 None:intergenic 30.0%
!! CGATGAAAATGCTTTTGTTT+TGG + chr8_1:80452872-80452891 None:intergenic 30.0%
ATCAAAATGAGTAGCAGAAA+AGG - chr8_1:80452941-80452960 Msa1217920:three_prime_UTR 30.0%
TCAAAATGAGTAGCAGAAAA+GGG - chr8_1:80452942-80452961 Msa1217920:three_prime_UTR 30.0%
AAAATGGAAGAAGGAAAATG+AGG + chr8_1:80453067-80453086 None:intergenic 30.0%
GATATAAGAAAATGCTACAC+AGG - chr8_1:80453284-80453303 Msa1217920:three_prime_UTR 30.0%
! CCTTTTACATGAAAACCAAA+GGG + chr8_1:80453314-80453333 None:intergenic 30.0%
! ACCTTTTACATGAAAACCAA+AGG + chr8_1:80453315-80453334 None:intergenic 30.0%
TAAGACAATAAGCTGAAAAC+AGG + chr8_1:80453434-80453453 None:intergenic 30.0%
TGGATAAACAACTTATTTGC+AGG + chr8_1:80453580-80453599 None:intergenic 30.0%
ATCAGTGTATTGTTGGAAAT+TGG + chr8_1:80453705-80453724 None:intergenic 30.0%
AAACAACATCAGTGTATTGT+TGG + chr8_1:80453712-80453731 None:intergenic 30.0%
TATTTAATGAATGAGGTGGA+TGG - chr8_1:80453806-80453825 Msa1217920:intron 30.0%
ATGTCCATTGAAGTTAACTT+TGG - chr8_1:80453941-80453960 Msa1217920:intron 30.0%
ATCACCAAAGTTAACTTCAA+TGG + chr8_1:80453948-80453967 None:intergenic 30.0%
TTCTGGACAATGAAATATTG+TGG + chr8_1:80454055-80454074 None:intergenic 30.0%
GAAAATGACACTGAAAATTC+TGG + chr8_1:80454072-80454091 None:intergenic 30.0%
!! TTTAAAGGAGAGTTTTGATC+AGG - chr8_1:80454177-80454196 Msa1217920:intron 30.0%
! GAATTGAACAACTTTCAAGT+TGG - chr8_1:80454257-80454276 Msa1217920:intron 30.0%
TACTGTTCAAAAAATTGCGA+AGG - chr8_1:80454281-80454300 Msa1217920:intron 30.0%
ACTGTTCAAAAAATTGCGAA+GGG - chr8_1:80454282-80454301 Msa1217920:intron 30.0%
TATTCCTTTATTAGGTGCAA+AGG - chr8_1:80454472-80454491 Msa1217920:intron 30.0%
ATTCCTTTATTAGGTGCAAA+GGG - chr8_1:80454473-80454492 Msa1217920:intron 30.0%
!! GGTTTTGATATTTCTGCATT+TGG - chr8_1:80454509-80454528 Msa1217920:intron 30.0%
! TTTGATATTTCTGCATTTGG+TGG - chr8_1:80454512-80454531 Msa1217920:intron 30.0%
ATCATCACTGATACAATAGA+AGG - chr8_1:80454667-80454686 Msa1217920:intron 30.0%
TTACCAGTTCTCTCTAATAT+AGG - chr8_1:80454894-80454913 Msa1217920:intron 30.0%
GAATATCAAATGAGTTTCCT+CGG + chr8_1:80455393-80455412 None:intergenic 30.0%
AGAACAGTCAATATATGGTT+TGG + chr8_1:80455815-80455834 None:intergenic 30.0%
CAAATTTCATTAAACAGGAC+AGG - chr8_1:80455840-80455859 Msa1217920:CDS 30.0%
!! TTTTTCAGTCTTGAAAAGAC+TGG + chr8_1:80456132-80456151 None:intergenic 30.0%
ACTGAAAAAATAGAACCACT+TGG - chr8_1:80456143-80456162 Msa1217920:intron 30.0%
CTGAAAAAATAGAACCACTT+GGG - chr8_1:80456144-80456163 Msa1217920:intron 30.0%
TGAAAAAATAGAACCACTTG+GGG - chr8_1:80456145-80456164 Msa1217920:intron 30.0%
!!! CACATATTTTTTGCTCAAAG+AGG - chr8_1:80456435-80456454 Msa1217920:intron 30.0%
CTCTGCAATAAAGAAGAATA+TGG - chr8_1:80456526-80456545 Msa1217920:CDS 30.0%
AATTTGCAAATTAAGCCACA+GGG - chr8_1:80456807-80456826 Msa1217920:intron 30.0%
TCAATAAGAAGCTAAACTGA+AGG + chr8_1:80456859-80456878 None:intergenic 30.0%
ATAAAACCAGGTGGATATAT+AGG - chr8_1:80456956-80456975 Msa1217920:intron 30.0%
! TTGTACGGTAGTTGATATAA+AGG - chr8_1:80457041-80457060 Msa1217920:intron 30.0%
AATTAATGGTTGCAATGCTT+AGG - chr8_1:80457161-80457180 Msa1217920:intron 30.0%
AAAACTCAGTACACAAAATC+AGG + chr8_1:80457349-80457368 None:intergenic 30.0%
AATGAAAAATTCTTGGATGC+TGG - chr8_1:80457554-80457573 Msa1217920:intron 30.0%
TGAGAACAAACTATATCAGA+TGG - chr8_1:80457595-80457614 Msa1217920:intron 30.0%
!! GTAAAGTTTGATAGTGACTA+GGG + chr8_1:80457625-80457644 None:intergenic 30.0%
TAAGAAAGGTAATTTAACCC+AGG - chr8_1:80457722-80457741 Msa1217920:intron 30.0%
AACCCAGGAAAAATTTGAAA+AGG - chr8_1:80457737-80457756 Msa1217920:intron 30.0%
! TGCCTTTTCAAATTTTTCCT+GGG + chr8_1:80457742-80457761 None:intergenic 30.0%
! ATGCCTTTTCAAATTTTTCC+TGG + chr8_1:80457743-80457762 None:intergenic 30.0%
TTTGACATTCATTTACGTCA+TGG - chr8_1:80457863-80457882 Msa1217920:CDS 30.0%
TTACTACCAAGTATACAATG+AGG + chr8_1:80458018-80458037 None:intergenic 30.0%
AATAATTCGATCTTGAGACT+TGG + chr8_1:80458079-80458098 None:intergenic 30.0%
AAGTCTCAAGATCGAATTAT+TGG - chr8_1:80458078-80458097 Msa1217920:intron 30.0%
AACAAGTCAACTATTACTTG+AGG + chr8_1:80458246-80458265 None:intergenic 30.0%
!! TACAGGATTTGCTGTTAATA+GGG - chr8_1:80458314-80458333 Msa1217920:intron 30.0%
TGGTTACTGCTTTATCAATT+TGG + chr8_1:80458398-80458417 None:intergenic 30.0%
GATAAAGCAGTAACCAAATT+TGG - chr8_1:80458402-80458421 Msa1217920:CDS 30.0%
!! AGGAAAGTTCTGAACAAATT+GGG + chr8_1:80458572-80458591 None:intergenic 30.0%
! ATTGATTTATAAGTTCGCTC+AGG + chr8_1:80458592-80458611 None:intergenic 30.0%
ACCTGTTAAAATAAATTCCC+TGG - chr8_1:80458697-80458716 Msa1217920:intron 30.0%
!!! ACCAGGGAATTTATTTTAAC+AGG + chr8_1:80458701-80458720 None:intergenic 30.0%
ATATAACACTTGCTTCTAAC+AGG - chr8_1:80458754-80458773 Msa1217920:intron 30.0%
AATTTCTTTAATTCAGGGTC+AGG + chr8_1:80458832-80458851 None:intergenic 30.0%
TGAAAATACCATTGGATCAA+CGG + chr8_1:80458887-80458906 None:intergenic 30.0%
!!! ATAATCCGTGCCATATTTTT+TGG - chr8_1:80458915-80458934 Msa1217920:intron 30.0%
TAGTCACTAGCCAAAAAATA+TGG + chr8_1:80458928-80458947 None:intergenic 30.0%
!! ATTTTAACGGTAAATTCCAC+CGG - chr8_1:80458972-80458991 Msa1217920:intron 30.0%
AAACATGCCAAATAATTTCC+AGG + chr8_1:80459183-80459202 None:intergenic 30.0%
CTATATTATCAATTGGTCAC+TGG - chr8_1:80459463-80459482 Msa1217920:intron 30.0%
ATAAAACATACAGCTATGCT+TGG - chr8_1:80459649-80459668 Msa1217920:intron 30.0%
ACCAAATCCCTCTAATTATA+AGG - chr8_1:80459771-80459790 Msa1217920:intron 30.0%
TCGTCGTAACATTTAATACA+AGG + chr8_1:80459820-80459839 None:intergenic 30.0%
ATAGCTACAAGAGATAAGAT+AGG - chr8_1:80459847-80459866 Msa1217920:CDS 30.0%
! TCTATCACCTTTTCTACAAT+AGG + chr8_1:80459905-80459924 None:intergenic 30.0%
GAGATCCTAATTCAAATGAA+AGG + chr8_1:80460047-80460066 None:intergenic 30.0%
TATTTACTTTATCCCTCGAA+GGG + chr8_1:80460135-80460154 None:intergenic 30.0%
TTATTTACTTTATCCCTCGA+AGG + chr8_1:80460136-80460155 None:intergenic 30.0%
TACTACTAGCATGTTATTCA+AGG + chr8_1:80460247-80460266 None:intergenic 30.0%
!! GAATTTGTTGTGTTTATTGC+AGG - chr8_1:80460488-80460507 Msa1217920:intron 30.0%
!! TAGGATTTTGGAGAAAGAAA+GGG + chr8_1:80460595-80460614 None:intergenic 30.0%
!! TTAGGATTTTGGAGAAAGAA+AGG + chr8_1:80460596-80460615 None:intergenic 30.0%
CAACTCAATACTTCCATTAT+TGG + chr8_1:80460772-80460791 None:intergenic 30.0%
!! TAATGGAAGTATTGAGTTGT+TGG - chr8_1:80460773-80460792 Msa1217920:intron 30.0%
ATGTTTCCTCATAAGTTTAC+CGG - chr8_1:80460859-80460878 Msa1217920:intron 30.0%
ATTGACATTGCCATTATTAG+TGG + chr8_1:80460899-80460918 None:intergenic 30.0%
TTTCCTCTGCATTAAAAATC+AGG + chr8_1:80461077-80461096 None:intergenic 30.0%
AATTCACAGGTTTAATGGTT+AGG + chr8_1:80461113-80461132 None:intergenic 30.0%
CAACCTGTTGAAGAATAATA+TGG - chr8_1:80461194-80461213 Msa1217920:five_prime_UTR 30.0%
ATCAAAGGAGAGAGAATTGA+CGG + chr8_1:80453026-80453045 None:intergenic 35.0%
GAAAAGCAGTATACCATCAA+AGG + chr8_1:80453041-80453060 None:intergenic 35.0%
GTGAAGAAGAAAATGGAAGA+AGG + chr8_1:80453076-80453095 None:intergenic 35.0%
TTTGCACGTGAAGAAGAAAA+TGG + chr8_1:80453083-80453102 None:intergenic 35.0%
!!! CCCTTTGGTTTTCATGTAAA+AGG - chr8_1:80453311-80453330 Msa1217920:three_prime_UTR 35.0%
AAGGAAAAGATGAGCTTGAA+TGG - chr8_1:80453347-80453366 Msa1217920:three_prime_UTR 35.0%
ACTGTAGCCGTGATTATATT+TGG + chr8_1:80453885-80453904 None:intergenic 35.0%
TCCTTTAAACTTCGCAATAC+TGG + chr8_1:80454166-80454185 None:intergenic 35.0%
TATACAAAGAGATGACGTCA+AGG - chr8_1:80454201-80454220 Msa1217920:intron 35.0%
TTTCCCTTTGCACCTAATAA+AGG + chr8_1:80454479-80454498 None:intergenic 35.0%
!!! CAATTTATTTTCGAGTGGAG+TGG - chr8_1:80454558-80454577 Msa1217920:intron 35.0%
ATGCCTATATTAGAGAGAAC+TGG + chr8_1:80454900-80454919 None:intergenic 35.0%
AATCTATTACCTCCAAATCC+AGG + chr8_1:80454988-80455007 None:intergenic 35.0%
! AGATTTATGATGTGCTGTTC+TGG + chr8_1:80455169-80455188 None:intergenic 35.0%
TCATGATTAACTTCGACGAA+TGG - chr8_1:80455254-80455273 Msa1217920:CDS 35.0%
ACTTACATGTAAACTGCTAC+TGG - chr8_1:80455343-80455362 Msa1217920:intron 35.0%
TTCCCTAGTAATGTTAACCT+TGG - chr8_1:80455606-80455625 Msa1217920:intron 35.0%
TCCCTAGTAATGTTAACCTT+GGG - chr8_1:80455607-80455626 Msa1217920:intron 35.0%
ACCCAAGGTTAACATTACTA+GGG + chr8_1:80455611-80455630 None:intergenic 35.0%
AACCCAAGGTTAACATTACT+AGG + chr8_1:80455612-80455631 None:intergenic 35.0%
CTAAGACAATTTACAACCCA+AGG + chr8_1:80455626-80455645 None:intergenic 35.0%
! CTTGGGTTGTAAATTGTCTT+AGG - chr8_1:80455624-80455643 Msa1217920:CDS 35.0%
!! AAAGGCACTTGAAATGATGT+TGG - chr8_1:80455680-80455699 Msa1217920:CDS 35.0%
! CATTAAACAGGACAGGTTTT+TGG - chr8_1:80455847-80455866 Msa1217920:CDS 35.0%
!!! TTTTGGTTCAGTTCTCCATT+TGG - chr8_1:80455864-80455883 Msa1217920:intron 35.0%
TTAGAGTTGTGACTAAGACA+TGG - chr8_1:80455922-80455941 Msa1217920:intron 35.0%
!! AGGAAAGGATGCTTTTAGTT+CGG - chr8_1:80456013-80456032 Msa1217920:CDS 35.0%
TTGAAAAGACTGGTAATCCA+TGG + chr8_1:80456122-80456141 None:intergenic 35.0%
ATAACATCAATGCAAACCAG+AGG + chr8_1:80456236-80456255 None:intergenic 35.0%
! TGCATTGATGTTATTGAAGC+AGG - chr8_1:80456242-80456261 Msa1217920:intron 35.0%
! AGATATTTTCCCACTTGAAG+GGG + chr8_1:80456508-80456527 None:intergenic 35.0%
! GAGATATTTTCCCACTTGAA+GGG + chr8_1:80456509-80456528 None:intergenic 35.0%
! AGAGATATTTTCCCACTTGA+AGG + chr8_1:80456510-80456529 None:intergenic 35.0%
CAATTTGCAAATTAAGCCAC+AGG - chr8_1:80456806-80456825 Msa1217920:intron 35.0%
AGAAGAACAAAAATTCCCTG+TGG + chr8_1:80456825-80456844 None:intergenic 35.0%
! TTTAGCTTCTTATTGAGCTG+TGG - chr8_1:80456863-80456882 Msa1217920:intron 35.0%
TGAGTCTGATCTCTTAACTT+GGG - chr8_1:80456930-80456949 Msa1217920:intron 35.0%
GTGGATATATAGGAGAGTTA+TGG - chr8_1:80456966-80456985 Msa1217920:intron 35.0%
TTATGGCCAAGAACTGAATT+TGG - chr8_1:80456983-80457002 Msa1217920:intron 35.0%
AAAAGGCCAAATTCAGTTCT+TGG + chr8_1:80456992-80457011 None:intergenic 35.0%
!! TGGCCTTTTATTTCCCATAA+AGG - chr8_1:80457003-80457022 Msa1217920:intron 35.0%
GGTCCTTTATGGGAAATAAA+AGG + chr8_1:80457009-80457028 None:intergenic 35.0%
TATAGGCACAGATTCAAGAT+GGG + chr8_1:80457282-80457301 None:intergenic 35.0%
TTATAGGCACAGATTCAAGA+TGG + chr8_1:80457283-80457302 None:intergenic 35.0%
GCTGGTATCAATAGGATTAA+AGG - chr8_1:80457572-80457591 Msa1217920:intron 35.0%
!! GGTAAAGTTTGATAGTGACT+AGG + chr8_1:80457626-80457645 None:intergenic 35.0%
!! AGCAAAGATTTGTTGCTTCA+AGG + chr8_1:80457974-80457993 None:intergenic 35.0%
TAACACTTCCACAATTGACT+TGG - chr8_1:80458035-80458054 Msa1217920:CDS 35.0%
!! GTACAGGATTTGCTGTTAAT+AGG - chr8_1:80458313-80458332 Msa1217920:intron 35.0%
AGAGAGTTGCTTGTGTATAT+GGG + chr8_1:80458347-80458366 None:intergenic 35.0%
AAGAGAGTTGCTTGTGTATA+TGG + chr8_1:80458348-80458367 None:intergenic 35.0%
TCCAGGCATTAATACCTTAA+AGG + chr8_1:80458441-80458460 None:intergenic 35.0%
TGTTACAAACTAGACCTTTC+AGG + chr8_1:80458490-80458509 None:intergenic 35.0%
!! CAGGAAAGTTCTGAACAAAT+TGG + chr8_1:80458573-80458592 None:intergenic 35.0%
TCTTATCCTCTTGCAAAAGA+GGG + chr8_1:80458621-80458640 None:intergenic 35.0%
! TCTTTTGCAAGAGGATAAGA+GGG - chr8_1:80458621-80458640 Msa1217920:intron 35.0%
TTTGTATGATGATAGACGCA+AGG - chr8_1:80458801-80458820 Msa1217920:intron 35.0%
ACTAGCCAAAAAATATGGCA+CGG + chr8_1:80458923-80458942 None:intergenic 35.0%
TCTTGATATTGCTGCTATCA+TGG - chr8_1:80459129-80459148 Msa1217920:CDS 35.0%
CTTGATATTGCTGCTATCAT+GGG - chr8_1:80459130-80459149 Msa1217920:CDS 35.0%
GGTTTGTCCTGGAAATTATT+TGG - chr8_1:80459173-80459192 Msa1217920:intron 35.0%
!!! TTTTGGGATTGAAATTCTCC+AGG - chr8_1:80459228-80459247 Msa1217920:intron 35.0%
! TTTGGGATTGAAATTCTCCA+GGG - chr8_1:80459229-80459248 Msa1217920:intron 35.0%
GTATTTAGATCCAAGAGAGT+CGG + chr8_1:80459273-80459292 None:intergenic 35.0%
GCCTTATAATTAGAGGGATT+TGG + chr8_1:80459775-80459794 None:intergenic 35.0%
AGATAGGAAACATTCGTCAA+AGG - chr8_1:80459863-80459882 Msa1217920:CDS 35.0%
ACATTCGTCAAAGGAAAAGT+TGG - chr8_1:80459872-80459891 Msa1217920:CDS 35.0%
CATTCGTCAAAGGAAAAGTT+GGG - chr8_1:80459873-80459892 Msa1217920:CDS 35.0%
GATAGCTCCTATTGTAGAAA+AGG - chr8_1:80459895-80459914 Msa1217920:intron 35.0%
ACATCAGATCTCTTAAGACA+AGG + chr8_1:80459929-80459948 None:intergenic 35.0%
AACAATGCTTCATGCTTCTA+TGG + chr8_1:80459965-80459984 None:intergenic 35.0%
ACCCATTCCAACATGAATTA+CGG - chr8_1:80459985-80460004 Msa1217920:intron 35.0%
TCCGTAATTCATGTTGGAAT+GGG + chr8_1:80459989-80460008 None:intergenic 35.0%
ATCTTGTCCGTAATTCATGT+TGG + chr8_1:80459995-80460014 None:intergenic 35.0%
CACTCCCTTTCATTTGAATT+AGG - chr8_1:80460039-80460058 Msa1217920:intron 35.0%
TTTGAATTAGGATCTCCCAA+TGG - chr8_1:80460051-80460070 Msa1217920:intron 35.0%
TTGAATTAGGATCTCCCAAT+GGG - chr8_1:80460052-80460071 Msa1217920:intron 35.0%
GTTAAGATGAAAACAAGGAG+TGG + chr8_1:80460159-80460178 None:intergenic 35.0%
! GTGCTGTTAAGATGAAAACA+AGG + chr8_1:80460164-80460183 None:intergenic 35.0%
!! GGTCGAAATAGAAGTACTTT+AGG - chr8_1:80460689-80460708 Msa1217920:intron 35.0%
!! TACTTTAGGATCAGCTATAC+AGG - chr8_1:80460703-80460722 Msa1217920:intron 35.0%
GTTGTTACTAGCACCAATAA+TGG - chr8_1:80460756-80460775 Msa1217920:intron 35.0%
TAAATGGTTATTGTGGTACG+TGG - chr8_1:80460802-80460821 Msa1217920:intron 35.0%
!!! GTTTTGAAGAGAGAATCACA+AGG + chr8_1:80460995-80461014 None:intergenic 35.0%
ACTATGTTACTCAGTAACTC+AGG - chr8_1:80461044-80461063 Msa1217920:CDS 35.0%
! CATCCTGATTTTTAATGCAG+AGG - chr8_1:80461071-80461090 Msa1217920:CDS 35.0%
GGTCCATATTATTCTTCAAC+AGG + chr8_1:80461200-80461219 None:intergenic 35.0%
! CAACAGTTTTCAGTAGATTG+TGG + chr8_1:80461239-80461258 None:intergenic 35.0%
ATCTACTGAAAACTGTTGTC+AGG - chr8_1:80461241-80461260 Msa1217920:five_prime_UTR 35.0%
TCTACTGAAAACTGTTGTCA+GGG - chr8_1:80461242-80461261 Msa1217920:five_prime_UTR 35.0%
! AAGAGAACAAGTGTCGTGAA+CGG + chr8_1:80452820-80452839 None:intergenic 40.0%
GTTATGAATGTTGGAGCTGA+TGG - chr8_1:80452971-80452990 Msa1217920:intron 40.0%
!! AGGATTGATGATGGTGATGA+TGG + chr8_1:80453002-80453021 None:intergenic 40.0%
TCAAAGGAGAGAGAATTGAC+GGG + chr8_1:80453025-80453044 None:intergenic 40.0%
GTCAATTCTCTCTCCTTTGA+TGG - chr8_1:80453025-80453044 Msa1217920:intron 40.0%
AAGATGAGCTTGAATGGATC+TGG - chr8_1:80453353-80453372 Msa1217920:three_prime_UTR 40.0%
TAATACTCTTAGGCCCTGTT+TGG + chr8_1:80453600-80453619 None:intergenic 40.0%
GCCAGTATTGCGAAGTTTAA+AGG - chr8_1:80454162-80454181 Msa1217920:intron 40.0%
! GTCAAGGCAATTGTTGTTAC+AGG - chr8_1:80454217-80454236 Msa1217920:intron 40.0%
TGCTTCTCCAGAGATAATCT+CGG - chr8_1:80454411-80454430 Msa1217920:intron 40.0%
AAGTTGACCGAGATTATCTC+TGG + chr8_1:80454421-80454440 None:intergenic 40.0%
! GGTGCAAAGGGAAAATTTTC+TGG - chr8_1:80454485-80454504 Msa1217920:intron 40.0%
! GCAAAGGGAAAATTTTCTGG+AGG - chr8_1:80454488-80454507 Msa1217920:intron 40.0%
ATTTCAATCGATATCCACCC+AGG + chr8_1:80454649-80454668 None:intergenic 40.0%
ATTATCCCAAGCTGAAGTTC+AGG + chr8_1:80454964-80454983 None:intergenic 40.0%
CTTGGGATAATTCCTGGATT+TGG - chr8_1:80454973-80454992 Msa1217920:CDS 40.0%
TGGATGATGTGTTGAATGAC+TGG - chr8_1:80455363-80455382 Msa1217920:intron 40.0%
GGATGATGTGTTGAATGACT+GGG - chr8_1:80455364-80455383 Msa1217920:intron 40.0%
TAAGTCAAAGTTCGTACCTG+AGG - chr8_1:80455452-80455471 Msa1217920:CDS 40.0%
ACCACGAAATTGGATAGATC+CGG + chr8_1:80455776-80455795 None:intergenic 40.0%
GATCTATCCAATTTCGTGGT+TGG - chr8_1:80455776-80455795 Msa1217920:CDS 40.0%
AAACGCAACTGCATTCCAAA+TGG + chr8_1:80455882-80455901 None:intergenic 40.0%
! AAAGCATCCTTTCCTTTCAC+TGG + chr8_1:80456008-80456027 None:intergenic 40.0%
!!! GGAAAGGATGCTTTTAGTTC+GGG - chr8_1:80456014-80456033 Msa1217920:CDS 40.0%
!!! GAAAGGATGCTTTTAGTTCG+GGG - chr8_1:80456015-80456034 Msa1217920:CDS 40.0%
ATTGAAGCAGGAATAGTGTC+TGG - chr8_1:80456254-80456273 Msa1217920:CDS 40.0%
TGCTCAAAGAGGAACATCTA+AGG - chr8_1:80456446-80456465 Msa1217920:intron 40.0%
ACATTTCTTCCCCTTCAAGT+GGG - chr8_1:80456496-80456515 Msa1217920:CDS 40.0%
TTTGCAAATTGTGCTCCACA+GGG + chr8_1:80456797-80456816 None:intergenic 40.0%
ATTTGCAAATTGTGCTCCAC+AGG + chr8_1:80456798-80456817 None:intergenic 40.0%
CTGAGTCTGATCTCTTAACT+TGG - chr8_1:80456929-80456948 Msa1217920:intron 40.0%
! GAGTCTGATCTCTTAACTTG+GGG - chr8_1:80456931-80456950 Msa1217920:intron 40.0%
TAACTTGGGGCTATAAAACC+AGG - chr8_1:80456944-80456963 Msa1217920:intron 40.0%
AACTCTCCTATATATCCACC+TGG + chr8_1:80456965-80456984 None:intergenic 40.0%
GGCTGTATCTCGTTTCAAAA+TGG - chr8_1:80457197-80457216 Msa1217920:intron 40.0%
! CAATACTTCTTGGCTTGAAC+AGG - chr8_1:80457397-80457416 Msa1217920:intron 40.0%
TCTTGGATGCTGGTATCAAT+AGG - chr8_1:80457564-80457583 Msa1217920:intron 40.0%
!! TGTAGGTTTGCTGCACAAAA+AGG + chr8_1:80457693-80457712 None:intergenic 40.0%
! AAGGCATTCTCTCTTGTCAA+AGG - chr8_1:80457756-80457775 Msa1217920:intron 40.0%
TAGCTTCAGAGATGTAGACA+TGG - chr8_1:80457794-80457813 Msa1217920:CDS 40.0%
AGATGTAGACATGGTGATAG+AGG - chr8_1:80457803-80457822 Msa1217920:CDS 40.0%
TGTGCTTCATGCTTCATGTT+TGG - chr8_1:80457925-80457944 Msa1217920:CDS 40.0%
GTGCTTCATGCTTCATGTTT+GGG - chr8_1:80457926-80457945 Msa1217920:CDS 40.0%
TGTCCACCTCATTGTATACT+TGG - chr8_1:80458009-80458028 Msa1217920:CDS 40.0%
CTACCAAGTATACAATGAGG+TGG + chr8_1:80458015-80458034 None:intergenic 40.0%
!! ACAATTGACTTGGACCTGAT+CGG - chr8_1:80458045-80458064 Msa1217920:CDS 40.0%
TTATTGGAGCCCATTTCTTC+AGG - chr8_1:80458094-80458113 Msa1217920:intron 40.0%
AGGATACCACCTGAAGAAAT+GGG + chr8_1:80458106-80458125 None:intergenic 40.0%
GAAGATAAAGAAAACTCCGG+TGG - chr8_1:80458278-80458297 Msa1217920:intron 40.0%
! AACCAAATTTGGAATGCCCA+TGG - chr8_1:80458413-80458432 Msa1217920:intron 40.0%
! ACCAAATTTGGAATGCCCAT+GGG - chr8_1:80458414-80458433 Msa1217920:intron 40.0%
TAATACCTTAAAGGCCCCAT+GGG + chr8_1:80458432-80458451 None:intergenic 40.0%
TTAATACCTTAAAGGCCCCA+TGG + chr8_1:80458433-80458452 None:intergenic 40.0%
!! GCCTTTAAGGTATTAATGCC+TGG - chr8_1:80458437-80458456 Msa1217920:intron 40.0%
TGGGTATCAAGAACTTATCC+AGG + chr8_1:80458458-80458477 None:intergenic 40.0%
!! TTGTGTGACCTTGTTGGTTT+CGG - chr8_1:80458526-80458545 Msa1217920:intron 40.0%
CTCTTATCCTCTTGCAAAAG+AGG + chr8_1:80458622-80458641 None:intergenic 40.0%
! CTCTTTTGCAAGAGGATAAG+AGG - chr8_1:80458620-80458639 Msa1217920:intron 40.0%
!!! TTTTTGGCTAGTGACTAGTG+AGG - chr8_1:80458931-80458950 Msa1217920:intron 40.0%
TGATGCTGTGGATCTGAATA+TGG - chr8_1:80458998-80459017 Msa1217920:intron 40.0%
GCTTGTCAAGTTACAAGAGA+AGG - chr8_1:80459024-80459043 Msa1217920:intron 40.0%
TGAGATGATCTTCTTTCCTG+TGG - chr8_1:80459054-80459073 Msa1217920:intron 40.0%
TGACTACAATACCTTCATCG+AGG + chr8_1:80459099-80459118 None:intergenic 40.0%
TATTGCTGCTATCATGGGAA+TGG - chr8_1:80459135-80459154 Msa1217920:intron 40.0%
ATTGCTGCTATCATGGGAAT+GGG - chr8_1:80459136-80459155 Msa1217920:intron 40.0%
ATTTCCAGGACAAACCTGTA+AGG + chr8_1:80459169-80459188 None:intergenic 40.0%
TTGGGATTGAAATTCTCCAG+GGG - chr8_1:80459230-80459249 Msa1217920:intron 40.0%
GAGAAATGGTCAGAGTTGTA+TGG - chr8_1:80459308-80459327 Msa1217920:intron 40.0%
AAGCATAGGTTACTAACCAG+AGG + chr8_1:80459386-80459405 None:intergenic 40.0%
CATACCTGTCGTACTATTCT+AGG - chr8_1:80459427-80459446 Msa1217920:intron 40.0%
GAATCCTAGAATAGTACGAC+AGG + chr8_1:80459434-80459453 None:intergenic 40.0%
ATTATCAATTGGTCACTGGC+TGG - chr8_1:80459467-80459486 Msa1217920:intron 40.0%
! TTATCAATTGGTCACTGGCT+GGG - chr8_1:80459468-80459487 Msa1217920:intron 40.0%
! TTGTCAGTGAAGTGTCTTGT+CGG + chr8_1:80459600-80459619 None:intergenic 40.0%
GACATCAATTCTACTTGCCA+AGG + chr8_1:80459750-80459769 None:intergenic 40.0%
GTCCGTAATTCATGTTGGAA+TGG + chr8_1:80459990-80460009 None:intergenic 40.0%
GAAAATAAGGGGTTACTGTG+TGG - chr8_1:80460370-80460389 Msa1217920:intron 40.0%
GTAACAACAAACACAGCCAA+GGG + chr8_1:80460744-80460763 None:intergenic 40.0%
AGTAACAACAAACACAGCCA+AGG + chr8_1:80460745-80460764 None:intergenic 40.0%
! AATGCACCGGTAAACTTATG+AGG + chr8_1:80460868-80460887 None:intergenic 40.0%
TTGCTGCAGACCACTAATAA+TGG - chr8_1:80460886-80460905 Msa1217920:intron 40.0%
TCAACAGGTTGTACCTTGTA+AGG + chr8_1:80461185-80461204 None:intergenic 40.0%
! AGTTTTCAGTAGATTGTGGC+GGG + chr8_1:80461235-80461254 None:intergenic 40.0%
! CAGTTTTCAGTAGATTGTGG+CGG + chr8_1:80461236-80461255 None:intergenic 40.0%
ATTGACGGGAGGATTGATGA+TGG + chr8_1:80453011-80453030 None:intergenic 45.0%
TGCTACACAGGTATTCCCTT+TGG - chr8_1:80453296-80453315 Msa1217920:three_prime_UTR 45.0%
GGTGGTCTTCAAGAGTCAAA+AGG - chr8_1:80454530-80454549 Msa1217920:intron 45.0%
GACGCTCTGTATGAATGTAG+GGG + chr8_1:80454621-80454640 None:intergenic 45.0%
GGACGCTCTGTATGAATGTA+GGG + chr8_1:80454622-80454641 None:intergenic 45.0%
TGGACGCTCTGTATGAATGT+AGG + chr8_1:80454623-80454642 None:intergenic 45.0%
! ATACAGAGCGTCCAAAACCT+GGG - chr8_1:80454629-80454648 Msa1217920:intron 45.0%
! ATCGATATCCACCCAGGTTT+TGG + chr8_1:80454643-80454662 None:intergenic 45.0%
TCAACTGCAACTGCTCAACT+AGG - chr8_1:80454934-80454953 Msa1217920:CDS 45.0%
CTTCAGCTTGGGATAATTCC+TGG - chr8_1:80454967-80454986 Msa1217920:CDS 45.0%
GGGATAATTCCTGGATTTGG+AGG - chr8_1:80454976-80454995 Msa1217920:CDS 45.0%
AAAGTTCGTACCTGAGGTGA+TGG - chr8_1:80455458-80455477 Msa1217920:CDS 45.0%
AGTTTGACCATGAGTAGCAG+TGG - chr8_1:80455547-80455566 Msa1217920:intron 45.0%
TTTGTCAGACCAACAAGACG+AGG + chr8_1:80455663-80455682 None:intergenic 45.0%
! TCGTCTTGTTGGTCTGACAA+AGG - chr8_1:80455662-80455681 Msa1217920:CDS 45.0%
ACCGGATCTATCCAATTTCG+TGG - chr8_1:80455772-80455791 Msa1217920:CDS 45.0%
TCCAATTTCGTGGTTGGACT+TGG - chr8_1:80455782-80455801 Msa1217920:CDS 45.0%
AAGACTTCCAAGCCAGTGAA+AGG - chr8_1:80455993-80456012 Msa1217920:CDS 45.0%
TTCCAAGCCAGTGAAAGGAA+AGG - chr8_1:80455998-80456017 Msa1217920:CDS 45.0%
! ATCCTTTCCTTTCACTGGCT+TGG + chr8_1:80456003-80456022 None:intergenic 45.0%
! TTTAGTTCGGGGCTTGTAGA+TGG - chr8_1:80456026-80456045 Msa1217920:CDS 45.0%
GCAGTGTTCATCAACTGATC+AGG + chr8_1:80456062-80456081 None:intergenic 45.0%
TCGACGGTCCAAAATATCCA+GGG + chr8_1:80456096-80456115 None:intergenic 45.0%
ACCAGAGGATGCTTGAGATT+GGG + chr8_1:80456221-80456240 None:intergenic 45.0%
AACCAGAGGATGCTTGAGAT+TGG + chr8_1:80456222-80456241 None:intergenic 45.0%
! AGCTGAAGCATTTGATGCAC+TGG - chr8_1:80456383-80456402 Msa1217920:intron 45.0%
CACATTTCTTCCCCTTCAAG+TGG - chr8_1:80456495-80456514 Msa1217920:CDS 45.0%
ACTAGTTCCACAGTCAACAG+GGG + chr8_1:80456687-80456706 None:intergenic 45.0%
! GACTAGTTCCACAGTCAACA+GGG + chr8_1:80456688-80456707 None:intergenic 45.0%
! AGACTAGTTCCACAGTCAAC+AGG + chr8_1:80456689-80456708 None:intergenic 45.0%
! ACTAGTCTCTGCCTAAGTGT+TGG - chr8_1:80456701-80456720 Msa1217920:intron 45.0%
GTCAGGCTAATCCAACACTT+AGG + chr8_1:80456715-80456734 None:intergenic 45.0%
!! AATCCACCAGAAGCACTTTG+TGG + chr8_1:80456737-80456756 None:intergenic 45.0%
ATTTCAAATCCCTGCACTGC+AGG - chr8_1:80456754-80456773 Msa1217920:intron 45.0%
TTGCAAATTGTGCTCCACAG+GGG + chr8_1:80456796-80456815 None:intergenic 45.0%
AGATACAGCCTATTCACACC+AGG + chr8_1:80457187-80457206 None:intergenic 45.0%
AAGGATGGCAACCTTCTTCA+CGG + chr8_1:80457459-80457478 None:intergenic 45.0%
ATCCTTGGTGGAGGACTAAT+GGG - chr8_1:80457473-80457492 Msa1217920:intron 45.0%
CTTTCTTAACACGGCTCTGT+AGG + chr8_1:80457710-80457729 None:intergenic 45.0%
CTACAGAGCCGTGTTAAGAA+AGG - chr8_1:80457708-80457727 Msa1217920:intron 45.0%
TTCATGCTTCATGTTTGGGC+AGG - chr8_1:80457930-80457949 Msa1217920:CDS 45.0%
GATCAGGTCCAAGTCAATTG+TGG + chr8_1:80458046-80458065 None:intergenic 45.0%
!! ACTTGGTCTTTTCTCCGATC+AGG + chr8_1:80458062-80458081 None:intergenic 45.0%
CAGGATACCACCTGAAGAAA+TGG + chr8_1:80458107-80458126 None:intergenic 45.0%
AGTTAGAAAGACACAGCAGC+GGG + chr8_1:80458148-80458167 None:intergenic 45.0%
CAGTTAGAAAGACACAGCAG+CGG + chr8_1:80458149-80458168 None:intergenic 45.0%
AGAAGTGGCATAACATGTGC+AGG + chr8_1:80458195-80458214 None:intergenic 45.0%
! TGCACATGTTATGCCACTTC+TGG - chr8_1:80458194-80458213 Msa1217920:intron 45.0%
GTACGTACAATCTCCAGAAG+TGG + chr8_1:80458210-80458229 None:intergenic 45.0%
TGGAGATTGTACGTACCAAG+CGG - chr8_1:80458214-80458233 Msa1217920:intron 45.0%
GATAAAGAAAACTCCGGTGG+TGG - chr8_1:80458281-80458300 Msa1217920:intron 45.0%
! ACTCTCTTGCTTGTTGAACG+TGG - chr8_1:80458360-80458379 Msa1217920:intron 45.0%
! CCAAATTTGGAATGCCCATG+GGG - chr8_1:80458415-80458434 Msa1217920:intron 45.0%
ACCTTTCAGGAAGTAGCTGT+GGG + chr8_1:80458477-80458496 None:intergenic 45.0%
TGCAGATTGTGTGACCTTGT+TGG - chr8_1:80458520-80458539 Msa1217920:intron 45.0%
! GTTCTGAACAAATTGGGAGC+CGG + chr8_1:80458566-80458585 None:intergenic 45.0%
! GCTTATCCCTCTTTTGCAAG+AGG - chr8_1:80458612-80458631 Msa1217920:intron 45.0%
ACAGGCGAAACAACTCGAAA+AGG - chr8_1:80458772-80458791 Msa1217920:intron 45.0%
CTTTAATTCAGGGTCAGGAC+TGG + chr8_1:80458827-80458846 None:intergenic 45.0%
!! GAGAAAGCTAGGAGCATTTC+CGG - chr8_1:80458856-80458875 Msa1217920:intron 45.0%
CTTCTTTCCTGTGGTGAATG+AGG - chr8_1:80459063-80459082 Msa1217920:intron 45.0%
!! GAATGGGTTTTCCACCTTAC+AGG - chr8_1:80459152-80459171 Msa1217920:intron 45.0%
!! CAGGGGAGGTATCATATTCT+GGG - chr8_1:80459247-80459266 Msa1217920:CDS 45.0%
TAGGCACAAGGCTTGAAGAA+CGG + chr8_1:80459335-80459354 None:intergenic 45.0%
AATTAGGATCTCCCAATGGG+TGG - chr8_1:80460055-80460074 Msa1217920:intron 45.0%
ATTAGGATCTCCCAATGGGT+GGG - chr8_1:80460056-80460075 Msa1217920:intron 45.0%
AACGGTCTGTTGCTCTCTAA+TGG - chr8_1:80460466-80460485 Msa1217920:intron 45.0%
! TTGACTGCAGCAGATTTGCT+TGG - chr8_1:80460668-80460687 Msa1217920:intron 45.0%
GTTTCTTCACTTACAGCCCT+TGG - chr8_1:80460725-80460744 Msa1217920:intron 45.0%
CAAGTAGCAAGATGAGTTGC+AGG - chr8_1:80460926-80460945 Msa1217920:intron 45.0%
AGGTTGTACCTTGTAAGGCA+CGG + chr8_1:80461180-80461199 None:intergenic 45.0%
CTGAAAACTGTTGTCAGGGT+TGG - chr8_1:80461246-80461265 Msa1217920:five_prime_UTR 45.0%
AACTGTTGTCAGGGTTGGAT+TGG - chr8_1:80461251-80461270 Msa1217920:five_prime_UTR 45.0%
ACTGTTGTCAGGGTTGGATT+GGG - chr8_1:80461252-80461271 Msa1217920:five_prime_UTR 45.0%
! GAGTAGCAGAAAAGGGCACA+CGG - chr8_1:80452949-80452968 Msa1217920:three_prime_UTR 50.0%
GGGCACACGGTTATGAATGT+TGG - chr8_1:80452962-80452981 Msa1217920:intron 50.0%
AAGGAGAGAGAATTGACGGG+AGG + chr8_1:80453022-80453041 None:intergenic 50.0%
! ATCATCCATCTGTGTCGCTG+AGG - chr8_1:80453130-80453149 Msa1217920:three_prime_UTR 50.0%
TTTCACCTCAGCGACACAGA+TGG + chr8_1:80453138-80453157 None:intergenic 50.0%
TGGATGGCGATTGACAACAG+AGG - chr8_1:80453822-80453841 Msa1217920:intron 50.0%
TCACGGCATACTGCGGTATT+TGG + chr8_1:80454030-80454049 None:intergenic 50.0%
TGTGGTTTCACGGCATACTG+CGG + chr8_1:80454037-80454056 None:intergenic 50.0%
! CATACAGAGCGTCCAAAACC+TGG - chr8_1:80454628-80454647 Msa1217920:intron 50.0%
CCATCAATGGCAGCAACTGA+GGG + chr8_1:80454783-80454802 None:intergenic 50.0%
TGGGGGCTTAGAAGTTGCAA+TGG - chr8_1:80454815-80454834 Msa1217920:intron 50.0%
GTCTGCCTGAACTTCAGCTT+GGG - chr8_1:80454956-80454975 Msa1217920:CDS 50.0%
TGGTATCAAGCCATCACCTC+AGG + chr8_1:80455471-80455490 None:intergenic 50.0%
AGGACATCCACTGCTACTCA+TGG + chr8_1:80455557-80455576 None:intergenic 50.0%
GAGTAGCAGTGGATGTCCTA+TGG - chr8_1:80455558-80455577 Msa1217920:intron 50.0%
GCCAAGTCCAACCACGAAAT+TGG + chr8_1:80455786-80455805 None:intergenic 50.0%
TTCGGGGCTTGTAGATGGTT+TGG - chr8_1:80456031-80456050 Msa1217920:CDS 50.0%
GTCGACGGTCCAAAATATCC+AGG + chr8_1:80456097-80456116 None:intergenic 50.0%
TGGTAATCCATGGTCGTCGA+CGG + chr8_1:80456112-80456131 None:intergenic 50.0%
! ATCTCTCTAGCTTCCCCAAG+TGG + chr8_1:80456161-80456180 None:intergenic 50.0%
!! GGGAGCTTGTTTTCGAGCTT+GGG + chr8_1:80456201-80456220 None:intergenic 50.0%
!! TGGGAGCTTGTTTTCGAGCT+TGG + chr8_1:80456202-80456221 None:intergenic 50.0%
TCCCAATCTCAAGCATCCTC+TGG - chr8_1:80456217-80456236 Msa1217920:intron 50.0%
TAACCTTCCAGAGACCAGCA+CGG + chr8_1:80456283-80456302 None:intergenic 50.0%
!! ACCAGAAGCACTTTGTGGTC+AGG + chr8_1:80456732-80456751 None:intergenic 50.0%
! TGACCACAAAGTGCTTCTGG+TGG - chr8_1:80456731-80456750 Msa1217920:intron 50.0%
AATCCCTGCACTGCAGGTAA+AGG - chr8_1:80456760-80456779 Msa1217920:intron 50.0%
TGACCTTTACCTGCAGTGCA+GGG + chr8_1:80456766-80456785 None:intergenic 50.0%
CTTGGGGCTATAAAACCAGG+TGG - chr8_1:80456947-80456966 Msa1217920:intron 50.0%
ATGGTTGCAATGCTTAGGCC+TGG - chr8_1:80457166-80457185 Msa1217920:intron 50.0%
TGCTTAGGCCTGGTGTGAAT+AGG - chr8_1:80457176-80457195 Msa1217920:intron 50.0%
GGTTCCAAGATCCGTGAAGA+AGG - chr8_1:80457445-80457464 Msa1217920:intron 50.0%
GCAACCTTCTTCACGGATCT+TGG + chr8_1:80457452-80457471 None:intergenic 50.0%
GTGAAGAAGGTTGCCATCCT+TGG - chr8_1:80457458-80457477 Msa1217920:intron 50.0%
AAGAAGGTTGCCATCCTTGG+TGG - chr8_1:80457461-80457480 Msa1217920:intron 50.0%
CATTAGTCCTCCACCAAGGA+TGG + chr8_1:80457474-80457493 None:intergenic 50.0%
CATCCTTGGTGGAGGACTAA+TGG - chr8_1:80457472-80457491 Msa1217920:intron 50.0%
TTGGAGCCCATTTCTTCAGG+TGG - chr8_1:80458097-80458116 Msa1217920:intron 50.0%
TACTTGAGGAGATGTCCGCT+TGG + chr8_1:80458232-80458251 None:intergenic 50.0%
! AAGAAAACTCCGGTGGTGGT+TGG - chr8_1:80458285-80458304 Msa1217920:intron 50.0%
GTACAGTTTCCAACCACCAC+CGG + chr8_1:80458297-80458316 None:intergenic 50.0%
GTGGTGGTTGGAAACTGTAC+AGG - chr8_1:80458297-80458316 Msa1217920:intron 50.0%
CCCCATGGGCATTCCAAATT+TGG + chr8_1:80458418-80458437 None:intergenic 50.0%
ACCCACAGCTACTTCCTGAA+AGG - chr8_1:80458473-80458492 Msa1217920:intron 50.0%
GACCTTTCAGGAAGTAGCTG+TGG + chr8_1:80458478-80458497 None:intergenic 50.0%
!! TGACCTTGTTGGTTTCGGTG+TGG - chr8_1:80458531-80458550 Msa1217920:intron 50.0%
TTGCAAGAGGATAAGAGGGC+TGG - chr8_1:80458625-80458644 Msa1217920:intron 50.0%
CATTGGATCAACGGAGACAC+CGG + chr8_1:80458878-80458897 None:intergenic 50.0%
CAGATCCACAGCATCAGATC+CGG + chr8_1:80458994-80459013 None:intergenic 50.0%
TCCACCTTACAGGTTTGTCC+TGG - chr8_1:80459162-80459181 Msa1217920:intron 50.0%
TCCAGGACAAACCTGTAAGG+TGG + chr8_1:80459166-80459185 None:intergenic 50.0%
GGATTGAAATTCTCCAGGGG+AGG - chr8_1:80459233-80459252 Msa1217920:CDS 50.0%
CCAGAATATGATACCTCCCC+TGG + chr8_1:80459249-80459268 None:intergenic 50.0%
!! CCAGGGGAGGTATCATATTC+TGG - chr8_1:80459246-80459265 Msa1217920:CDS 50.0%
! ATATTCTGGGCCGACTCTCT+TGG - chr8_1:80459260-80459279 Msa1217920:CDS 50.0%
! CTTCAAGCCTTGTGCCTACT+TGG - chr8_1:80459337-80459356 Msa1217920:intron 50.0%
AGCTGCGAAAGGAATTCCTC+TGG - chr8_1:80459367-80459386 Msa1217920:intron 50.0%
GCGGATCTTGCTAGAGTGAT+AGG - chr8_1:80459522-80459541 Msa1217920:CDS 50.0%
! CAGTGAAGTGTCTTGTCGGT+CGG + chr8_1:80459596-80459615 None:intergenic 50.0%
TTAGGATCTCCCAATGGGTG+GGG - chr8_1:80460057-80460076 Msa1217920:intron 50.0%
TTTATCCCTCGAAGGGTCGA+AGG + chr8_1:80460128-80460147 None:intergenic 50.0%
TTTATTGCAGGGAGCCTCAG+TGG - chr8_1:80460500-80460519 Msa1217920:intron 50.0%
!! TGACTTAGCTTGCTCCACTG+AGG + chr8_1:80460517-80460536 None:intergenic 50.0%
CAGTGGAGCAAGCTAAGTCA+CGG - chr8_1:80460517-80460536 Msa1217920:intron 50.0%
GCAAGCTAAGTCACGGATGT+AGG - chr8_1:80460524-80460543 Msa1217920:intron 50.0%
AATGCTAGCCGTGCCTTACA+AGG - chr8_1:80461169-80461188 Msa1217920:five_prime_UTR 50.0%
CCCTCAGTTGCTGCCATTGA+TGG - chr8_1:80454780-80454799 Msa1217920:CDS 55.0%
GCCATCAATGGCAGCAACTG+AGG + chr8_1:80454784-80454803 None:intergenic 55.0%
! TGCCATTGATGGCCTTGCCT+TGG - chr8_1:80454791-80454810 Msa1217920:CDS 55.0%
! GCCATTGATGGCCTTGCCTT+GGG - chr8_1:80454792-80454811 Msa1217920:CDS 55.0%
ACCCAAGGCAAGGCCATCAA+TGG + chr8_1:80454796-80454815 None:intergenic 55.0%
! ATTGATGGCCTTGCCTTGGG+TGG - chr8_1:80454795-80454814 Msa1217920:CDS 55.0%
! TTGATGGCCTTGCCTTGGGT+GGG - chr8_1:80454796-80454815 Msa1217920:CDS 55.0%
AACTTCTAAGCCCCCACCCA+AGG + chr8_1:80454811-80454830 None:intergenic 55.0%
GGTCTGCCTGAACTTCAGCT+TGG - chr8_1:80454955-80454974 Msa1217920:CDS 55.0%
GTTGAATGACTGGGTCACCG+AGG - chr8_1:80455373-80455392 Msa1217920:intron 55.0%
CAGCGACTTCCTCGTCTTGT+TGG - chr8_1:80455651-80455670 Msa1217920:CDS 55.0%
TGATGAACACTGCACGCCAG+TGG - chr8_1:80456069-80456088 Msa1217920:CDS 55.0%
GATGAACACTGCACGCCAGT+GGG - chr8_1:80456070-80456089 Msa1217920:CDS 55.0%
CCAAAATATCCAGGGCCCAC+TGG + chr8_1:80456088-80456107 None:intergenic 55.0%
! CCAGTGGGCCCTGGATATTT+TGG - chr8_1:80456085-80456104 Msa1217920:CDS 55.0%
! TTTTGGACCGTCGACGACCA+TGG - chr8_1:80456102-80456121 Msa1217920:intron 55.0%
AACCTTCCAGAGACCAGCAC+GGG + chr8_1:80456282-80456301 None:intergenic 55.0%
AGTTCCACAGTCAACAGGGG+TGG + chr8_1:80456684-80456703 None:intergenic 55.0%
! GCCTGACCACAAAGTGCTTC+TGG - chr8_1:80456728-80456747 Msa1217920:intron 55.0%
GTGACCTTTACCTGCAGTGC+AGG + chr8_1:80456767-80456786 None:intergenic 55.0%
ATTGTGCTCCACAGGGGCTA+GGG + chr8_1:80456790-80456809 None:intergenic 55.0%
AATTGTGCTCCACAGGGGCT+AGG + chr8_1:80456791-80456810 None:intergenic 55.0%
! TCTTGGCTTGAACAGGTGCC+TGG - chr8_1:80457404-80457423 Msa1217920:intron 55.0%
! CTTGGCTTGAACAGGTGCCT+GGG - chr8_1:80457405-80457424 Msa1217920:intron 55.0%
! TTGGCTTGAACAGGTGCCTG+GGG - chr8_1:80457406-80457425 Msa1217920:intron 55.0%
AGACCACGATCAGTAACCCC+AGG + chr8_1:80457425-80457444 None:intergenic 55.0%
TGGGGTTACTGATCGTGGTC+TGG - chr8_1:80457424-80457443 Msa1217920:intron 55.0%
AAGGTTGCCATCCTTGGTGG+AGG - chr8_1:80457464-80457483 Msa1217920:intron 55.0%
AGCCCATTAGTCCTCCACCA+AGG + chr8_1:80457478-80457497 None:intergenic 55.0%
GAATGCCCATGGGGCCTTTA+AGG - chr8_1:80458424-80458443 Msa1217920:intron 55.0%
!! CCTTGTTGGTTTCGGTGTGG+CGG - chr8_1:80458534-80458553 Msa1217920:intron 55.0%
CGGTGTCTCCGTTGATCCAA+TGG - chr8_1:80458876-80458895 Msa1217920:intron 55.0%
TTCCACCGGATCTGATGCTG+TGG - chr8_1:80458986-80459005 Msa1217920:intron 55.0%
ATCCACAGCATCAGATCCGG+TGG + chr8_1:80458991-80459010 None:intergenic 55.0%
CGACAAGCCTCATTCACCAC+AGG + chr8_1:80459073-80459092 None:intergenic 55.0%
GCTTGTCGTGTCCTCGATGA+AGG - chr8_1:80459085-80459104 Msa1217920:CDS 55.0%
CTTGCAGCCAAGTAGGCACA+AGG + chr8_1:80459347-80459366 None:intergenic 55.0%
TTGGCTGCAAGAGCTGCGAA+AGG - chr8_1:80459356-80459375 Msa1217920:intron 55.0%
! CAATTGGTCACTGGCTGGGT+AGG - chr8_1:80459472-80459491 Msa1217920:intron 55.0%
TACATGCCTTCGACCCTTCG+AGG - chr8_1:80460119-80460138 Msa1217920:intron 55.0%
ACATGCCTTCGACCCTTCGA+GGG - chr8_1:80460120-80460139 Msa1217920:intron 55.0%
AGTGGTCTGCAGCAATGCAC+CGG + chr8_1:80460881-80460900 None:intergenic 55.0%
!! TGTGGCGGGTGAAGCTATGA+TGG + chr8_1:80461221-80461240 None:intergenic 55.0%
! CAGAGCGTCCAAAACCTGGG+TGG - chr8_1:80454632-80454651 Msa1217920:intron 60.0%
! TGATGGCCTTGCCTTGGGTG+GGG - chr8_1:80454797-80454816 Msa1217920:CDS 60.0%
ATAGTGTCTGGTCCCCGTGC+TGG - chr8_1:80456266-80456285 Msa1217920:CDS 60.0%
ACCTTCCAGAGACCAGCACG+GGG + chr8_1:80456281-80456300 None:intergenic 60.0%
CCACAGTCAACAGGGGTGGT+GGG + chr8_1:80456680-80456699 None:intergenic 60.0%
TCCACAGTCAACAGGGGTGG+TGG + chr8_1:80456681-80456700 None:intergenic 60.0%
TTGTGCTCCACAGGGGCTAG+GGG + chr8_1:80456789-80456808 None:intergenic 60.0%
GTGCCTGGGGTTACTGATCG+TGG - chr8_1:80457419-80457438 Msa1217920:intron 60.0%
!! GGTGGAGGACTAATGGGCTC+TGG - chr8_1:80457479-80457498 Msa1217920:intron 60.0%
CCGCCACACCGAAACCAACA+AGG + chr8_1:80458537-80458556 None:intergenic 60.0%
! TTCGGTGTGGCGGTTGCAAC+CGG - chr8_1:80458544-80458563 Msa1217920:intron 60.0%
CGCAGCTCTTGCAGCCAAGT+AGG + chr8_1:80459354-80459373 None:intergenic 60.0%
GATCTCCCAATGGGTGGGGT+GGG - chr8_1:80460061-80460080 Msa1217920:intron 60.0%
ATCTCCCAATGGGTGGGGTG+GGG - chr8_1:80460062-80460081 Msa1217920:intron 60.0%
! GATGGCCTTGCCTTGGGTGG+GGG - chr8_1:80454798-80454817 Msa1217920:CDS 65.0%
CTAAGCCCCCACCCAAGGCA+AGG + chr8_1:80454806-80454825 None:intergenic 65.0%
! TCCCCGTGCTGGTCTCTGGA+AGG - chr8_1:80456277-80456296 Msa1217920:CDS 65.0%
! CCCACCACCCCTGTTGACTG+TGG - chr8_1:80456677-80456696 Msa1217920:intron 65.0%
AAGGTCACCCCTAGCCCCTG+TGG - chr8_1:80456779-80456798 Msa1217920:intron 65.0%
GGATCTCCCAATGGGTGGGG+TGG - chr8_1:80460060-80460079 Msa1217920:intron 65.0%
GATGCCCCACCCCACCCATT+GGG + chr8_1:80460069-80460088 None:intergenic 65.0%
AGATGCCCCACCCCACCCAT+TGG + chr8_1:80460070-80460089 None:intergenic 65.0%
! CTGGTCCCCGTGCTGGTCTC+TGG - chr8_1:80456273-80456292 Msa1217920:CDS 70.0%
CACTGCACGCCAGTGGGCCC+TGG - chr8_1:80456076-80456095 Msa1217920:CDS 75.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 80452794 80461275 80452794 ID=Msa1217920;Name=Msa1217920
chr8_1 mRNA 80452794 80461275 80452794 ID=Msa1217920-mRNA-1;Parent=Msa1217920;Name=Msa1217920-mRNA-1;_AED=0.09;_eAED=0.09;_QI=153|1|1|1|0.94|0.89|19|606|723
chr8_1 exon 80452794 80452978 80452794 ID=Msa1217920-mRNA-1:exon:28215;Parent=Msa1217920-mRNA-1
chr8_1 exon 80453103 80453559 80453103 ID=Msa1217920-mRNA-1:exon:28214;Parent=Msa1217920-mRNA-1
chr8_1 exon 80454681 80454819 80454681 ID=Msa1217920-mRNA-1:exon:28213;Parent=Msa1217920-mRNA-1
chr8_1 exon 80454896 80455044 80454896 ID=Msa1217920-mRNA-1:exon:28212;Parent=Msa1217920-mRNA-1
chr8_1 exon 80455172 80455293 80455172 ID=Msa1217920-mRNA-1:exon:28211;Parent=Msa1217920-mRNA-1
chr8_1 exon 80455423 80455544 80455423 ID=Msa1217920-mRNA-1:exon:28210;Parent=Msa1217920-mRNA-1
chr8_1 exon 80455624 80455878 80455624 ID=Msa1217920-mRNA-1:exon:28209;Parent=Msa1217920-mRNA-1
chr8_1 exon 80455954 80456117 80455954 ID=Msa1217920-mRNA-1:exon:28208;Parent=Msa1217920-mRNA-1
chr8_1 exon 80456245 80456366 80456245 ID=Msa1217920-mRNA-1:exon:28207;Parent=Msa1217920-mRNA-1
chr8_1 exon 80456476 80456650 80456476 ID=Msa1217920-mRNA-1:exon:28206;Parent=Msa1217920-mRNA-1
chr8_1 exon 80457602 80457688 80457602 ID=Msa1217920-mRNA-1:exon:28205;Parent=Msa1217920-mRNA-1
chr8_1 exon 80457771 80458073 80457771 ID=Msa1217920-mRNA-1:exon:28204;Parent=Msa1217920-mRNA-1
chr8_1 exon 80458368 80458423 80458368 ID=Msa1217920-mRNA-1:exon:28203;Parent=Msa1217920-mRNA-1
chr8_1 exon 80459072 80459153 80459072 ID=Msa1217920-mRNA-1:exon:28202;Parent=Msa1217920-mRNA-1
chr8_1 exon 80459233 80459300 80459233 ID=Msa1217920-mRNA-1:exon:28201;Parent=Msa1217920-mRNA-1
chr8_1 exon 80459381 80459434 80459381 ID=Msa1217920-mRNA-1:exon:28200;Parent=Msa1217920-mRNA-1
chr8_1 exon 80459518 80459583 80459518 ID=Msa1217920-mRNA-1:exon:28199;Parent=Msa1217920-mRNA-1
chr8_1 exon 80459831 80459902 80459831 ID=Msa1217920-mRNA-1:exon:28198;Parent=Msa1217920-mRNA-1
chr8_1 exon 80461023 80461275 80461023 ID=Msa1217920-mRNA-1:exon:28197;Parent=Msa1217920-mRNA-1
chr8_1 five_prime_UTR 80461123 80461275 80461123 ID=Msa1217920-mRNA-1:five_prime_utr;Parent=Msa1217920-mRNA-1
chr8_1 CDS 80461023 80461122 80461023 ID=Msa1217920-mRNA-1:cds;Parent=Msa1217920-mRNA-1
chr8_1 CDS 80459831 80459902 80459831 ID=Msa1217920-mRNA-1:cds;Parent=Msa1217920-mRNA-1
chr8_1 CDS 80459518 80459583 80459518 ID=Msa1217920-mRNA-1:cds;Parent=Msa1217920-mRNA-1
chr8_1 CDS 80459381 80459434 80459381 ID=Msa1217920-mRNA-1:cds;Parent=Msa1217920-mRNA-1
chr8_1 CDS 80459233 80459300 80459233 ID=Msa1217920-mRNA-1:cds;Parent=Msa1217920-mRNA-1
chr8_1 CDS 80459072 80459153 80459072 ID=Msa1217920-mRNA-1:cds;Parent=Msa1217920-mRNA-1
chr8_1 CDS 80458368 80458423 80458368 ID=Msa1217920-mRNA-1:cds;Parent=Msa1217920-mRNA-1
chr8_1 CDS 80457771 80458073 80457771 ID=Msa1217920-mRNA-1:cds;Parent=Msa1217920-mRNA-1
chr8_1 CDS 80457602 80457688 80457602 ID=Msa1217920-mRNA-1:cds;Parent=Msa1217920-mRNA-1
chr8_1 CDS 80456476 80456650 80456476 ID=Msa1217920-mRNA-1:cds;Parent=Msa1217920-mRNA-1
chr8_1 CDS 80456245 80456366 80456245 ID=Msa1217920-mRNA-1:cds;Parent=Msa1217920-mRNA-1
chr8_1 CDS 80455954 80456117 80455954 ID=Msa1217920-mRNA-1:cds;Parent=Msa1217920-mRNA-1
chr8_1 CDS 80455624 80455878 80455624 ID=Msa1217920-mRNA-1:cds;Parent=Msa1217920-mRNA-1
chr8_1 CDS 80455423 80455544 80455423 ID=Msa1217920-mRNA-1:cds;Parent=Msa1217920-mRNA-1
chr8_1 CDS 80455172 80455293 80455172 ID=Msa1217920-mRNA-1:cds;Parent=Msa1217920-mRNA-1
chr8_1 CDS 80454896 80455044 80454896 ID=Msa1217920-mRNA-1:cds;Parent=Msa1217920-mRNA-1
chr8_1 CDS 80454681 80454819 80454681 ID=Msa1217920-mRNA-1:cds;Parent=Msa1217920-mRNA-1
chr8_1 CDS 80453524 80453559 80453524 ID=Msa1217920-mRNA-1:cds;Parent=Msa1217920-mRNA-1
chr8_1 three_prime_UTR 80453103 80453523 80453103 ID=Msa1217920-mRNA-1:three_prime_utr;Parent=Msa1217920-mRNA-1
chr8_1 three_prime_UTR 80452794 80452978 80452794 ID=Msa1217920-mRNA-1:three_prime_utr;Parent=Msa1217920-mRNA-1
Gene Sequence

>Msa1217920

ATGAGTAGCAGAAAAGGGCACACGGTTATGAATGTTGGAGCTGATGGAGTTGCCATCATCACCATCATCAATCCTCCCGTCAATTCTCTCTCCTTTGATGTATTGCGAAGTTTAAAGGAGAGTTTTGATCAGGCTATACAAAGAGATGACGTCAAGGCAATTGTTGTTACAGGTGCAAAGGGAAAATTTTCTGGAGGTTTTGATATTTCTGCATTTGGTGGTCTTCAAGAGTCAAAAGAGCGTCCAAAACCTGGGTGGATATCGATTGAAATCATCACTGATACAATAGAAGCGGCAAAGAAACCCTCAGTTGCTGCCATTGATGGCCTTGCCTTGGGTGGGGGCTTAGAAGTTGCAATGGCATGCAACGCACGATTATCAACTGCAACTGCTCAACTAGGTCTGCCTGAACTTCAGCTTGGGATAATTCCTGGATTTGGAGGAACACAGCGACTTCCTCGTCTTGTTGGTCTGACAAAGGCACTTGAAATGATGTTGACTTCCAAGCCAGTGAAAGGAAAGGATGCTTTTAGTTCGGGGCTTGTAGATGGTTTGGTGTCACCTGATCAGTTGATGAACACTGCACGCCAGTGGGCCCTGGATATTTTGGACCGTCGACGACCATGGATTACCAGTCTTTTCAAGACTGAAAAAATAGAACCACTTGGGGAAGCTAGAGAGATTTTGAAATTCGCACGTGCCCAAGCTCGAAAACAAGCTCCCAATCTCAAGCATCCTCTGGTTTGCATTGATGTTATTGAAGCAGGAATAGTGTCTGGTCCCCGTGCTGGTCTCTGGAAGGAAGCTGAAGCATTTGATGCACTGGTACAATCAGATACTTGCAAAAGCTTAATTCACATATTTTTTGCTCAAAGAGGAACATCTAAGGTGCCTGGGGTTACTGATCGTGGTCTGGTTCCAAGATCCGTGAAGAAGGTTGCCATCCTTGGTGGAGGACTAATGGGCTCTGGAATAGCAACAGCTTTAATACTTAGTAATTATTCTGTCATATTGAAAGAAGTAAATGAAAAATTCTTGGATGCTGGTATCAATAGGATTAAAGCAAACCTACAGAGCCGTGTTAAGAAAGGTAATTTAACCCAGGAAAAATTTGAAAAGGCATTCTCTCTTGTCAAAGGTTCCCTCGACTATGATAGCTTCAGAGATGTAGACATGGTGATAGAGGCTGTTATTGAGAATGTTTCCTTGAAGCAACAAATCTTTGCTGATCTTGAAAAGTACTGTCCACCTCATTGTATACTTGGTAGTAACACTTCCACAATTGACTTGGACCTGATCGGAGAAAAGACCAAGTCTCAAGATCGAATTATTGGAGCCCATTTCTTCAGTCCTGCACATGTTATGCCACTTCTGGAGATTGTACGTACCAAGCGGACATCTCCTCAAGTAATAGTTGACTTGTTAGATATTTCAAAGAAGATAAAGAAAACTCCGGTGGTGGTTGGAAACTGTACAGGATTTGCTGTTAATAGGGTGTTCTTCCCATATACACAAGCAACTCTCTTGCTTGTTGAACGTGGCGCAGATGTTTACCAAATTGATAAAGCAGTAACCAAATTTGGAATGCCCATGGGGCCTTTAAGATTGTGTGACCTTGTTGGTTTCGGTGTGGCGGTTGCAACCGGCTCCCAATTTGTTCAGAACTTTCCTGAGCGAACTTATAAATCAATGCTTATCCCTCTTTTGCAAGAGGATAAGAGGGCTGGCGAAACAACTCGAAAAGGCTTTTATTTGTATGATGATAGACGCAAGGCCAGTCCTGACCCTGAATTAAAGAAATTTATTGAGAAAGCTAGGAGCATTTCCGGTGTCTCCGTTGATCCAATGCTTGTCAAGTTACAAGAGAAGGACATCATTGAGATGATCTTCTTTCCTGTGGTGAATGAGGCTTGTCGTGTCCTCGATGAAGGTATTGTAGTCAAAGCAGCAGATCTTGATATTGCTGCTATCATGGGAATGGGTTTTCCACCTTACAGGGGAGGTATCATATTCTGGGCCGACTCTCTTGGATCTAAATACATATATTCAAGATTGGAGAAATGGTCAGAGTTGTATGGACCGTTCTTCAAGCCTTGTGCCTACTTGGCTGCAAGAGCTGCGAAAGGAATTCCTCTGGGAGCCTCAGTGGAGCAAGCTAAGTCACGGATGTAG
Protein sequence

>Msa1217920

MSSRKGHTVMNVGADGVAIITIINPPVNSLSFDVLRSLKESFDQAIQRDDVKAIVVTGAKGKFSGGFDISAFGGLQESKERPKPGWISIEIITDTIEAAKKPSVAAIDGLALGGGLEVAMACNARLSTATAQLGLPELQLGIIPGFGGTQRLPRLVGLTKALEMMLTSKPVKGKDAFSSGLVDGLVSPDQLMNTARQWALDILDRRRPWITSLFKTEKIEPLGEAREILKFARAQARKQAPNLKHPLVCIDVIEAGIVSGPRAGLWKEAEAFDALVQSDTCKSLIHIFFAQRGTSKVPGVTDRGLVPRSVKKVAILGGGLMGSGIATALILSNYSVILKEVNEKFLDAGINRIKANLQSRVKKGNLTQEKFEKAFSLVKGSLDYDSFRDVDMVIEAVIENVSLKQQIFADLEKYCPPHCILGSNTSTIDLDLIGEKTKSQDRIIGAHFFSPAHVMPLLEIVRTKRTSPQVIVDLLDISKKIKKTPVVVGNCTGFAVNRVFFPYTQATLLLVERGADVYQIDKAVTKFGMPMGPLRLCDLVGFGVAVATGSQFVQNFPERTYKSMLIPLLQEDKRAGETTRKGFYLYDDRRKASPDPELKKFIEKARSISGVSVDPMLVKLQEKDIIEMIFFPVVNEACRVLDEGIVVKAADLDIAAIMGMGFPPYRGGIIFWADSLGSKYIYSRLEKWSELYGPFFKPCAYLAARAAKGIPLGASVEQAKSRM*