Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0483220 | KYP51010.1 | 78.512 | 242 | 34 | 2 | 1 | 225 | 52 | 292 | 5.26e-107 | 321 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0483220 | sp|O22315|SR34_ARATH | 58.203 | 256 | 95 | 3 | 1 | 248 | 52 | 303 | 1.68e-69 | 219 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0483220 | A0A151S881 | 78.512 | 242 | 34 | 2 | 1 | 225 | 52 | 292 | 2.51e-107 | 321 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0483220 | Msa1126780 | 0.821836 | 3.266840e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0483220 | MtrunA17_Chr7g0269331 | 93.367 | 196 | 11 | 1 | 1 | 194 | 52 | 247 | 6.54e-107 | 311 |
| Msa0483220 | MtrunA17_Chr1g0195251 | 79.894 | 189 | 38 | 0 | 1 | 189 | 52 | 240 | 4.45e-91 | 276 |
| Msa0483220 | MtrunA17_Chr1g0192221 | 66.981 | 212 | 63 | 3 | 1 | 209 | 83 | 290 | 1.08e-75 | 231 |
| Msa0483220 | MtrunA17_Chr7g0272311 | 75.862 | 145 | 33 | 1 | 1 | 145 | 52 | 194 | 2.60e-66 | 207 |
| Msa0483220 | MtrunA17_Chr3g0127781 | 65.101 | 149 | 40 | 1 | 1 | 137 | 52 | 200 | 2.95e-58 | 186 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0483220 | AT1G02840.1 | 58.203 | 256 | 95 | 3 | 1 | 248 | 52 | 303 | 1.71e-70 | 219 |
| Msa0483220 | AT1G02840.4 | 67.317 | 205 | 57 | 2 | 1 | 197 | 52 | 254 | 8.29e-70 | 216 |
| Msa0483220 | AT1G02840.5 | 67.317 | 205 | 57 | 2 | 1 | 197 | 52 | 254 | 8.29e-70 | 216 |
| Msa0483220 | AT1G02840.3 | 67.317 | 205 | 57 | 2 | 1 | 197 | 52 | 254 | 8.29e-70 | 216 |
| Msa0483220 | AT1G02840.2 | 67.317 | 205 | 57 | 2 | 1 | 197 | 52 | 254 | 1.64e-69 | 216 |
| Msa0483220 | AT1G09140.3 | 71.034 | 145 | 40 | 1 | 1 | 145 | 52 | 194 | 2.71e-63 | 198 |
| Msa0483220 | AT1G09140.1 | 71.034 | 145 | 40 | 1 | 1 | 145 | 52 | 194 | 4.31e-63 | 199 |
| Msa0483220 | AT1G09140.2 | 71.034 | 145 | 40 | 1 | 1 | 145 | 52 | 194 | 5.64e-63 | 198 |
| Msa0483220 | AT4G02430.3 | 69.863 | 146 | 32 | 2 | 1 | 137 | 52 | 194 | 2.62e-58 | 186 |
| Msa0483220 | AT4G02430.2 | 69.863 | 146 | 32 | 2 | 1 | 137 | 50 | 192 | 5.34e-58 | 186 |
| Msa0483220 | AT4G02430.4 | 69.863 | 146 | 32 | 2 | 1 | 137 | 52 | 194 | 5.59e-58 | 186 |
| Msa0483220 | AT3G49430.2 | 62.838 | 148 | 44 | 1 | 1 | 137 | 52 | 199 | 3.35e-56 | 182 |
| Msa0483220 | AT3G49430.5 | 62.838 | 148 | 44 | 1 | 1 | 137 | 52 | 199 | 4.01e-56 | 182 |
| Msa0483220 | AT3G49430.4 | 62.838 | 148 | 44 | 1 | 1 | 137 | 52 | 199 | 4.01e-56 | 182 |
| Msa0483220 | AT3G49430.7 | 62.838 | 148 | 44 | 1 | 1 | 137 | 52 | 199 | 4.01e-56 | 182 |
| Msa0483220 | AT3G49430.1 | 62.838 | 148 | 44 | 1 | 1 | 137 | 52 | 199 | 4.01e-56 | 182 |
| Msa0483220 | AT3G49430.3 | 62.838 | 148 | 44 | 1 | 1 | 137 | 52 | 199 | 4.01e-56 | 182 |
| Msa0483220 | AT3G49430.6 | 62.838 | 148 | 44 | 1 | 1 | 137 | 52 | 199 | 4.01e-56 | 182 |
| Msa0483220 | AT4G02430.1 | 69.600 | 125 | 29 | 1 | 1 | 116 | 52 | 176 | 3.43e-49 | 160 |
Find 93 sgRNAs with CRISPR-Local
Find 315 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGCTGAGAAATACTTATT+TGG | 0.134144 | 3_3:+91110570 | Msa0483220:three_prime_UTR |
| CATACTGGAAATTGGAAATT+AGG | 0.197473 | 3_3:+91109309 | Msa0483220:CDS |
| AACTATTTGGTTCCTTGTTT+GGG | 0.257498 | 3_3:+91110711 | Msa0483220:three_prime_UTR |
| GAACTATTTGGTTCCTTGTT+TGG | 0.265914 | 3_3:+91110710 | Msa0483220:three_prime_UTR |
| ATTAGGGACTTGGTGGGATT+TGG | 0.289557 | 3_3:+91109326 | Msa0483220:CDS |
| TAGTAGATTGTTGAACTATT+TGG | 0.289716 | 3_3:+91110698 | Msa0483220:three_prime_UTR |
| GTTTGGGTACACTTGGTAAT+TGG | 0.302683 | 3_3:+91110727 | Msa0483220:three_prime_UTR |
| ACTTGCGGCATACTGGAAAT+TGG | 0.315128 | 3_3:+91109301 | Msa0483220:CDS |
| TACTTGAGACCTGTGCCTTT+GGG | 0.324327 | 3_3:+91110631 | Msa0483220:three_prime_UTR |
| CTACGGCTCCTGCTCCTACT+TGG | 0.345238 | 3_3:-91110342 | None:intergenic |
| AGCAATGGCCGGGGTGGACG+CGG | 0.347817 | 3_3:+91107295 | Msa0483220:CDS |
| GTACTTGAGACCTGTGCCTT+TGG | 0.351821 | 3_3:+91110630 | Msa0483220:three_prime_UTR |
| TGGCTGAGAAATACTTATTT+GGG | 0.353579 | 3_3:+91110571 | Msa0483220:three_prime_UTR |
| TTAAGTTATGAGGAATTTGA+TGG | 0.366073 | 3_3:+91110658 | Msa0483220:three_prime_UTR |
| AGCTTGATGACTCCGAGTTC+CGG | 0.370233 | 3_3:+91108048 | Msa0483220:CDS |
| GAACGAGAAACTGATCTTGC+AGG | 0.371081 | 3_3:-91108467 | None:intergenic |
| ATACTGGAAATTGGAAATTA+GGG | 0.377867 | 3_3:+91109310 | Msa0483220:CDS |
| GGGGTGGACGCGGGGTATCC+AGG | 0.383584 | 3_3:+91107305 | Msa0483220:CDS |
| TGCATCCTGGCAGGATCTTA+AGG | 0.383895 | 3_3:+91107455 | Msa0483220:CDS |
| TATTTGAACTTTAAACTCTC+TGG | 0.388662 | 3_3:+91110601 | Msa0483220:three_prime_UTR |
| CCGCAGCCGTAGCGACAGTC+CGG | 0.397841 | 3_3:+91108287 | Msa0483220:CDS |
| ATTGGAAACTTGCGGCATAC+TGG | 0.412308 | 3_3:+91109294 | Msa0483220:CDS |
| CAGGATCACATGCGAAAAGC+TGG | 0.413996 | 3_3:+91107560 | Msa0483220:intron |
| AGATATAACCAACCCGTAAT+CGG | 0.416963 | 3_3:-91107106 | Msa0483210:intron |
| TTTGGGCATCTTAAGTTATG+AGG | 0.426554 | 3_3:+91110648 | Msa0483220:three_prime_UTR |
| TTTCTAGTAATATTTGACTT+TGG | 0.432664 | 3_3:+91110551 | Msa0483220:three_prime_UTR |
| GCAATGGCCGGGGTGGACGC+GGG | 0.434998 | 3_3:+91107296 | Msa0483220:CDS |
| GCCCTCTTCTGCATCCTGGC+AGG | 0.444232 | 3_3:+91107446 | Msa0483220:CDS |
| TCCACAACAAATTGAGTTGT+AGG | 0.456640 | 3_3:-91109357 | None:intergenic |
| GAGGCTGCACATGGCGGTCG+TGG | 0.456810 | 3_3:+91107238 | Msa0483220:CDS |
| GACTCTAGAAGTCCTGGTCG+TGG | 0.466709 | 3_3:+91108216 | Msa0483220:CDS |
| GACTGCCCTCTTCTGCATCC+TGG | 0.467631 | 3_3:+91107442 | Msa0483220:CDS |
| GTCAAACAGCAAATCTCCTA+AGG | 0.468070 | 3_3:+91108412 | Msa0483220:intron |
| GATTGATTTGCAGGTACTAC+CGG | 0.470285 | 3_3:+91107839 | Msa0483220:intron |
| ACAGCAGTCACAGCAATGGC+CGG | 0.479635 | 3_3:+91107284 | Msa0483220:CDS |
| GAAATTGGAAATTAGGGACT+TGG | 0.485733 | 3_3:+91109316 | Msa0483220:CDS |
| CAGCAGTCACAGCAATGGCC+GGG | 0.486619 | 3_3:+91107285 | Msa0483220:CDS |
| GTTCCTTGTTTGGGTACACT+TGG | 0.488307 | 3_3:+91110720 | Msa0483220:three_prime_UTR |
| ATTGGAAATTAGGGACTTGG+TGG | 0.490526 | 3_3:+91109319 | Msa0483220:CDS |
| CCGGACTGTCGCTACGGCTG+CGG | 0.506949 | 3_3:-91108287 | None:intergenic |
| GATCTTGCAGGAGATTTAGC+TGG | 0.507600 | 3_3:-91108455 | None:intergenic |
| CAATGGCCGGGGTGGACGCG+GGG | 0.514949 | 3_3:+91107297 | Msa0483220:CDS |
| ACCACGATATTCAGAGCGCC+TGG | 0.518470 | 3_3:-91107323 | None:intergenic |
| TGCAGGTACTACCGGGATTG+TGG | 0.518632 | 3_3:+91107847 | Msa0483220:intron |
| GCCTACAACTCAATTTGTTG+TGG | 0.522039 | 3_3:+91109356 | Msa0483220:CDS |
| TTGGAAATTAGGGACTTGGT+GGG | 0.523036 | 3_3:+91109320 | Msa0483220:CDS |
| GCAGGAGTCCAAGTAGGAGC+AGG | 0.530125 | 3_3:+91110334 | Msa0483220:CDS |
| AGGCGGGACTCTAGAAGTCC+TGG | 0.532405 | 3_3:+91108210 | Msa0483220:CDS |
| TCTCACCTTAAGATCCTGCC+AGG | 0.539635 | 3_3:-91107460 | None:intergenic |
| AGGATCACATGCGAAAAGCT+GGG | 0.542509 | 3_3:+91107561 | Msa0483220:intron |
| GCCGTAGCAAGAGTTTGTCC+AGG | 0.544644 | 3_3:+91110358 | Msa0483220:CDS |
| TCTACTACCATATAAAATCA+AGG | 0.545873 | 3_3:-91110682 | None:intergenic |
| TGCGGCTGCGACTACGACTG+CGG | 0.546200 | 3_3:-91108269 | None:intergenic |
| TTTCTTAGATTGGAAACTTG+CGG | 0.547983 | 3_3:+91109286 | Msa0483220:intron |
| CTTAAGATGCCCAAAGGCAC+AGG | 0.549576 | 3_3:-91110640 | None:intergenic |
| ACTCTAGAAGTCCTGGTCGT+GGG | 0.552106 | 3_3:+91108217 | Msa0483220:CDS |
| AGCAGTCACAGCAATGGCCG+GGG | 0.555032 | 3_3:+91107286 | Msa0483220:CDS |
| TGGATACCCCGCGTCCACCC+CGG | 0.555086 | 3_3:-91107303 | None:intergenic |
| ATTGATTTGCAGGTACTACC+GGG | 0.557644 | 3_3:+91107840 | Msa0483220:intron |
| GAATGAGAAGGCCCACGACC+AGG | 0.558643 | 3_3:-91108228 | None:intergenic |
| GTGCTAGCAGGAGTCCAAGT+AGG | 0.558874 | 3_3:+91110328 | Msa0483220:CDS |
| ACCTGGACAAACTCTTGCTA+CGG | 0.558954 | 3_3:-91110359 | None:intergenic |
| TCCTGCCAGGATGCAGAAGA+GGG | 0.565631 | 3_3:-91107447 | None:intergenic |
| GATGCAATTCGCGGTCGTGA+TGG | 0.566019 | 3_3:+91107065 | Msa0483220:CDS |
| TACAACTCAATTTGTTGTGG+AGG | 0.566703 | 3_3:+91109359 | Msa0483220:CDS |
| AAATACCTTCTGCTATGGCC+CGG | 0.567658 | 3_3:-91108306 | None:intergenic |
| GATTGTTACTAATGAAGAAG+TGG | 0.569587 | 3_3:+91110500 | Msa0483220:three_prime_UTR |
| GTTGGAAATACCTTCTGCTA+TGG | 0.570823 | 3_3:-91108311 | None:intergenic |
| CGCAGCCGTAGCGACAGTCC+GGG | 0.576383 | 3_3:+91108288 | Msa0483220:CDS |
| ACGACCGCGAATTGCATCCT+CGG | 0.584181 | 3_3:-91107060 | Msa0483210:intron |
| ATCCTGCCAGGATGCAGAAG+AGG | 0.589165 | 3_3:-91107448 | None:intergenic |
| ACAGTCCGGGCCATAGCAGA+AGG | 0.593328 | 3_3:+91108301 | Msa0483220:CDS |
| TCATACACGAACGTAAGACT+TGG | 0.593435 | 3_3:-91108081 | None:intergenic |
| TTTAGCTGGTGAACGTTGTG+TGG | 0.599751 | 3_3:-91108441 | None:intergenic |
| CGTGGGCCTTCTCATTCTAG+AGG | 0.605800 | 3_3:+91108234 | Msa0483220:CDS |
| TATGGCCCGGACTGTCGCTA+CGG | 0.607162 | 3_3:-91108293 | None:intergenic |
| AGGTGAGGGAATATGATTCG+AGG | 0.609002 | 3_3:+91108190 | Msa0483220:intron |
| GATGCCGAGGATGCAATTCG+CGG | 0.609063 | 3_3:+91107056 | Msa0483220:CDS |
| TCAAACAGCAAATCTCCTAA+GGG | 0.610559 | 3_3:+91108413 | Msa0483220:intron |
| TTACCAAGTGTACCCAAACA+AGG | 0.611840 | 3_3:-91110723 | None:intergenic |
| GAGGGAATATGATTCGAGGC+GGG | 0.617120 | 3_3:+91108194 | Msa0483220:CDS |
| TTATAGGTGGAGGCTGCACA+TGG | 0.617981 | 3_3:+91107229 | Msa0483220:intron |
| CTTCTTCCTCTAGAATGAGA+AGG | 0.622211 | 3_3:-91108240 | None:intergenic |
| CGATACAGCAGTCACAGCAA+TGG | 0.624303 | 3_3:+91107280 | Msa0483220:CDS |
| GTTTGTGTAATCCACAATCC+CGG | 0.625161 | 3_3:-91107858 | None:intergenic |
| ACTAATGAAGAAGTGGATGA+TGG | 0.627701 | 3_3:+91110507 | Msa0483220:three_prime_UTR |
| GGATCACATGCGAAAAGCTG+GGG | 0.630537 | 3_3:+91107562 | Msa0483220:intron |
| TCCAGGCGCTCTGAATATCG+TGG | 0.656235 | 3_3:+91107322 | Msa0483220:CDS |
| AGTCACAGCAATGGCCGGGG+TGG | 0.660201 | 3_3:+91107289 | Msa0483220:CDS |
| TGAGGGAATATGATTCGAGG+CGG | 0.676478 | 3_3:+91108193 | Msa0483220:CDS |
| TCATAACTTAAGATGCCCAA+AGG | 0.677674 | 3_3:-91110646 | None:intergenic |
| TAGGTGGAGGCTGCACATGG+CGG | 0.727287 | 3_3:+91107232 | Msa0483220:intron |
| GAAGTGGATGATGGTCAGTG+TGG | 0.762376 | 3_3:+91110516 | Msa0483220:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTATTATGTTTTATTTG+AGG | + | chr3_3:91107363-91107382 | Msa0483220:intron | 10.0% |
| !! | GAAAGAAAAAAATTAAAATA+TGG | - | chr3_3:91108376-91108395 | None:intergenic | 10.0% |
| !!! | AAGCATTTTAATTATTTATT+TGG | + | chr3_3:91108615-91108634 | Msa0483220:intron | 10.0% |
| !! | AAGAAAAAAAATATTAAAAG+AGG | - | chr3_3:91109114-91109133 | None:intergenic | 10.0% |
| !!! | CAAAACATTTTTTATTTATA+AGG | - | chr3_3:91110770-91110789 | None:intergenic | 10.0% |
| !! | TTAAACAGTATTAAGAATTA+AGG | - | chr3_3:91107199-91107218 | None:intergenic | 15.0% |
| !! | GTTTAAATTTGTATGTTTAT+AGG | + | chr3_3:91107213-91107232 | Msa0483220:intron | 15.0% |
| !! | ACTAATACATAAAATCTAAA+GGG | - | chr3_3:91107663-91107682 | None:intergenic | 15.0% |
| !! | TACTAATACATAAAATCTAA+AGG | - | chr3_3:91107664-91107683 | None:intergenic | 15.0% |
| !! | AATAAATAAAACCATATAAG+TGG | - | chr3_3:91107918-91107937 | None:intergenic | 15.0% |
| !!! | TATGGTTTTATTTATTTTGA+AGG | + | chr3_3:91107922-91107941 | Msa0483220:intron | 15.0% |
| !!! | TTACACTTTTAATAAAAGAA+GGG | - | chr3_3:91109042-91109061 | None:intergenic | 15.0% |
| !! | GAAAGAAAAAAAAATGATAT+GGG | - | chr3_3:91109169-91109188 | None:intergenic | 15.0% |
| !! | TGAAAGAAAAAAAAATGATA+TGG | - | chr3_3:91109170-91109189 | None:intergenic | 15.0% |
| !! | ATAAATAAAATCATTAGTTG+AGG | - | chr3_3:91110280-91110299 | None:intergenic | 15.0% |
| !! | AGTTATAAGATTATTAAAGC+AGG | - | chr3_3:91107140-91107159 | None:intergenic | 20.0% |
| !! | TAAATTTGTATGTTTATAGG+TGG | + | chr3_3:91107216-91107235 | Msa0483220:intron | 20.0% |
| !! | GAATAACTTATCTAACAAAA+TGG | - | chr3_3:91107499-91107518 | None:intergenic | 20.0% |
| !!! | ATTTATTTTGAAGGATATCA+TGG | + | chr3_3:91107931-91107950 | Msa0483220:intron | 20.0% |
| !! | ACAATCTAGATAATTATAAG+AGG | - | chr3_3:91107987-91108006 | None:intergenic | 20.0% |
| !!! | AAGTTTTAACAATCAAATTC+AGG | - | chr3_3:91108107-91108126 | None:intergenic | 20.0% |
| !! | AAATATGGAATCTTTATAGA+AGG | - | chr3_3:91108361-91108380 | None:intergenic | 20.0% |
| !!! | TTGATAATGAACAGAATAAA+AGG | + | chr3_3:91108732-91108751 | Msa0483220:intron | 20.0% |
| !! | TTTAAGAAAACAAGTTTACT+AGG | - | chr3_3:91109017-91109036 | None:intergenic | 20.0% |
| !!! | GTTACACTTTTAATAAAAGA+AGG | - | chr3_3:91109043-91109062 | None:intergenic | 20.0% |
| !! | AAAAAAAAATGATATGGGAA+GGG | - | chr3_3:91109164-91109183 | None:intergenic | 20.0% |
| !!! | GATTTATACTATGTTATTTG+TGG | + | chr3_3:91109989-91110008 | Msa0483220:intron | 20.0% |
| !!! | GTGTCTTTATTAATTTTGTT+TGG | + | chr3_3:91110424-91110443 | Msa0483220:intron | 20.0% |
| !!! | TTTCTAGTAATATTTGACTT+TGG | + | chr3_3:91110551-91110570 | Msa0483220:three_prime_UTR | 20.0% |
| !!! | GTTTTATTTGAGGATGTTTT+TGG | + | chr3_3:91107373-91107392 | Msa0483220:intron | 25.0% |
| ! | TAATATAATAGATGCCAGAA+GGG | - | chr3_3:91107732-91107751 | None:intergenic | 25.0% |
| ! | TATTAGTTCCGTCTATATTA+TGG | + | chr3_3:91107747-91107766 | Msa0483220:intron | 25.0% |
| !!! | ATATATTGTGATTGATTTGC+AGG | + | chr3_3:91107830-91107849 | Msa0483220:intron | 25.0% |
| ! | ATGAACAGAATAAAAGGAAT+TGG | + | chr3_3:91108738-91108757 | Msa0483220:intron | 25.0% |
| !! | AATTCATGCATATCTTTTCT+TGG | + | chr3_3:91108787-91108806 | Msa0483220:intron | 25.0% |
| ! | GAAAAAAAAATGATATGGGA+AGG | - | chr3_3:91109165-91109184 | None:intergenic | 25.0% |
| !! | GGAATTTTCACAAAAACAAA+AGG | - | chr3_3:91109259-91109278 | None:intergenic | 25.0% |
| !!! | TCCTTTGTTTTTTCTTAGAT+TGG | + | chr3_3:91109276-91109295 | Msa0483220:intron | 25.0% |
| ! | TCCAATCTAAGAAAAAACAA+AGG | - | chr3_3:91109280-91109299 | None:intergenic | 25.0% |
| ! | ATACTGGAAATTGGAAATTA+GGG | + | chr3_3:91109310-91109329 | Msa0483220:CDS | 25.0% |
| ! | TTAGAACAAATGTACTATGA+GGG | - | chr3_3:91109417-91109436 | None:intergenic | 25.0% |
| ! | ATTAGAACAAATGTACTATG+AGG | - | chr3_3:91109418-91109437 | None:intergenic | 25.0% |
| ! | TCTTGTGTTAAAAGGAAATT+AGG | + | chr3_3:91109515-91109534 | Msa0483220:intron | 25.0% |
| ! | GTTAAAAGGAAATTAGGATT+TGG | + | chr3_3:91109521-91109540 | Msa0483220:intron | 25.0% |
| ! | GGATAATTTCATTACAATTG+CGG | + | chr3_3:91109567-91109586 | Msa0483220:intron | 25.0% |
| ! | GATAATTTCATTACAATTGC+GGG | + | chr3_3:91109568-91109587 | Msa0483220:intron | 25.0% |
| ! | ATGATAAATAAACAATCCCA+AGG | - | chr3_3:91109697-91109716 | None:intergenic | 25.0% |
| !!! | ATTTGTTTTTTTACCTCTCT+TGG | + | chr3_3:91109807-91109826 | Msa0483220:intron | 25.0% |
| !!! | TTTGTTTTTTTACCTCTCTT+GGG | + | chr3_3:91109808-91109827 | Msa0483220:intron | 25.0% |
| !!! | ATTTGTTTTTTTACCTCTCT+TGG | + | chr3_3:91109807-91109826 | Msa0483220:intron | 25.0% |
| !!! | TTTGTTTTTTTACCTCTCTT+GGG | + | chr3_3:91109808-91109827 | Msa0483220:intron | 25.0% |
| ! | TGTTGGATCAAATTTGATAA+GGG | + | chr3_3:91109958-91109977 | Msa0483220:intron | 25.0% |
| ! | GAAGCAAATTAAATGTTCAA+TGG | - | chr3_3:91110082-91110101 | None:intergenic | 25.0% |
| ! | AAAACTATACGTAACTTTCT+TGG | - | chr3_3:91110238-91110257 | None:intergenic | 25.0% |
| !! | AAGAAAGTTACGTATAGTTT+TGG | + | chr3_3:91110237-91110256 | Msa0483220:intron | 25.0% |
| !!! | TACGTATAGTTTTGGTATTT+TGG | + | chr3_3:91110245-91110264 | Msa0483220:intron | 25.0% |
| !!! | ACGTATAGTTTTGGTATTTT+GGG | + | chr3_3:91110246-91110265 | Msa0483220:intron | 25.0% |
| ! | CATGGCAATTTCATTAAAAA+AGG | - | chr3_3:91110398-91110417 | None:intergenic | 25.0% |
| ! | TATTTGAACTTTAAACTCTC+TGG | + | chr3_3:91110601-91110620 | Msa0483220:three_prime_UTR | 25.0% |
| ! | TTAAGTTATGAGGAATTTGA+TGG | + | chr3_3:91110658-91110677 | Msa0483220:three_prime_UTR | 25.0% |
| ! | TCTACTACCATATAAAATCA+AGG | - | chr3_3:91110685-91110704 | None:intergenic | 25.0% |
| ! | TAGTAGATTGTTGAACTATT+TGG | + | chr3_3:91110698-91110717 | Msa0483220:three_prime_UTR | 25.0% |
| !! | GTGATGGTTATGATTTTGAT+GGG | + | chr3_3:91107081-91107100 | Msa0483220:CDS | 30.0% |
| AATTGCTTATACCAGAAGAA+TGG | + | chr3_3:91107162-91107181 | Msa0483220:intron | 30.0% | |
| ATTTGTATGTTTATAGGTGG+AGG | + | chr3_3:91107219-91107238 | Msa0483220:intron | 30.0% | |
| !!! | GGTATGCTTTTGAAATCATT+TGG | + | chr3_3:91107394-91107413 | Msa0483220:intron | 30.0% |
| AATAGTGGTTTCTTAAATGC+AGG | + | chr3_3:91107541-91107560 | Msa0483220:intron | 30.0% | |
| ! | TTTTCCCAAGTTTTTCATGA+TGG | + | chr3_3:91107593-91107612 | Msa0483220:CDS | 30.0% |
| AATATAATAGATGCCAGAAG+GGG | - | chr3_3:91107731-91107750 | None:intergenic | 30.0% | |
| CTAATATAATAGATGCCAGA+AGG | - | chr3_3:91107733-91107752 | None:intergenic | 30.0% | |
| ! | TAAGAGTCTAAGATACATGT+TGG | - | chr3_3:91108332-91108351 | None:intergenic | 30.0% |
| TGGGGTACATTCTTTAATTA+TGG | + | chr3_3:91108706-91108725 | Msa0483220:intron | 30.0% | |
| GGGGTACATTCTTTAATTAT+GGG | + | chr3_3:91108707-91108726 | Msa0483220:intron | 30.0% | |
| TTGTCTTTGTCCTATTTAAC+AGG | + | chr3_3:91108864-91108883 | Msa0483220:intron | 30.0% | |
| TGTCCTATTTAACAGGTTAA+AGG | + | chr3_3:91108871-91108890 | Msa0483220:intron | 30.0% | |
| ACTCCTTTAACCTGTTAAAT+AGG | - | chr3_3:91108877-91108896 | None:intergenic | 30.0% | |
| !!! | AAAGTTATTTTTGCCATCTG+TGG | + | chr3_3:91108973-91108992 | Msa0483220:intron | 30.0% |
| TGAAAGAAAACATTCCAACA+TGG | - | chr3_3:91109232-91109251 | None:intergenic | 30.0% | |
| TTTCTTAGATTGGAAACTTG+CGG | + | chr3_3:91109286-91109305 | Msa0483220:intron | 30.0% | |
| CATACTGGAAATTGGAAATT+AGG | + | chr3_3:91109309-91109328 | Msa0483220:CDS | 30.0% | |
| !! | AGGTATGGTATTTTTCAGAT+GGG | + | chr3_3:91109379-91109398 | Msa0483220:intron | 30.0% |
| GTGTCTTAATGTTTAACCTT+GGG | + | chr3_3:91109678-91109697 | Msa0483220:intron | 30.0% | |
| CTGTTGGATCAAATTTGATA+AGG | + | chr3_3:91109957-91109976 | Msa0483220:intron | 30.0% | |
| AAATTTGATAAGGGAACTTG+TGG | + | chr3_3:91109967-91109986 | Msa0483220:intron | 30.0% | |
| TAATAAAGACACGAAATGCA+TGG | - | chr3_3:91110416-91110435 | None:intergenic | 30.0% | |
| !!! | ATGCTTAACCCTATTTTGAT+CGG | + | chr3_3:91110453-91110472 | Msa0483220:intron | 30.0% |
| GATTGTTACTAATGAAGAAG+TGG | + | chr3_3:91110500-91110519 | Msa0483220:three_prime_UTR | 30.0% | |
| TTGGCTGAGAAATACTTATT+TGG | + | chr3_3:91110570-91110589 | Msa0483220:three_prime_UTR | 30.0% | |
| TGGCTGAGAAATACTTATTT+GGG | + | chr3_3:91110571-91110590 | Msa0483220:three_prime_UTR | 30.0% | |
| !! | TGATGGACCTTGATTTTATA+TGG | + | chr3_3:91110675-91110694 | Msa0483220:three_prime_UTR | 30.0% |
| ! | AACTATTTGGTTCCTTGTTT+GGG | + | chr3_3:91110711-91110730 | Msa0483220:three_prime_UTR | 30.0% |
| ! | CGTGATGGTTATGATTTTGA+TGG | + | chr3_3:91107080-91107099 | Msa0483220:CDS | 35.0% |
| AGATATAACCAACCCGTAAT+CGG | - | chr3_3:91107109-91107128 | Msa0483210:intron | 35.0% | |
| ATTGACTAGAACTGCAAAAG+AGG | - | chr3_3:91107421-91107440 | None:intergenic | 35.0% | |
| !! | TCTTTTGCAGTTCTAGTCAA+TGG | + | chr3_3:91107420-91107439 | Msa0483220:intron | 35.0% |
| !! | CATCAATACTGACTCAATAG+TGG | + | chr3_3:91107526-91107545 | Msa0483220:intron | 35.0% |
| CCTTCCATCATGAAAAACTT+GGG | - | chr3_3:91107600-91107619 | None:intergenic | 35.0% | |
| !! | CCAAGTTTTTCATGATGGAA+GGG | + | chr3_3:91107598-91107617 | Msa0483220:CDS | 35.0% |
| !! | CAAGTTTTTCATGATGGAAG+GGG | + | chr3_3:91107599-91107618 | Msa0483220:CDS | 35.0% |
| ATATAATAGATGCCAGAAGG+GGG | - | chr3_3:91107730-91107749 | None:intergenic | 35.0% | |
| TAGTTCCGTCTATATTATGG+TGG | + | chr3_3:91107750-91107769 | Msa0483220:intron | 35.0% | |
| AGATGCCACCATAATATAGA+CGG | - | chr3_3:91107758-91107777 | None:intergenic | 35.0% | |
| AAATATCTCACTTCTCTGAC+AGG | - | chr3_3:91107784-91107803 | None:intergenic | 35.0% | |
| AAACCATATAAGTGGAGAAG+AGG | - | chr3_3:91107910-91107929 | None:intergenic | 35.0% | |
| !! | AAGACTTGGAAAAAGCATTC+CGG | - | chr3_3:91108070-91108089 | None:intergenic | 35.0% |
| TCAAACAGCAAATCTCCTAA+GGG | + | chr3_3:91108413-91108432 | Msa0483220:intron | 35.0% | |
| TATCATACCCTGATAAAGAG+CGG | - | chr3_3:91108511-91108530 | None:intergenic | 35.0% | |
| ! | GTCTGTTACTATGTTTCTGA+TGG | + | chr3_3:91108555-91108574 | Msa0483220:intron | 35.0% |
| !! | TCTATTGTTTTGTCCTAGTG+AGG | + | chr3_3:91108837-91108856 | Msa0483220:intron | 35.0% |
| TTAACAGGTTAAAGGAGTTG+AGG | + | chr3_3:91108879-91108898 | Msa0483220:intron | 35.0% | |
| !!! | GCATTTTTTTTCCTTCGTCA+GGG | - | chr3_3:91108911-91108930 | None:intergenic | 35.0% |
| !!! | AGCATTTTTTTTCCTTCGTC+AGG | - | chr3_3:91108912-91108931 | None:intergenic | 35.0% |
| TATCAACATGAAACCACAGA+TGG | - | chr3_3:91108989-91109008 | None:intergenic | 35.0% | |
| AAGAAAACATTCCAACATGG+AGG | - | chr3_3:91109229-91109248 | None:intergenic | 35.0% | |
| GAAATTGGAAATTAGGGACT+TGG | + | chr3_3:91109316-91109335 | Msa0483220:CDS | 35.0% | |
| ! | TCCACAACAAATTGAGTTGT+AGG | - | chr3_3:91109360-91109379 | None:intergenic | 35.0% |
| !! | TACAACTCAATTTGTTGTGG+AGG | + | chr3_3:91109359-91109378 | Msa0483220:CDS | 35.0% |
| !! | GAGGTATGGTATTTTTCAGA+TGG | + | chr3_3:91109378-91109397 | Msa0483220:intron | 35.0% |
| ! | TTTTAGCATGTAAATGTCCG+TGG | + | chr3_3:91109440-91109459 | Msa0483220:intron | 35.0% |
| TTTAGCATGTAAATGTCCGT+GGG | + | chr3_3:91109441-91109460 | Msa0483220:intron | 35.0% | |
| ATTGGGAAACAAAGAGATCA+TGG | + | chr3_3:91109470-91109489 | Msa0483220:intron | 35.0% | |
| ! | CAAGAAATCCAGCTCTAATA+TGG | - | chr3_3:91109500-91109519 | None:intergenic | 35.0% |
| GCTGGATTTCTTGTGTTAAA+AGG | + | chr3_3:91109507-91109526 | Msa0483220:intron | 35.0% | |
| AAATTATCCCTAGTGCTCAT+TGG | - | chr3_3:91109556-91109575 | None:intergenic | 35.0% | |
| TATCTGGATTCTCTGGATTA+TGG | + | chr3_3:91109622-91109641 | Msa0483220:intron | 35.0% | |
| GGTGTCTTAATGTTTAACCT+TGG | + | chr3_3:91109677-91109696 | Msa0483220:intron | 35.0% | |
| GCCAAAGAACGAAATGTTAT+GGG | - | chr3_3:91109753-91109772 | None:intergenic | 35.0% | |
| AGCCAAAGAACGAAATGTTA+TGG | - | chr3_3:91109754-91109773 | None:intergenic | 35.0% | |
| !!! | TTCTTTGGCTTTTTCTCTGT+TGG | + | chr3_3:91109764-91109783 | Msa0483220:intron | 35.0% |
| !!! | TCTTTGGCTTTTTCTCTGTT+GGG | + | chr3_3:91109765-91109784 | Msa0483220:intron | 35.0% |
| AATCAACACATGTTCTGATG+TGG | + | chr3_3:91110137-91110156 | Msa0483220:intron | 35.0% | |
| ! | ACTCTAGTTTCCTTACAGAT+GGG | - | chr3_3:91110163-91110182 | None:intergenic | 35.0% |
| ! | AACTCTAGTTTCCTTACAGA+TGG | - | chr3_3:91110164-91110183 | None:intergenic | 35.0% |
| ! | TTCTTTGTGCAAGAAGTACA+TGG | + | chr3_3:91110183-91110202 | Msa0483220:intron | 35.0% |
| ! | TCTTTGTGCAAGAAGTACAT+GGG | + | chr3_3:91110184-91110203 | Msa0483220:intron | 35.0% |
| !!! | TGCTTAACCCTATTTTGATC+GGG | + | chr3_3:91110454-91110473 | Msa0483220:intron | 35.0% |
| ACTAATGAAGAAGTGGATGA+TGG | + | chr3_3:91110507-91110526 | Msa0483220:three_prime_UTR | 35.0% | |
| TCATAACTTAAGATGCCCAA+AGG | - | chr3_3:91110649-91110668 | None:intergenic | 35.0% | |
| TTTGGGCATCTTAAGTTATG+AGG | + | chr3_3:91110648-91110667 | Msa0483220:three_prime_UTR | 35.0% | |
| ! | GAACTATTTGGTTCCTTGTT+TGG | + | chr3_3:91110710-91110729 | Msa0483220:three_prime_UTR | 35.0% |
| !!! | ATTTTGATGGGCACCGATTA+CGG | + | chr3_3:91107093-91107112 | Msa0483220:CDS | 40.0% |
| TTATCGTGTTGCCATTCTTC+TGG | - | chr3_3:91107176-91107195 | None:intergenic | 40.0% | |
| !! | CCCAAGTTTTTCATGATGGA+AGG | + | chr3_3:91107597-91107616 | Msa0483220:CDS | 40.0% |
| CCCTTCCATCATGAAAAACT+TGG | - | chr3_3:91107601-91107620 | None:intergenic | 40.0% | |
| !! | TTTTCATGATGGAAGGGGTA+CGG | + | chr3_3:91107604-91107623 | Msa0483220:intron | 40.0% |
| TGCTTATTTATTCCCCCTTC+TGG | + | chr3_3:91107715-91107734 | Msa0483220:intron | 40.0% | |
| !! | GATTGATTTGCAGGTACTAC+CGG | + | chr3_3:91107839-91107858 | Msa0483220:intron | 40.0% |
| !! | ATTGATTTGCAGGTACTACC+GGG | + | chr3_3:91107840-91107859 | Msa0483220:intron | 40.0% |
| GTTTGTGTAATCCACAATCC+CGG | - | chr3_3:91107861-91107880 | None:intergenic | 40.0% | |
| TCATACACGAACGTAAGACT+TGG | - | chr3_3:91108084-91108103 | None:intergenic | 40.0% | |
| TCATATTCCCTCACCTACAT+GGG | - | chr3_3:91108186-91108205 | None:intergenic | 40.0% | |
| ATCATATTCCCTCACCTACA+TGG | - | chr3_3:91108187-91108206 | None:intergenic | 40.0% | |
| !! | CTTCTTCCTCTAGAATGAGA+AGG | - | chr3_3:91108243-91108262 | None:intergenic | 40.0% |
| GTTGGAAATACCTTCTGCTA+TGG | - | chr3_3:91108314-91108333 | None:intergenic | 40.0% | |
| GTCAAACAGCAAATCTCCTA+AGG | + | chr3_3:91108412-91108431 | Msa0483220:intron | 40.0% | |
| ATCATACCCTGATAAAGAGC+GGG | - | chr3_3:91108510-91108529 | None:intergenic | 40.0% | |
| CCTATTAATGTGCCTCCTAT+GGG | - | chr3_3:91108681-91108700 | None:intergenic | 40.0% | |
| ACCTATTAATGTGCCTCCTA+TGG | - | chr3_3:91108682-91108701 | None:intergenic | 40.0% | |
| AGGCACATTAATAGGTTGCA+TGG | + | chr3_3:91108686-91108705 | Msa0483220:intron | 40.0% | |
| GGCACATTAATAGGTTGCAT+GGG | + | chr3_3:91108687-91108706 | Msa0483220:intron | 40.0% | |
| GCACATTAATAGGTTGCATG+GGG | + | chr3_3:91108688-91108707 | Msa0483220:intron | 40.0% | |
| CAAAGACAATTGACCTCACT+AGG | - | chr3_3:91108853-91108872 | None:intergenic | 40.0% | |
| TCATACATGCATTGTTCGTC+CGG | + | chr3_3:91109187-91109206 | Msa0483220:intron | 40.0% | |
| ATTGGAAATTAGGGACTTGG+TGG | + | chr3_3:91109319-91109338 | Msa0483220:CDS | 40.0% | |
| ! | TTGGAAATTAGGGACTTGGT+GGG | + | chr3_3:91109320-91109339 | Msa0483220:CDS | 40.0% |
| !! | GCCTACAACTCAATTTGTTG+TGG | + | chr3_3:91109356-91109375 | Msa0483220:CDS | 40.0% |
| !! | CTCAATTTGTTGTGGAGGTA+TGG | + | chr3_3:91109364-91109383 | Msa0483220:intron | 40.0% |
| !! | ATTTTTCAGATGGGCGACTT+TGG | + | chr3_3:91109388-91109407 | Msa0483220:intron | 40.0% |
| ! | ATGGATTGCCATATTAGAGC+TGG | + | chr3_3:91109489-91109508 | Msa0483220:intron | 40.0% |
| TCAAGATTTGCCAAGCCAAT+AGG | + | chr3_3:91109593-91109612 | Msa0483220:intron | 40.0% | |
| CAAGATTTGCCAAGCCAATA+GGG | + | chr3_3:91109594-91109613 | Msa0483220:intron | 40.0% | |
| ATTCTCTGGATTATGGTGCA+GGG | + | chr3_3:91109629-91109648 | Msa0483220:intron | 40.0% | |
| ! | ATTTCTTTTCTCCAGTCTGC+TGG | + | chr3_3:91109656-91109675 | Msa0483220:intron | 40.0% |
| GCCCATAACATTTCGTTCTT+TGG | + | chr3_3:91109749-91109768 | Msa0483220:intron | 40.0% | |
| ATCAAGGCTGTTGGATCAAT+TGG | + | chr3_3:91109857-91109876 | Msa0483220:intron | 40.0% | |
| TCAAGGCTGTTGGATCAATT+GGG | + | chr3_3:91109858-91109877 | Msa0483220:intron | 40.0% | |
| ! | TGTGGAACTTTTGCAGATCA+CGG | + | chr3_3:91110007-91110026 | Msa0483220:intron | 40.0% |
| AATTCACTCACCAGAGGTAA+TGG | - | chr3_3:91110048-91110067 | None:intergenic | 40.0% | |
| AGAGAAAATTCACTCACCAG+AGG | - | chr3_3:91110054-91110073 | None:intergenic | 40.0% | |
| TTGCTTCTTGTGCCTTGTAA+TGG | + | chr3_3:91110095-91110114 | Msa0483220:intron | 40.0% | |
| ACACTAATGCAGCCATTACA+AGG | - | chr3_3:91110110-91110129 | None:intergenic | 40.0% | |
| ACCAAGTCCCGATCAAAATA+GGG | - | chr3_3:91110464-91110483 | None:intergenic | 40.0% | |
| TTACCAAGTGTACCCAAACA+AGG | - | chr3_3:91110726-91110745 | None:intergenic | 40.0% | |
| ! | GTTTGGGTACACTTGGTAAT+TGG | + | chr3_3:91110727-91110746 | Msa0483220:three_prime_UTR | 40.0% |
| TGAAGATGTTCAAGATGCCG+AGG | + | chr3_3:91107043-91107062 | Msa0483220:CDS | 45.0% | |
| !!! | TTTTGATGGGCACCGATTAC+GGG | + | chr3_3:91107094-91107113 | Msa0483220:CDS | 45.0% |
| CTCTGAATATCGTGGTGTGT+AGG | + | chr3_3:91107330-91107349 | Msa0483220:intron | 45.0% | |
| AGGATCACATGCGAAAAGCT+GGG | + | chr3_3:91107561-91107580 | Msa0483220:intron | 45.0% | |
| ! | TTTCATGATGGAAGGGGTAC+GGG | + | chr3_3:91107605-91107624 | Msa0483220:intron | 45.0% |
| GAGCCTCTTCTCCACTTATA+TGG | + | chr3_3:91107904-91107923 | Msa0483220:intron | 45.0% | |
| !! | GGAAAAAGCATTCCGGAACT+CGG | - | chr3_3:91108063-91108082 | None:intergenic | 45.0% |
| AGGTGAGGGAATATGATTCG+AGG | + | chr3_3:91108190-91108209 | Msa0483220:intron | 45.0% | |
| TGAGGGAATATGATTCGAGG+CGG | + | chr3_3:91108193-91108212 | Msa0483220:CDS | 45.0% | |
| AAATACCTTCTGCTATGGCC+CGG | - | chr3_3:91108309-91108328 | None:intergenic | 45.0% | |
| !! | CGTTGTGTGGTTTTACCCTT+AGG | - | chr3_3:91108431-91108450 | None:intergenic | 45.0% |
| TTTAGCTGGTGAACGTTGTG+TGG | - | chr3_3:91108444-91108463 | None:intergenic | 45.0% | |
| GATCTTGCAGGAGATTTAGC+TGG | - | chr3_3:91108458-91108477 | None:intergenic | 45.0% | |
| GAACGAGAAACTGATCTTGC+AGG | - | chr3_3:91108470-91108489 | None:intergenic | 45.0% | |
| TAAAGAGCGGGATCTAGATC+TGG | - | chr3_3:91108498-91108517 | None:intergenic | 45.0% | |
| TCTAGATCCCGCTCTTTATC+AGG | + | chr3_3:91108500-91108519 | Msa0483220:intron | 45.0% | |
| CTAGATCCCGCTCTTTATCA+GGG | + | chr3_3:91108501-91108520 | Msa0483220:intron | 45.0% | |
| TTCTTAGCCTCTTACGTGCA+GGG | + | chr3_3:91108641-91108660 | Msa0483220:intron | 45.0% | |
| !! | AAAAAGTGTCCTCCCATAGG+AGG | + | chr3_3:91108666-91108685 | Msa0483220:intron | 45.0% |
| ATTAATGTGCCTCCTATGGG+AGG | - | chr3_3:91108678-91108697 | None:intergenic | 45.0% | |
| ! | CCCATAGGAGGCACATTAAT+AGG | + | chr3_3:91108678-91108697 | Msa0483220:intron | 45.0% |
| TGAGGTTAAAACCCTGACGA+AGG | + | chr3_3:91108897-91108916 | Msa0483220:intron | 45.0% | |
| ATTGGAAACTTGCGGCATAC+TGG | + | chr3_3:91109294-91109313 | Msa0483220:CDS | 45.0% | |
| ACTTGCGGCATACTGGAAAT+TGG | + | chr3_3:91109301-91109320 | Msa0483220:CDS | 45.0% | |
| !! | ATTAGGGACTTGGTGGGATT+TGG | + | chr3_3:91109326-91109345 | Msa0483220:CDS | 45.0% |
| AATCTCCACCAATGAGCACT+AGG | + | chr3_3:91109545-91109564 | Msa0483220:intron | 45.0% | |
| ATCTCCACCAATGAGCACTA+GGG | + | chr3_3:91109546-91109565 | Msa0483220:intron | 45.0% | |
| TTATCCCTAGTGCTCATTGG+TGG | - | chr3_3:91109553-91109572 | None:intergenic | 45.0% | |
| ATCCAGATAGTGCACCCTAT+TGG | - | chr3_3:91109611-91109630 | None:intergenic | 45.0% | |
| GATTCTCTGGATTATGGTGC+AGG | + | chr3_3:91109628-91109647 | Msa0483220:intron | 45.0% | |
| TTCTCTGGATTATGGTGCAG+GGG | + | chr3_3:91109630-91109649 | Msa0483220:intron | 45.0% | |
| ACATTAAGACACCAGCAGAC+TGG | - | chr3_3:91109670-91109689 | None:intergenic | 45.0% | |
| TTGATGCCTCTCCAATGTCA+CGG | - | chr3_3:91109842-91109861 | None:intergenic | 45.0% | |
| TTGATGCCTCTCCAATGTCA+CGG | - | chr3_3:91109842-91109861 | None:intergenic | 45.0% | |
| ! | ACTTTTGCAGATCACGGTCA+AGG | + | chr3_3:91110013-91110032 | Msa0483220:intron | 45.0% |
| ! | TTGTGCAAGAAGTACATGGG+AGG | + | chr3_3:91110187-91110206 | Msa0483220:intron | 45.0% |
| ACCTGGACAAACTCTTGCTA+CGG | - | chr3_3:91110362-91110381 | None:intergenic | 45.0% | |
| !!! | ACCCTATTTTGATCGGGACT+TGG | + | chr3_3:91110460-91110479 | Msa0483220:intron | 45.0% |
| GACCAAGTCCCGATCAAAAT+AGG | - | chr3_3:91110465-91110484 | None:intergenic | 45.0% | |
| !! | ATTTTGATCGGGACTTGGTC+TGG | + | chr3_3:91110465-91110484 | Msa0483220:intron | 45.0% |
| TACTTGAGACCTGTGCCTTT+GGG | + | chr3_3:91110631-91110650 | Msa0483220:three_prime_UTR | 45.0% | |
| ! | GTTCCTTGTTTGGGTACACT+TGG | + | chr3_3:91110720-91110739 | Msa0483220:three_prime_UTR | 45.0% |
| !!! | AAATAACTTTTTTTTTATAT+AGG | - | chr3_3:91108963-91108982 | None:intergenic | 5.0% |
| TTATAGGTGGAGGCTGCACA+TGG | + | chr3_3:91107229-91107248 | Msa0483220:intron | 50.0% | |
| CGATACAGCAGTCACAGCAA+TGG | + | chr3_3:91107280-91107299 | Msa0483220:CDS | 50.0% | |
| TGCATCCTGGCAGGATCTTA+AGG | + | chr3_3:91107455-91107474 | Msa0483220:CDS | 50.0% | |
| TCTCACCTTAAGATCCTGCC+AGG | - | chr3_3:91107463-91107482 | None:intergenic | 50.0% | |
| CAGGATCACATGCGAAAAGC+TGG | + | chr3_3:91107560-91107579 | Msa0483220:intron | 50.0% | |
| GGATCACATGCGAAAAGCTG+GGG | + | chr3_3:91107562-91107581 | Msa0483220:intron | 50.0% | |
| ! | AGCTTGATGACTCCGAGTTC+CGG | + | chr3_3:91108048-91108067 | Msa0483220:CDS | 50.0% |
| CACCTACATGGGCAAACAGA+GGG | - | chr3_3:91108175-91108194 | None:intergenic | 50.0% | |
| TCACCTACATGGGCAAACAG+AGG | - | chr3_3:91108176-91108195 | None:intergenic | 50.0% | |
| TCTGTTTGCCCATGTAGGTG+AGG | + | chr3_3:91108175-91108194 | Msa0483220:intron | 50.0% | |
| CTGTTTGCCCATGTAGGTGA+GGG | + | chr3_3:91108176-91108195 | Msa0483220:intron | 50.0% | |
| GAGGGAATATGATTCGAGGC+GGG | + | chr3_3:91108194-91108213 | Msa0483220:CDS | 50.0% | |
| ! | ACTCTAGAAGTCCTGGTCGT+GGG | + | chr3_3:91108217-91108236 | Msa0483220:CDS | 50.0% |
| CTTCTTAGCCTCTTACGTGC+AGG | + | chr3_3:91108640-91108659 | Msa0483220:intron | 50.0% | |
| TCTTAGCCTCTTACGTGCAG+GGG | + | chr3_3:91108642-91108661 | Msa0483220:intron | 50.0% | |
| ! | TTTTTCCCCCTGCACGTAAG+AGG | - | chr3_3:91108651-91108670 | None:intergenic | 50.0% |
| !! | GGGAAAAAGTGTCCTCCCAT+AGG | + | chr3_3:91108663-91108682 | Msa0483220:intron | 50.0% |
| AGGCATGTTTCTCCAGGTAC+CGG | - | chr3_3:91109209-91109228 | None:intergenic | 50.0% | |
| ! | ACATGGAGGCATGTTTCTCC+AGG | - | chr3_3:91109215-91109234 | None:intergenic | 50.0% |
| GGAGAAACATGCCTCCATGT+TGG | + | chr3_3:91109215-91109234 | Msa0483220:intron | 50.0% | |
| AATGTCCGTGGGTGCTAGAT+TGG | + | chr3_3:91109452-91109471 | Msa0483220:intron | 50.0% | |
| ATGTCCGTGGGTGCTAGATT+GGG | + | chr3_3:91109453-91109472 | Msa0483220:intron | 50.0% | |
| GTTTCCCAATCTAGCACCCA+CGG | - | chr3_3:91109460-91109479 | None:intergenic | 50.0% | |
| ! | GATAGTGCACCCTATTGGCT+TGG | - | chr3_3:91109606-91109625 | None:intergenic | 50.0% |
| AGCCAATAGGGTGCACTATC+TGG | + | chr3_3:91109606-91109625 | Msa0483220:intron | 50.0% | |
| GGTGCACTATCTGGATTCTC+TGG | + | chr3_3:91109615-91109634 | Msa0483220:intron | 50.0% | |
| !! | GTGACATTGGAGAGGCATCA+AGG | + | chr3_3:91109841-91109860 | Msa0483220:intron | 50.0% |
| !! | GTGACATTGGAGAGGCATCA+AGG | + | chr3_3:91109841-91109860 | Msa0483220:intron | 50.0% |
| GTCTAGGTCTCCATTACCTC+TGG | + | chr3_3:91110035-91110054 | Msa0483220:intron | 50.0% | |
| TCTGATGTGGCCCATCTGTA+AGG | + | chr3_3:91110150-91110169 | Msa0483220:intron | 50.0% | |
| !! | TGCTAGCACTGCGCTTTTTG+GGG | - | chr3_3:91110317-91110336 | None:intergenic | 50.0% |
| !! | CTGCTAGCACTGCGCTTTTT+GGG | - | chr3_3:91110318-91110337 | None:intergenic | 50.0% |
| AAGGACTCGAGATAGAGACC+TGG | - | chr3_3:91110379-91110398 | None:intergenic | 50.0% | |
| ! | GAAGTGGATGATGGTCAGTG+TGG | + | chr3_3:91110516-91110535 | Msa0483220:three_prime_UTR | 50.0% |
| GTACTTGAGACCTGTGCCTT+TGG | + | chr3_3:91110630-91110649 | Msa0483220:three_prime_UTR | 50.0% | |
| ! | CTTAAGATGCCCAAAGGCAC+AGG | - | chr3_3:91110643-91110662 | None:intergenic | 50.0% |
| GATGCCGAGGATGCAATTCG+CGG | + | chr3_3:91107056-91107075 | Msa0483220:CDS | 55.0% | |
| ACGACCGCGAATTGCATCCT+CGG | - | chr3_3:91107063-91107082 | Msa0483210:intron | 55.0% | |
| GATGCAATTCGCGGTCGTGA+TGG | + | chr3_3:91107065-91107084 | Msa0483220:CDS | 55.0% | |
| ACAGCAGTCACAGCAATGGC+CGG | + | chr3_3:91107284-91107303 | Msa0483220:CDS | 55.0% | |
| ! | TCCAGGCGCTCTGAATATCG+TGG | + | chr3_3:91107322-91107341 | Msa0483220:CDS | 55.0% |
| ! | ACCACGATATTCAGAGCGCC+TGG | - | chr3_3:91107326-91107345 | None:intergenic | 55.0% |
| TCCTGCCAGGATGCAGAAGA+GGG | - | chr3_3:91107450-91107469 | None:intergenic | 55.0% | |
| ATCCTGCCAGGATGCAGAAG+AGG | - | chr3_3:91107451-91107470 | None:intergenic | 55.0% | |
| ! | TGGAAGGGGTACGGGACATT+CGG | + | chr3_3:91107613-91107632 | Msa0483220:intron | 55.0% |
| TGCAGGTACTACCGGGATTG+TGG | + | chr3_3:91107847-91107866 | Msa0483220:intron | 55.0% | |
| CTCCCTCTGTTTGCCCATGT+AGG | + | chr3_3:91108170-91108189 | Msa0483220:intron | 55.0% | |
| ! | GACTCTAGAAGTCCTGGTCG+TGG | + | chr3_3:91108216-91108235 | Msa0483220:CDS | 55.0% |
| CGTGGGCCTTCTCATTCTAG+AGG | + | chr3_3:91108234-91108253 | Msa0483220:CDS | 55.0% | |
| CTTAGCCTCTTACGTGCAGG+GGG | + | chr3_3:91108643-91108662 | Msa0483220:intron | 55.0% | |
| TGCATTGTTCGTCCGGTACC+TGG | + | chr3_3:91109194-91109213 | Msa0483220:intron | 55.0% | |
| ACGGTTCGCAAACCCAAGAG+AGG | - | chr3_3:91109823-91109842 | None:intergenic | 55.0% | |
| GGGTTTGCGAACCGTGACAT+TGG | + | chr3_3:91109828-91109847 | Msa0483220:intron | 55.0% | |
| TGCGAACCGTGACATTGGAG+AGG | + | chr3_3:91109833-91109852 | Msa0483220:intron | 55.0% | |
| !! | TGGAGAGGCATCAAGGCTGT+TGG | + | chr3_3:91109848-91109867 | Msa0483220:intron | 55.0% |
| ACGGTTCGCAAACCCAAGAG+AGG | - | chr3_3:91109823-91109842 | None:intergenic | 55.0% | |
| GGGTTTGCGAACCGTGACAT+TGG | + | chr3_3:91109828-91109847 | Msa0483220:intron | 55.0% | |
| TGCGAACCGTGACATTGGAG+AGG | + | chr3_3:91109833-91109852 | Msa0483220:intron | 55.0% | |
| !! | TGGAGAGGCATCAAGGCTGT+TGG | + | chr3_3:91109848-91109867 | Msa0483220:intron | 55.0% |
| GCAGATCACGGTCAAGGTCT+AGG | + | chr3_3:91110019-91110038 | Msa0483220:intron | 55.0% | |
| ! | CCTGCTAGCACTGCGCTTTT+TGG | - | chr3_3:91110319-91110338 | None:intergenic | 55.0% |
| ! | CCAAAAAGCGCAGTGCTAGC+AGG | + | chr3_3:91110316-91110335 | Msa0483220:CDS | 55.0% |
| GTGCTAGCAGGAGTCCAAGT+AGG | + | chr3_3:91110328-91110347 | Msa0483220:CDS | 55.0% | |
| GCCGTAGCAAGAGTTTGTCC+AGG | + | chr3_3:91110358-91110377 | Msa0483220:CDS | 55.0% | |
| !! | GATGGGCACCGATTACGGGT+TGG | + | chr3_3:91107098-91107117 | Msa0483220:intron | 60.0% |
| TAGGTGGAGGCTGCACATGG+CGG | + | chr3_3:91107232-91107251 | Msa0483220:intron | 60.0% | |
| CAGCAGTCACAGCAATGGCC+GGG | + | chr3_3:91107285-91107304 | Msa0483220:CDS | 60.0% | |
| AGCAGTCACAGCAATGGCCG+GGG | + | chr3_3:91107286-91107305 | Msa0483220:CDS | 60.0% | |
| GACTGCCCTCTTCTGCATCC+TGG | + | chr3_3:91107442-91107461 | Msa0483220:CDS | 60.0% | |
| ! | AGGCGGGACTCTAGAAGTCC+TGG | + | chr3_3:91108210-91108229 | Msa0483220:CDS | 60.0% |
| GAATGAGAAGGCCCACGACC+AGG | - | chr3_3:91108231-91108250 | None:intergenic | 60.0% | |
| TATGGCCCGGACTGTCGCTA+CGG | - | chr3_3:91108296-91108315 | None:intergenic | 60.0% | |
| ACAGTCCGGGCCATAGCAGA+AGG | + | chr3_3:91108301-91108320 | Msa0483220:CDS | 60.0% | |
| GCAGGAGTCCAAGTAGGAGC+AGG | + | chr3_3:91110334-91110353 | Msa0483220:CDS | 60.0% | |
| CTACGGCTCCTGCTCCTACT+TGG | - | chr3_3:91110345-91110364 | None:intergenic | 60.0% | |
| ! | TGATCGGGACTTGGTCTGGC+AGG | + | chr3_3:91110469-91110488 | Msa0483220:intron | 60.0% |
| AGTCACAGCAATGGCCGGGG+TGG | + | chr3_3:91107289-91107308 | Msa0483220:CDS | 65.0% | |
| GCCCTCTTCTGCATCCTGGC+AGG | + | chr3_3:91107446-91107465 | Msa0483220:CDS | 65.0% | |
| TGCGGCTGCGACTACGACTG+CGG | - | chr3_3:91108272-91108291 | None:intergenic | 65.0% | |
| GAGGCTGCACATGGCGGTCG+TGG | + | chr3_3:91107238-91107257 | Msa0483220:CDS | 70.0% | |
| AGCAATGGCCGGGGTGGACG+CGG | + | chr3_3:91107295-91107314 | Msa0483220:CDS | 70.0% | |
| TGGATACCCCGCGTCCACCC+CGG | - | chr3_3:91107306-91107325 | None:intergenic | 70.0% | |
| CCGGACTGTCGCTACGGCTG+CGG | - | chr3_3:91108290-91108309 | None:intergenic | 70.0% | |
| CCGCAGCCGTAGCGACAGTC+CGG | + | chr3_3:91108287-91108306 | Msa0483220:CDS | 70.0% | |
| CGCAGCCGTAGCGACAGTCC+GGG | + | chr3_3:91108288-91108307 | Msa0483220:CDS | 70.0% | |
| GCAATGGCCGGGGTGGACGC+GGG | + | chr3_3:91107296-91107315 | Msa0483220:CDS | 75.0% | |
| CAATGGCCGGGGTGGACGCG+GGG | + | chr3_3:91107297-91107316 | Msa0483220:CDS | 75.0% | |
| ! | GGGGTGGACGCGGGGTATCC+AGG | + | chr3_3:91107305-91107324 | Msa0483220:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 91107041 | 91110803 | 91107041 | ID=Msa0483220;Name=Msa0483220 |
| chr3_3 | mRNA | 91107041 | 91110803 | 91107041 | ID=Msa0483220-mRNA-1;Parent=Msa0483220;Name=Msa0483220-mRNA-1;_AED=0.29;_eAED=0.29;_QI=0|0.81|0.83|1|0.54|0.66|12|309|252 |
| chr3_3 | exon | 91107041 | 91107115 | 91107041 | ID=Msa0483220-mRNA-1:exon:26619;Parent=Msa0483220-mRNA-1 |
| chr3_3 | exon | 91107235 | 91107343 | 91107235 | ID=Msa0483220-mRNA-1:exon:26620;Parent=Msa0483220-mRNA-1 |
| chr3_3 | exon | 91107430 | 91107476 | 91107430 | ID=Msa0483220-mRNA-1:exon:26621;Parent=Msa0483220-mRNA-1 |
| chr3_3 | exon | 91107563 | 91107620 | 91107563 | ID=Msa0483220-mRNA-1:exon:26622;Parent=Msa0483220-mRNA-1 |
| chr3_3 | exon | 91107852 | 91107901 | 91107852 | ID=Msa0483220-mRNA-1:exon:26623;Parent=Msa0483220-mRNA-1 |
| chr3_3 | exon | 91108041 | 91108097 | 91108041 | ID=Msa0483220-mRNA-1:exon:26624;Parent=Msa0483220-mRNA-1 |
| chr3_3 | exon | 91108192 | 91108322 | 91108192 | ID=Msa0483220-mRNA-1:exon:26625;Parent=Msa0483220-mRNA-1 |
| chr3_3 | exon | 91108421 | 91108478 | 91108421 | ID=Msa0483220-mRNA-1:exon:26626;Parent=Msa0483220-mRNA-1 |
| chr3_3 | exon | 91109294 | 91109380 | 91109294 | ID=Msa0483220-mRNA-1:exon:26627;Parent=Msa0483220-mRNA-1 |
| chr3_3 | exon | 91110023 | 91110028 | 91110023 | ID=Msa0483220-mRNA-1:exon:26628;Parent=Msa0483220-mRNA-1 |
| chr3_3 | exon | 91110303 | 91110379 | 91110303 | ID=Msa0483220-mRNA-1:exon:26629;Parent=Msa0483220-mRNA-1 |
| chr3_3 | exon | 91110491 | 91110803 | 91110491 | ID=Msa0483220-mRNA-1:exon:26630;Parent=Msa0483220-mRNA-1 |
| chr3_3 | CDS | 91107041 | 91107115 | 91107041 | ID=Msa0483220-mRNA-1:cds;Parent=Msa0483220-mRNA-1 |
| chr3_3 | CDS | 91107235 | 91107343 | 91107235 | ID=Msa0483220-mRNA-1:cds;Parent=Msa0483220-mRNA-1 |
| chr3_3 | CDS | 91107430 | 91107476 | 91107430 | ID=Msa0483220-mRNA-1:cds;Parent=Msa0483220-mRNA-1 |
| chr3_3 | CDS | 91107563 | 91107620 | 91107563 | ID=Msa0483220-mRNA-1:cds;Parent=Msa0483220-mRNA-1 |
| chr3_3 | CDS | 91107852 | 91107901 | 91107852 | ID=Msa0483220-mRNA-1:cds;Parent=Msa0483220-mRNA-1 |
| chr3_3 | CDS | 91108041 | 91108097 | 91108041 | ID=Msa0483220-mRNA-1:cds;Parent=Msa0483220-mRNA-1 |
| chr3_3 | CDS | 91108192 | 91108322 | 91108192 | ID=Msa0483220-mRNA-1:cds;Parent=Msa0483220-mRNA-1 |
| chr3_3 | CDS | 91108421 | 91108478 | 91108421 | ID=Msa0483220-mRNA-1:cds;Parent=Msa0483220-mRNA-1 |
| chr3_3 | CDS | 91109294 | 91109380 | 91109294 | ID=Msa0483220-mRNA-1:cds;Parent=Msa0483220-mRNA-1 |
| chr3_3 | CDS | 91110023 | 91110028 | 91110023 | ID=Msa0483220-mRNA-1:cds;Parent=Msa0483220-mRNA-1 |
| chr3_3 | CDS | 91110303 | 91110379 | 91110303 | ID=Msa0483220-mRNA-1:cds;Parent=Msa0483220-mRNA-1 |
| chr3_3 | CDS | 91110491 | 91110494 | 91110491 | ID=Msa0483220-mRNA-1:cds;Parent=Msa0483220-mRNA-1 |
| chr3_3 | three_prime_UTR | 91110495 | 91110803 | 91110495 | ID=Msa0483220-mRNA-1:three_prime_utr;Parent=Msa0483220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
