Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1126780 | AET02943.2 | 94.915 | 236 | 2 | 2 | 1 | 234 | 1 | 228 | 9.86e-154 | 444 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1126780 | sp|O22315|SR34_ARATH | 72.170 | 212 | 43 | 2 | 1 | 204 | 1 | 204 | 5.01e-97 | 292 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1126780 | G7LC00 | 94.915 | 236 | 2 | 2 | 1 | 234 | 1 | 228 | 4.71e-154 | 444 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1126780 | Msa1126800 | 0.851705 | 7.457760e-61 | -8.615850e-47 |
| Msa1126780 | Msa1264330 | 0.805811 | 1.114897e-49 | -8.615850e-47 |
| Msa1126780 | Msa1390120 | -0.801324 | 9.500961e-49 | -8.615850e-47 |
| Msa1126780 | Msa1395530 | -0.800538 | 1.375202e-48 | -8.615850e-47 |
| Msa0483220 | Msa1126780 | 0.821836 | 3.266840e-53 | -8.615850e-47 |
| Msa0581080 | Msa1126780 | 0.975370 | 7.902793e-140 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1126780 | MtrunA17_Chr7g0269331 | 94.915 | 236 | 2 | 2 | 1 | 234 | 1 | 228 | 1.29e-157 | 443 |
| Msa1126780 | MtrunA17_Chr1g0195251 | 78.481 | 237 | 43 | 1 | 1 | 237 | 1 | 229 | 7.19e-112 | 332 |
| Msa1126780 | MtrunA17_Chr1g0192221 | 64.639 | 263 | 73 | 3 | 1 | 251 | 32 | 286 | 1.28e-100 | 298 |
| Msa1126780 | MtrunA17_Chr7g0272311 | 74.020 | 204 | 43 | 2 | 1 | 204 | 1 | 194 | 2.82e-94 | 282 |
| Msa1126780 | MtrunA17_Chr3g0127781 | 65.385 | 208 | 52 | 2 | 1 | 196 | 1 | 200 | 8.76e-84 | 254 |
| Msa1126780 | MtrunA17_Chr8g0346471 | 34.682 | 173 | 89 | 6 | 7 | 177 | 2 | 152 | 1.28e-14 | 72.8 |
| Msa1126780 | MtrunA17_Chr7g0263341 | 46.429 | 84 | 39 | 2 | 9 | 91 | 13 | 91 | 1.02e-11 | 65.1 |
| Msa1126780 | MtrunA17_Chr1g0201001 | 32.479 | 117 | 69 | 3 | 7 | 120 | 29 | 138 | 2.51e-11 | 64.7 |
| Msa1126780 | MtrunA17_Chr1g0147821 | 48.649 | 74 | 30 | 3 | 9 | 81 | 4 | 70 | 7.54e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1126780 | AT1G02840.1 | 72.170 | 212 | 43 | 2 | 1 | 204 | 1 | 204 | 5.09e-98 | 292 |
| Msa1126780 | AT1G02840.4 | 72.170 | 212 | 43 | 2 | 1 | 204 | 1 | 204 | 1.03e-97 | 290 |
| Msa1126780 | AT1G02840.5 | 72.170 | 212 | 43 | 2 | 1 | 204 | 1 | 204 | 1.03e-97 | 290 |
| Msa1126780 | AT1G02840.3 | 72.170 | 212 | 43 | 2 | 1 | 204 | 1 | 204 | 1.03e-97 | 290 |
| Msa1126780 | AT1G02840.2 | 72.642 | 212 | 42 | 2 | 1 | 204 | 1 | 204 | 1.95e-97 | 290 |
| Msa1126780 | AT4G02430.3 | 70.244 | 205 | 41 | 2 | 1 | 196 | 1 | 194 | 1.48e-89 | 270 |
| Msa1126780 | AT1G09140.3 | 69.608 | 204 | 52 | 2 | 1 | 204 | 1 | 194 | 1.78e-89 | 269 |
| Msa1126780 | AT1G09140.2 | 69.608 | 204 | 52 | 2 | 1 | 204 | 1 | 194 | 2.42e-89 | 268 |
| Msa1126780 | AT1G09140.1 | 69.608 | 204 | 52 | 2 | 1 | 204 | 1 | 194 | 2.52e-89 | 269 |
| Msa1126780 | AT4G02430.4 | 70.244 | 205 | 41 | 2 | 1 | 196 | 1 | 194 | 3.45e-89 | 270 |
| Msa1126780 | AT3G49430.2 | 62.319 | 207 | 59 | 2 | 1 | 196 | 1 | 199 | 5.90e-81 | 249 |
| Msa1126780 | AT3G49430.5 | 62.319 | 207 | 59 | 2 | 1 | 196 | 1 | 199 | 8.98e-81 | 248 |
| Msa1126780 | AT3G49430.4 | 62.319 | 207 | 59 | 2 | 1 | 196 | 1 | 199 | 8.98e-81 | 248 |
| Msa1126780 | AT3G49430.7 | 62.319 | 207 | 59 | 2 | 1 | 196 | 1 | 199 | 8.98e-81 | 248 |
| Msa1126780 | AT3G49430.1 | 62.319 | 207 | 59 | 2 | 1 | 196 | 1 | 199 | 8.98e-81 | 248 |
| Msa1126780 | AT3G49430.3 | 62.319 | 207 | 59 | 2 | 1 | 196 | 1 | 199 | 8.98e-81 | 248 |
| Msa1126780 | AT3G49430.6 | 62.319 | 207 | 59 | 2 | 1 | 196 | 1 | 199 | 8.98e-81 | 248 |
| Msa1126780 | AT4G02430.1 | 72.414 | 174 | 39 | 1 | 1 | 165 | 1 | 174 | 2.58e-80 | 243 |
| Msa1126780 | AT4G02430.2 | 67.222 | 180 | 39 | 2 | 26 | 196 | 24 | 192 | 2.73e-72 | 226 |
| Msa1126780 | AT3G61860.1 | 32.900 | 231 | 126 | 8 | 7 | 235 | 2 | 205 | 3.35e-16 | 77.8 |
| Msa1126780 | AT3G53500.2 | 45.000 | 80 | 39 | 1 | 3 | 82 | 7 | 81 | 3.22e-12 | 66.6 |
| Msa1126780 | AT2G24590.1 | 50.685 | 73 | 30 | 2 | 9 | 81 | 4 | 70 | 2.42e-11 | 62.8 |
| Msa1126780 | AT4G31580.2 | 49.315 | 73 | 31 | 2 | 9 | 81 | 4 | 70 | 3.00e-11 | 62.4 |
| Msa1126780 | AT4G31580.1 | 49.315 | 73 | 31 | 2 | 9 | 81 | 4 | 70 | 3.00e-11 | 62.4 |
| Msa1126780 | AT5G52040.2 | 45.946 | 74 | 33 | 2 | 7 | 78 | 2 | 70 | 4.54e-11 | 63.9 |
| Msa1126780 | AT5G52040.1 | 45.946 | 74 | 33 | 2 | 7 | 78 | 2 | 70 | 4.95e-11 | 63.5 |
| Msa1126780 | AT2G37340.1 | 43.750 | 80 | 40 | 1 | 3 | 82 | 7 | 81 | 5.28e-11 | 63.2 |
Find 129 sgRNAs with CRISPR-Local
Find 389 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGCTGAGAAATACTTATT+TGG | 0.134144 | 7_3:+78328336 | Msa1126780:three_prime_UTR |
| CATACTGGAAATTGGAAATT+AGG | 0.197473 | 7_3:+78327075 | Msa1126780:CDS |
| CCTTTGATTTGAGGGGTAAA+TGG | 0.218382 | 7_3:-78323904 | None:intergenic |
| TCTAGATCCCGCTCTTTATC+AGG | 0.247387 | 7_3:+78326266 | Msa1126780:CDS |
| AACTATTTGGTTCCTTGTTT+GGG | 0.247699 | 7_3:+78328477 | Msa1126780:three_prime_UTR |
| GAACTATTTGGTTCCTTGTT+TGG | 0.251807 | 7_3:+78328476 | Msa1126780:three_prime_UTR |
| GAGCCTCTTCTCCACTTATA+TGG | 0.283554 | 7_3:+78325670 | Msa1126780:CDS |
| GTTTGGGCACACTTGGTAAT+TGG | 0.284837 | 7_3:+78328493 | Msa1126780:three_prime_UTR |
| ATTAGGGACTTGGTGGGATT+TGG | 0.289557 | 7_3:+78327092 | Msa1126780:CDS |
| TAGTAGATTGTTGAACTATT+TGG | 0.289716 | 7_3:+78328464 | Msa1126780:three_prime_UTR |
| ACTTGCGGCATACTGGAAAT+TGG | 0.315128 | 7_3:+78327067 | Msa1126780:CDS |
| GGGGCCTTGGCGGAACCTTT+AGG | 0.318746 | 7_3:-78324663 | None:intergenic |
| TACTTGAGACCTGTGCCTTT+GGG | 0.324327 | 7_3:+78328397 | Msa1126780:three_prime_UTR |
| CTACGGCTCCTGCTCCTACT+TGG | 0.345238 | 7_3:-78328108 | None:intergenic |
| AGCAATGGCCGGGGTGGACG+CGG | 0.347817 | 7_3:+78325061 | Msa1126780:CDS |
| CTTTGATTTGAGGGGTAAAT+GGG | 0.351524 | 7_3:-78323903 | None:intergenic |
| GTACTTGAGACCTGTGCCTT+TGG | 0.351821 | 7_3:+78328396 | Msa1126780:three_prime_UTR |
| TGGCTGAGAAATACTTATTT+GGG | 0.353579 | 7_3:+78328337 | Msa1126780:three_prime_UTR |
| TTAAGTTATGAGGAATTTGA+TGG | 0.366073 | 7_3:+78328424 | Msa1126780:three_prime_UTR |
| AGCTTGATGACTCCGAGTTC+CGG | 0.370233 | 7_3:+78325814 | Msa1126780:CDS |
| GAACGAGAAACTGATCTTGC+AGG | 0.371081 | 7_3:-78326233 | None:intergenic |
| ATACTGGAAATTGGAAATTA+GGG | 0.377867 | 7_3:+78327076 | Msa1126780:CDS |
| GGGGTGGACGCGGGGTATCC+AGG | 0.383584 | 7_3:+78325071 | Msa1126780:CDS |
| TGCATCCTGGCAGGATCTTA+AGG | 0.383895 | 7_3:+78325221 | Msa1126780:CDS |
| TATTTGAACTTTAAACTCTC+TGG | 0.388662 | 7_3:+78328367 | Msa1126780:three_prime_UTR |
| CCGCAGCCGTAGCGACAGTC+CGG | 0.397841 | 7_3:+78326053 | Msa1126780:CDS |
| AATCTTCAACTTCTCTTTCA+CGG | 0.399167 | 7_3:-78324197 | None:intergenic |
| ATTGGAAACTTGCGGCATAC+TGG | 0.412308 | 7_3:+78327060 | Msa1126780:CDS |
| CAGGATCACATGCGAAAAGC+TGG | 0.413996 | 7_3:+78325326 | Msa1126780:intron |
| AGATATAACCAACCCGTAAT+CGG | 0.416963 | 7_3:-78324872 | None:intergenic |
| AATTCACTCACCAGAGGTAA+TGG | 0.426222 | 7_3:-78327811 | None:intergenic |
| TTTGGGCATCTTAAGTTATG+AGG | 0.426554 | 7_3:+78328414 | Msa1126780:three_prime_UTR |
| GTTCCTTGTTTGGGCACACT+TGG | 0.432450 | 7_3:+78328486 | Msa1126780:three_prime_UTR |
| TTTCTAGTAATATTTGACTT+TGG | 0.432664 | 7_3:+78328317 | Msa1126780:three_prime_UTR |
| GCAATGGCCGGGGTGGACGC+GGG | 0.434998 | 7_3:+78325062 | Msa1126780:CDS |
| ATCGAGTTACCTTTGATTTG+AGG | 0.436352 | 7_3:-78323913 | None:intergenic |
| GCAGATCACGGTCAAGGTCT+AGG | 0.440577 | 7_3:+78327785 | Msa1126780:intron |
| GCCCTCTTCTGCATCCTGGC+AGG | 0.444232 | 7_3:+78325212 | Msa1126780:CDS |
| AATAAATAAAACCATATAAG+TGG | 0.446087 | 7_3:-78325681 | None:intergenic |
| TCCACAACAAATTGAGTTGT+AGG | 0.456640 | 7_3:-78327123 | None:intergenic |
| GAGGCTGCACATGGCGGTCG+TGG | 0.456810 | 7_3:+78325004 | Msa1126780:CDS |
| AGTTGAAGATTTGTTTATGA+AGG | 0.457526 | 7_3:+78324209 | Msa1126780:CDS |
| GACTCTAGAAGTCCTGGTCG+TGG | 0.466709 | 7_3:+78325982 | Msa1126780:CDS |
| TCGAGTTACCTTTGATTTGA+GGG | 0.466722 | 7_3:-78323912 | None:intergenic |
| GACTGCCCTCTTCTGCATCC+TGG | 0.467631 | 7_3:+78325208 | Msa1126780:CDS |
| ACCTCGACAAATGCATAGCC+AGG | 0.467853 | 7_3:-78324685 | None:intergenic |
| GTCAAACAGCAAATCTCCTA+AGG | 0.468070 | 7_3:+78326178 | Msa1126780:CDS |
| GATTGATTTGCAGGTACTAC+CGG | 0.470285 | 7_3:+78325605 | Msa1126780:intron |
| ACAGCAGTCACAGCAATGGC+CGG | 0.479635 | 7_3:+78325050 | Msa1126780:CDS |
| GAAATTGGAAATTAGGGACT+TGG | 0.485733 | 7_3:+78327082 | Msa1126780:CDS |
| CAGCAGTCACAGCAATGGCC+GGG | 0.486619 | 7_3:+78325051 | Msa1126780:CDS |
| ATTGGAAATTAGGGACTTGG+TGG | 0.490526 | 7_3:+78327085 | Msa1126780:CDS |
| GTCTAGGTCTCCATTACCTC+TGG | 0.491186 | 7_3:+78327801 | Msa1126780:CDS |
| TAAAGAGCGGGATCTAGATC+TGG | 0.494883 | 7_3:-78326261 | None:intergenic |
| CCGGACTGTCGCTACGGCTG+CGG | 0.506949 | 7_3:-78326053 | None:intergenic |
| GATCTTGCAGGAGATTTAGC+TGG | 0.507600 | 7_3:-78326221 | None:intergenic |
| CAATGGCCGGGGTGGACGCG+GGG | 0.514949 | 7_3:+78325063 | Msa1126780:CDS |
| ACCACGATATTCAGAGCGCC+TGG | 0.518470 | 7_3:-78325089 | None:intergenic |
| TGCAGGTACTACCGGGATTG+TGG | 0.518632 | 7_3:+78325613 | Msa1126780:intron |
| GCCTACAACTCAATTTGTTG+TGG | 0.522039 | 7_3:+78327122 | Msa1126780:CDS |
| TTGGAAATTAGGGACTTGGT+GGG | 0.523036 | 7_3:+78327086 | Msa1126780:CDS |
| CATAACTCACATTGACCTAA+AGG | 0.524766 | 7_3:+78324648 | Msa1126780:CDS |
| TCTCTTTCACGGATATCGCC+AGG | 0.525115 | 7_3:-78324186 | None:intergenic |
| GCAGGAGTCCAAGTAGGAGC+AGG | 0.530125 | 7_3:+78328100 | Msa1126780:CDS |
| AGGCGGGACTCTAGAAGTCC+TGG | 0.532405 | 7_3:+78325976 | Msa1126780:CDS |
| TGTTGCCGCGAGAGCTTCGA+AGG | 0.537192 | 7_3:-78323871 | None:intergenic |
| TCTCACCTTAAGATCCTGCC+AGG | 0.539635 | 7_3:-78325226 | None:intergenic |
| AGGATCACATGCGAAAAGCT+GGG | 0.542509 | 7_3:+78325327 | Msa1126780:intron |
| GCCGTAGCAAGAGTTTGTCC+AGG | 0.544644 | 7_3:+78328124 | Msa1126780:CDS |
| TCTACTACCATATAAAATCA+AGG | 0.545873 | 7_3:-78328448 | None:intergenic |
| TGCGGCTGCGACTACGACTG+CGG | 0.546200 | 7_3:-78326035 | None:intergenic |
| TTTCTTAGATTGGAAACTTG+CGG | 0.547983 | 7_3:+78327052 | Msa1126780:intron |
| CTTAAGATGCCCAAAGGCAC+AGG | 0.549576 | 7_3:-78328406 | None:intergenic |
| ACTCTAGAAGTCCTGGTCGT+GGG | 0.552106 | 7_3:+78325983 | Msa1126780:CDS |
| AGCAGTCACAGCAATGGCCG+GGG | 0.555032 | 7_3:+78325052 | Msa1126780:CDS |
| TGGATACCCCGCGTCCACCC+CGG | 0.555086 | 7_3:-78325069 | None:intergenic |
| ATTGATTTGCAGGTACTACC+GGG | 0.557644 | 7_3:+78325606 | Msa1126780:intron |
| GAATGAGAAGGCCCACGACC+AGG | 0.558643 | 7_3:-78325994 | None:intergenic |
| GTGCTAGCAGGAGTCCAAGT+AGG | 0.558874 | 7_3:+78328094 | Msa1126780:CDS |
| ACCTGGACAAACTCTTGCTA+CGG | 0.558954 | 7_3:-78328125 | None:intergenic |
| AAACCATATAAGTGGAGAAG+AGG | 0.564566 | 7_3:-78325673 | None:intergenic |
| TCCTGCCAGGATGCAGAAGA+GGG | 0.565631 | 7_3:-78325213 | None:intergenic |
| GATGCAATTCGCGGTCGTGA+TGG | 0.566019 | 7_3:+78324831 | Msa1126780:CDS |
| ATCATACCCTGATAAAGAGC+GGG | 0.566086 | 7_3:-78326273 | None:intergenic |
| TACAACTCAATTTGTTGTGG+AGG | 0.566703 | 7_3:+78327125 | Msa1126780:CDS |
| AAATACCTTCTGCTATGGCC+CGG | 0.567658 | 7_3:-78326072 | None:intergenic |
| GATTGTTACTAATGAAGAAG+TGG | 0.569587 | 7_3:+78328266 | Msa1126780:exon |
| TTACCAAGTGTGCCCAAACA+AGG | 0.570769 | 7_3:-78328489 | None:intergenic |
| GTTGGAAATACCTTCTGCTA+TGG | 0.570823 | 7_3:-78326077 | None:intergenic |
| GAGGGGTAAATGGGGATCGG+TGG | 0.571107 | 7_3:-78323894 | None:intergenic |
| CGAGTTACCTTTGATTTGAG+GGG | 0.572610 | 7_3:-78323911 | None:intergenic |
| CCATTTACCCCTCAAATCAA+AGG | 0.575871 | 7_3:+78323904 | Msa1126780:five_prime_UTR |
| CGCAGCCGTAGCGACAGTCC+GGG | 0.576383 | 7_3:+78326054 | Msa1126780:CDS |
| TCGAGCAGAACCGTGTATGT+TGG | 0.576534 | 7_3:+78324156 | Msa1126780:CDS |
| TTTGAGGGGTAAATGGGGAT+CGG | 0.577854 | 7_3:-78323897 | None:intergenic |
| ACGACCGCGAATTGCATCCT+CGG | 0.584181 | 7_3:-78324826 | None:intergenic |
| CTAGATCCCGCTCTTTATCA+GGG | 0.585371 | 7_3:+78326267 | Msa1126780:CDS |
| ATCCTGCCAGGATGCAGAAG+AGG | 0.589165 | 7_3:-78325214 | None:intergenic |
| ACAGTCCGGGCCATAGCAGA+AGG | 0.593328 | 7_3:+78326067 | Msa1126780:CDS |
| TCATACACGAACGTAAGACT+TGG | 0.593435 | 7_3:-78325847 | None:intergenic |
| TTTAGCTGGTGAACGTTGTG+TGG | 0.599751 | 7_3:-78326207 | None:intergenic |
| CGTGGGCCTTCTCATTCTAG+AGG | 0.605800 | 7_3:+78326000 | Msa1126780:CDS |
| TATGGCCCGGACTGTCGCTA+CGG | 0.607162 | 7_3:-78326059 | None:intergenic |
| CCTCGACAAATGCATAGCCA+GGG | 0.607600 | 7_3:-78324684 | None:intergenic |
| AGGTGAGGGAATATGATTCG+AGG | 0.609002 | 7_3:+78325956 | Msa1126780:intron |
| GATGCCGAGGATGCAATTCG+CGG | 0.609063 | 7_3:+78324822 | Msa1126780:CDS |
| TCAAACAGCAAATCTCCTAA+GGG | 0.610559 | 7_3:+78326179 | Msa1126780:CDS |
| GTGTATGTTGGAAATCTACC+TGG | 0.612904 | 7_3:+78324168 | Msa1126780:CDS |
| GAGGGAATATGATTCGAGGC+GGG | 0.617120 | 7_3:+78325960 | Msa1126780:CDS |
| TTATAGGTGGAGGCTGCACA+TGG | 0.617981 | 7_3:+78324995 | Msa1126780:intron |
| CTTCTTCCTCTAGAATGAGA+AGG | 0.622211 | 7_3:-78326006 | None:intergenic |
| CGATACAGCAGTCACAGCAA+TGG | 0.624303 | 7_3:+78325046 | Msa1126780:CDS |
| GTTTGTGTAATCCACAATCC+CGG | 0.625161 | 7_3:-78325624 | None:intergenic |
| TGAAGATGTTCAAGATGCCG+AGG | 0.626553 | 7_3:+78324809 | Msa1126780:CDS |
| ACTAATGAAGAAGTGGATGA+TGG | 0.627701 | 7_3:+78328273 | Msa1126780:three_prime_UTR |
| CCCTGGCTATGCATTTGTCG+AGG | 0.628385 | 7_3:+78324684 | Msa1126780:CDS |
| GGATCACATGCGAAAAGCTG+GGG | 0.630537 | 7_3:+78325328 | Msa1126780:intron |
| TTTGATTTGAGGGGTAAATG+GGG | 0.638595 | 7_3:-78323902 | None:intergenic |
| AGGTAGATTTCCAACATACA+CGG | 0.648245 | 7_3:-78324166 | None:intergenic |
| TCCAGGCGCTCTGAATATCG+TGG | 0.656235 | 7_3:+78325088 | Msa1126780:CDS |
| AGTCACAGCAATGGCCGGGG+TGG | 0.660201 | 7_3:+78325055 | Msa1126780:CDS |
| CTCGACAAATGCATAGCCAG+GGG | 0.667713 | 7_3:-78324683 | None:intergenic |
| TATCATACCCTGATAAAGAG+CGG | 0.674577 | 7_3:-78326274 | None:intergenic |
| TGAGGGAATATGATTCGAGG+CGG | 0.676478 | 7_3:+78325959 | Msa1126780:CDS |
| TCATAACTTAAGATGCCCAA+AGG | 0.677674 | 7_3:-78328412 | None:intergenic |
| TTGACCTAAAGGTTCCGCCA+AGG | 0.681450 | 7_3:+78324659 | Msa1126780:CDS |
| TAGGTGGAGGCTGCACATGG+CGG | 0.727287 | 7_3:+78324998 | Msa1126780:intron |
| TCGACAAATGCATAGCCAGG+GGG | 0.752456 | 7_3:-78324682 | None:intergenic |
| GAAGTGGATGATGGTCAGTG+TGG | 0.762376 | 7_3:+78328282 | Msa1126780:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTATTATGTTTTATTTG+AGG | + | chr7_3:78325129-78325148 | Msa1126780:intron | 10.0% |
| !! | GAAAGAAAAAAATTAAAATA+TGG | - | chr7_3:78326142-78326161 | None:intergenic | 10.0% |
| !!! | AAGCATTTTAATTATTTATT+TGG | + | chr7_3:78326381-78326400 | Msa1126780:intron | 10.0% |
| !! | AAGAAAAAAAATATTAAAAG+AGG | - | chr7_3:78326880-78326899 | None:intergenic | 10.0% |
| !!! | CAAAACATTTTTTATTTATA+AGG | - | chr7_3:78328536-78328555 | None:intergenic | 10.0% |
| !! | GATAAAAAAATGAAATTGAA+GGG | - | chr7_3:78323965-78323984 | None:intergenic | 15.0% |
| !! | TGATAAAAAAATGAAATTGA+AGG | - | chr7_3:78323966-78323985 | None:intergenic | 15.0% |
| !!! | TTGATTATTTAATTTGTTAC+AGG | + | chr7_3:78324113-78324132 | Msa1126780:intron | 15.0% |
| !! | TTAAAGTAGGATTTAAATTA+AGG | + | chr7_3:78324418-78324437 | Msa1126780:intron | 15.0% |
| !! | AAAAAAAAAAAAGCAAAACA+GGG | - | chr7_3:78324745-78324764 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAAAAGCAAAAC+AGG | - | chr7_3:78324746-78324765 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAATCCTAATAG+AGG | + | chr7_3:78324770-78324789 | Msa1126780:intron | 15.0% |
| !! | TTAAACAGTATTAAGAATTA+AGG | - | chr7_3:78324965-78324984 | None:intergenic | 15.0% |
| !! | GTTTAAATTTGTATGTTTAT+AGG | + | chr7_3:78324979-78324998 | Msa1126780:intron | 15.0% |
| !! | ACTAATACATAAAATCTAAA+GGG | - | chr7_3:78325429-78325448 | None:intergenic | 15.0% |
| !! | TACTAATACATAAAATCTAA+AGG | - | chr7_3:78325430-78325449 | None:intergenic | 15.0% |
| !! | AATAAATAAAACCATATAAG+TGG | - | chr7_3:78325684-78325703 | None:intergenic | 15.0% |
| !!! | TATGGTTTTATTTATTTTGA+AGG | + | chr7_3:78325688-78325707 | Msa1126780:intron | 15.0% |
| !!! | TTACACTTTTAATAAAAGAA+GGG | - | chr7_3:78326808-78326827 | None:intergenic | 15.0% |
| !! | GAAAGAAAAAAAAATGATAT+GGG | - | chr7_3:78326935-78326954 | None:intergenic | 15.0% |
| !! | TGAAAGAAAAAAAAATGATA+TGG | - | chr7_3:78326936-78326955 | None:intergenic | 15.0% |
| !! | ATAAATAAAATCATTAGTTG+AGG | - | chr7_3:78328046-78328065 | None:intergenic | 15.0% |
| !!! | TTTTTAGGGTTTTAATTTTG+GGG | - | chr7_3:78323851-78323870 | None:intergenic | 20.0% |
| !!! | GTTTTTAGGGTTTTAATTTT+GGG | - | chr7_3:78323852-78323871 | None:intergenic | 20.0% |
| !!! | TAATTTTTTTCAACCAATTG+TGG | - | chr7_3:78324070-78324089 | None:intergenic | 20.0% |
| !!! | AAATTAAGGTGGTTTTTTTA+TGG | + | chr7_3:78324432-78324451 | Msa1126780:intron | 20.0% |
| !!! | TAATGTTTTGTTGGAATTTT+CGG | + | chr7_3:78324571-78324590 | Msa1126780:intron | 20.0% |
| !! | AAAAGTGAAATACATAAGAT+AGG | - | chr7_3:78324616-78324635 | None:intergenic | 20.0% |
| !! | AGTTATAAGATTATTAAAGC+AGG | - | chr7_3:78324906-78324925 | None:intergenic | 20.0% |
| !! | TAAATTTGTATGTTTATAGG+TGG | + | chr7_3:78324982-78325001 | Msa1126780:intron | 20.0% |
| !! | GAATAACTTATCTAACAAAA+TGG | - | chr7_3:78325265-78325284 | None:intergenic | 20.0% |
| !!! | ATTTATTTTGAAGGATATCA+TGG | + | chr7_3:78325697-78325716 | Msa1126780:intron | 20.0% |
| !! | ACAATCTAGATAATTATAAG+AGG | - | chr7_3:78325753-78325772 | None:intergenic | 20.0% |
| !!! | AAGTTTTAACAATCAAATTC+AGG | - | chr7_3:78325873-78325892 | None:intergenic | 20.0% |
| !! | AAATATGGAATCTTTATAGA+AGG | - | chr7_3:78326127-78326146 | None:intergenic | 20.0% |
| !!! | TTGATAATGAACAGAATAAA+AGG | + | chr7_3:78326498-78326517 | Msa1126780:intron | 20.0% |
| !! | TTTAAGAAAACAAGTTTACT+AGG | - | chr7_3:78326783-78326802 | None:intergenic | 20.0% |
| !!! | GTTACACTTTTAATAAAAGA+AGG | - | chr7_3:78326809-78326828 | None:intergenic | 20.0% |
| !! | AAAAAAAAATGATATGGGAA+GGG | - | chr7_3:78326930-78326949 | None:intergenic | 20.0% |
| !!! | GATTTATACTATGTTATTTG+TGG | + | chr7_3:78327755-78327774 | Msa1126780:intron | 20.0% |
| !!! | GTGTCTTTATTAATTTTGTT+TGG | + | chr7_3:78328190-78328209 | Msa1126780:intron | 20.0% |
| !!! | TTTCTAGTAATATTTGACTT+TGG | + | chr7_3:78328317-78328336 | Msa1126780:three_prime_UTR | 20.0% |
| !!! | TTTTAGGGTTTTAATTTTGG+GGG | - | chr7_3:78323850-78323869 | None:intergenic | 25.0% |
| !!! | GGTTTTTAGGGTTTTAATTT+TGG | - | chr7_3:78323853-78323872 | None:intergenic | 25.0% |
| !! | AGTTGAAGATTTGTTTATGA+AGG | + | chr7_3:78324209-78324228 | Msa1126780:CDS | 25.0% |
| !!! | TCTGCTTTTTAATTTTGATC+TGG | + | chr7_3:78324249-78324268 | Msa1126780:intron | 25.0% |
| ! | TATAAATCATAGCAAGCTTA+TGG | - | chr7_3:78324354-78324373 | None:intergenic | 25.0% |
| ! | CAATAAAATTAAGCCAATGT+AGG | - | chr7_3:78324377-78324396 | None:intergenic | 25.0% |
| !! | TTAATTTTATTGACCAAGTG+TGG | + | chr7_3:78324385-78324404 | Msa1126780:intron | 25.0% |
| ! | AAGTAGGATTTAAATTAAGG+TGG | + | chr7_3:78324421-78324440 | Msa1126780:intron | 25.0% |
| ! | TATGGATGATAATTTCACTA+AGG | + | chr7_3:78324450-78324469 | Msa1126780:intron | 25.0% |
| !! | ACATGTGATTAATGTTTTGT+TGG | + | chr7_3:78324562-78324581 | Msa1126780:intron | 25.0% |
| !!! | TGTATTTCACTTTTGTAGTA+TGG | + | chr7_3:78324622-78324641 | Msa1126780:intron | 25.0% |
| !!! | GTTTTATTTGAGGATGTTTT+TGG | + | chr7_3:78325139-78325158 | Msa1126780:intron | 25.0% |
| ! | TAATATAATAGATGCCAGAA+GGG | - | chr7_3:78325498-78325517 | None:intergenic | 25.0% |
| ! | TATTAGTTCCGTCTATATTA+TGG | + | chr7_3:78325513-78325532 | Msa1126780:intron | 25.0% |
| !!! | ATATATTGTGATTGATTTGC+AGG | + | chr7_3:78325596-78325615 | Msa1126780:intron | 25.0% |
| ! | ATGAACAGAATAAAAGGAAT+TGG | + | chr7_3:78326504-78326523 | Msa1126780:intron | 25.0% |
| !! | AATTCATGCATATCTTTTCT+TGG | + | chr7_3:78326553-78326572 | Msa1126780:intron | 25.0% |
| ! | GAAAAAAAAATGATATGGGA+AGG | - | chr7_3:78326931-78326950 | None:intergenic | 25.0% |
| !! | GGAATTTTCACAAAAACAAA+AGG | - | chr7_3:78327025-78327044 | None:intergenic | 25.0% |
| !!! | TCCTTTGTTTTTTCTTAGAT+TGG | + | chr7_3:78327042-78327061 | Msa1126780:intron | 25.0% |
| ! | TCCAATCTAAGAAAAAACAA+AGG | - | chr7_3:78327046-78327065 | None:intergenic | 25.0% |
| ! | ATACTGGAAATTGGAAATTA+GGG | + | chr7_3:78327076-78327095 | Msa1126780:CDS | 25.0% |
| ! | TTAGAACAAATGTACTATGA+GGG | - | chr7_3:78327183-78327202 | None:intergenic | 25.0% |
| ! | ATTAGAACAAATGTACTATG+AGG | - | chr7_3:78327184-78327203 | None:intergenic | 25.0% |
| ! | TCTTGTGTTAAAAGGAAATT+AGG | + | chr7_3:78327281-78327300 | Msa1126780:intron | 25.0% |
| ! | GTTAAAAGGAAATTAGGATT+TGG | + | chr7_3:78327287-78327306 | Msa1126780:intron | 25.0% |
| ! | GGATAATTTCATTACAATTG+CGG | + | chr7_3:78327333-78327352 | Msa1126780:intron | 25.0% |
| ! | GATAATTTCATTACAATTGC+GGG | + | chr7_3:78327334-78327353 | Msa1126780:intron | 25.0% |
| ! | ATGATAAATAAACAATCCCA+AGG | - | chr7_3:78327463-78327482 | None:intergenic | 25.0% |
| !!! | ATTTGTTTTTTTACCTCTCT+TGG | + | chr7_3:78327573-78327592 | Msa1126780:intron | 25.0% |
| !!! | TTTGTTTTTTTACCTCTCTT+GGG | + | chr7_3:78327574-78327593 | Msa1126780:intron | 25.0% |
| !!! | ATTTGTTTTTTTACCTCTCT+TGG | + | chr7_3:78327573-78327592 | Msa1126780:intron | 25.0% |
| !!! | TTTGTTTTTTTACCTCTCTT+GGG | + | chr7_3:78327574-78327593 | Msa1126780:intron | 25.0% |
| ! | TGTTGGATCAAATTTGATAA+GGG | + | chr7_3:78327724-78327743 | Msa1126780:intron | 25.0% |
| ! | GAAGCAAATTAAATGTTCAA+TGG | - | chr7_3:78327848-78327867 | None:intergenic | 25.0% |
| ! | AAAACTATACGTAACTTTCT+TGG | - | chr7_3:78328004-78328023 | None:intergenic | 25.0% |
| !! | AAGAAAGTTACGTATAGTTT+TGG | + | chr7_3:78328003-78328022 | Msa1126780:intron | 25.0% |
| !!! | TACGTATAGTTTTGGTATTT+TGG | + | chr7_3:78328011-78328030 | Msa1126780:intron | 25.0% |
| !!! | ACGTATAGTTTTGGTATTTT+GGG | + | chr7_3:78328012-78328031 | Msa1126780:intron | 25.0% |
| ! | CATGGCAATTTCATTAAAAA+AGG | - | chr7_3:78328164-78328183 | None:intergenic | 25.0% |
| ! | TATTTGAACTTTAAACTCTC+TGG | + | chr7_3:78328367-78328386 | Msa1126780:three_prime_UTR | 25.0% |
| ! | TTAAGTTATGAGGAATTTGA+TGG | + | chr7_3:78328424-78328443 | Msa1126780:three_prime_UTR | 25.0% |
| ! | TCTACTACCATATAAAATCA+AGG | - | chr7_3:78328451-78328470 | None:intergenic | 25.0% |
| ! | TAGTAGATTGTTGAACTATT+TGG | + | chr7_3:78328464-78328483 | Msa1126780:three_prime_UTR | 25.0% |
| !!! | TTTAGGGTTTTAATTTTGGG+GGG | - | chr7_3:78323849-78323868 | None:intergenic | 30.0% |
| ATCAAAGGTAACTCGATATT+AGG | + | chr7_3:78323919-78323938 | Msa1126780:intron | 30.0% | |
| TCAAAGGTAACTCGATATTA+GGG | + | chr7_3:78323920-78323939 | Msa1126780:intron | 30.0% | |
| AATCTTCAACTTCTCTTTCA+CGG | - | chr7_3:78324200-78324219 | None:intergenic | 30.0% | |
| GCTATGATTTATACCTACAT+TGG | + | chr7_3:78324361-78324380 | Msa1126780:intron | 30.0% | |
| TGGATTTCACTAGTTAAAGT+AGG | + | chr7_3:78324405-78324424 | Msa1126780:intron | 30.0% | |
| !! | CATAAAGTTGTTTTCTGATG+TGG | + | chr7_3:78324516-78324535 | Msa1126780:intron | 30.0% |
| GCAAAAATAAGACCTCTATT+AGG | - | chr7_3:78324785-78324804 | None:intergenic | 30.0% | |
| !! | GTGATGGTTATGATTTTGAT+GGG | + | chr7_3:78324847-78324866 | Msa1126780:CDS | 30.0% |
| AATTGCTTATACCAGAAGAA+TGG | + | chr7_3:78324928-78324947 | Msa1126780:intron | 30.0% | |
| ATTTGTATGTTTATAGGTGG+AGG | + | chr7_3:78324985-78325004 | Msa1126780:intron | 30.0% | |
| !!! | GGTATGCTTTTGAAATCATT+TGG | + | chr7_3:78325160-78325179 | Msa1126780:intron | 30.0% |
| AATAGTGGTTTCTTAAATGC+AGG | + | chr7_3:78325307-78325326 | Msa1126780:intron | 30.0% | |
| ! | TTTTCCCAAGTTTTTCATGA+TGG | + | chr7_3:78325359-78325378 | Msa1126780:CDS | 30.0% |
| AATATAATAGATGCCAGAAG+GGG | - | chr7_3:78325497-78325516 | None:intergenic | 30.0% | |
| CTAATATAATAGATGCCAGA+AGG | - | chr7_3:78325499-78325518 | None:intergenic | 30.0% | |
| ! | TAAGAGTCTAAGATACATGT+TGG | - | chr7_3:78326098-78326117 | None:intergenic | 30.0% |
| TGGGGTACATTCTTTAATTA+TGG | + | chr7_3:78326472-78326491 | Msa1126780:intron | 30.0% | |
| GGGGTACATTCTTTAATTAT+GGG | + | chr7_3:78326473-78326492 | Msa1126780:intron | 30.0% | |
| TTGTCTTTGTCCTATTTAAC+AGG | + | chr7_3:78326630-78326649 | Msa1126780:intron | 30.0% | |
| TGTCCTATTTAACAGGTTAA+AGG | + | chr7_3:78326637-78326656 | Msa1126780:intron | 30.0% | |
| ACTCCTTTAACCTGTTAAAT+AGG | - | chr7_3:78326643-78326662 | None:intergenic | 30.0% | |
| !!! | AAAGTTATTTTTGCCATCTG+TGG | + | chr7_3:78326739-78326758 | Msa1126780:intron | 30.0% |
| TGAAAGAAAACATTCCAACA+TGG | - | chr7_3:78326998-78327017 | None:intergenic | 30.0% | |
| TTTCTTAGATTGGAAACTTG+CGG | + | chr7_3:78327052-78327071 | Msa1126780:intron | 30.0% | |
| CATACTGGAAATTGGAAATT+AGG | + | chr7_3:78327075-78327094 | Msa1126780:CDS | 30.0% | |
| !! | AGGTATGGTATTTTTCAGAT+GGG | + | chr7_3:78327145-78327164 | Msa1126780:intron | 30.0% |
| GTGTCTTAATGTTTAACCTT+GGG | + | chr7_3:78327444-78327463 | Msa1126780:intron | 30.0% | |
| CTGTTGGATCAAATTTGATA+AGG | + | chr7_3:78327723-78327742 | Msa1126780:intron | 30.0% | |
| AAATTTGATAAGGGAACTTG+TGG | + | chr7_3:78327733-78327752 | Msa1126780:intron | 30.0% | |
| TAATAAAGACACGAAATGCA+TGG | - | chr7_3:78328182-78328201 | None:intergenic | 30.0% | |
| !!! | ATGCTTAACCCTATTTTGAT+CGG | + | chr7_3:78328219-78328238 | Msa1126780:intron | 30.0% |
| GATTGTTACTAATGAAGAAG+TGG | + | chr7_3:78328266-78328285 | Msa1126780:exon | 30.0% | |
| TTGGCTGAGAAATACTTATT+TGG | + | chr7_3:78328336-78328355 | Msa1126780:three_prime_UTR | 30.0% | |
| TGGCTGAGAAATACTTATTT+GGG | + | chr7_3:78328337-78328356 | Msa1126780:three_prime_UTR | 30.0% | |
| !! | TGATGGACCTTGATTTTATA+TGG | + | chr7_3:78328441-78328460 | Msa1126780:three_prime_UTR | 30.0% |
| ! | AACTATTTGGTTCCTTGTTT+GGG | + | chr7_3:78328477-78328496 | Msa1126780:three_prime_UTR | 30.0% |
| !! | TTTGATTTGAGGGGTAAATG+GGG | - | chr7_3:78323905-78323924 | None:intergenic | 35.0% |
| !! | CTTTGATTTGAGGGGTAAAT+GGG | - | chr7_3:78323906-78323925 | None:intergenic | 35.0% |
| !! | TCGAGTTACCTTTGATTTGA+GGG | - | chr7_3:78323915-78323934 | None:intergenic | 35.0% |
| !! | ATCGAGTTACCTTTGATTTG+AGG | - | chr7_3:78323916-78323935 | None:intergenic | 35.0% |
| GTTCTTGAGTTTACCACAAT+TGG | + | chr7_3:78324054-78324073 | Msa1126780:intron | 35.0% | |
| AGGTAGATTTCCAACATACA+CGG | - | chr7_3:78324169-78324188 | None:intergenic | 35.0% | |
| TTCAGCATATCTCACTAGTT+AGG | + | chr7_3:78324275-78324294 | Msa1126780:intron | 35.0% | |
| TCAGCATATCTCACTAGTTA+GGG | + | chr7_3:78324276-78324295 | Msa1126780:intron | 35.0% | |
| ! | TATCTCACTAGTTAGGGTTT+TGG | + | chr7_3:78324282-78324301 | Msa1126780:intron | 35.0% |
| TAACTAGTGAAATCCACACT+TGG | - | chr7_3:78324401-78324420 | None:intergenic | 35.0% | |
| ! | AACCTTTTCTTGGTCTCTTT+TGG | + | chr7_3:78324481-78324500 | Msa1126780:intron | 35.0% |
| ! | ACCTTTTCTTGGTCTCTTTT+GGG | + | chr7_3:78324482-78324501 | Msa1126780:intron | 35.0% |
| CATAACTCACATTGACCTAA+AGG | + | chr7_3:78324648-78324667 | Msa1126780:CDS | 35.0% | |
| ! | CGTGATGGTTATGATTTTGA+TGG | + | chr7_3:78324846-78324865 | Msa1126780:CDS | 35.0% |
| AGATATAACCAACCCGTAAT+CGG | - | chr7_3:78324875-78324894 | None:intergenic | 35.0% | |
| ATTGACTAGAACTGCAAAAG+AGG | - | chr7_3:78325187-78325206 | None:intergenic | 35.0% | |
| !! | TCTTTTGCAGTTCTAGTCAA+TGG | + | chr7_3:78325186-78325205 | Msa1126780:intron | 35.0% |
| !! | CATCAATACTGACTCAATAG+TGG | + | chr7_3:78325292-78325311 | Msa1126780:intron | 35.0% |
| CCTTCCATCATGAAAAACTT+GGG | - | chr7_3:78325366-78325385 | None:intergenic | 35.0% | |
| !! | CCAAGTTTTTCATGATGGAA+GGG | + | chr7_3:78325364-78325383 | Msa1126780:CDS | 35.0% |
| !! | CAAGTTTTTCATGATGGAAG+GGG | + | chr7_3:78325365-78325384 | Msa1126780:CDS | 35.0% |
| ATATAATAGATGCCAGAAGG+GGG | - | chr7_3:78325496-78325515 | None:intergenic | 35.0% | |
| TAGTTCCGTCTATATTATGG+TGG | + | chr7_3:78325516-78325535 | Msa1126780:intron | 35.0% | |
| AGATGCCACCATAATATAGA+CGG | - | chr7_3:78325524-78325543 | None:intergenic | 35.0% | |
| AAATATCTCACTTCTCTGAC+AGG | - | chr7_3:78325550-78325569 | None:intergenic | 35.0% | |
| AAACCATATAAGTGGAGAAG+AGG | - | chr7_3:78325676-78325695 | None:intergenic | 35.0% | |
| !! | AAGACTTGGAAAAAGCATTC+CGG | - | chr7_3:78325836-78325855 | None:intergenic | 35.0% |
| TCAAACAGCAAATCTCCTAA+GGG | + | chr7_3:78326179-78326198 | Msa1126780:CDS | 35.0% | |
| TATCATACCCTGATAAAGAG+CGG | - | chr7_3:78326277-78326296 | None:intergenic | 35.0% | |
| ! | GTCTGTTACTATGTTTCTGA+TGG | + | chr7_3:78326321-78326340 | Msa1126780:intron | 35.0% |
| !! | TCTATTGTTTTGTCCTAGTG+AGG | + | chr7_3:78326603-78326622 | Msa1126780:intron | 35.0% |
| TTAACAGGTTAAAGGAGTTG+AGG | + | chr7_3:78326645-78326664 | Msa1126780:intron | 35.0% | |
| !!! | GCATTTTTTTTCCTTCGTCA+GGG | - | chr7_3:78326677-78326696 | None:intergenic | 35.0% |
| !!! | AGCATTTTTTTTCCTTCGTC+AGG | - | chr7_3:78326678-78326697 | None:intergenic | 35.0% |
| TATCAACATGAAACCACAGA+TGG | - | chr7_3:78326755-78326774 | None:intergenic | 35.0% | |
| AAGAAAACATTCCAACATGG+AGG | - | chr7_3:78326995-78327014 | None:intergenic | 35.0% | |
| GAAATTGGAAATTAGGGACT+TGG | + | chr7_3:78327082-78327101 | Msa1126780:CDS | 35.0% | |
| ! | TCCACAACAAATTGAGTTGT+AGG | - | chr7_3:78327126-78327145 | None:intergenic | 35.0% |
| !! | TACAACTCAATTTGTTGTGG+AGG | + | chr7_3:78327125-78327144 | Msa1126780:CDS | 35.0% |
| !! | GAGGTATGGTATTTTTCAGA+TGG | + | chr7_3:78327144-78327163 | Msa1126780:intron | 35.0% |
| ! | TTTTAGCATGTAAATGTCCG+TGG | + | chr7_3:78327206-78327225 | Msa1126780:intron | 35.0% |
| TTTAGCATGTAAATGTCCGT+GGG | + | chr7_3:78327207-78327226 | Msa1126780:intron | 35.0% | |
| ATTGGGAAACAAAGAGATCA+TGG | + | chr7_3:78327236-78327255 | Msa1126780:intron | 35.0% | |
| ! | CAAGAAATCCAGCTCTAATA+TGG | - | chr7_3:78327266-78327285 | None:intergenic | 35.0% |
| GCTGGATTTCTTGTGTTAAA+AGG | + | chr7_3:78327273-78327292 | Msa1126780:intron | 35.0% | |
| AAATTATCCCTAGTGCTCAT+TGG | - | chr7_3:78327322-78327341 | None:intergenic | 35.0% | |
| GGTGTCTTAATGTTTAACCT+TGG | + | chr7_3:78327443-78327462 | Msa1126780:intron | 35.0% | |
| GCCAAAGAACGAAATGTTAT+GGG | - | chr7_3:78327519-78327538 | None:intergenic | 35.0% | |
| AGCCAAAGAACGAAATGTTA+TGG | - | chr7_3:78327520-78327539 | None:intergenic | 35.0% | |
| !!! | TTCTTTGGCTTTTTCTCTGT+TGG | + | chr7_3:78327530-78327549 | Msa1126780:intron | 35.0% |
| !!! | TCTTTGGCTTTTTCTCTGTT+GGG | + | chr7_3:78327531-78327550 | Msa1126780:intron | 35.0% |
| AATCAACACATGTTCTGATG+TGG | + | chr7_3:78327903-78327922 | Msa1126780:intron | 35.0% | |
| ! | ACTCTAGTTTCCTTACAGAT+GGG | - | chr7_3:78327929-78327948 | None:intergenic | 35.0% |
| ! | AACTCTAGTTTCCTTACAGA+TGG | - | chr7_3:78327930-78327949 | None:intergenic | 35.0% |
| ! | TTCTTTGTGCAAGAAGTACA+TGG | + | chr7_3:78327949-78327968 | Msa1126780:intron | 35.0% |
| ! | TCTTTGTGCAAGAAGTACAT+GGG | + | chr7_3:78327950-78327969 | Msa1126780:intron | 35.0% |
| !!! | TGCTTAACCCTATTTTGATC+GGG | + | chr7_3:78328220-78328239 | Msa1126780:intron | 35.0% |
| ACTAATGAAGAAGTGGATGA+TGG | + | chr7_3:78328273-78328292 | Msa1126780:three_prime_UTR | 35.0% | |
| TCATAACTTAAGATGCCCAA+AGG | - | chr7_3:78328415-78328434 | None:intergenic | 35.0% | |
| TTTGGGCATCTTAAGTTATG+AGG | + | chr7_3:78328414-78328433 | Msa1126780:three_prime_UTR | 35.0% | |
| ! | GAACTATTTGGTTCCTTGTT+TGG | + | chr7_3:78328476-78328495 | Msa1126780:three_prime_UTR | 35.0% |
| ! | GAGAGCTTCGAAGGTTTTTA+GGG | - | chr7_3:78323865-78323884 | None:intergenic | 40.0% |
| !! | CCTTTGATTTGAGGGGTAAA+TGG | - | chr7_3:78323907-78323926 | None:intergenic | 40.0% |
| CCATTTACCCCTCAAATCAA+AGG | + | chr7_3:78323904-78323923 | Msa1126780:five_prime_UTR | 40.0% | |
| !! | CGAGTTACCTTTGATTTGAG+GGG | - | chr7_3:78323914-78323933 | None:intergenic | 40.0% |
| TCGTAGATGAAGAAATTCGC+AGG | - | chr7_3:78324000-78324019 | None:intergenic | 40.0% | |
| ! | TCTCGCTGAATTTTGCTTCA+CGG | + | chr7_3:78324032-78324051 | Msa1126780:intron | 40.0% |
| GTGTATGTTGGAAATCTACC+TGG | + | chr7_3:78324168-78324187 | Msa1126780:CDS | 40.0% | |
| ! | GGAACACTTGAACCTTTTCT+TGG | + | chr7_3:78324471-78324490 | Msa1126780:intron | 40.0% |
| TCCCAAAAGAGACCAAGAAA+AGG | - | chr7_3:78324486-78324505 | None:intergenic | 40.0% | |
| ! | AGGTGAGTTGGAAGTTACAT+AGG | + | chr7_3:78324704-78324723 | Msa1126780:intron | 40.0% |
| !!! | ATTTTGATGGGCACCGATTA+CGG | + | chr7_3:78324859-78324878 | Msa1126780:CDS | 40.0% |
| TTATCGTGTTGCCATTCTTC+TGG | - | chr7_3:78324942-78324961 | None:intergenic | 40.0% | |
| !! | CCCAAGTTTTTCATGATGGA+AGG | + | chr7_3:78325363-78325382 | Msa1126780:CDS | 40.0% |
| CCCTTCCATCATGAAAAACT+TGG | - | chr7_3:78325367-78325386 | None:intergenic | 40.0% | |
| !! | TTTTCATGATGGAAGGGGTA+CGG | + | chr7_3:78325370-78325389 | Msa1126780:intron | 40.0% |
| TGCTTATTTATTCCCCCTTC+TGG | + | chr7_3:78325481-78325500 | Msa1126780:intron | 40.0% | |
| !! | GATTGATTTGCAGGTACTAC+CGG | + | chr7_3:78325605-78325624 | Msa1126780:intron | 40.0% |
| !! | ATTGATTTGCAGGTACTACC+GGG | + | chr7_3:78325606-78325625 | Msa1126780:intron | 40.0% |
| GTTTGTGTAATCCACAATCC+CGG | - | chr7_3:78325627-78325646 | None:intergenic | 40.0% | |
| TCATACACGAACGTAAGACT+TGG | - | chr7_3:78325850-78325869 | None:intergenic | 40.0% | |
| TCATATTCCCTCACCTACAT+GGG | - | chr7_3:78325952-78325971 | None:intergenic | 40.0% | |
| ATCATATTCCCTCACCTACA+TGG | - | chr7_3:78325953-78325972 | None:intergenic | 40.0% | |
| !! | CTTCTTCCTCTAGAATGAGA+AGG | - | chr7_3:78326009-78326028 | None:intergenic | 40.0% |
| GTTGGAAATACCTTCTGCTA+TGG | - | chr7_3:78326080-78326099 | None:intergenic | 40.0% | |
| GTCAAACAGCAAATCTCCTA+AGG | + | chr7_3:78326178-78326197 | Msa1126780:CDS | 40.0% | |
| ATCATACCCTGATAAAGAGC+GGG | - | chr7_3:78326276-78326295 | None:intergenic | 40.0% | |
| CCTATTAATGTGCCTCCTAT+GGG | - | chr7_3:78326447-78326466 | None:intergenic | 40.0% | |
| ACCTATTAATGTGCCTCCTA+TGG | - | chr7_3:78326448-78326467 | None:intergenic | 40.0% | |
| AGGCACATTAATAGGTTGCA+TGG | + | chr7_3:78326452-78326471 | Msa1126780:intron | 40.0% | |
| GGCACATTAATAGGTTGCAT+GGG | + | chr7_3:78326453-78326472 | Msa1126780:intron | 40.0% | |
| GCACATTAATAGGTTGCATG+GGG | + | chr7_3:78326454-78326473 | Msa1126780:intron | 40.0% | |
| CAAAGACAATTGACCTCACT+AGG | - | chr7_3:78326619-78326638 | None:intergenic | 40.0% | |
| TCATACATGCATTGTTCGTC+CGG | + | chr7_3:78326953-78326972 | Msa1126780:intron | 40.0% | |
| ATTGGAAATTAGGGACTTGG+TGG | + | chr7_3:78327085-78327104 | Msa1126780:CDS | 40.0% | |
| ! | TTGGAAATTAGGGACTTGGT+GGG | + | chr7_3:78327086-78327105 | Msa1126780:CDS | 40.0% |
| !! | GCCTACAACTCAATTTGTTG+TGG | + | chr7_3:78327122-78327141 | Msa1126780:CDS | 40.0% |
| !! | CTCAATTTGTTGTGGAGGTA+TGG | + | chr7_3:78327130-78327149 | Msa1126780:intron | 40.0% |
| !! | ATTTTTCAGATGGGCGACTT+TGG | + | chr7_3:78327154-78327173 | Msa1126780:intron | 40.0% |
| ! | ATGGATTGCCATATTAGAGC+TGG | + | chr7_3:78327255-78327274 | Msa1126780:intron | 40.0% |
| TCAAGATTTGCCAAGCCAAT+AGG | + | chr7_3:78327359-78327378 | Msa1126780:intron | 40.0% | |
| CAAGATTTGCCAAGCCAATA+GGG | + | chr7_3:78327360-78327379 | Msa1126780:intron | 40.0% | |
| TATCCGGATTCTCTGGATTA+TGG | + | chr7_3:78327388-78327407 | Msa1126780:intron | 40.0% | |
| ATTCTCTGGATTATGGTGCA+GGG | + | chr7_3:78327395-78327414 | Msa1126780:intron | 40.0% | |
| ! | ATTTCTTTTCTCCAGTCTGC+TGG | + | chr7_3:78327422-78327441 | Msa1126780:intron | 40.0% |
| GCCCATAACATTTCGTTCTT+TGG | + | chr7_3:78327515-78327534 | Msa1126780:intron | 40.0% | |
| ATCAAGGCTGTTGGATCAAT+TGG | + | chr7_3:78327623-78327642 | Msa1126780:intron | 40.0% | |
| TCAAGGCTGTTGGATCAATT+GGG | + | chr7_3:78327624-78327643 | Msa1126780:intron | 40.0% | |
| ! | TGTGGAACTTTTGCAGATCA+CGG | + | chr7_3:78327773-78327792 | Msa1126780:intron | 40.0% |
| AATTCACTCACCAGAGGTAA+TGG | - | chr7_3:78327814-78327833 | None:intergenic | 40.0% | |
| AGAGAAAATTCACTCACCAG+AGG | - | chr7_3:78327820-78327839 | None:intergenic | 40.0% | |
| TTGCTTCTTGTGCCTTGTAA+TGG | + | chr7_3:78327861-78327880 | Msa1126780:intron | 40.0% | |
| ACACTAATGCAGCCATTACA+AGG | - | chr7_3:78327876-78327895 | None:intergenic | 40.0% | |
| ACCAAGTCCCGATCAAAATA+GGG | - | chr7_3:78328230-78328249 | None:intergenic | 40.0% | |
| ! | CGAGAGCTTCGAAGGTTTTT+AGG | - | chr7_3:78323866-78323885 | None:intergenic | 45.0% |
| AAAAACCTTCGAAGCTCTCG+CGG | + | chr7_3:78323866-78323885 | Msa1126780:five_prime_UTR | 45.0% | |
| TTTGAGGGGTAAATGGGGAT+CGG | - | chr7_3:78323900-78323919 | None:intergenic | 45.0% | |
| ATGCATTTGTCGAGGTGAGT+TGG | + | chr7_3:78324692-78324711 | Msa1126780:intron | 45.0% | |
| TGAAGATGTTCAAGATGCCG+AGG | + | chr7_3:78324809-78324828 | Msa1126780:CDS | 45.0% | |
| !!! | TTTTGATGGGCACCGATTAC+GGG | + | chr7_3:78324860-78324879 | Msa1126780:CDS | 45.0% |
| CTCTGAATATCGTGGTGTGT+AGG | + | chr7_3:78325096-78325115 | Msa1126780:intron | 45.0% | |
| AGGATCACATGCGAAAAGCT+GGG | + | chr7_3:78325327-78325346 | Msa1126780:intron | 45.0% | |
| ! | TTTCATGATGGAAGGGGTAC+GGG | + | chr7_3:78325371-78325390 | Msa1126780:intron | 45.0% |
| GAGCCTCTTCTCCACTTATA+TGG | + | chr7_3:78325670-78325689 | Msa1126780:CDS | 45.0% | |
| !! | GGAAAAAGCATTCCGGAACT+CGG | - | chr7_3:78325829-78325848 | None:intergenic | 45.0% |
| AGGTGAGGGAATATGATTCG+AGG | + | chr7_3:78325956-78325975 | Msa1126780:intron | 45.0% | |
| TGAGGGAATATGATTCGAGG+CGG | + | chr7_3:78325959-78325978 | Msa1126780:CDS | 45.0% | |
| AAATACCTTCTGCTATGGCC+CGG | - | chr7_3:78326075-78326094 | None:intergenic | 45.0% | |
| !! | CGTTGTGTGGTTTTACCCTT+AGG | - | chr7_3:78326197-78326216 | None:intergenic | 45.0% |
| TTTAGCTGGTGAACGTTGTG+TGG | - | chr7_3:78326210-78326229 | None:intergenic | 45.0% | |
| GATCTTGCAGGAGATTTAGC+TGG | - | chr7_3:78326224-78326243 | None:intergenic | 45.0% | |
| GAACGAGAAACTGATCTTGC+AGG | - | chr7_3:78326236-78326255 | None:intergenic | 45.0% | |
| TAAAGAGCGGGATCTAGATC+TGG | - | chr7_3:78326264-78326283 | None:intergenic | 45.0% | |
| TCTAGATCCCGCTCTTTATC+AGG | + | chr7_3:78326266-78326285 | Msa1126780:CDS | 45.0% | |
| CTAGATCCCGCTCTTTATCA+GGG | + | chr7_3:78326267-78326286 | Msa1126780:CDS | 45.0% | |
| TTCTTAGCCTCTTACGTGCA+GGG | + | chr7_3:78326407-78326426 | Msa1126780:intron | 45.0% | |
| !! | AAAAAGTGTCCTCCCATAGG+AGG | + | chr7_3:78326432-78326451 | Msa1126780:intron | 45.0% |
| ATTAATGTGCCTCCTATGGG+AGG | - | chr7_3:78326444-78326463 | None:intergenic | 45.0% | |
| ! | CCCATAGGAGGCACATTAAT+AGG | + | chr7_3:78326444-78326463 | Msa1126780:intron | 45.0% |
| TGAGGTTAAAACCCTGACGA+AGG | + | chr7_3:78326663-78326682 | Msa1126780:intron | 45.0% | |
| ATTGGAAACTTGCGGCATAC+TGG | + | chr7_3:78327060-78327079 | Msa1126780:CDS | 45.0% | |
| ACTTGCGGCATACTGGAAAT+TGG | + | chr7_3:78327067-78327086 | Msa1126780:CDS | 45.0% | |
| !! | ATTAGGGACTTGGTGGGATT+TGG | + | chr7_3:78327092-78327111 | Msa1126780:CDS | 45.0% |
| AATCTCCACCAATGAGCACT+AGG | + | chr7_3:78327311-78327330 | Msa1126780:intron | 45.0% | |
| ATCTCCACCAATGAGCACTA+GGG | + | chr7_3:78327312-78327331 | Msa1126780:intron | 45.0% | |
| TTATCCCTAGTGCTCATTGG+TGG | - | chr7_3:78327319-78327338 | None:intergenic | 45.0% | |
| GCACCATAATCCAGAGAATC+CGG | - | chr7_3:78327394-78327413 | None:intergenic | 45.0% | |
| GATTCTCTGGATTATGGTGC+AGG | + | chr7_3:78327394-78327413 | Msa1126780:intron | 45.0% | |
| TTCTCTGGATTATGGTGCAG+GGG | + | chr7_3:78327396-78327415 | Msa1126780:intron | 45.0% | |
| ACATTAAGACACCAGCAGAC+TGG | - | chr7_3:78327436-78327455 | None:intergenic | 45.0% | |
| TTGATGCCTCTCCAATGTCA+CGG | - | chr7_3:78327608-78327627 | None:intergenic | 45.0% | |
| TTGATGCCTCTCCAATGTCA+CGG | - | chr7_3:78327608-78327627 | None:intergenic | 45.0% | |
| ! | ACTTTTGCAGATCACGGTCA+AGG | + | chr7_3:78327779-78327798 | Msa1126780:intron | 45.0% |
| ! | TTGTGCAAGAAGTACATGGG+AGG | + | chr7_3:78327953-78327972 | Msa1126780:intron | 45.0% |
| ACCTGGACAAACTCTTGCTA+CGG | - | chr7_3:78328128-78328147 | None:intergenic | 45.0% | |
| !!! | ACCCTATTTTGATCGGGACT+TGG | + | chr7_3:78328226-78328245 | Msa1126780:intron | 45.0% |
| GACCAAGTCCCGATCAAAAT+AGG | - | chr7_3:78328231-78328250 | None:intergenic | 45.0% | |
| !! | ATTTTGATCGGGACTTGGTC+TGG | + | chr7_3:78328231-78328250 | Msa1126780:intron | 45.0% |
| TACTTGAGACCTGTGCCTTT+GGG | + | chr7_3:78328397-78328416 | Msa1126780:three_prime_UTR | 45.0% | |
| TTACCAAGTGTGCCCAAACA+AGG | - | chr7_3:78328492-78328511 | None:intergenic | 45.0% | |
| ! | GTTTGGGCACACTTGGTAAT+TGG | + | chr7_3:78328493-78328512 | Msa1126780:three_prime_UTR | 45.0% |
| !!! | AAATAACTTTTTTTTTATAT+AGG | - | chr7_3:78326729-78326748 | None:intergenic | 5.0% |
| TCGAGCAGAACCGTGTATGT+TGG | + | chr7_3:78324156-78324175 | Msa1126780:CDS | 50.0% | |
| TCTCTTTCACGGATATCGCC+AGG | - | chr7_3:78324189-78324208 | None:intergenic | 50.0% | |
| TTGACCTAAAGGTTCCGCCA+AGG | + | chr7_3:78324659-78324678 | Msa1126780:CDS | 50.0% | |
| TCGACAAATGCATAGCCAGG+GGG | - | chr7_3:78324685-78324704 | None:intergenic | 50.0% | |
| CTCGACAAATGCATAGCCAG+GGG | - | chr7_3:78324686-78324705 | None:intergenic | 50.0% | |
| CCTCGACAAATGCATAGCCA+GGG | - | chr7_3:78324687-78324706 | None:intergenic | 50.0% | |
| ACCTCGACAAATGCATAGCC+AGG | - | chr7_3:78324688-78324707 | None:intergenic | 50.0% | |
| TTATAGGTGGAGGCTGCACA+TGG | + | chr7_3:78324995-78325014 | Msa1126780:intron | 50.0% | |
| CGATACAGCAGTCACAGCAA+TGG | + | chr7_3:78325046-78325065 | Msa1126780:CDS | 50.0% | |
| TGCATCCTGGCAGGATCTTA+AGG | + | chr7_3:78325221-78325240 | Msa1126780:CDS | 50.0% | |
| TCTCACCTTAAGATCCTGCC+AGG | - | chr7_3:78325229-78325248 | None:intergenic | 50.0% | |
| CAGGATCACATGCGAAAAGC+TGG | + | chr7_3:78325326-78325345 | Msa1126780:intron | 50.0% | |
| GGATCACATGCGAAAAGCTG+GGG | + | chr7_3:78325328-78325347 | Msa1126780:intron | 50.0% | |
| ! | AGCTTGATGACTCCGAGTTC+CGG | + | chr7_3:78325814-78325833 | Msa1126780:CDS | 50.0% |
| CACCTACATGGGCAAACAGA+GGG | - | chr7_3:78325941-78325960 | None:intergenic | 50.0% | |
| TCACCTACATGGGCAAACAG+AGG | - | chr7_3:78325942-78325961 | None:intergenic | 50.0% | |
| TCTGTTTGCCCATGTAGGTG+AGG | + | chr7_3:78325941-78325960 | Msa1126780:intron | 50.0% | |
| CTGTTTGCCCATGTAGGTGA+GGG | + | chr7_3:78325942-78325961 | Msa1126780:intron | 50.0% | |
| GAGGGAATATGATTCGAGGC+GGG | + | chr7_3:78325960-78325979 | Msa1126780:CDS | 50.0% | |
| ! | ACTCTAGAAGTCCTGGTCGT+GGG | + | chr7_3:78325983-78326002 | Msa1126780:CDS | 50.0% |
| CTTCTTAGCCTCTTACGTGC+AGG | + | chr7_3:78326406-78326425 | Msa1126780:intron | 50.0% | |
| TCTTAGCCTCTTACGTGCAG+GGG | + | chr7_3:78326408-78326427 | Msa1126780:intron | 50.0% | |
| ! | TTTTTCCCCCTGCACGTAAG+AGG | - | chr7_3:78326417-78326436 | None:intergenic | 50.0% |
| !! | GGGAAAAAGTGTCCTCCCAT+AGG | + | chr7_3:78326429-78326448 | Msa1126780:intron | 50.0% |
| AGGCATGTTTCTCCAGGTAC+CGG | - | chr7_3:78326975-78326994 | None:intergenic | 50.0% | |
| ! | ACATGGAGGCATGTTTCTCC+AGG | - | chr7_3:78326981-78327000 | None:intergenic | 50.0% |
| GGAGAAACATGCCTCCATGT+TGG | + | chr7_3:78326981-78327000 | Msa1126780:intron | 50.0% | |
| AATGTCCGTGGGTGCTAGAT+TGG | + | chr7_3:78327218-78327237 | Msa1126780:intron | 50.0% | |
| ATGTCCGTGGGTGCTAGATT+GGG | + | chr7_3:78327219-78327238 | Msa1126780:intron | 50.0% | |
| GTTTCCCAATCTAGCACCCA+CGG | - | chr7_3:78327226-78327245 | None:intergenic | 50.0% | |
| ! | GATAGTGCACCCTATTGGCT+TGG | - | chr7_3:78327372-78327391 | None:intergenic | 50.0% |
| AGCCAATAGGGTGCACTATC+CGG | + | chr7_3:78327372-78327391 | Msa1126780:intron | 50.0% | |
| ATCCGGATAGTGCACCCTAT+TGG | - | chr7_3:78327377-78327396 | None:intergenic | 50.0% | |
| !! | GTGACATTGGAGAGGCATCA+AGG | + | chr7_3:78327607-78327626 | Msa1126780:intron | 50.0% |
| !! | GTGACATTGGAGAGGCATCA+AGG | + | chr7_3:78327607-78327626 | Msa1126780:intron | 50.0% |
| GTCTAGGTCTCCATTACCTC+TGG | + | chr7_3:78327801-78327820 | Msa1126780:CDS | 50.0% | |
| TCTGATGTGGCCCATCTGTA+AGG | + | chr7_3:78327916-78327935 | Msa1126780:intron | 50.0% | |
| !! | TGCTAGCACTGCGCTTTTTG+GGG | - | chr7_3:78328083-78328102 | None:intergenic | 50.0% |
| !! | CTGCTAGCACTGCGCTTTTT+GGG | - | chr7_3:78328084-78328103 | None:intergenic | 50.0% |
| AAGGACTCGAGATAGAGACC+TGG | - | chr7_3:78328145-78328164 | None:intergenic | 50.0% | |
| ! | GAAGTGGATGATGGTCAGTG+TGG | + | chr7_3:78328282-78328301 | Msa1126780:three_prime_UTR | 50.0% |
| GTACTTGAGACCTGTGCCTT+TGG | + | chr7_3:78328396-78328415 | Msa1126780:three_prime_UTR | 50.0% | |
| ! | CTTAAGATGCCCAAAGGCAC+AGG | - | chr7_3:78328409-78328428 | None:intergenic | 50.0% |
| ! | GTTCCTTGTTTGGGCACACT+TGG | + | chr7_3:78328486-78328505 | Msa1126780:three_prime_UTR | 50.0% |
| CCCTGGCTATGCATTTGTCG+AGG | + | chr7_3:78324684-78324703 | Msa1126780:CDS | 55.0% | |
| GATGCCGAGGATGCAATTCG+CGG | + | chr7_3:78324822-78324841 | Msa1126780:CDS | 55.0% | |
| ACGACCGCGAATTGCATCCT+CGG | - | chr7_3:78324829-78324848 | None:intergenic | 55.0% | |
| GATGCAATTCGCGGTCGTGA+TGG | + | chr7_3:78324831-78324850 | Msa1126780:CDS | 55.0% | |
| ACAGCAGTCACAGCAATGGC+CGG | + | chr7_3:78325050-78325069 | Msa1126780:CDS | 55.0% | |
| ! | TCCAGGCGCTCTGAATATCG+TGG | + | chr7_3:78325088-78325107 | Msa1126780:CDS | 55.0% |
| ! | ACCACGATATTCAGAGCGCC+TGG | - | chr7_3:78325092-78325111 | None:intergenic | 55.0% |
| TCCTGCCAGGATGCAGAAGA+GGG | - | chr7_3:78325216-78325235 | None:intergenic | 55.0% | |
| ATCCTGCCAGGATGCAGAAG+AGG | - | chr7_3:78325217-78325236 | None:intergenic | 55.0% | |
| ! | TGGAAGGGGTACGGGACATT+CGG | + | chr7_3:78325379-78325398 | Msa1126780:intron | 55.0% |
| TGCAGGTACTACCGGGATTG+TGG | + | chr7_3:78325613-78325632 | Msa1126780:intron | 55.0% | |
| CTCCCTCTGTTTGCCCATGT+AGG | + | chr7_3:78325936-78325955 | Msa1126780:intron | 55.0% | |
| ! | GACTCTAGAAGTCCTGGTCG+TGG | + | chr7_3:78325982-78326001 | Msa1126780:CDS | 55.0% |
| CGTGGGCCTTCTCATTCTAG+AGG | + | chr7_3:78326000-78326019 | Msa1126780:CDS | 55.0% | |
| CTTAGCCTCTTACGTGCAGG+GGG | + | chr7_3:78326409-78326428 | Msa1126780:intron | 55.0% | |
| TGCATTGTTCGTCCGGTACC+TGG | + | chr7_3:78326960-78326979 | Msa1126780:intron | 55.0% | |
| GGTGCACTATCCGGATTCTC+TGG | + | chr7_3:78327381-78327400 | Msa1126780:intron | 55.0% | |
| ACGGTTCGCAAACCCAAGAG+AGG | - | chr7_3:78327589-78327608 | None:intergenic | 55.0% | |
| GGGTTTGCGAACCGTGACAT+TGG | + | chr7_3:78327594-78327613 | Msa1126780:intron | 55.0% | |
| TGCGAACCGTGACATTGGAG+AGG | + | chr7_3:78327599-78327618 | Msa1126780:intron | 55.0% | |
| !! | TGGAGAGGCATCAAGGCTGT+TGG | + | chr7_3:78327614-78327633 | Msa1126780:intron | 55.0% |
| ACGGTTCGCAAACCCAAGAG+AGG | - | chr7_3:78327589-78327608 | None:intergenic | 55.0% | |
| GGGTTTGCGAACCGTGACAT+TGG | + | chr7_3:78327594-78327613 | Msa1126780:intron | 55.0% | |
| TGCGAACCGTGACATTGGAG+AGG | + | chr7_3:78327599-78327618 | Msa1126780:intron | 55.0% | |
| !! | TGGAGAGGCATCAAGGCTGT+TGG | + | chr7_3:78327614-78327633 | Msa1126780:intron | 55.0% |
| GCAGATCACGGTCAAGGTCT+AGG | + | chr7_3:78327785-78327804 | Msa1126780:intron | 55.0% | |
| ! | CCTGCTAGCACTGCGCTTTT+TGG | - | chr7_3:78328085-78328104 | None:intergenic | 55.0% |
| ! | CCAAAAAGCGCAGTGCTAGC+AGG | + | chr7_3:78328082-78328101 | Msa1126780:CDS | 55.0% |
| GTGCTAGCAGGAGTCCAAGT+AGG | + | chr7_3:78328094-78328113 | Msa1126780:CDS | 55.0% | |
| GCCGTAGCAAGAGTTTGTCC+AGG | + | chr7_3:78328124-78328143 | Msa1126780:CDS | 55.0% | |
| TGTTGCCGCGAGAGCTTCGA+AGG | - | chr7_3:78323874-78323893 | None:intergenic | 60.0% | |
| GAGGGGTAAATGGGGATCGG+TGG | - | chr7_3:78323897-78323916 | None:intergenic | 60.0% | |
| AATGCATAGCCAGGGGGCCT+TGG | - | chr7_3:78324679-78324698 | None:intergenic | 60.0% | |
| !! | GATGGGCACCGATTACGGGT+TGG | + | chr7_3:78324864-78324883 | Msa1126780:intron | 60.0% |
| TAGGTGGAGGCTGCACATGG+CGG | + | chr7_3:78324998-78325017 | Msa1126780:intron | 60.0% | |
| CAGCAGTCACAGCAATGGCC+GGG | + | chr7_3:78325051-78325070 | Msa1126780:CDS | 60.0% | |
| AGCAGTCACAGCAATGGCCG+GGG | + | chr7_3:78325052-78325071 | Msa1126780:CDS | 60.0% | |
| GACTGCCCTCTTCTGCATCC+TGG | + | chr7_3:78325208-78325227 | Msa1126780:CDS | 60.0% | |
| ! | AGGCGGGACTCTAGAAGTCC+TGG | + | chr7_3:78325976-78325995 | Msa1126780:CDS | 60.0% |
| GAATGAGAAGGCCCACGACC+AGG | - | chr7_3:78325997-78326016 | None:intergenic | 60.0% | |
| TATGGCCCGGACTGTCGCTA+CGG | - | chr7_3:78326062-78326081 | None:intergenic | 60.0% | |
| ACAGTCCGGGCCATAGCAGA+AGG | + | chr7_3:78326067-78326086 | Msa1126780:CDS | 60.0% | |
| GCAGGAGTCCAAGTAGGAGC+AGG | + | chr7_3:78328100-78328119 | Msa1126780:CDS | 60.0% | |
| CTACGGCTCCTGCTCCTACT+TGG | - | chr7_3:78328111-78328130 | None:intergenic | 60.0% | |
| ! | TGATCGGGACTTGGTCTGGC+AGG | + | chr7_3:78328235-78328254 | Msa1126780:intron | 60.0% |
| GGGGCCTTGGCGGAACCTTT+AGG | - | chr7_3:78324666-78324685 | None:intergenic | 65.0% | |
| AGTCACAGCAATGGCCGGGG+TGG | + | chr7_3:78325055-78325074 | Msa1126780:CDS | 65.0% | |
| GCCCTCTTCTGCATCCTGGC+AGG | + | chr7_3:78325212-78325231 | Msa1126780:CDS | 65.0% | |
| TGCGGCTGCGACTACGACTG+CGG | - | chr7_3:78326038-78326057 | None:intergenic | 65.0% | |
| AAGGTTCCGCCAAGGCCCCC+TGG | + | chr7_3:78324667-78324686 | Msa1126780:CDS | 70.0% | |
| GCATAGCCAGGGGGCCTTGG+CGG | - | chr7_3:78324676-78324695 | None:intergenic | 70.0% | |
| GAGGCTGCACATGGCGGTCG+TGG | + | chr7_3:78325004-78325023 | Msa1126780:CDS | 70.0% | |
| AGCAATGGCCGGGGTGGACG+CGG | + | chr7_3:78325061-78325080 | Msa1126780:CDS | 70.0% | |
| TGGATACCCCGCGTCCACCC+CGG | - | chr7_3:78325072-78325091 | None:intergenic | 70.0% | |
| CCGGACTGTCGCTACGGCTG+CGG | - | chr7_3:78326056-78326075 | None:intergenic | 70.0% | |
| CCGCAGCCGTAGCGACAGTC+CGG | + | chr7_3:78326053-78326072 | Msa1126780:CDS | 70.0% | |
| CGCAGCCGTAGCGACAGTCC+GGG | + | chr7_3:78326054-78326073 | Msa1126780:CDS | 70.0% | |
| GCAATGGCCGGGGTGGACGC+GGG | + | chr7_3:78325062-78325081 | Msa1126780:CDS | 75.0% | |
| CAATGGCCGGGGTGGACGCG+GGG | + | chr7_3:78325063-78325082 | Msa1126780:CDS | 75.0% | |
| ! | GGGGTGGACGCGGGGTATCC+AGG | + | chr7_3:78325071-78325090 | Msa1126780:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 78323842 | 78328569 | 78323842 | ID=Msa1126780;Name=Msa1126780 |
| chr7_3 | mRNA | 78323842 | 78328569 | 78323842 | ID=Msa1126780-mRNA-1;Parent=Msa1126780;Name=Msa1126780-mRNA-1;_AED=0.27;_eAED=0.27;_QI=93|0.85|0.86|1|0.78|0.8|15|302|343 |
| chr7_3 | exon | 78323842 | 78323925 | 78323842 | ID=Msa1126780-mRNA-1:exon:21823;Parent=Msa1126780-mRNA-1 |
| chr7_3 | exon | 78324135 | 78324230 | 78324135 | ID=Msa1126780-mRNA-1:exon:21824;Parent=Msa1126780-mRNA-1 |
| chr7_3 | exon | 78324640 | 78324705 | 78324640 | ID=Msa1126780-mRNA-1:exon:21825;Parent=Msa1126780-mRNA-1 |
| chr7_3 | exon | 78324807 | 78324881 | 78324807 | ID=Msa1126780-mRNA-1:exon:21826;Parent=Msa1126780-mRNA-1 |
| chr7_3 | exon | 78325001 | 78325109 | 78325001 | ID=Msa1126780-mRNA-1:exon:21827;Parent=Msa1126780-mRNA-1 |
| chr7_3 | exon | 78325196 | 78325242 | 78325196 | ID=Msa1126780-mRNA-1:exon:21828;Parent=Msa1126780-mRNA-1 |
| chr7_3 | exon | 78325329 | 78325386 | 78325329 | ID=Msa1126780-mRNA-1:exon:21829;Parent=Msa1126780-mRNA-1 |
| chr7_3 | exon | 78325618 | 78325691 | 78325618 | ID=Msa1126780-mRNA-1:exon:21830;Parent=Msa1126780-mRNA-1 |
| chr7_3 | exon | 78325807 | 78325863 | 78325807 | ID=Msa1126780-mRNA-1:exon:21831;Parent=Msa1126780-mRNA-1 |
| chr7_3 | exon | 78325958 | 78326088 | 78325958 | ID=Msa1126780-mRNA-1:exon:21832;Parent=Msa1126780-mRNA-1 |
| chr7_3 | exon | 78326170 | 78326288 | 78326170 | ID=Msa1126780-mRNA-1:exon:21833;Parent=Msa1126780-mRNA-1 |
| chr7_3 | exon | 78327060 | 78327146 | 78327060 | ID=Msa1126780-mRNA-1:exon:21834;Parent=Msa1126780-mRNA-1 |
| chr7_3 | exon | 78327789 | 78327822 | 78327789 | ID=Msa1126780-mRNA-1:exon:21835;Parent=Msa1126780-mRNA-1 |
| chr7_3 | exon | 78328069 | 78328145 | 78328069 | ID=Msa1126780-mRNA-1:exon:21836;Parent=Msa1126780-mRNA-1 |
| chr7_3 | exon | 78328257 | 78328569 | 78328257 | ID=Msa1126780-mRNA-1:exon:21837;Parent=Msa1126780-mRNA-1 |
| chr7_3 | five_prime_UTR | 78323842 | 78323925 | 78323842 | ID=Msa1126780-mRNA-1:five_prime_utr;Parent=Msa1126780-mRNA-1 |
| chr7_3 | five_prime_UTR | 78324135 | 78324143 | 78324135 | ID=Msa1126780-mRNA-1:five_prime_utr;Parent=Msa1126780-mRNA-1 |
| chr7_3 | CDS | 78324144 | 78324230 | 78324144 | ID=Msa1126780-mRNA-1:cds;Parent=Msa1126780-mRNA-1 |
| chr7_3 | CDS | 78324640 | 78324705 | 78324640 | ID=Msa1126780-mRNA-1:cds;Parent=Msa1126780-mRNA-1 |
| chr7_3 | CDS | 78324807 | 78324881 | 78324807 | ID=Msa1126780-mRNA-1:cds;Parent=Msa1126780-mRNA-1 |
| chr7_3 | CDS | 78325001 | 78325109 | 78325001 | ID=Msa1126780-mRNA-1:cds;Parent=Msa1126780-mRNA-1 |
| chr7_3 | CDS | 78325196 | 78325242 | 78325196 | ID=Msa1126780-mRNA-1:cds;Parent=Msa1126780-mRNA-1 |
| chr7_3 | CDS | 78325329 | 78325386 | 78325329 | ID=Msa1126780-mRNA-1:cds;Parent=Msa1126780-mRNA-1 |
| chr7_3 | CDS | 78325618 | 78325691 | 78325618 | ID=Msa1126780-mRNA-1:cds;Parent=Msa1126780-mRNA-1 |
| chr7_3 | CDS | 78325807 | 78325863 | 78325807 | ID=Msa1126780-mRNA-1:cds;Parent=Msa1126780-mRNA-1 |
| chr7_3 | CDS | 78325958 | 78326088 | 78325958 | ID=Msa1126780-mRNA-1:cds;Parent=Msa1126780-mRNA-1 |
| chr7_3 | CDS | 78326170 | 78326288 | 78326170 | ID=Msa1126780-mRNA-1:cds;Parent=Msa1126780-mRNA-1 |
| chr7_3 | CDS | 78327060 | 78327146 | 78327060 | ID=Msa1126780-mRNA-1:cds;Parent=Msa1126780-mRNA-1 |
| chr7_3 | CDS | 78327789 | 78327822 | 78327789 | ID=Msa1126780-mRNA-1:cds;Parent=Msa1126780-mRNA-1 |
| chr7_3 | CDS | 78328069 | 78328145 | 78328069 | ID=Msa1126780-mRNA-1:cds;Parent=Msa1126780-mRNA-1 |
| chr7_3 | CDS | 78328257 | 78328267 | 78328257 | ID=Msa1126780-mRNA-1:cds;Parent=Msa1126780-mRNA-1 |
| chr7_3 | three_prime_UTR | 78328268 | 78328569 | 78328268 | ID=Msa1126780-mRNA-1:three_prime_utr;Parent=Msa1126780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
