AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0483270

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0483270 MtrunA17_Chr6g0450991 90.347 259 4 1 1 259 1 238 8.98e-168 465
Msa0483270 MtrunA17_Chr5g0415941 58.451 142 44 4 39 168 51 189 1.33e-42 147
Msa0483270 MtrunA17_Chr4g0060031 38.095 294 121 11 1 249 1 278 9.29e-42 145
Msa0483270 MtrunA17_Chr8g0362751 72.043 93 26 0 63 155 85 177 4.68e-39 137
Msa0483270 MtrunA17_Chr8g0362151 51.748 143 57 3 22 164 44 174 1.56e-38 135
Msa0483270 MtrunA17_Chr6g0453021 49.324 148 74 1 15 162 45 191 1.61e-37 133
Msa0483270 MtrunA17_Chr8g0381741 48.077 156 63 2 32 182 32 174 2.67e-37 133
Msa0483270 MtrunA17_Chr5g0416391 56.154 130 49 1 43 164 45 174 6.28e-37 132
Msa0483270 MtrunA17_Chr3g0119291 57.812 128 50 2 52 177 42 167 5.90e-36 128
Msa0483270 MtrunA17_Chr3g0123691 65.306 98 34 0 66 163 59 156 6.37e-36 129
Msa0483270 MtrunA17_Chr7g0217111 56.250 112 45 2 52 162 67 175 2.80e-31 116
Msa0483270 MtrunA17_Chr7g0265521 57.143 98 35 1 66 163 62 152 2.71e-29 110
Msa0483270 MtrunA17_Chr1g0179581 58.889 90 30 1 66 155 27 109 6.68e-29 105
Msa0483270 MtrunA17_Chr8g0346251 58.537 82 34 0 71 152 45 126 9.35e-28 107
Msa0483270 MtrunA17_Chr3g0127511 57.471 87 37 0 69 155 40 126 1.29e-27 106
Msa0483270 MtrunA17_Chr5g0403701 60.274 73 29 0 67 139 53 125 1.57e-22 92.0
Msa0483270 MtrunA17_Chr5g0403691 60.274 73 29 0 67 139 53 125 6.03e-22 90.9
Msa0483270 MtrunA17_Chr1g0151971 49.000 100 51 0 64 163 127 226 1.63e-21 91.3
Msa0483270 MtrunA17_Chr4g0055851 46.364 110 50 2 52 161 107 207 2.03e-20 88.2
Msa0483270 MtrunA17_Chr4g0044091 48.352 91 47 0 64 154 62 152 2.51e-19 83.2
Msa0483270 MtrunA17_Chr4g0054421 50.000 88 44 0 67 154 127 214 1.25e-18 82.8
Msa0483270 MtrunA17_Chr5g0399491 47.222 108 48 2 54 161 125 223 1.61e-18 83.2
Msa0483270 MtrunA17_Chr7g0258831 47.525 101 46 1 61 161 154 247 1.65e-18 83.2
Msa0483270 MtrunA17_Chr8g0335131 48.864 88 45 0 67 154 146 233 1.88e-18 83.2
Msa0483270 MtrunA17_Chr5g0400781 50.000 88 44 0 67 154 123 210 3.55e-18 81.6
Msa0483270 MtrunA17_Chr4g0071411 45.361 97 48 1 70 166 91 182 6.51e-18 80.1
Msa0483270 MtrunA17_Chr3g0135331 46.739 92 49 0 67 158 145 236 1.12e-17 80.9
Msa0483270 MtrunA17_Chr1g0175651 46.535 101 47 1 61 161 148 241 1.88e-17 80.1
Msa0483270 MtrunA17_Chr2g0308611 47.368 95 43 1 67 161 200 287 3.12e-17 80.1
Msa0483270 MtrunA17_Chr2g0299031 43.182 88 50 0 67 154 82 169 2.63e-13 67.4
Msa0483270 MtrunA17_Chr8g0350321 38.318 107 50 3 56 160 105 197 3.94e-11 63.2
Msa0483270 MtrunA17_Chr6g0472471 38.043 92 43 2 69 160 74 151 7.69e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0483270 AT3G01470.1 57.198 257 74 6 1 251 1 227 2.15e-83 251
Msa0483270 AT2G22430.1 56.391 133 44 1 66 184 61 193 6.25e-39 138
Msa0483270 AT4G40060.1 62.727 110 41 0 53 162 45 154 1.30e-38 137
Msa0483270 AT5G15150.1 71.111 90 26 0 66 155 114 203 6.12e-36 130
Msa0483270 AT5G65310.2 62.000 100 38 0 64 163 51 150 1.30e-35 129
Msa0483270 AT5G65310.1 62.000 100 38 0 64 163 69 168 1.95e-35 129
Msa0483270 AT1G69780.1 61.765 102 37 1 56 155 72 173 2.41e-35 128
Msa0483270 AT3G01220.1 63.918 97 35 0 66 162 86 182 1.11e-33 124
Msa0483270 AT1G26960.1 49.286 140 62 3 29 165 36 169 5.24e-32 118
Msa0483270 AT1G27045.5 57.576 99 42 0 67 165 25 123 6.53e-31 114
Msa0483270 AT1G27045.3 57.576 99 42 0 67 165 25 123 6.53e-31 114
Msa0483270 AT1G27045.2 57.576 99 42 0 67 165 17 115 8.16e-31 113
Msa0483270 AT1G27045.1 57.576 99 42 0 67 165 68 166 2.09e-30 113
Msa0483270 AT1G27045.4 50.000 138 63 2 67 200 68 203 3.23e-30 114
Msa0483270 AT2G46680.2 56.818 88 38 0 68 155 33 120 2.35e-29 111
Msa0483270 AT2G46680.1 56.818 88 38 0 68 155 33 120 2.48e-29 111
Msa0483270 AT3G61890.1 54.651 86 39 0 70 155 33 118 2.06e-27 106
Msa0483270 AT5G03790.2 48.333 120 51 2 67 186 77 185 7.81e-27 103
Msa0483270 AT4G36740.2 47.059 119 49 2 67 185 56 160 3.03e-26 102
Msa0483270 AT4G36740.1 47.059 119 49 2 67 185 55 159 3.58e-26 102
Msa0483270 AT5G03790.1 55.682 88 39 0 67 154 77 164 2.56e-25 100
Msa0483270 AT2G36610.1 46.218 119 45 3 66 172 70 181 2.90e-24 96.3
Msa0483270 AT2G18550.1 61.644 73 28 0 67 139 61 133 3.86e-24 97.1
Msa0483270 AT5G66700.1 53.061 98 42 1 67 160 71 168 6.97e-24 96.7
Msa0483270 AT5G53980.1 42.478 113 65 0 58 170 2 114 1.38e-20 85.9
Msa0483270 AT4G17460.1 46.226 106 50 1 56 161 124 222 2.35e-19 85.5
Msa0483270 AT2G22800.1 45.000 100 52 1 58 154 101 200 9.52e-19 83.6
Msa0483270 AT2G01430.1 45.098 102 53 1 56 154 125 226 4.00e-18 82.0
Msa0483270 AT5G06710.1 47.525 101 46 1 61 161 184 277 4.33e-18 82.8
Msa0483270 AT5G47370.1 43.590 117 54 2 50 161 108 217 6.60e-18 81.6
Msa0483270 AT4G37790.1 44.444 99 55 0 56 154 115 213 3.26e-17 79.7
Msa0483270 AT2G44910.1 47.368 95 43 1 67 161 163 250 7.10e-17 79.3
Msa0483270 AT3G60390.1 46.939 98 45 1 64 161 159 249 7.25e-17 79.0
Msa0483270 AT4G16780.1 44.211 95 46 1 67 161 129 216 3.17e-16 77.0
Msa0483270 AT2G01430.2 52.239 67 29 1 56 119 125 191 8.76e-15 71.6
Msa0483270 AT1G70920.2 46.591 88 47 0 67 154 39 126 3.53e-14 69.3
Msa0483270 AT1G70920.1 46.591 88 47 0 67 154 69 156 3.78e-14 69.7
Msa0483270 AT5G06710.4 56.897 58 25 0 61 118 184 241 3.23e-13 68.2
Msa0483270 AT5G46880.3 33.051 118 59 4 49 163 96 196 2.03e-11 64.3
Msa0483270 AT5G46880.1 33.051 118 59 4 49 163 96 196 2.03e-11 64.3
Msa0483270 AT5G46880.2 33.051 118 59 4 49 163 96 196 2.03e-11 64.3
Msa0483270 AT1G73360.1 37.113 97 45 2 66 160 32 114 3.16e-11 63.5

Find 120 sgRNAs with CRISPR-Local

Find 250 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTTGAAGCTTCTCATTTA+AGG 0.097700 3_3:-91317464 None:intergenic
ATTAGATACATCATGTAATT+TGG 0.108235 3_3:+91317874 Msa0483270:three_prime_UTR
ACTTCAAAACTTCACGTTAA+AGG 0.158934 3_3:-91315035 None:intergenic
AACATGAACATGCTGTTTCT+TGG 0.235472 3_3:+91315120 Msa0483270:CDS
ATCCTAGTTTCTTGGCCAAC+TGG 0.259750 3_3:-91316626 None:intergenic
TAGCTCCCAATCACCTTCTT+TGG 0.273141 3_3:-91317157 None:intergenic
ATCATGTAATTTGGGTGCTT+TGG 0.283043 3_3:+91317883 Msa0483270:three_prime_UTR
CAGTGCCTCTCCTCTCTTCA+TGG 0.287113 3_3:-91317797 None:intergenic
GACGCCATTGCCCAAATTAC+TGG 0.309489 3_3:-91317956 None:intergenic
TCATGTAATTTGGGTGCTTT+GGG 0.328486 3_3:+91317884 Msa0483270:three_prime_UTR
TTTCTTGGAAATGCTGATCT+TGG 0.335848 3_3:+91315135 Msa0483270:CDS
GTGGATGACCACATGAGTTC+TGG 0.344344 3_3:+91317574 Msa0483270:CDS
TGGAAATTTGCTTCTTATGA+TGG 0.352445 3_3:-91317130 None:intergenic
AGGTTGCAATCCTAGTTTCT+TGG 0.355925 3_3:-91316634 None:intergenic
TTAGATACATCATGTAATTT+GGG 0.364008 3_3:+91317875 Msa0483270:three_prime_UTR
AAACTCCAGCAAGGTTGCTT+TGG 0.365281 3_3:+91314840 Msa0483270:five_prime_UTR
CACTTACCAAAGAAGGTGAT+TGG 0.366662 3_3:+91317151 Msa0483270:CDS
AACATATGATTCCATTACTA+AGG 0.392206 3_3:+91316761 Msa0483270:CDS
GTTGTCCAAAGCAACCTTGC+TGG 0.395219 3_3:-91314845 None:intergenic
AATATTTCTATGATGGTTTG+TGG 0.412813 3_3:-91314903 None:intergenic
CCGATTCCGGTGGTCTTTGA+AGG 0.412824 3_3:-91314769 None:intergenic
TTATAGAAATATTTCTATGA+TGG 0.415029 3_3:-91314910 None:intergenic
AGAGAGAGGGAGCCTTCAAC+CGG 0.416452 3_3:-91314651 None:intergenic
GGAATCATATGTTGAAAGTA+GGG 0.419448 3_3:-91316751 None:intergenic
TTCAGAACCGTAGGGCTAGA+TGG 0.424104 3_3:+91316676 Msa0483270:CDS
CCTTCAAAGACCACCGGAAT+CGG 0.430687 3_3:+91314769 Msa0483270:five_prime_UTR
CAATCACCTTCTTTGGTAAG+TGG 0.430947 3_3:-91317150 None:intergenic
GTGAGGCGGCGCTTCTTCTC+CGG 0.438471 3_3:-91315856 None:intergenic
GAAGATGATGGGAGTGATGA+TGG 0.439088 3_3:+91317728 Msa0483270:three_prime_UTR
TGGAATCATATGTTGAAAGT+AGG 0.440148 3_3:-91316752 None:intergenic
TGTTGAAAGTAGGGAATCAT+AGG 0.441815 3_3:-91316742 None:intergenic
TTTCTCATTCTCCTTAGTAA+TGG 0.443693 3_3:-91316772 None:intergenic
CAAAGCTCTTCTCCAACATA+TGG 0.449623 3_3:-91316569 None:intergenic
AACCTAGGCAGGTGGCTGTA+TGG 0.452751 3_3:+91316652 Msa0483270:CDS
GGAAGGAGAACGCCGGTGGC+CGG 0.458683 3_3:-91314715 None:intergenic
AGAGAATCAGAGGAAGATGA+TGG 0.464763 3_3:+91317716 Msa0483270:three_prime_UTR
TCCTAGTTTCTTGGCCAACT+GGG 0.472188 3_3:-91316625 None:intergenic
AGAACGCCGGTGGCCGGAGA+TGG 0.474737 3_3:-91314709 None:intergenic
TTTGGGTGCTTTGGGCGCCT+AGG 0.476188 3_3:+91317892 Msa0483270:three_prime_UTR
TCCTCATCATACAGTTCATC+CGG 0.477560 3_3:-91315814 None:intergenic
AAATTTCCACTTACCAAAGA+AGG 0.478182 3_3:+91317144 Msa0483270:CDS
TGAGCTATGTCCACTGGAAG+TGG 0.478436 3_3:-91317535 None:intergenic
ACTAGGATTGCAACCTAGGC+AGG 0.478866 3_3:+91316641 Msa0483270:CDS
CACAGAAAACACCCGGTTGA+AGG 0.485081 3_3:+91314639 Msa0483270:five_prime_UTR
AGAAACTAGGATTGCAACCT+AGG 0.487565 3_3:+91316637 Msa0483270:CDS
CGATTCCGGTGGTCTTTGAA+GGG 0.488176 3_3:-91314768 None:intergenic
AGATCCCATCATGCACTGTA+AGG 0.493831 3_3:-91314801 None:intergenic
ACTTACCAAAGAAGGTGATT+GGG 0.495751 3_3:+91317152 Msa0483270:CDS
TTTGATTCTCCTGCTTGTCG+TGG 0.496337 3_3:+91315093 Msa0483270:CDS
CACCGGCGTTCTCCTTCCTC+CGG 0.500855 3_3:+91314720 Msa0483270:five_prime_UTR
AAGAGAGGAGAGGCACTGAT+TGG 0.503364 3_3:+91317802 Msa0483270:three_prime_UTR
CTGTATGGTTTCAGAACCGT+AGG 0.504508 3_3:+91316667 Msa0483270:CDS
CACATGAGTTCTGGAAGCGT+TGG 0.505249 3_3:+91317583 Msa0483270:CDS
TTTACCTTACAGTGCATGAT+GGG 0.507423 3_3:+91314797 Msa0483270:five_prime_UTR
AAAAGATCATTAACTTATGA+CGG 0.515704 3_3:-91314877 None:intergenic
GAGGAGAGGCACTGATTGGT+GGG 0.526073 3_3:+91317806 Msa0483270:three_prime_UTR
ACCCAGTTGGCCAAGAAACT+AGG 0.526542 3_3:+91316624 Msa0483270:CDS
GAGAATCAGAGGAAGATGAT+GGG 0.526705 3_3:+91317717 Msa0483270:three_prime_UTR
AACAATGACACCAACGACAC+GGG 0.527406 3_3:-91317632 None:intergenic
CATCCAGCATAGTTGTCAGC+TGG 0.530440 3_3:-91317676 None:intergenic
TTGTCTTCCATCTAGCCCTA+CGG 0.531725 3_3:-91316683 None:intergenic
ATGTTATTCCCACGACAAGC+AGG 0.535589 3_3:-91315102 None:intergenic
TTTCCAGCTGACAACTATGC+TGG 0.536407 3_3:+91317673 Msa0483270:CDS
TTGATTCTCCTGCTTGTCGT+GGG 0.539519 3_3:+91315094 Msa0483270:CDS
GCGCCGCCTCACTTCCGAGC+AGG 0.539627 3_3:+91315867 Msa0483270:CDS
AAGATGATGGGAGTGATGAT+GGG 0.542417 3_3:+91317729 Msa0483270:three_prime_UTR
GGAAGGTCAATGATGAGCAT+GGG 0.542750 3_3:+91315757 Msa0483270:intron
AAAATCTGAGCTATGTCCAC+TGG 0.550742 3_3:-91317541 None:intergenic
AGAGGAGAGGCACTGATTGG+TGG 0.551443 3_3:+91317805 Msa0483270:three_prime_UTR
AGGCAAGCAACCAACCTGCT+CGG 0.554902 3_3:-91315881 None:intergenic
AAAACTCCATCTCCGGCCAC+CGG 0.557370 3_3:+91314703 Msa0483270:five_prime_UTR
CTGAAGGGTTTACCGGAGGA+AGG 0.563770 3_3:-91314732 None:intergenic
AACCTTGCTGGAGTTTCTAA+CGG 0.564569 3_3:-91314833 None:intergenic
AGGAAGGTCAATGATGAGCA+TGG 0.567797 3_3:+91315756 Msa0483270:intron
GAGACCTTTCTTTAGCTCAC+CGG 0.569954 3_3:+91315795 Msa0483270:CDS
CAACAATGACACCAACGACA+CGG 0.575613 3_3:-91317633 None:intergenic
AACCATACAGCCACCTGCCT+AGG 0.579439 3_3:-91316654 None:intergenic
AAGTCCAGTAATTTGGGCAA+TGG 0.579629 3_3:+91317952 Msa0483270:three_prime_UTR
TATGTTGGAGAAGAGCTTTG+AGG 0.579800 3_3:+91316572 Msa0483270:CDS
CTTTAGTCACAGAAAACACC+CGG 0.581401 3_3:+91314632 None:intergenic
GGTGTGTGCGTGCGAGAGAG+AGG 0.587148 3_3:-91314665 None:intergenic
TCACCGGAAAACTCCATCTC+CGG 0.587179 3_3:+91314696 Msa0483270:five_prime_UTR
CTAGATTGAGAGAGAATCAG+AGG 0.587602 3_3:+91317706 Msa0483270:exon
GAAATGAAAGGTAAAATCAG+AGG 0.588163 3_3:-91318064 None:intergenic
TCATCCGGTGAGCTAAAGAA+AGG 0.588529 3_3:-91315799 None:intergenic
TGATGAATAGGTCCATATGT+TGG 0.590134 3_3:+91316557 Msa0483270:intron
AACCAACCTGCTCGGAAGTG+AGG 0.594175 3_3:-91315873 None:intergenic
AGGTGATTGGGAGCTATCAA+AGG 0.596262 3_3:+91317164 Msa0483270:CDS
GTGTGTGCGTGCGAGAGAGA+GGG 0.607865 3_3:-91314664 None:intergenic
AAATGAAAGGTAAAATCAGA+GGG 0.611184 3_3:-91318063 None:intergenic
GAAAGCTGATCCACTTCCAG+TGG 0.611490 3_3:+91317525 Msa0483270:CDS
TCAAAGACCACCGGAATCGG+TGG 0.614461 3_3:+91314772 Msa0483270:five_prime_UTR
AGAACAAACTTGAGCCAGAG+AGG 0.615094 3_3:+91316598 Msa0483270:CDS
CAACCTGCTCGGAAGTGAGG+CGG 0.622855 3_3:-91315870 None:intergenic
GAAGGTCAATGATGAGCATG+GGG 0.623217 3_3:+91315758 Msa0483270:CDS
ACAATGACACCAACGACACG+GGG 0.624556 3_3:-91317631 None:intergenic
TGAATCCCTTCAAAGACCAC+CGG 0.626499 3_3:+91314763 Msa0483270:five_prime_UTR
GCCAGAGAGGAAAACCCAGT+TGG 0.627216 3_3:+91316611 Msa0483270:CDS
GAATGAGAAACTCAAATCTG+AGG 0.629755 3_3:+91316785 Msa0483270:CDS
GAGAGAGGGAGCCTTCAACC+GGG 0.633151 3_3:-91314650 None:intergenic
AAGCGTTGGAAGTGCAGTGG+TGG 0.633588 3_3:+91317597 Msa0483270:CDS
CAACGCTTCCAGAACTCATG+TGG 0.634732 3_3:-91317582 None:intergenic
ACCGGATGAACTGTATGATG+AGG 0.641946 3_3:+91315813 Msa0483270:CDS
TGACAACTATGCTGGATGTG+TGG 0.645273 3_3:+91317681 Msa0483270:CDS
CGGAGGAAGGAGAACGCCGG+TGG 0.651258 3_3:-91314719 None:intergenic
GTACTACGAAGAACAGTCAC+CGG 0.657008 3_3:+91315837 Msa0483270:CDS
TGAGCAACAACCATGAAGAG+AGG 0.664620 3_3:+91317787 Msa0483270:three_prime_UTR
AGGATTGCAACCTAGGCAGG+TGG 0.665303 3_3:+91316644 Msa0483270:CDS
TGGAAGCGTTGGAAGTGCAG+TGG 0.670661 3_3:+91317594 Msa0483270:CDS
ATGATGGGAGTGATGATGGG+AGG 0.679048 3_3:+91317732 Msa0483270:three_prime_UTR
GTCCGTTAGAAACTCCAGCA+AGG 0.680090 3_3:+91314831 Msa0483270:five_prime_UTR
AACAACCATGAAGAGAGGAG+AGG 0.684340 3_3:+91317792 Msa0483270:three_prime_UTR
TTAGAGACATTTCAACACCT+AGG 0.688285 3_3:-91317909 None:intergenic
TGTATGGTTTCAGAACCGTA+GGG 0.689319 3_3:+91316668 Msa0483270:CDS
TGAACTGAAGGGTTTACCGG+AGG 0.690682 3_3:-91314736 None:intergenic
TGATTGGGAGCTATCAAAGG+AGG 0.691655 3_3:+91317167 Msa0483270:CDS
AGGAGAGGCACTGATTGGTG+GGG 0.698606 3_3:+91317807 Msa0483270:three_prime_UTR
TACCGGAGGAAGGAGAACGC+CGG 0.715230 3_3:-91314722 None:intergenic
CAATGACACCAACGACACGG+GGG 0.756439 3_3:-91317630 None:intergenic
AAGGTCAATGATGAGCATGG+GGG 0.757009 3_3:+91315759 Msa0483270:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAAAAAATATCAAGTT+TGG + chr3_3:91314929-91314948 Msa0483270:five_prime_UTR 10.0%
!!! ATTAAAATCAAATGTTTTAA+TGG + chr3_3:91316870-91316889 Msa0483270:intron 10.0%
!!! TTATAGAAATATTTCTATGA+TGG - chr3_3:91314913-91314932 None:intergenic 15.0%
!! TACAAACACTAATAAATAAA+TGG - chr3_3:91316124-91316143 None:intergenic 15.0%
!!! ACTAATGAGTTTTTTAAAAA+GGG + chr3_3:91317352-91317371 Msa0483270:intron 15.0%
!!! ATTTTTTTTAAGTACAACAA+AGG - chr3_3:91317981-91318000 None:intergenic 15.0%
!! AAAAGATCATTAACTTATGA+CGG - chr3_3:91314880-91314899 None:intergenic 20.0%
!!! CTTAATCTATTGAGTTTTTA+TGG + chr3_3:91315174-91315193 Msa0483270:intron 20.0%
!! TACAATCCAAAAAAACAAAA+TGG - chr3_3:91315202-91315221 None:intergenic 20.0%
!!! TTTTTTGGATTGTAAATTGT+TGG + chr3_3:91315208-91315227 Msa0483270:intron 20.0%
!!! TGATTTGATTTGATTTGATT+TGG + chr3_3:91315434-91315453 Msa0483270:intron 20.0%
!!! GATTTGATTTGATTTGATTT+GGG + chr3_3:91315435-91315454 Msa0483270:intron 20.0%
!!! TTGATTTGAGTTTTTGTTAA+AGG + chr3_3:91315521-91315540 Msa0483270:intron 20.0%
!!! TGTTTATTAGTTTTAGTGAT+TGG + chr3_3:91316292-91316311 Msa0483270:intron 20.0%
!! ATATATGCAAATTGAGAATT+TGG + chr3_3:91316984-91317003 Msa0483270:intron 20.0%
!! ATTAGTGTTATGCATTAAAA+AGG + chr3_3:91317021-91317040 Msa0483270:intron 20.0%
!! AATATAGTGTAGAATCTTAT+GGG - chr3_3:91317198-91317217 None:intergenic 20.0%
!! TAATATAGTGTAGAATCTTA+TGG - chr3_3:91317199-91317218 None:intergenic 20.0%
!!! GACTAATGAGTTTTTTAAAA+AGG + chr3_3:91317351-91317370 Msa0483270:intron 20.0%
!!! CTAATGAGTTTTTTAAAAAG+GGG + chr3_3:91317353-91317372 Msa0483270:intron 20.0%
!! ATTAGATACATCATGTAATT+TGG + chr3_3:91317874-91317893 Msa0483270:three_prime_UTR 20.0%
!! TTAGATACATCATGTAATTT+GGG + chr3_3:91317875-91317894 Msa0483270:three_prime_UTR 20.0%
!!! ACTTTTTATTTTACTAAGCT+TGG - chr3_3:91317936-91317955 None:intergenic 20.0%
!! AAATAAAAAGTCCAGTAATT+TGG + chr3_3:91317945-91317964 Msa0483270:three_prime_UTR 20.0%
!! AATAAAAAGTCCAGTAATTT+GGG + chr3_3:91317946-91317965 Msa0483270:three_prime_UTR 20.0%
!! AATATTTCTATGATGGTTTG+TGG - chr3_3:91314906-91314925 None:intergenic 25.0%
!! GAAGTTTGAAGTTGAAAAAA+TGG + chr3_3:91315053-91315072 Msa0483270:exon 25.0%
!!! ATGGTACCATTTTGTTTTTT+TGG + chr3_3:91315193-91315212 Msa0483270:intron 25.0%
!!! AAATTGTTGGTTTTGTTGTT+TGG + chr3_3:91315221-91315240 Msa0483270:intron 25.0%
!!! TTGCTTTGTTTTGTTAAGAA+TGG + chr3_3:91315245-91315264 Msa0483270:intron 25.0%
! TGTTAAGAATGGTATTTGTT+TGG + chr3_3:91315256-91315275 Msa0483270:intron 25.0%
!!! TTGATTTTATGAGTTGAGTT+AGG + chr3_3:91315361-91315380 Msa0483270:intron 25.0%
!!! GAGATTTTCTTTTTTTGGTT+AGG + chr3_3:91315403-91315422 Msa0483270:intron 25.0%
!!! ATTTGATTTGATTTGGGTTT+TGG + chr3_3:91315441-91315460 Msa0483270:intron 25.0%
!! AGTGTTATGATTTGTGATAT+AGG + chr3_3:91315653-91315672 Msa0483270:intron 25.0%
!!! GAATTTTTTTGAATGAAAGC+AGG + chr3_3:91315736-91315755 Msa0483270:intron 25.0%
! AAACATATCCAAATTCATTC+AGG - chr3_3:91315908-91315927 None:intergenic 25.0%
!!! TCAACTAAAGTTGATGTATT+TGG + chr3_3:91316178-91316197 Msa0483270:intron 25.0%
!!! TCAACTAAAGTTGATGTATT+TGG - chr3_3:91316178-91316197 None:intergenic 25.0%
!! CCTTTTTACAAGAGATAAAT+GGG - chr3_3:91316240-91316259 None:intergenic 25.0%
!! TCCTTTTTACAAGAGATAAA+TGG - chr3_3:91316241-91316260 None:intergenic 25.0%
!!! TTAGTTTTAGTGATTGGTTA+AGG + chr3_3:91316298-91316317 Msa0483270:intron 25.0%
! TTTGTGATTAACTAACTTTG+TGG + chr3_3:91316532-91316551 Msa0483270:intron 25.0%
! AACATATGATTCCATTACTA+AGG + chr3_3:91316761-91316780 Msa0483270:CDS 25.0%
! AAATTGTCTGTCAAAAGTTA+TGG + chr3_3:91317059-91317078 Msa0483270:intron 25.0%
! AATTGTCTGTCAAAAGTTAT+GGG + chr3_3:91317060-91317079 Msa0483270:intron 25.0%
! TCTGTATAAGATAGAATTAG+TGG + chr3_3:91317091-91317110 Msa0483270:intron 25.0%
!!! TTTTTAAAAAGGGGTATGAA+AGG + chr3_3:91317362-91317381 Msa0483270:intron 25.0%
! ACCATAAAATAGTTAACAAG+TGG + chr3_3:91317388-91317407 Msa0483270:intron 25.0%
!!! TCCACTTGTTAACTATTTTA+TGG - chr3_3:91317392-91317411 None:intergenic 25.0%
! AAATGAAAGGTAAAATCAGA+GGG - chr3_3:91318066-91318085 None:intergenic 25.0%
ACTTCAAAACTTCACGTTAA+AGG - chr3_3:91315038-91315057 None:intergenic 30.0%
AAGAATGGTATTTGTTTGGA+TGG + chr3_3:91315260-91315279 Msa0483270:intron 30.0%
ACTTGATCGTGTATCAAATT+TGG + chr3_3:91315475-91315494 Msa0483270:intron 30.0%
CTTGATCGTGTATCAAATTT+GGG + chr3_3:91315476-91315495 Msa0483270:intron 30.0%
! TTTTGTTAAAGGAAGCAACT+TGG + chr3_3:91315532-91315551 Msa0483270:intron 30.0%
AAAACGAGTGTAAATTGATG+AGG + chr3_3:91315700-91315719 Msa0483270:intron 30.0%
!!! TTTTTTGAATGAAAGCAGGA+AGG + chr3_3:91315740-91315759 Msa0483270:intron 30.0%
TGCAATATGTGTGAAAAATG+AGG + chr3_3:91316044-91316063 Msa0483270:intron 30.0%
GCAATATGTGTGAAAAATGA+GGG + chr3_3:91316045-91316064 Msa0483270:intron 30.0%
TTGTCTCTTGTAAAAAGGAT+CGG - chr3_3:91316153-91316172 None:intergenic 30.0%
! TCCTTTTTACAAGAGACAAA+TGG + chr3_3:91316154-91316173 Msa0483270:intron 30.0%
! CCTTTTTACAAGAGACAAAT+GGG + chr3_3:91316155-91316174 Msa0483270:intron 30.0%
CCCATTTATCTCTTGTAAAA+AGG + chr3_3:91316237-91316256 Msa0483270:intron 30.0%
TTATCTCTTGTAAAAAGGAC+CGG + chr3_3:91316242-91316261 Msa0483270:intron 30.0%
!!! TAGTTTTGATATACTCCATC+CGG - chr3_3:91316264-91316283 None:intergenic 30.0%
TCAGTATAAGAGAAAAAGAC+TGG - chr3_3:91316435-91316454 None:intergenic 30.0%
TACTGAAAATATTTAGTCCC+CGG + chr3_3:91316449-91316468 Msa0483270:intron 30.0%
TCATCAATCTAGTTGATCTA+CGG - chr3_3:91316488-91316507 None:intergenic 30.0%
AACTTTGTGGTTTGATGAAT+AGG + chr3_3:91316545-91316564 Msa0483270:intron 30.0%
GGAATCATATGTTGAAAGTA+GGG - chr3_3:91316754-91316773 None:intergenic 30.0%
TGGAATCATATGTTGAAAGT+AGG - chr3_3:91316755-91316774 None:intergenic 30.0%
TTTCTCATTCTCCTTAGTAA+TGG - chr3_3:91316775-91316794 None:intergenic 30.0%
!!! CAAATGTTTTAATGGTCTGA+CGG + chr3_3:91316878-91316897 Msa0483270:intron 30.0%
! TGGAAATTTGCTTCTTATGA+TGG - chr3_3:91317133-91317152 None:intergenic 30.0%
AAATTTCCACTTACCAAAGA+AGG + chr3_3:91317144-91317163 Msa0483270:CDS 30.0%
! TTCGCATAGTTACTTTGAAA+AGG - chr3_3:91317280-91317299 None:intergenic 30.0%
! TAACATGTTGACTATTTCAC+AGG + chr3_3:91317435-91317454 Msa0483270:intron 30.0%
AACTTGAAGCTTCTCATTTA+AGG - chr3_3:91317467-91317486 None:intergenic 30.0%
! TCAGCTTTCTTTTCTAACAA+AGG - chr3_3:91317514-91317533 None:intergenic 30.0%
GAAATGAAAGGTAAAATCAG+AGG - chr3_3:91318067-91318086 None:intergenic 30.0%
! TTTTGAACTGAAGGGTTTAC+CGG - chr3_3:91314742-91314761 None:intergenic 35.0%
!!! GGATTCAGTTTTGAACTGAA+GGG - chr3_3:91314750-91314769 None:intergenic 35.0%
! TTTTACCTTACAGTGCATGA+TGG + chr3_3:91314796-91314815 Msa0483270:five_prime_UTR 35.0%
TTTACCTTACAGTGCATGAT+GGG + chr3_3:91314797-91314816 Msa0483270:five_prime_UTR 35.0%
GAAGTTGAAAAAATGGAGTC+TGG + chr3_3:91315060-91315079 Msa0483270:exon 35.0%
!! AACATGAACATGCTGTTTCT+TGG + chr3_3:91315120-91315139 Msa0483270:CDS 35.0%
TTTCTTGGAAATGCTGATCT+TGG + chr3_3:91315135-91315154 Msa0483270:CDS 35.0%
ATGGTATTTGTTTGGATGGT+TGG + chr3_3:91315264-91315283 Msa0483270:intron 35.0%
TATTTGTTTGGATGGTTGGT+GGG + chr3_3:91315268-91315287 Msa0483270:intron 35.0%
TTATACTGAACACCTTCACT+CGG - chr3_3:91315336-91315355 None:intergenic 35.0%
! ATGAGTTGAGTTAGGTCTTA+TGG + chr3_3:91315369-91315388 Msa0483270:intron 35.0%
! GGTGGGAGATTTTCTTTTTT+TGG + chr3_3:91315398-91315417 Msa0483270:intron 35.0%
CTTGGTTGTGCATCAAAATT+TGG + chr3_3:91315550-91315569 Msa0483270:intron 35.0%
ATATCCAAATTCATTCAGGC+AGG - chr3_3:91315904-91315923 None:intergenic 35.0%
CTAATTGCTGACGAGAAAAA+TGG - chr3_3:91315985-91316004 None:intergenic 35.0%
CCCATTTGTCTCTTGTAAAA+AGG - chr3_3:91316158-91316177 None:intergenic 35.0%
! GATTGGTTAAGGAGAAGTTT+AGG + chr3_3:91316309-91316328 Msa0483270:intron 35.0%
GGTGACTGAAAATTTCCAAT+AGG + chr3_3:91316353-91316372 Msa0483270:intron 35.0%
CATCAATCTAGTTGATCTAC+GGG - chr3_3:91316487-91316506 None:intergenic 35.0%
TGATGAATAGGTCCATATGT+TGG + chr3_3:91316557-91316576 Msa0483270:intron 35.0%
TGTTGAAAGTAGGGAATCAT+AGG - chr3_3:91316745-91316764 None:intergenic 35.0%
GAATGAGAAACTCAAATCTG+AGG + chr3_3:91316785-91316804 Msa0483270:CDS 35.0%
ACTTACCAAAGAAGGTGATT+GGG + chr3_3:91317152-91317171 Msa0483270:CDS 35.0%
TAGTGTAGAATCTTATGGGT+AGG - chr3_3:91317194-91317213 None:intergenic 35.0%
! TTAAAAAGGGGTATGAAAGG+TGG + chr3_3:91317365-91317384 Msa0483270:intron 35.0%
ATCATGTAATTTGGGTGCTT+TGG + chr3_3:91317883-91317902 Msa0483270:three_prime_UTR 35.0%
TCATGTAATTTGGGTGCTTT+GGG + chr3_3:91317884-91317903 Msa0483270:three_prime_UTR 35.0%
TTAGAGACATTTCAACACCT+AGG - chr3_3:91317912-91317931 None:intergenic 35.0%
! AGTTTTCCGGTGAGGTTTTT+TGG - chr3_3:91314689-91314708 None:intergenic 40.0%
!!! GGGATTCAGTTTTGAACTGA+AGG - chr3_3:91314751-91314770 None:intergenic 40.0%
!! AAGGTAAAAACCACCGATTC+CGG - chr3_3:91314785-91314804 None:intergenic 40.0%
AACCTTGCTGGAGTTTCTAA+CGG - chr3_3:91314836-91314855 None:intergenic 40.0%
!! AATGCTGATCTTGGTTTTCG+TGG + chr3_3:91315144-91315163 Msa0483270:CDS 40.0%
GTATTTGTTTGGATGGTTGG+TGG + chr3_3:91315267-91315286 Msa0483270:intron 40.0%
TATACTGAACACCTTCACTC+GGG - chr3_3:91315335-91315354 None:intergenic 40.0%
! AGTTAGGTCTTATGGACAGA+TGG + chr3_3:91315377-91315396 Msa0483270:intron 40.0%
TCCTCATCATACAGTTCATC+CGG - chr3_3:91315817-91315836 None:intergenic 40.0%
CTCTTGTAAAAAGGATCGGA+GGG - chr3_3:91316149-91316168 None:intergenic 40.0%
TCTCTTGTAAAAAGGATCGG+AGG - chr3_3:91316150-91316169 None:intergenic 40.0%
TGGTTAAGGAGAAGTTTAGG+TGG + chr3_3:91316312-91316331 Msa0483270:intron 40.0%
! GAAATTTTCAGTCACCAGAG+AGG - chr3_3:91316349-91316368 None:intergenic 40.0%
AAAATATTTAGTCCCCGGAG+AGG + chr3_3:91316454-91316473 Msa0483270:intron 40.0%
ATCTAGTTGATCTACGGGTT+TGG - chr3_3:91316482-91316501 None:intergenic 40.0%
CAAAGCTCTTCTCCAACATA+TGG - chr3_3:91316572-91316591 None:intergenic 40.0%
TATGTTGGAGAAGAGCTTTG+AGG + chr3_3:91316572-91316591 Msa0483270:CDS 40.0%
AGGTTGCAATCCTAGTTTCT+TGG - chr3_3:91316637-91316656 None:intergenic 40.0%
AGAAACTAGGATTGCAACCT+AGG + chr3_3:91316637-91316656 Msa0483270:CDS 40.0%
TGTATGGTTTCAGAACCGTA+GGG + chr3_3:91316668-91316687 Msa0483270:CDS 40.0%
CAATCACCTTCTTTGGTAAG+TGG - chr3_3:91317153-91317172 None:intergenic 40.0%
CACTTACCAAAGAAGGTGAT+TGG + chr3_3:91317151-91317170 Msa0483270:CDS 40.0%
!! AAAGGCTTTTTCTTCACACC+AGG - chr3_3:91317262-91317281 None:intergenic 40.0%
! CATGTTGACTATTTCACAGG+TGG + chr3_3:91317438-91317457 Msa0483270:intron 40.0%
AAAATCTGAGCTATGTCCAC+TGG - chr3_3:91317544-91317563 None:intergenic 40.0%
! AGCTCAGATTTTCAGCATCA+AGG + chr3_3:91317552-91317571 Msa0483270:CDS 40.0%
! TCAGATTTTCAGCATCAAGG+TGG + chr3_3:91317555-91317574 Msa0483270:CDS 40.0%
CTAGATTGAGAGAGAATCAG+AGG + chr3_3:91317706-91317725 Msa0483270:exon 40.0%
AGAGAATCAGAGGAAGATGA+TGG + chr3_3:91317716-91317735 Msa0483270:three_prime_UTR 40.0%
GAGAATCAGAGGAAGATGAT+GGG + chr3_3:91317717-91317736 Msa0483270:three_prime_UTR 40.0%
!! AAGATGATGGGAGTGATGAT+GGG + chr3_3:91317729-91317748 Msa0483270:three_prime_UTR 40.0%
AAGTCCAGTAATTTGGGCAA+TGG + chr3_3:91317952-91317971 Msa0483270:three_prime_UTR 40.0%
CACACACCAAAAAACCTCAC+CGG + chr3_3:91314680-91314699 Msa0483270:five_prime_UTR 45.0%
TGAATCCCTTCAAAGACCAC+CGG + chr3_3:91314763-91314782 Msa0483270:five_prime_UTR 45.0%
AGATCCCATCATGCACTGTA+AGG - chr3_3:91314804-91314823 None:intergenic 45.0%
AAACTCCAGCAAGGTTGCTT+TGG + chr3_3:91314840-91314859 Msa0483270:five_prime_UTR 45.0%
TTTGATTCTCCTGCTTGTCG+TGG + chr3_3:91315093-91315112 Msa0483270:CDS 45.0%
TTGATTCTCCTGCTTGTCGT+GGG + chr3_3:91315094-91315113 Msa0483270:CDS 45.0%
ATGTTATTCCCACGACAAGC+AGG - chr3_3:91315105-91315124 None:intergenic 45.0%
CTCAGTTGTGTGTGAGTTTC+AGG - chr3_3:91315297-91315316 None:intergenic 45.0%
CACACACAACTGAGAAGTTC+AGG + chr3_3:91315303-91315322 Msa0483270:intron 45.0%
! TAGGTCTTATGGACAGATGG+TGG + chr3_3:91315380-91315399 Msa0483270:intron 45.0%
! AGGTCTTATGGACAGATGGT+GGG + chr3_3:91315381-91315400 Msa0483270:intron 45.0%
AGGAAGGTCAATGATGAGCA+TGG + chr3_3:91315756-91315775 Msa0483270:intron 45.0%
GGAAGGTCAATGATGAGCAT+GGG + chr3_3:91315757-91315776 Msa0483270:intron 45.0%
GAAGGTCAATGATGAGCATG+GGG + chr3_3:91315758-91315777 Msa0483270:CDS 45.0%
AAGGTCAATGATGAGCATGG+GGG + chr3_3:91315759-91315778 Msa0483270:CDS 45.0%
! GAGACCTTTCTTTAGCTCAC+CGG + chr3_3:91315795-91315814 Msa0483270:CDS 45.0%
TCATCCGGTGAGCTAAAGAA+AGG - chr3_3:91315802-91315821 None:intergenic 45.0%
ACCGGATGAACTGTATGATG+AGG + chr3_3:91315813-91315832 Msa0483270:CDS 45.0%
GTACTACGAAGAACAGTCAC+CGG + chr3_3:91315837-91315856 Msa0483270:CDS 45.0%
CTTGCCTGCCTGAATGAATT+TGG + chr3_3:91315897-91315916 Msa0483270:intron 45.0%
CTCTTGTAAAAAGGACCGGA+TGG + chr3_3:91316246-91316265 Msa0483270:intron 45.0%
TCAGTCACCAGAGAGGATTT+GGG - chr3_3:91316342-91316361 None:intergenic 45.0%
TTCAGTCACCAGAGAGGATT+TGG - chr3_3:91316343-91316362 None:intergenic 45.0%
CCAGTCTTACTCGATCCTAT+TGG - chr3_3:91316371-91316390 None:intergenic 45.0%
CCAATAGGATCGAGTAAGAC+TGG + chr3_3:91316368-91316387 Msa0483270:intron 45.0%
TAGGATCGAGTAAGACTGGT+TGG + chr3_3:91316372-91316391 Msa0483270:intron 45.0%
! AGGATCGAGTAAGACTGGTT+GGG + chr3_3:91316373-91316392 Msa0483270:intron 45.0%
AGAACAAACTTGAGCCAGAG+AGG + chr3_3:91316598-91316617 Msa0483270:CDS 45.0%
TCCTAGTTTCTTGGCCAACT+GGG - chr3_3:91316628-91316647 None:intergenic 45.0%
ATCCTAGTTTCTTGGCCAAC+TGG - chr3_3:91316629-91316648 None:intergenic 45.0%
CTGTATGGTTTCAGAACCGT+AGG + chr3_3:91316667-91316686 Msa0483270:CDS 45.0%
TTGTCTTCCATCTAGCCCTA+CGG - chr3_3:91316686-91316705 None:intergenic 45.0%
TAGCTCCCAATCACCTTCTT+TGG - chr3_3:91317160-91317179 None:intergenic 45.0%
AGGTGATTGGGAGCTATCAA+AGG + chr3_3:91317164-91317183 Msa0483270:CDS 45.0%
TGATTGGGAGCTATCAAAGG+AGG + chr3_3:91317167-91317186 Msa0483270:CDS 45.0%
! CTTTTTCTTCACACCAGGTG+GGG - chr3_3:91317257-91317276 None:intergenic 45.0%
!! GCTTTTTCTTCACACCAGGT+GGG - chr3_3:91317258-91317277 None:intergenic 45.0%
AACAATGACACCAACGACAC+GGG - chr3_3:91317635-91317654 None:intergenic 45.0%
CAACAATGACACCAACGACA+CGG - chr3_3:91317636-91317655 None:intergenic 45.0%
TTTCCAGCTGACAACTATGC+TGG + chr3_3:91317673-91317692 Msa0483270:CDS 45.0%
TGACAACTATGCTGGATGTG+TGG + chr3_3:91317681-91317700 Msa0483270:CDS 45.0%
!! GAAGATGATGGGAGTGATGA+TGG + chr3_3:91317728-91317747 Msa0483270:three_prime_UTR 45.0%
TGAGCAACAACCATGAAGAG+AGG + chr3_3:91317787-91317806 Msa0483270:three_prime_UTR 45.0%
AACAACCATGAAGAGAGGAG+AGG + chr3_3:91317792-91317811 Msa0483270:three_prime_UTR 45.0%
CACAGAAAACACCCGGTTGA+AGG + chr3_3:91314639-91314658 Msa0483270:five_prime_UTR 50.0%
TCACCGGAAAACTCCATCTC+CGG + chr3_3:91314696-91314715 Msa0483270:five_prime_UTR 50.0%
TGAACTGAAGGGTTTACCGG+AGG - chr3_3:91314739-91314758 None:intergenic 50.0%
CGATTCCGGTGGTCTTTGAA+GGG - chr3_3:91314771-91314790 None:intergenic 50.0%
CCTTCAAAGACCACCGGAAT+CGG + chr3_3:91314769-91314788 Msa0483270:five_prime_UTR 50.0%
!! GTAAAAACCACCGATTCCGG+TGG - chr3_3:91314782-91314801 None:intergenic 50.0%
GTCCGTTAGAAACTCCAGCA+AGG + chr3_3:91314831-91314850 Msa0483270:five_prime_UTR 50.0%
GTTGTCCAAAGCAACCTTGC+TGG - chr3_3:91314848-91314867 None:intergenic 50.0%
TCAATGATGAGCATGGGGGA+AGG + chr3_3:91315763-91315782 Msa0483270:CDS 50.0%
TGGAGAACCCAAATCCTCTC+TGG + chr3_3:91316332-91316351 Msa0483270:intron 50.0%
ACCCAGTTGGCCAAGAAACT+AGG + chr3_3:91316624-91316643 Msa0483270:CDS 50.0%
ACTAGGATTGCAACCTAGGC+AGG + chr3_3:91316641-91316660 Msa0483270:CDS 50.0%
TTCAGAACCGTAGGGCTAGA+TGG + chr3_3:91316676-91316695 Msa0483270:CDS 50.0%
!! GGCTTTTTCTTCACACCAGG+TGG - chr3_3:91317259-91317278 None:intergenic 50.0%
GAAAGCTGATCCACTTCCAG+TGG + chr3_3:91317525-91317544 Msa0483270:CDS 50.0%
TGAGCTATGTCCACTGGAAG+TGG - chr3_3:91317538-91317557 None:intergenic 50.0%
GTGGATGACCACATGAGTTC+TGG + chr3_3:91317574-91317593 Msa0483270:CDS 50.0%
CAACGCTTCCAGAACTCATG+TGG - chr3_3:91317585-91317604 None:intergenic 50.0%
!! CACATGAGTTCTGGAAGCGT+TGG + chr3_3:91317583-91317602 Msa0483270:CDS 50.0%
ACAATGACACCAACGACACG+GGG - chr3_3:91317634-91317653 None:intergenic 50.0%
CATCCAGCATAGTTGTCAGC+TGG - chr3_3:91317679-91317698 None:intergenic 50.0%
!! ATGATGGGAGTGATGATGGG+AGG + chr3_3:91317732-91317751 Msa0483270:three_prime_UTR 50.0%
!! AAGAGAGGAGAGGCACTGAT+TGG + chr3_3:91317802-91317821 Msa0483270:three_prime_UTR 50.0%
GACGCCATTGCCCAAATTAC+TGG - chr3_3:91317959-91317978 None:intergenic 50.0%
AGAGAGAGGGAGCCTTCAAC+CGG - chr3_3:91314654-91314673 None:intergenic 55.0%
! GGAGATGGAGTTTTCCGGTG+AGG - chr3_3:91314697-91314716 None:intergenic 55.0%
! TGGCCGGAGATGGAGTTTTC+CGG - chr3_3:91314702-91314721 None:intergenic 55.0%
AAAACTCCATCTCCGGCCAC+CGG + chr3_3:91314703-91314722 Msa0483270:five_prime_UTR 55.0%
CTGAAGGGTTTACCGGAGGA+AGG - chr3_3:91314735-91314754 None:intergenic 55.0%
CCGATTCCGGTGGTCTTTGA+AGG - chr3_3:91314772-91314791 None:intergenic 55.0%
TCAAAGACCACCGGAATCGG+TGG + chr3_3:91314772-91314791 Msa0483270:five_prime_UTR 55.0%
TCAGGTTCGAACCCGAGTGA+AGG + chr3_3:91315321-91315340 Msa0483270:intron 55.0%
GCATGGGGGAAGGCTCAAAA+AGG + chr3_3:91315773-91315792 Msa0483270:CDS 55.0%
AACCAACCTGCTCGGAAGTG+AGG - chr3_3:91315876-91315895 None:intergenic 55.0%
AGGCAAGCAACCAACCTGCT+CGG - chr3_3:91315884-91315903 None:intergenic 55.0%
! TACGGGTTTGGTTCCTCTCC+GGG - chr3_3:91316470-91316489 None:intergenic 55.0%
! CTACGGGTTTGGTTCCTCTC+CGG - chr3_3:91316471-91316490 None:intergenic 55.0%
GCCAGAGAGGAAAACCCAGT+TGG + chr3_3:91316611-91316630 Msa0483270:CDS 55.0%
! GCCAACTGGGTTTTCCTCTC+TGG - chr3_3:91316615-91316634 None:intergenic 55.0%
AGGATTGCAACCTAGGCAGG+TGG + chr3_3:91316644-91316663 Msa0483270:CDS 55.0%
AACCTAGGCAGGTGGCTGTA+TGG + chr3_3:91316652-91316671 Msa0483270:CDS 55.0%
AACCATACAGCCACCTGCCT+AGG - chr3_3:91316657-91316676 None:intergenic 55.0%
! CATCTGTTCTGAACCCCACC+TGG + chr3_3:91317241-91317260 Msa0483270:intron 55.0%
!! TGGAAGCGTTGGAAGTGCAG+TGG + chr3_3:91317594-91317613 Msa0483270:CDS 55.0%
!! AAGCGTTGGAAGTGCAGTGG+TGG + chr3_3:91317597-91317616 Msa0483270:CDS 55.0%
CAATGACACCAACGACACGG+GGG - chr3_3:91317633-91317652 None:intergenic 55.0%
CAGTGCCTCTCCTCTCTTCA+TGG - chr3_3:91317800-91317819 None:intergenic 55.0%
!! AGAGGAGAGGCACTGATTGG+TGG + chr3_3:91317805-91317824 Msa0483270:three_prime_UTR 55.0%
!! GAGGAGAGGCACTGATTGGT+GGG + chr3_3:91317806-91317825 Msa0483270:three_prime_UTR 55.0%
!! AGGAGAGGCACTGATTGGTG+GGG + chr3_3:91317807-91317826 Msa0483270:three_prime_UTR 55.0%
GAGAGAGGGAGCCTTCAACC+GGG - chr3_3:91314653-91314672 None:intergenic 60.0%
GTGTGTGCGTGCGAGAGAGA+GGG - chr3_3:91314667-91314686 None:intergenic 60.0%
TACCGGAGGAAGGAGAACGC+CGG - chr3_3:91314725-91314744 None:intergenic 60.0%
CAACCTGCTCGGAAGTGAGG+CGG - chr3_3:91315873-91315892 None:intergenic 60.0%
! ACGGGTTTGGTTCCTCTCCG+GGG - chr3_3:91316469-91316488 None:intergenic 60.0%
! TTTGGGTGCTTTGGGCGCCT+AGG + chr3_3:91317892-91317911 Msa0483270:three_prime_UTR 60.0%
GGTGTGTGCGTGCGAGAGAG+AGG - chr3_3:91314668-91314687 None:intergenic 65.0%
CACCGGCGTTCTCCTTCCTC+CGG + chr3_3:91314720-91314739 Msa0483270:five_prime_UTR 65.0%
GTGAGGCGGCGCTTCTTCTC+CGG - chr3_3:91315859-91315878 None:intergenic 65.0%
CGCCTCACTTCCGAGCAGGT+TGG + chr3_3:91315871-91315890 Msa0483270:intron 65.0%
GAGAGTAGCCCCCGTGTCGT+TGG + chr3_3:91317622-91317641 Msa0483270:CDS 65.0%
AGAACGCCGGTGGCCGGAGA+TGG - chr3_3:91314712-91314731 None:intergenic 70.0%
GGAAGGAGAACGCCGGTGGC+CGG - chr3_3:91314718-91314737 None:intergenic 70.0%
CGGAGGAAGGAGAACGCCGG+TGG - chr3_3:91314722-91314741 None:intergenic 70.0%
GCGCCGCCTCACTTCCGAGC+AGG + chr3_3:91315867-91315886 Msa0483270:CDS 75.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 91314638 91318092 91314638 ID=Msa0483270;Name=Msa0483270
chr3_3 mRNA 91314638 91318092 91314638 ID=Msa0483270-mRNA-1;Parent=Msa0483270;Name=Msa0483270-mRNA-1;_AED=0.04;_eAED=0.04;_QI=434|0.5|0.8|0.8|1|1|5|378|261
chr3_3 exon 91314638 91315165 91314638 ID=Msa0483270-mRNA-1:exon:26652;Parent=Msa0483270-mRNA-1
chr3_3 exon 91315758 91315888 91315758 ID=Msa0483270-mRNA-1:exon:26653;Parent=Msa0483270-mRNA-1
chr3_3 exon 91316567 91316806 91316567 ID=Msa0483270-mRNA-1:exon:26654;Parent=Msa0483270-mRNA-1
chr3_3 exon 91317126 91317188 91317126 ID=Msa0483270-mRNA-1:exon:26655;Parent=Msa0483270-mRNA-1
chr3_3 exon 91317457 91318092 91317457 ID=Msa0483270-mRNA-1:exon:26656;Parent=Msa0483270-mRNA-1
chr3_3 five_prime_UTR 91314638 91315071 91314638 ID=Msa0483270-mRNA-1:five_prime_utr;Parent=Msa0483270-mRNA-1
chr3_3 CDS 91315072 91315165 91315072 ID=Msa0483270-mRNA-1:cds;Parent=Msa0483270-mRNA-1
chr3_3 CDS 91315758 91315888 91315758 ID=Msa0483270-mRNA-1:cds;Parent=Msa0483270-mRNA-1
chr3_3 CDS 91316567 91316806 91316567 ID=Msa0483270-mRNA-1:cds;Parent=Msa0483270-mRNA-1
chr3_3 CDS 91317126 91317188 91317126 ID=Msa0483270-mRNA-1:cds;Parent=Msa0483270-mRNA-1
chr3_3 CDS 91317457 91317714 91317457 ID=Msa0483270-mRNA-1:cds;Parent=Msa0483270-mRNA-1
chr3_3 three_prime_UTR 91317715 91318092 91317715 ID=Msa0483270-mRNA-1:three_prime_utr;Parent=Msa0483270-mRNA-1
Gene Sequence

>Msa0483270

ATGGAGTCTGGTCGTCTTTACTTTGATTCTCCTGCTTGTCGTGGGAATAACATGAACATGCTGTTTCTTGGAAATGCTGATCTTGGTTTTCGTGGAAGGTCAATGATGAGCATGGGGGAAGGCTCAAAAAGGAGACCTTTCTTTAGCTCACCGGATGAACTGTATGATGAGGAGTACTACGAAGAACAGTCACCGGAGAAGAAGCGCCGCCTCACTTCCGAGCAGGTCCATATGTTGGAGAAGAGCTTTGAGGAAGAGAACAAACTTGAGCCAGAGAGGAAAACCCAGTTGGCCAAGAAACTAGGATTGCAACCTAGGCAGGTGGCTGTATGGTTTCAGAACCGTAGGGCTAGATGGAAGACAAAACAACTTGAAAGAGATTATGATGTTCTCAAGTCTTCCTATGATTCCCTACTTTCAACATATGATTCCATTACTAAGGAGAATGAGAAACTCAAATCTGAGAACTCCATCATAAGAAGCAAATTTCCACTTACCAAAGAAGGTGATTGGGAGCTATCAAAGGAGGTGGTATCCTTAAATGAGAAGCTTCAAGTTCAAGCTAAAGATATGCTTGAAGAACCTTTGTTAGAAAAGAAAGCTGATCCACTTCCAGTGGACATAGCTCAGATTTTCAGCATCAAGGTGGATGACCACATGAGTTCTGGAAGCGTTGGAAGTGCAGTGGTGGACGAGAGTAGCCCCCGTGTCGTTGGTGTCATTGTTGACAGCGTCGATTCATACTTTCCAGCTGACAACTATGCTGGATGTGTGGCTCTAGATTGA
Protein sequence

>Msa0483270

MESGRLYFDSPACRGNNMNMLFLGNADLGFRGRSMMSMGEGSKRRPFFSSPDELYDEEYYEEQSPEKKRRLTSEQVHMLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDVLKSSYDSLLSTYDSITKENEKLKSENSIIRSKFPLTKEGDWELSKEVVSLNEKLQVQAKDMLEEPLLEKKADPLPVDIAQIFSIKVDDHMSSGSVGSAVVDESSPRVVGVIVDSVDSYFPADNYAGCVALD*