AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0483790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0483790 MtrunA17_Chr3g0091621 98.896 453 2 1 1 450 1 453 0.0 932
Msa0483790 MtrunA17_Chr4g0061061 83.850 452 67 4 1 450 1 448 0.0 777
Msa0483790 MtrunA17_Chr7g0269221 57.301 452 156 5 33 447 10 461 0.0 550
Msa0483790 MtrunA17_Chr4g0067341 58.701 431 153 4 33 438 10 440 0.0 543
Msa0483790 MtrunA17_Chr4g0054201 45.430 372 155 7 94 432 522 878 6.88e-107 336
Msa0483790 MtrunA17_Chr4g0054201 45.970 335 141 7 110 409 73 402 1.09e-93 301
Msa0483790 MtrunA17_Chr5g0401011 40.000 425 206 10 29 414 17 431 2.28e-106 322
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0483790 AT5G07720.1 77.024 457 98 3 1 450 1 457 0.0 752
Msa0483790 AT1G74380.1 77.511 458 94 5 1 450 1 457 0.0 727
Msa0483790 AT1G18690.3 65.226 486 102 5 27 445 26 511 0.0 635
Msa0483790 AT1G18690.4 65.226 486 102 5 27 445 26 511 0.0 635
Msa0483790 AT1G18690.2 65.226 486 102 5 27 445 26 511 0.0 635
Msa0483790 AT1G18690.1 65.226 486 102 5 27 445 26 511 0.0 635
Msa0483790 AT3G62720.2 58.257 436 152 5 33 438 10 445 0.0 535
Msa0483790 AT3G62720.1 58.257 436 152 5 33 438 10 445 0.0 535
Msa0483790 AT4G02500.1 58.581 437 150 5 33 438 10 446 0.0 526
Msa0483790 AT2G22900.1 41.176 374 173 8 80 414 66 431 4.41e-95 294
Msa0483790 AT4G37690.1 41.570 344 157 5 110 414 76 414 5.43e-95 293
Msa0483790 AT4G38310.1 45.192 104 52 3 110 211 17 117 5.57e-24 97.1

Find 160 sgRNAs with CRISPR-Local

Find 235 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTATGTTTATTAGAGAAAA+TGG 0.172631 3_4:-551873 None:intergenic
CTTTCTATTTGCATGGTTAT+TGG 0.211134 3_4:+554420 Msa0483790:CDS
ACATGGAGCTTGCAGGTTAC+TGG 0.215014 3_4:+553985 Msa0483790:CDS
AATCAAGTGCTTAAACTCTA+TGG 0.218743 3_4:+554617 Msa0483790:CDS
TTTCTATTTGCATGGTTATT+GGG 0.219207 3_4:+554421 Msa0483790:CDS
CACTGCATTGTGAATGTTTC+AGG 0.238943 3_4:-554880 None:intergenic
CCTTCGAATCATCGGCAATT+TGG 0.239100 3_4:-554009 None:intergenic
GCTCCCTTCTCTCAGTTCTC+TGG 0.239364 3_4:+551845 Msa0483790:five_prime_UTR
TTCTCTCAGTATCCCAATTA+AGG 0.247028 3_4:-552392 None:intergenic
TCCATGTCCTGTTAAAATTC+AGG 0.256565 3_4:+555147 Msa0483790:three_prime_UTR
TTGGTCCTAAGATCCTTAAT+TGG 0.264667 3_4:+552379 Msa0483790:CDS
GGCTTCCCCTTAACAAAATT+AGG 0.282350 3_4:-552444 None:intergenic
TTCCCAGCCTCTTCTCGAAT+TGG 0.291305 3_4:-554278 None:intergenic
CACCAAATCCACTCCACTTC+AGG 0.295318 3_4:-554047 None:intergenic
TGTGTACAACATGGCTCATT+TGG 0.303900 3_4:+553962 Msa0483790:CDS
TAGAAGTTTGATTTGGGTTT+GGG 0.308850 3_4:-551930 None:intergenic
TGTTGTTCGAGCAGAATTCT+TGG 0.311777 3_4:+554165 Msa0483790:CDS
GTTGTCTTTGGTAAGTTAAT+CGG 0.311893 3_4:+555001 Msa0483790:three_prime_UTR
CTCCCTTCTCTCAGTTCTCT+GGG 0.314206 3_4:+551846 Msa0483790:five_prime_UTR
TAGAACTTAGAAGTTTGATT+TGG 0.315370 3_4:-551937 None:intergenic
CGTTGGATTTGCTTGATGCT+TGG 0.318309 3_4:+554234 Msa0483790:CDS
GTATCCCAATTAAGGATCTT+AGG 0.329038 3_4:-552384 None:intergenic
TATTTGCATGGTTATTGGGC+TGG 0.334350 3_4:+554425 Msa0483790:CDS
AGAATAAGATTGATTATTGC+AGG 0.335344 3_4:+552547 Msa0483790:CDS
ATTCAAACTCATAAAAGTTT+CGG 0.342769 3_4:-552343 None:intergenic
AGAACTTAGAAGTTTGATTT+GGG 0.353231 3_4:-551936 None:intergenic
TCCCAGCCTCTTCTCGAATT+GGG 0.354694 3_4:-554277 None:intergenic
GGTTTGGGTGAGAATTTGAT+AGG 0.362109 3_4:-551915 None:intergenic
CATTTGGACATGGAGCTTGC+AGG 0.365757 3_4:+553978 Msa0483790:CDS
GTTGGATTTGCTTGATGCTT+GGG 0.365810 3_4:+554235 Msa0483790:CDS
GATTATAATATGGTTATTCA+TGG 0.367610 3_4:+554131 Msa0483790:CDS
TTAGAAGTTTGATTTGGGTT+TGG 0.374969 3_4:-551931 None:intergenic
TAAATATAAAGATTATAATA+TGG 0.375741 3_4:+554121 Msa0483790:CDS
TTGAATGAAACTTATGCTCT+TGG 0.381407 3_4:+552360 Msa0483790:CDS
AAAAGATAATGATCACCAAT+AGG 0.391177 3_4:-552513 None:intergenic
TCTTCTCGAATTGGGCCTTT+CGG 0.392147 3_4:-554269 None:intergenic
AATTGGGCCTTTCGGACCCA+TGG 0.393150 3_4:-554261 None:intergenic
TGCTTAAACTCTATGGGTTT+AGG 0.393742 3_4:+554624 Msa0483790:CDS
ACCCTGAAGTGGAGTGGATT+TGG 0.394154 3_4:+554045 Msa0483790:CDS
GAGAAGTATCATCCGGGGCT+AGG 0.395034 3_4:+554476 Msa0483790:CDS
ATTGGGCTGGGTTGGTTGAT+CGG 0.403121 3_4:+554438 Msa0483790:CDS
GTCCTAAAATCAAGCGGATC+AGG 0.412056 3_4:+554663 Msa0483790:CDS
TTGTGGGGTGTAAGCCTTGT+GGG 0.414516 3_4:+554528 Msa0483790:CDS
CTACTAAGGCATCTCTCTAC+TGG 0.417101 3_4:-554566 None:intergenic
TGTAAGCCTTGTGGGAGTTA+TGG 0.420456 3_4:+554536 Msa0483790:CDS
AAAGTTACATGTCCACCTAT+TGG 0.421549 3_4:-554964 None:intergenic
AAGATAAAATTCTTTCATAC+AGG 0.426666 3_4:+555034 Msa0483790:three_prime_UTR
CACAAGGAAAGTAACATGTT+TGG 0.429461 3_4:+554925 Msa0483790:three_prime_UTR
CATGGAGCTTGCAGGTTACT+GGG 0.431346 3_4:+553986 Msa0483790:CDS
AGAAGTATCATCCGGGGCTA+GGG 0.432077 3_4:+554477 Msa0483790:CDS
GAGAAGGGAGCATGTGATAG+TGG 0.436514 3_4:-551833 None:intergenic
TGCTGTCAAAGAAGGACAAA+TGG 0.438378 3_4:+554372 Msa0483790:CDS
CTCGTCCTACGTGGCACAAT+CGG 0.441138 3_4:+552207 Msa0483790:CDS
ATTTGCATGGTTATTGGGCT+GGG 0.441189 3_4:+554426 Msa0483790:CDS
TGGTCCTAAGATCCTTAATT+GGG 0.442563 3_4:+552380 Msa0483790:CDS
TGTTGGTAATCCTCCTGTGC+TGG 0.443020 3_4:-552079 None:intergenic
ATTGGGCCTTTCGGACCCAT+GGG 0.445046 3_4:-554260 None:intergenic
GAGGTTGGTGTTGTTGTTGT+TGG 0.447220 3_4:-552096 None:intergenic
TTCTGCTCGAACAACAAATC+AGG 0.448355 3_4:-554158 None:intergenic
CAAAGGAAGGCCAGCGTTCG+AGG 0.448528 3_4:+554319 Msa0483790:CDS
ATCGGATCTCAGCGAGGATA+CGG 0.453679 3_4:-552290 None:intergenic
CATTTCAATTGTGGTGCTGC+TGG 0.457783 3_4:-555209 None:intergenic
GCATGGTTATTGGGCTGGGT+TGG 0.459215 3_4:+554430 Msa0483790:CDS
ATATTTATTGCTGTCAAAGA+AGG 0.460969 3_4:+554364 Msa0483790:CDS
AAGCCGTGTGATAATCCTAT+TGG 0.466725 3_4:+552498 Msa0483790:CDS
CCCACAAAATGCGTCACAAA+AGG 0.477497 3_4:-554512 None:intergenic
GTTGCCTTCGTATATCAAAC+TGG 0.478121 3_4:-554718 None:intergenic
TAACAAAATTAGGATATTCA+CGG 0.478655 3_4:-552434 None:intergenic
ATAATCTTTATATTTACTCA+TGG 0.485294 3_4:-554114 None:intergenic
ATCAAGTGCTTAAACTCTAT+GGG 0.487154 3_4:+554618 Msa0483790:CDS
GAGAATTCTTTCTATTTGCA+TGG 0.494521 3_4:+554413 Msa0483790:CDS
AAGCCCTCTCCATGCTACTA+AGG 0.496820 3_4:-554580 None:intergenic
GGCCCAATTCGAGAAGAGGC+TGG 0.499495 3_4:+554275 Msa0483790:CDS
TGATCATCAGCCTCGAACGC+TGG 0.500069 3_4:-554329 None:intergenic
AGGGAGCATGTGATAGTGGA+GGG 0.500381 3_4:-551829 None:intergenic
ACCAAATCCACTCCACTTCA+GGG 0.502114 3_4:-554046 None:intergenic
TCGCAATTGCCAGTGGTCGT+TGG 0.510685 3_4:+554217 Msa0483790:CDS
GAACATTAACATTTCAATTG+TGG 0.516142 3_4:-555218 None:intergenic
CACCTCTCATCCCCTAGCCC+CGG 0.519476 3_4:-554488 None:intergenic
GATGATGGAGAAGTATCATC+CGG 0.521609 3_4:+554469 Msa0483790:CDS
GTTTGGGTGAGAATTTGATA+GGG 0.526486 3_4:-551914 None:intergenic
TCGGTCTGATTCCGATCAGA+TGG 0.529115 3_4:-552324 None:intergenic
CAAGCAAATCCAACGACCAC+TGG 0.529363 3_4:-554226 None:intergenic
CGGGGCTAGGGGATGAGAGG+TGG 0.529526 3_4:+554489 Msa0483790:CDS
AACATGAGCCTTCGAATCAT+CGG 0.529996 3_4:-554017 None:intergenic
AAGGGAGCATGTGATAGTGG+AGG 0.532628 3_4:-551830 None:intergenic
TAATCTTTATATTTACTCAT+GGG 0.532867 3_4:-554113 None:intergenic
ATAGGATTATCACACGGCTT+CGG 0.537745 3_4:-552495 None:intergenic
CCAAATTGCCGATGATTCGA+AGG 0.538068 3_4:+554009 Msa0483790:CDS
AACTGGTCTACAAACTCTAA+AGG 0.539086 3_4:-554701 None:intergenic
GAAGTATCATCCGGGGCTAG+GGG 0.539735 3_4:+554478 Msa0483790:CDS
GGATTATCACACGGCTTCGG+AGG 0.542382 3_4:-552492 None:intergenic
GACGTCCACGTGGCAGTGTA+CGG 0.545246 3_4:-552125 None:intergenic
AACCCAGAGAACTGAGAGAA+GGG 0.545391 3_4:-551848 None:intergenic
AGTGTACGGTTACGCGAGGT+TGG 0.545877 3_4:-552111 None:intergenic
ATTATAATATGGTTATTCAT+GGG 0.546527 3_4:+554132 Msa0483790:CDS
AGAGAGATGCCTTAGTAGCA+TGG 0.561542 3_4:+554571 Msa0483790:CDS
CAAACATGTTACTTTCCTTG+TGG 0.562501 3_4:-554924 None:intergenic
GCCCAATTCGAGAAGAGGCT+GGG 0.564968 3_4:+554276 Msa0483790:CDS
GTCAAAGAAGGACAAATGGA+TGG 0.573047 3_4:+554376 Msa0483790:CDS
GGCACAATCGGCGTTAACCT+CGG 0.573140 3_4:+552219 Msa0483790:CDS
TCTTGGATCGCAATCAACAC+AGG 0.574658 3_4:+554182 Msa0483790:CDS
TGATCGGTATGAAGAGATGA+TGG 0.577526 3_4:+554454 Msa0483790:CDS
CATGTTATCACACCCTGAAG+TGG 0.577774 3_4:+554034 Msa0483790:CDS
GTGGTGATGCTATAGCCAAT+AGG 0.579299 3_4:+554949 Msa0483790:three_prime_UTR
CTGAAGTGGAGTGGATTTGG+TGG 0.580330 3_4:+554048 Msa0483790:CDS
TTGGGCCTTTCGGACCCATG+GGG 0.585320 3_4:-554259 None:intergenic
ATCCGGGGCTAGGGGATGAG+AGG 0.586128 3_4:+554486 Msa0483790:CDS
AATTACTGATTACTCAAACT+CGG 0.590025 3_4:-555073 None:intergenic
GAAGGACAAATGGATGGAGA+AGG 0.593298 3_4:+554382 Msa0483790:CDS
ATGCCTTAGTAGCATGGAGA+GGG 0.593651 3_4:+554577 Msa0483790:CDS
TGACGGCAAATCTCAAAGGA+AGG 0.593858 3_4:+554306 Msa0483790:CDS
TAGCGTCGTGACATCAATTG+AGG 0.594255 3_4:-554833 None:intergenic
GAAAGGCCCAATTCGAGAAG+AGG 0.594485 3_4:+554271 Msa0483790:CDS
ATGATGGAGAAGTATCATCC+GGG 0.594919 3_4:+554470 Msa0483790:CDS
TAGACCAGTTTGATATACGA+AGG 0.595190 3_4:+554714 Msa0483790:CDS
AGTGGAGTGGATTTGGTGGA+TGG 0.596443 3_4:+554052 Msa0483790:CDS
CTGATTCCGATCAGATGGAT+CGG 0.599712 3_4:-552319 None:intergenic
CAACATGGCTCATTTGGACA+TGG 0.603133 3_4:+553968 Msa0483790:CDS
CGATTGTGCCACGTAGGACG+AGG 0.603186 3_4:-552206 None:intergenic
TTATGATACTGCAGATTGCA+TGG 0.605370 3_4:+553930 Msa0483790:intron
GATATACGAAGGCAACATGC+AGG 0.607469 3_4:+554725 Msa0483790:CDS
TCAAAACACACAAAGATGCT+CGG 0.608069 3_4:-555119 None:intergenic
CCAGTAAGAAGCAAAATCCT+CGG 0.609462 3_4:-552465 None:intergenic
AAAAGAACAACCAGCACAGG+AGG 0.611682 3_4:+552069 Msa0483790:CDS
GGGATACTGAGAGAACAAGT+TGG 0.615463 3_4:+552400 Msa0483790:CDS
AAACCCAGAGAACTGAGAGA+AGG 0.616025 3_4:-551849 None:intergenic
CAGATGGATCGGAATCAGAT+CGG 0.617890 3_4:-552308 None:intergenic
AAGGTTTCAAATTGCAATTG+CGG 0.620617 3_4:+554773 Msa0483790:three_prime_UTR
TGGGCCTTTCGGACCCATGG+GGG 0.628202 3_4:-554258 None:intergenic
GGGAGCATGTGATAGTGGAG+GGG 0.628715 3_4:-551828 None:intergenic
TTTGTGGGGTGTAAGCCTTG+TGG 0.631272 3_4:+554527 Msa0483790:CDS
CATCGTTCTGAGATGTTCCG+AGG 0.635640 3_4:-552236 None:intergenic
CTGATTCCGATCCATCTGAT+CGG 0.638243 3_4:+552313 Msa0483790:CDS
CTCTATGGGTTTAGGCACCG+TGG 0.638565 3_4:+554632 Msa0483790:CDS
TGTTAAGTCCTAAAATCAAG+CGG 0.644756 3_4:+554657 Msa0483790:CDS
GATGCCTTAGTAGCATGGAG+AGG 0.645528 3_4:+554576 Msa0483790:CDS
CTTGGATCGCAATCAACACA+GGG 0.648132 3_4:+554183 Msa0483790:CDS
TATCACACCCTGAAGTGGAG+TGG 0.650624 3_4:+554039 Msa0483790:CDS
GTGATGCTATAGCCAATAGG+TGG 0.656173 3_4:+554952 Msa0483790:three_prime_UTR
GGAAAGTAACATGTTTGGAG+TGG 0.662541 3_4:+554930 Msa0483790:three_prime_UTR
GTTAGTTTCCTCGATGACAG+CGG 0.666536 3_4:-552268 None:intergenic
GTAACAATCCTCGTCCTACG+TGG 0.672440 3_4:+552198 Msa0483790:CDS
GGATTGTTACGAAACCGCAG+AGG 0.680262 3_4:-552185 None:intergenic
CTGAAACATTCACAATGCAG+TGG 0.681363 3_4:+554881 Msa0483790:three_prime_UTR
CGTAACCGTACACTGCCACG+TGG 0.685010 3_4:+552120 Msa0483790:CDS
CATTGAAATTGTGTACAACA+TGG 0.690436 3_4:+553953 Msa0483790:CDS
AATCAGATCGGATCTCAGCG+AGG 0.690802 3_4:-552296 None:intergenic
GAATATAATTTAAAACCACA+AGG 0.692744 3_4:+554909 Msa0483790:three_prime_UTR
TGGCAGTGTACGGTTACGCG+AGG 0.694238 3_4:-552115 None:intergenic
TGATGCATTCTTCACTGACA+TGG 0.695080 3_4:+554079 Msa0483790:CDS
TAATCTCCATAACTCCCACA+AGG 0.704992 3_4:-554542 None:intergenic
TGATGGAGAAGTATCATCCG+GGG 0.714852 3_4:+554471 Msa0483790:CDS
ATGTTCACGACAGAATGTCG+AGG 0.719638 3_4:+555235 Msa0483790:three_prime_UTR
ATAAAGATCACAATCCTCTG+CGG 0.729589 3_4:+552171 Msa0483790:CDS
AAGGCAACATGCAGGCACTG+TGG 0.731966 3_4:+554733 Msa0483790:CDS
GGTTAACGCCGCTGTCATCG+AGG 0.734981 3_4:+552260 Msa0483790:CDS
TAACGCCGATTGTGCCACGT+AGG 0.737361 3_4:-552212 None:intergenic
TCACCAATAGGATTATCACA+CGG 0.770396 3_4:-552501 None:intergenic
CGGAACATCTCAGAACGATG+CGG 0.771788 3_4:+552239 Msa0483790:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTGTTACAAAAATTTA+CGG + chr3_4:553421-553440 Msa0483790:intron 10.0%
!! TTTATGTTTATTAGAGAAAA+TGG - chr3_4:551876-551895 None:intergenic 15.0%
!!! TGTTCTTTTCATTAAAAAAA+TGG + chr3_4:552023-552042 Msa0483790:exon 15.0%
!!! GTTCTTTTCATTAAAAAAAT+GGG + chr3_4:552024-552043 Msa0483790:exon 15.0%
!!! ACATTTCAATTTTTATATGA+TGG + chr3_4:552582-552601 Msa0483790:intron 15.0%
!!! GTTGTTTTTAATAACTATAT+TGG + chr3_4:552826-552845 Msa0483790:intron 15.0%
!!! TATTATTACTTTTCAAGATT+TGG + chr3_4:553031-553050 Msa0483790:intron 15.0%
!!! TTTTTGTTACAAAAATTTAC+GGG + chr3_4:553422-553441 Msa0483790:intron 15.0%
!!! TTAATTTACTTTTTAGGATT+TGG + chr3_4:553466-553485 Msa0483790:intron 15.0%
!! TAATCTTTATATTTACTCAT+GGG - chr3_4:554116-554135 None:intergenic 15.0%
!! ATAATCTTTATATTTACTCA+TGG - chr3_4:554117-554136 None:intergenic 15.0%
!! ATTATAATATGGTTATTCAT+GGG + chr3_4:554132-554151 Msa0483790:CDS 15.0%
!! AAATGTAAAAACTAGAAAGT+CGG + chr3_4:551772-551791 Msa0483790:five_prime_UTR 20.0%
!!! TTATGTTGTTGAATGTTTTT+TGG - chr3_4:552155-552174 None:intergenic 20.0%
!! ATTCAAACTCATAAAAGTTT+CGG - chr3_4:552346-552365 None:intergenic 20.0%
!! TAACAAAATTAGGATATTCA+CGG - chr3_4:552437-552456 None:intergenic 20.0%
!!! TGAATATCCTAATTTTGTTA+AGG + chr3_4:552437-552456 Msa0483790:CDS 20.0%
!!! GAATATCCTAATTTTGTTAA+GGG + chr3_4:552438-552457 Msa0483790:CDS 20.0%
!!! AATATCCTAATTTTGTTAAG+GGG + chr3_4:552439-552458 Msa0483790:CDS 20.0%
!! AATTACTGAATACAAATGTT+TGG + chr3_4:553378-553397 Msa0483790:intron 20.0%
!! GATTATAATATGGTTATTCA+TGG + chr3_4:554131-554150 Msa0483790:CDS 20.0%
!!! GAATATAATTTAAAACCACA+AGG + chr3_4:554909-554928 Msa0483790:three_prime_UTR 20.0%
!! AAGATAAAATTCTTTCATAC+AGG + chr3_4:555034-555053 Msa0483790:three_prime_UTR 20.0%
!! AGAACTTAGAAGTTTGATTT+GGG - chr3_4:551939-551958 None:intergenic 25.0%
! TAGAACTTAGAAGTTTGATT+TGG - chr3_4:551940-551959 None:intergenic 25.0%
! AAAAGATAATGATCACCAAT+AGG - chr3_4:552516-552535 None:intergenic 25.0%
! AGAATAAGATTGATTATTGC+AGG + chr3_4:552547-552566 Msa0483790:CDS 25.0%
!!! CATTACATTTAGTTTGTGTT+TGG + chr3_4:552685-552704 Msa0483790:intron 25.0%
!!! TAGCGGTTAATTTACTTTTT+AGG + chr3_4:553460-553479 Msa0483790:intron 25.0%
!! ACAAAAAATAGCTTTTGCAA+TGG + chr3_4:553534-553553 Msa0483790:intron 25.0%
! CTTTCATCTGTTATTCAAAA+CGG + chr3_4:553777-553796 Msa0483790:intron 25.0%
! ATATTTATTGCTGTCAAAGA+AGG + chr3_4:554364-554383 Msa0483790:CDS 25.0%
! TTTCTATTTGCATGGTTATT+GGG + chr3_4:554421-554440 Msa0483790:CDS 25.0%
!!! AATTGCGGATTTTGATATAA+TGG + chr3_4:554788-554807 Msa0483790:three_prime_UTR 25.0%
!! AATTACTGATTACTCAAACT+CGG - chr3_4:555076-555095 None:intergenic 25.0%
! GAACATTAACATTTCAATTG+TGG - chr3_4:555221-555240 None:intergenic 25.0%
! GTTGTTCATTTTGTTCTTAC+TGG + chr3_4:551733-551752 Msa0483790:five_prime_UTR 30.0%
!! TAGAAGTTTGATTTGGGTTT+GGG - chr3_4:551933-551952 None:intergenic 30.0%
!! TTAGAAGTTTGATTTGGGTT+TGG - chr3_4:551934-551953 None:intergenic 30.0%
TTGAATGAAACTTATGCTCT+TGG + chr3_4:552360-552379 Msa0483790:CDS 30.0%
!! ATAAGTTTTGTGAGACTGTT+CGG - chr3_4:552918-552937 None:intergenic 30.0%
TAAATAAGCCTAATCCAAAC+AGG + chr3_4:552953-552972 Msa0483790:intron 30.0%
AAATAAGCCTAATCCAAACA+GGG + chr3_4:552954-552973 Msa0483790:intron 30.0%
! CCTATAAAAACGAGCTTTAA+AGG - chr3_4:552986-553005 None:intergenic 30.0%
!!! CCTTTAAAGCTCGTTTTTAT+AGG + chr3_4:552983-553002 Msa0483790:intron 30.0%
CTTGACAAATAATGTGTGTT+TGG + chr3_4:553283-553302 Msa0483790:intron 30.0%
TTGCATTTGCATATAGTATG+TGG + chr3_4:553315-553334 Msa0483790:intron 30.0%
ATTTGCATATAGTATGTGGT+TGG + chr3_4:553319-553338 Msa0483790:intron 30.0%
GGTAAATGCTAGTAAATTAG+CGG + chr3_4:553443-553462 Msa0483790:intron 30.0%
! TTTTTGTTCGACAACTCAAT+TGG - chr3_4:553521-553540 None:intergenic 30.0%
ATAAAAGAGCAGAGTAAAGA+TGG - chr3_4:553701-553720 None:intergenic 30.0%
! TAACAGATGAAAGCATAAGA+TGG - chr3_4:553770-553789 None:intergenic 30.0%
CAAATAAGTTTCTTCACTTC+AGG - chr3_4:553823-553842 None:intergenic 30.0%
CATTGAAATTGTGTACAACA+TGG + chr3_4:553953-553972 Msa0483790:CDS 30.0%
GAGAATTCTTTCTATTTGCA+TGG + chr3_4:554413-554432 Msa0483790:CDS 30.0%
CTTTCTATTTGCATGGTTAT+TGG + chr3_4:554420-554439 Msa0483790:CDS 30.0%
AATCAAGTGCTTAAACTCTA+TGG + chr3_4:554617-554636 Msa0483790:CDS 30.0%
ATCAAGTGCTTAAACTCTAT+GGG + chr3_4:554618-554637 Msa0483790:CDS 30.0%
!!! TTTTAGGACTTAACAATCCA+CGG - chr3_4:554652-554671 None:intergenic 30.0%
TGTTAAGTCCTAAAATCAAG+CGG + chr3_4:554657-554676 Msa0483790:CDS 30.0%
!!! GAAACCTTGCTCTAATTTTT+TGG - chr3_4:554761-554780 None:intergenic 30.0%
AAGGTTTCAAATTGCAATTG+CGG + chr3_4:554773-554792 Msa0483790:three_prime_UTR 30.0%
!! CTCTTTTGTTATGTTGTCTT+TGG + chr3_4:554989-555008 Msa0483790:three_prime_UTR 30.0%
GTTGTCTTTGGTAAGTTAAT+CGG + chr3_4:555001-555020 Msa0483790:three_prime_UTR 30.0%
!! TCAAACTCCTGAATTTTAAC+AGG - chr3_4:555157-555176 None:intergenic 30.0%
GTTTGGGTGAGAATTTGATA+GGG - chr3_4:551917-551936 None:intergenic 35.0%
! TGTGTTTTGTGTTTTGTGTG+TGG - chr3_4:551969-551988 None:intergenic 35.0%
!!! TGTGCTGGTTGTTCTTTTTT+GGG - chr3_4:552067-552086 None:intergenic 35.0%
ATAAAGATCACAATCCTCTG+CGG + chr3_4:552171-552190 Msa0483790:CDS 35.0%
TTGGTCCTAAGATCCTTAAT+TGG + chr3_4:552379-552398 Msa0483790:CDS 35.0%
TGGTCCTAAGATCCTTAATT+GGG + chr3_4:552380-552399 Msa0483790:CDS 35.0%
GTATCCCAATTAAGGATCTT+AGG - chr3_4:552387-552406 None:intergenic 35.0%
TTCTCTCAGTATCCCAATTA+AGG - chr3_4:552395-552414 None:intergenic 35.0%
TCACCAATAGGATTATCACA+CGG - chr3_4:552504-552523 None:intergenic 35.0%
CAACTCAGTTTGTGAGTTAA+GGG - chr3_4:553089-553108 None:intergenic 35.0%
! AACTTGATTTTGAACGAGCT+TGG - chr3_4:553240-553259 None:intergenic 35.0%
! ATTGGTGATCTAAGAGTTGA+AGG - chr3_4:553503-553522 None:intergenic 35.0%
TTATGATACTGCAGATTGCA+TGG + chr3_4:553930-553949 Msa0483790:intron 35.0%
!! ATTTTGACGGCAAATCTCAA+AGG + chr3_4:554302-554321 Msa0483790:CDS 35.0%
TGCTTAAACTCTATGGGTTT+AGG + chr3_4:554624-554643 Msa0483790:CDS 35.0%
! AACTGGTCTACAAACTCTAA+AGG - chr3_4:554704-554723 None:intergenic 35.0%
TAGACCAGTTTGATATACGA+AGG + chr3_4:554714-554733 Msa0483790:CDS 35.0%
GGAACCAAAAAATTAGAGCA+AGG + chr3_4:554754-554773 Msa0483790:exon 35.0%
!! CAAACATGTTACTTTCCTTG+TGG - chr3_4:554927-554946 None:intergenic 35.0%
CACAAGGAAAGTAACATGTT+TGG + chr3_4:554925-554944 Msa0483790:three_prime_UTR 35.0%
AAAGTTACATGTCCACCTAT+TGG - chr3_4:554967-554986 None:intergenic 35.0%
TCAAAACACACAAAGATGCT+CGG - chr3_4:555122-555141 None:intergenic 35.0%
TCCATGTCCTGTTAAAATTC+AGG + chr3_4:555147-555166 Msa0483790:three_prime_UTR 35.0%
!! TCCTGAATTTTAACAGGACA+TGG - chr3_4:555151-555170 None:intergenic 35.0%
TATACACACACACACACGTT+CGG + chr3_4:551801-551820 Msa0483790:five_prime_UTR 40.0%
GGTTTGGGTGAGAATTTGAT+AGG - chr3_4:551918-551937 None:intergenic 40.0%
! GTTTTGTGTTTTGTGTGTGG+TGG - chr3_4:551966-551985 None:intergenic 40.0%
!!! CTGTGCTGGTTGTTCTTTTT+TGG - chr3_4:552068-552087 None:intergenic 40.0%
CAAAAAAGAACAACCAGCAC+AGG + chr3_4:552066-552085 Msa0483790:CDS 40.0%
GGCTTCCCCTTAACAAAATT+AGG - chr3_4:552447-552466 None:intergenic 40.0%
CCAGTAAGAAGCAAAATCCT+CGG - chr3_4:552468-552487 None:intergenic 40.0%
ATAGGATTATCACACGGCTT+CGG - chr3_4:552498-552517 None:intergenic 40.0%
AAGCCGTGTGATAATCCTAT+TGG + chr3_4:552498-552517 Msa0483790:CDS 40.0%
TTAAAGGCAAAGTCCCTGTT+TGG - chr3_4:552970-552989 None:intergenic 40.0%
TCAGTTTGTGAGTTAAGGGA+CGG - chr3_4:553085-553104 None:intergenic 40.0%
GCAACTCAGTTTGTGAGTTA+AGG - chr3_4:553090-553109 None:intergenic 40.0%
ACAAATGTTTGGTTGCTGTC+TGG + chr3_4:553389-553408 Msa0483790:intron 40.0%
GCAGAGTAAAGATGGAGTTT+GGG - chr3_4:553693-553712 None:intergenic 40.0%
AGCAGAGTAAAGATGGAGTT+TGG - chr3_4:553694-553713 None:intergenic 40.0%
GCATAAGATGGAAAAGCAGT+AGG - chr3_4:553758-553777 None:intergenic 40.0%
TGTGTACAACATGGCTCATT+TGG + chr3_4:553962-553981 Msa0483790:CDS 40.0%
AACATGAGCCTTCGAATCAT+CGG - chr3_4:554020-554039 None:intergenic 40.0%
TGATGCATTCTTCACTGACA+TGG + chr3_4:554079-554098 Msa0483790:CDS 40.0%
TTCTGCTCGAACAACAAATC+AGG - chr3_4:554161-554180 None:intergenic 40.0%
TGTTGTTCGAGCAGAATTCT+TGG + chr3_4:554165-554184 Msa0483790:CDS 40.0%
!! TTTTGTTTCGCAATTGCCAG+TGG + chr3_4:554210-554229 Msa0483790:CDS 40.0%
! GTTGGATTTGCTTGATGCTT+GGG + chr3_4:554235-554254 Msa0483790:CDS 40.0%
TGCTGTCAAAGAAGGACAAA+TGG + chr3_4:554372-554391 Msa0483790:CDS 40.0%
GTCAAAGAAGGACAAATGGA+TGG + chr3_4:554376-554395 Msa0483790:CDS 40.0%
TATTTGCATGGTTATTGGGC+TGG + chr3_4:554425-554444 Msa0483790:CDS 40.0%
ATTTGCATGGTTATTGGGCT+GGG + chr3_4:554426-554445 Msa0483790:CDS 40.0%
TGATCGGTATGAAGAGATGA+TGG + chr3_4:554454-554473 Msa0483790:CDS 40.0%
!! GATGATGGAGAAGTATCATC+CGG + chr3_4:554469-554488 Msa0483790:CDS 40.0%
!! ATGATGGAGAAGTATCATCC+GGG + chr3_4:554470-554489 Msa0483790:CDS 40.0%
! CCTTTTGTGACGCATTTTGT+GGG + chr3_4:554512-554531 Msa0483790:CDS 40.0%
! CTTTTGTGACGCATTTTGTG+GGG + chr3_4:554513-554532 Msa0483790:CDS 40.0%
TAATCTCCATAACTCCCACA+AGG - chr3_4:554545-554564 None:intergenic 40.0%
! TTCCTGATCCGCTTGATTTT+AGG - chr3_4:554668-554687 None:intergenic 40.0%
GTTGCCTTCGTATATCAAAC+TGG - chr3_4:554721-554740 None:intergenic 40.0%
CACTGCATTGTGAATGTTTC+AGG - chr3_4:554883-554902 None:intergenic 40.0%
CTGAAACATTCACAATGCAG+TGG + chr3_4:554881-554900 Msa0483790:three_prime_UTR 40.0%
GGAAAGTAACATGTTTGGAG+TGG + chr3_4:554930-554949 Msa0483790:three_prime_UTR 40.0%
AACCCAGAGAACTGAGAGAA+GGG - chr3_4:551851-551870 None:intergenic 45.0%
AAACCCAGAGAACTGAGAGA+AGG - chr3_4:551852-551871 None:intergenic 45.0%
AAAAGAACAACCAGCACAGG+AGG + chr3_4:552069-552088 Msa0483790:CDS 45.0%
!! GAGGTTGGTGTTGTTGTTGT+TGG - chr3_4:552099-552118 None:intergenic 45.0%
! GTTAGTTTCCTCGATGACAG+CGG - chr3_4:552271-552290 None:intergenic 45.0%
CAGATGGATCGGAATCAGAT+CGG - chr3_4:552311-552330 None:intergenic 45.0%
CTGATTCCGATCCATCTGAT+CGG + chr3_4:552313-552332 Msa0483790:CDS 45.0%
CTGATTCCGATCAGATGGAT+CGG - chr3_4:552322-552341 None:intergenic 45.0%
GGGATACTGAGAGAACAAGT+TGG + chr3_4:552400-552419 Msa0483790:CDS 45.0%
! ATTTTGTTAAGGGGAAGCCG+AGG + chr3_4:552448-552467 Msa0483790:CDS 45.0%
! CCGAGGATTTTGCTTCTTAC+TGG + chr3_4:552465-552484 Msa0483790:CDS 45.0%
GCAAAGTCCCTGTTTGGATT+AGG - chr3_4:552964-552983 None:intergenic 45.0%
TTTGTGAGTTAAGGGACGGA+AGG - chr3_4:553081-553100 None:intergenic 45.0%
ATGGAGTTTGGGTGAGCAAT+TGG - chr3_4:553682-553701 None:intergenic 45.0%
CAACATGGCTCATTTGGACA+TGG + chr3_4:553968-553987 Msa0483790:CDS 45.0%
CCTTCGAATCATCGGCAATT+TGG - chr3_4:554012-554031 None:intergenic 45.0%
CCAAATTGCCGATGATTCGA+AGG + chr3_4:554009-554028 Msa0483790:CDS 45.0%
CATGTTATCACACCCTGAAG+TGG + chr3_4:554034-554053 Msa0483790:CDS 45.0%
ACCAAATCCACTCCACTTCA+GGG - chr3_4:554049-554068 None:intergenic 45.0%
TCTTGGATCGCAATCAACAC+AGG + chr3_4:554182-554201 Msa0483790:CDS 45.0%
CTTGGATCGCAATCAACACA+GGG + chr3_4:554183-554202 Msa0483790:CDS 45.0%
! CGTTGGATTTGCTTGATGCT+TGG + chr3_4:554234-554253 Msa0483790:CDS 45.0%
TCTTCTCGAATTGGGCCTTT+CGG - chr3_4:554272-554291 None:intergenic 45.0%
! AGAGGCTGGGAAGATTTTGA+CGG + chr3_4:554289-554308 Msa0483790:CDS 45.0%
TGACGGCAAATCTCAAAGGA+AGG + chr3_4:554306-554325 Msa0483790:CDS 45.0%
GAAGGACAAATGGATGGAGA+AGG + chr3_4:554382-554401 Msa0483790:CDS 45.0%
!! TGATGGAGAAGTATCATCCG+GGG + chr3_4:554471-554490 Msa0483790:CDS 45.0%
! GCCTTTTGTGACGCATTTTG+TGG + chr3_4:554511-554530 Msa0483790:CDS 45.0%
CCCACAAAATGCGTCACAAA+AGG - chr3_4:554515-554534 None:intergenic 45.0%
! TGTAAGCCTTGTGGGAGTTA+TGG + chr3_4:554536-554555 Msa0483790:CDS 45.0%
! CTACTAAGGCATCTCTCTAC+TGG - chr3_4:554569-554588 None:intergenic 45.0%
AGAGAGATGCCTTAGTAGCA+TGG + chr3_4:554571-554590 Msa0483790:CDS 45.0%
ATGCCTTAGTAGCATGGAGA+GGG + chr3_4:554577-554596 Msa0483790:CDS 45.0%
! GGAGAGGGCTTTCAATTTTG+CGG + chr3_4:554592-554611 Msa0483790:CDS 45.0%
GTCCTAAAATCAAGCGGATC+AGG + chr3_4:554663-554682 Msa0483790:CDS 45.0%
GATATACGAAGGCAACATGC+AGG + chr3_4:554725-554744 Msa0483790:CDS 45.0%
TAGCGTCGTGACATCAATTG+AGG - chr3_4:554836-554855 None:intergenic 45.0%
! GTGGTGATGCTATAGCCAAT+AGG + chr3_4:554949-554968 Msa0483790:three_prime_UTR 45.0%
GTGATGCTATAGCCAATAGG+TGG + chr3_4:554952-554971 Msa0483790:three_prime_UTR 45.0%
!! CATTTCAATTGTGGTGCTGC+TGG - chr3_4:555212-555231 None:intergenic 45.0%
ATGTTCACGACAGAATGTCG+AGG + chr3_4:555235-555254 Msa0483790:three_prime_UTR 45.0%
!! TAAATATAAAGATTATAATA+TGG + chr3_4:554121-554140 Msa0483790:CDS 5.0%
!! AGGGAGCATGTGATAGTGGA+GGG - chr3_4:551832-551851 None:intergenic 50.0%
!! AAGGGAGCATGTGATAGTGG+AGG - chr3_4:551833-551852 None:intergenic 50.0%
! GAGAAGGGAGCATGTGATAG+TGG - chr3_4:551836-551855 None:intergenic 50.0%
CTCCCTTCTCTCAGTTCTCT+GGG + chr3_4:551846-551865 Msa0483790:five_prime_UTR 50.0%
!! TGTTGGTAATCCTCCTGTGC+TGG - chr3_4:552082-552101 None:intergenic 50.0%
! TTTTGGATCTGACGTCCACG+TGG - chr3_4:552138-552157 None:intergenic 50.0%
GGATTGTTACGAAACCGCAG+AGG - chr3_4:552188-552207 None:intergenic 50.0%
GTAACAATCCTCGTCCTACG+TGG + chr3_4:552198-552217 Msa0483790:CDS 50.0%
!! CATCGTTCTGAGATGTTCCG+AGG - chr3_4:552239-552258 None:intergenic 50.0%
CGGAACATCTCAGAACGATG+CGG + chr3_4:552239-552258 Msa0483790:CDS 50.0%
ATCGGATCTCAGCGAGGATA+CGG - chr3_4:552293-552312 None:intergenic 50.0%
AATCAGATCGGATCTCAGCG+AGG - chr3_4:552299-552318 None:intergenic 50.0%
TCGGTCTGATTCCGATCAGA+TGG - chr3_4:552327-552346 None:intergenic 50.0%
CATTTGGACATGGAGCTTGC+AGG + chr3_4:553978-553997 Msa0483790:CDS 50.0%
ACATGGAGCTTGCAGGTTAC+TGG + chr3_4:553985-554004 Msa0483790:CDS 50.0%
CATGGAGCTTGCAGGTTACT+GGG + chr3_4:553986-554005 Msa0483790:CDS 50.0%
TATCACACCCTGAAGTGGAG+TGG + chr3_4:554039-554058 Msa0483790:CDS 50.0%
! ACCCTGAAGTGGAGTGGATT+TGG + chr3_4:554045-554064 Msa0483790:CDS 50.0%
CACCAAATCCACTCCACTTC+AGG - chr3_4:554050-554069 None:intergenic 50.0%
! CTGAAGTGGAGTGGATTTGG+TGG + chr3_4:554048-554067 Msa0483790:CDS 50.0%
!! AGTGGAGTGGATTTGGTGGA+TGG + chr3_4:554052-554071 Msa0483790:CDS 50.0%
CAAGCAAATCCAACGACCAC+TGG - chr3_4:554229-554248 None:intergenic 50.0%
GAAAGGCCCAATTCGAGAAG+AGG + chr3_4:554271-554290 Msa0483790:CDS 50.0%
TCCCAGCCTCTTCTCGAATT+GGG - chr3_4:554280-554299 None:intergenic 50.0%
TTCCCAGCCTCTTCTCGAAT+TGG - chr3_4:554281-554300 None:intergenic 50.0%
!! ATTGGGCTGGGTTGGTTGAT+CGG + chr3_4:554438-554457 Msa0483790:CDS 50.0%
!! AGAAGTATCATCCGGGGCTA+GGG + chr3_4:554477-554496 Msa0483790:CDS 50.0%
TTTGTGGGGTGTAAGCCTTG+TGG + chr3_4:554527-554546 Msa0483790:CDS 50.0%
! TTGTGGGGTGTAAGCCTTGT+GGG + chr3_4:554528-554547 Msa0483790:CDS 50.0%
GATGCCTTAGTAGCATGGAG+AGG + chr3_4:554576-554595 Msa0483790:CDS 50.0%
AAGCCCTCTCCATGCTACTA+AGG - chr3_4:554583-554602 None:intergenic 50.0%
!! GGGAGCATGTGATAGTGGAG+GGG - chr3_4:551831-551850 None:intergenic 55.0%
GCTCCCTTCTCTCAGTTCTC+TGG + chr3_4:551845-551864 Msa0483790:five_prime_UTR 55.0%
AGTGTACGGTTACGCGAGGT+TGG - chr3_4:552114-552133 None:intergenic 55.0%
CTCGTCCTACGTGGCACAAT+CGG + chr3_4:552207-552226 Msa0483790:CDS 55.0%
! TAACGCCGATTGTGCCACGT+AGG - chr3_4:552215-552234 None:intergenic 55.0%
GGCACAATCGGCGTTAACCT+CGG + chr3_4:552219-552238 Msa0483790:CDS 55.0%
GGATTATCACACGGCTTCGG+AGG - chr3_4:552495-552514 None:intergenic 55.0%
GGATCCTAGACCTCATGACG+AGG + chr3_4:553052-553071 Msa0483790:intron 55.0%
GAGTCCTCGTCATGAGGTCT+AGG - chr3_4:553059-553078 None:intergenic 55.0%
TCGCAATTGCCAGTGGTCGT+TGG + chr3_4:554217-554236 Msa0483790:CDS 55.0%
ATTGGGCCTTTCGGACCCAT+GGG - chr3_4:554263-554282 None:intergenic 55.0%
AATTGGGCCTTTCGGACCCA+TGG - chr3_4:554264-554283 None:intergenic 55.0%
GCCCAATTCGAGAAGAGGCT+GGG + chr3_4:554276-554295 Msa0483790:CDS 55.0%
TGATCATCAGCCTCGAACGC+TGG - chr3_4:554332-554351 None:intergenic 55.0%
! GCATGGTTATTGGGCTGGGT+TGG + chr3_4:554430-554449 Msa0483790:CDS 55.0%
!! GAGAAGTATCATCCGGGGCT+AGG + chr3_4:554476-554495 Msa0483790:CDS 55.0%
! GAAGTATCATCCGGGGCTAG+GGG + chr3_4:554478-554497 Msa0483790:CDS 55.0%
! CTCTATGGGTTTAGGCACCG+TGG + chr3_4:554632-554651 Msa0483790:CDS 55.0%
! AAGGCAACATGCAGGCACTG+TGG + chr3_4:554733-554752 Msa0483790:CDS 55.0%
TGGCAGTGTACGGTTACGCG+AGG - chr3_4:552118-552137 None:intergenic 60.0%
CGTAACCGTACACTGCCACG+TGG + chr3_4:552120-552139 Msa0483790:CDS 60.0%
GACGTCCACGTGGCAGTGTA+CGG - chr3_4:552128-552147 None:intergenic 60.0%
CGATTGTGCCACGTAGGACG+AGG - chr3_4:552209-552228 None:intergenic 60.0%
GGTTAACGCCGCTGTCATCG+AGG + chr3_4:552260-552279 Msa0483790:CDS 60.0%
CGGAAGGAGTCCTCGTCATG+AGG - chr3_4:553065-553084 None:intergenic 60.0%
CTTGATGCTTGGGCCCCCAT+GGG + chr3_4:554245-554264 Msa0483790:CDS 60.0%
TTGGGCCTTTCGGACCCATG+GGG - chr3_4:554262-554281 None:intergenic 60.0%
GGCCCAATTCGAGAAGAGGC+TGG + chr3_4:554275-554294 Msa0483790:CDS 60.0%
CAAAGGAAGGCCAGCGTTCG+AGG + chr3_4:554319-554338 Msa0483790:CDS 60.0%
GCTTGATGCTTGGGCCCCCA+TGG + chr3_4:554244-554263 Msa0483790:CDS 65.0%
TGGGCCTTTCGGACCCATGG+GGG - chr3_4:554261-554280 None:intergenic 65.0%
ATCCGGGGCTAGGGGATGAG+AGG + chr3_4:554486-554505 Msa0483790:CDS 65.0%
CACCTCTCATCCCCTAGCCC+CGG - chr3_4:554491-554510 None:intergenic 65.0%
TGGGCCCCCATGGGTCCGAA+AGG + chr3_4:554254-554273 Msa0483790:CDS 70.0%
CGGGGCTAGGGGATGAGAGG+TGG + chr3_4:554489-554508 Msa0483790:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 551707 555276 551707 ID=Msa0483790;Name=Msa0483790
chr3_4 mRNA 551707 555276 551707 ID=Msa0483790-mRNA-1;Parent=Msa0483790;Name=Msa0483790-mRNA-1;_AED=0.01;_eAED=0.01;_QI=335|1|1|1|1|1|2|507|450
chr3_4 exon 551707 552568 551707 ID=Msa0483790-mRNA-1:exon:129;Parent=Msa0483790-mRNA-1
chr3_4 exon 553944 555276 553944 ID=Msa0483790-mRNA-1:exon:130;Parent=Msa0483790-mRNA-1
chr3_4 five_prime_UTR 551707 552041 551707 ID=Msa0483790-mRNA-1:five_prime_utr;Parent=Msa0483790-mRNA-1
chr3_4 CDS 552042 552568 552042 ID=Msa0483790-mRNA-1:cds;Parent=Msa0483790-mRNA-1
chr3_4 CDS 553944 554769 553944 ID=Msa0483790-mRNA-1:cds;Parent=Msa0483790-mRNA-1
chr3_4 three_prime_UTR 554770 555276 554770 ID=Msa0483790-mRNA-1:three_prime_utr;Parent=Msa0483790-mRNA-1
Gene Sequence

>Msa0483790

ATGGGACAAGAAAACAACTTAACCCAAAAAAGAACAACCAGCACAGGAGGATTACCAACAACAACAACACCAACCTCGCGTAACCGTACACTGCCACGTGGACGTCAGATCCAAAAAACATTCAACAACATAAAGATCACAATCCTCTGCGGTTTCGTAACAATCCTCGTCCTACGTGGCACAATCGGCGTTAACCTCGGAACATCTCAGAACGATGCGGTTAACGCCGCTGTCATCGAGGAAACTAACCGTATCCTCGCTGAGATCCGATCTGATTCCGATCCATCTGATCGGAATCAGACCGAAACTTTTATGAGTTTGAATGAAACTTATGCTCTTGGTCCTAAGATCCTTAATTGGGATACTGAGAGAACAAGTTGGTTAGATAAGAACCGTGAATATCCTAATTTTGTTAAGGGGAAGCCGAGGATTTTGCTTCTTACTGGTTCGCCTCCGAAGCCGTGTGATAATCCTATTGGTGATCATTATCTTTTGAAATCTATCAAGAATAAGATTGATTATTGCAGATTGCATGGCATTGAAATTGTGTACAACATGGCTCATTTGGACATGGAGCTTGCAGGTTACTGGGCCAAATTGCCGATGATTCGAAGGCTCATGTTATCACACCCTGAAGTGGAGTGGATTTGGTGGATGGACAGTGATGCATTCTTCACTGACATGGTGTTTGAGCTTCCCATGAGTAAATATAAAGATTATAATATGGTTATTCATGGGTATCCTGATTTGTTGTTCGAGCAGAATTCTTGGATCGCAATCAACACAGGGAGCTTTTTGTTTCGCAATTGCCAGTGGTCGTTGGATTTGCTTGATGCTTGGGCCCCCATGGGTCCGAAAGGCCCAATTCGAGAAGAGGCTGGGAAGATTTTGACGGCAAATCTCAAAGGAAGGCCAGCGTTCGAGGCTGATGATCAATCAGCGTTGATATATTTATTGCTGTCAAAGAAGGACAAATGGATGGAGAAGGTATTTCTTGAGAATTCTTTCTATTTGCATGGTTATTGGGCTGGGTTGGTTGATCGGTATGAAGAGATGATGGAGAAGTATCATCCGGGGCTAGGGGATGAGAGGTGGCCTTTTGTGACGCATTTTGTGGGGTGTAAGCCTTGTGGGAGTTATGGAGATTATCCAGTAGAGAGATGCCTTAGTAGCATGGAGAGGGCTTTCAATTTTGCGGATAATCAAGTGCTTAAACTCTATGGGTTTAGGCACCGTGGATTGTTAAGTCCTAAAATCAAGCGGATCAGGAACGAGACGATTACTCCTTTAGAGTTTGTAGACCAGTTTGATATACGAAGGCAACATGCAGGCACTGTGGAACCAAAAAATTAG
Protein sequence

>Msa0483790

MGQENNLTQKRTTSTGGLPTTTTPTSRNRTLPRGRQIQKTFNNIKITILCGFVTILVLRGTIGVNLGTSQNDAVNAAVIEETNRILAEIRSDSDPSDRNQTETFMSLNETYALGPKILNWDTERTSWLDKNREYPNFVKGKPRILLLTGSPPKPCDNPIGDHYLLKSIKNKIDYCRLHGIEIVYNMAHLDMELAGYWAKLPMIRRLMLSHPEVEWIWWMDSDAFFTDMVFELPMSKYKDYNMVIHGYPDLLFEQNSWIAINTGSFLFRNCQWSLDLLDAWAPMGPKGPIREEAGKILTANLKGRPAFEADDQSALIYLLLSKKDKWMEKVFLENSFYLHGYWAGLVDRYEEMMEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLSSMERAFNFADNQVLKLYGFRHRGLLSPKIKRIRNETITPLEFVDQFDIRRQHAGTVEPKN*