AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0402190

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0402190 MtrunA17_Chr3g0091621 98.896 453 2 1 1 450 1 453 0.0 932
Msa0402190 MtrunA17_Chr4g0061061 83.850 452 67 4 1 450 1 448 0.0 777
Msa0402190 MtrunA17_Chr7g0269221 57.301 452 156 5 33 447 10 461 0.0 550
Msa0402190 MtrunA17_Chr4g0067341 58.701 431 153 4 33 438 10 440 0.0 543
Msa0402190 MtrunA17_Chr4g0054201 45.430 372 155 7 94 432 522 878 6.88e-107 336
Msa0402190 MtrunA17_Chr4g0054201 45.970 335 141 7 110 409 73 402 1.09e-93 301
Msa0402190 MtrunA17_Chr5g0401011 40.000 425 206 10 29 414 17 431 2.28e-106 322
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0402190 AT5G07720.1 77.024 457 98 3 1 450 1 457 0.0 752
Msa0402190 AT1G74380.1 77.511 458 94 5 1 450 1 457 0.0 727
Msa0402190 AT1G18690.3 65.226 486 102 5 27 445 26 511 0.0 635
Msa0402190 AT1G18690.4 65.226 486 102 5 27 445 26 511 0.0 635
Msa0402190 AT1G18690.2 65.226 486 102 5 27 445 26 511 0.0 635
Msa0402190 AT1G18690.1 65.226 486 102 5 27 445 26 511 0.0 635
Msa0402190 AT3G62720.2 58.257 436 152 5 33 438 10 445 0.0 535
Msa0402190 AT3G62720.1 58.257 436 152 5 33 438 10 445 0.0 535
Msa0402190 AT4G02500.1 58.581 437 150 5 33 438 10 446 0.0 526
Msa0402190 AT2G22900.1 41.176 374 173 8 80 414 66 431 4.41e-95 294
Msa0402190 AT4G37690.1 41.570 344 157 5 110 414 76 414 5.43e-95 293
Msa0402190 AT4G38310.1 45.192 104 52 3 110 211 17 117 5.57e-24 97.1

Find 161 sgRNAs with CRISPR-Local

Find 234 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTATGTTTATTAGAGAAAA+TGG 0.172631 3_2:+30110694 None:intergenic
GGTTTCCCCTTAACAAAATT+AGG 0.210983 3_2:+30110123 None:intergenic
CTTTCTATTTGCATGGTTAT+TGG 0.211134 3_2:-30108160 Msa0402190:CDS
ACATGGAGCTTGCAGGTTAC+TGG 0.215014 3_2:-30108595 Msa0402190:CDS
AATCAAGTGCTTAAACTCTA+TGG 0.218743 3_2:-30107963 Msa0402190:CDS
TTTCTATTTGCATGGTTATT+GGG 0.219207 3_2:-30108159 Msa0402190:CDS
CACTGCATTGTGAATGTTTC+AGG 0.238943 3_2:+30107700 None:intergenic
CCTTCGAATCATCGGCAATT+TGG 0.239100 3_2:+30108571 None:intergenic
GCTCCCTTCTCTCAGTTCTC+TGG 0.239364 3_2:-30110722 Msa0402190:five_prime_UTR
TTCTCTCAGTATCCCAATTA+AGG 0.247028 3_2:+30110175 None:intergenic
TCCATGTCCTGTTAAAATTC+AGG 0.256565 3_2:-30107433 Msa0402190:three_prime_UTR
TTGGTCCTAAGATCCTTAAT+TGG 0.264667 3_2:-30110188 Msa0402190:CDS
ACCAGTAAGAAGCAAAATTC+TGG 0.285328 3_2:+30110101 None:intergenic
TTCCCAGCCTCTTCTCGAAT+TGG 0.291305 3_2:+30108302 None:intergenic
CACCAAATCCACTCCACTTC+AGG 0.295318 3_2:+30108533 None:intergenic
TAGAAGTTTGATTTGGGTTT+GGG 0.308850 3_2:+30110637 None:intergenic
TGTTGTTCGAGCAGAATTCT+TGG 0.311777 3_2:-30108415 Msa0402190:CDS
GTTGTCTTTGGTAAGTTAAT+CGG 0.311893 3_2:-30107579 Msa0402190:three_prime_UTR
CTCCCTTCTCTCAGTTCTCT+GGG 0.314206 3_2:-30110721 Msa0402190:five_prime_UTR
TAGAACTTAGAAGTTTGATT+TGG 0.315370 3_2:+30110630 None:intergenic
CGTTGGATTTGCTTGATGCT+TGG 0.318309 3_2:-30108346 Msa0402190:CDS
GTATCCCAATTAAGGATCTT+AGG 0.329038 3_2:+30110183 None:intergenic
TATTTGCATGGTTATTGGGC+TGG 0.334350 3_2:-30108155 Msa0402190:CDS
AGAATAAGATTGATTATTGC+AGG 0.335344 3_2:-30110020 Msa0402190:intron
ATTCAAACTCATAAAAGTTT+CGG 0.342769 3_2:+30110224 None:intergenic
AGAACTTAGAAGTTTGATTT+GGG 0.353231 3_2:+30110631 None:intergenic
TCCCAGCCTCTTCTCGAATT+GGG 0.354694 3_2:+30108303 None:intergenic
GGTTTGGGTGAGAATTTGAT+AGG 0.362109 3_2:+30110652 None:intergenic
CACTTGGACATGGAGCTTGC+AGG 0.363992 3_2:-30108602 Msa0402190:CDS
GTTGGATTTGCTTGATGCTT+GGG 0.365810 3_2:-30108345 Msa0402190:CDS
GATTATAATATGGTTATTCA+TGG 0.367610 3_2:-30108449 Msa0402190:CDS
TTAGAAGTTTGATTTGGGTT+TGG 0.374969 3_2:+30110636 None:intergenic
TAAATATAAAGATTATAATA+TGG 0.375741 3_2:-30108459 Msa0402190:CDS
TTGAATGAAACTTATGCTCT+TGG 0.381407 3_2:-30110207 Msa0402190:CDS
AAAAGATAATGATCACCAAT+AGG 0.391177 3_2:+30110054 None:intergenic
TCTTCTCGAATTGGGCCTTT+CGG 0.392147 3_2:+30108311 None:intergenic
AATTGGGCCTTTCGGACCCA+TGG 0.393150 3_2:+30108319 None:intergenic
TGCTTAAACTCTATGGGTTT+AGG 0.393742 3_2:-30107956 Msa0402190:CDS
ACCCTGAAGTGGAGTGGATT+TGG 0.394154 3_2:-30108535 Msa0402190:CDS
GAGAAGTATCATCCGGGGCT+AGG 0.395034 3_2:-30108104 Msa0402190:CDS
ATTGGGCTGGGTTGGTTGAT+CGG 0.403121 3_2:-30108142 Msa0402190:CDS
GTCCTAAAATCAAGCGGATC+AGG 0.412056 3_2:-30107917 Msa0402190:CDS
TTGTGGGGTGTAAGCCTTGT+GGG 0.414516 3_2:-30108052 Msa0402190:CDS
CTACTAAGGCATCTCTCTAC+TGG 0.417101 3_2:+30108014 None:intergenic
TGTAAGCCTTGTGGGAGTTA+TGG 0.420456 3_2:-30108044 Msa0402190:CDS
AAAGTTACATGTCCACCTAT+TGG 0.421549 3_2:+30107616 None:intergenic
AAGATAAAATTCTTTCATAC+AGG 0.426666 3_2:-30107546 Msa0402190:three_prime_UTR
ATAGGATTATCACACGGTTT+CGG 0.428352 3_2:+30110072 None:intergenic
CACAAGGAAAGTAACATGTT+TGG 0.429461 3_2:-30107655 Msa0402190:three_prime_UTR
CATGGAGCTTGCAGGTTACT+GGG 0.431346 3_2:-30108594 Msa0402190:CDS
AGAAGTATCATCCGGGGCTA+GGG 0.432077 3_2:-30108103 Msa0402190:CDS
GAGAAGGGAGCATGTGATAG+TGG 0.436514 3_2:+30110734 None:intergenic
TGCTGTCAAAGAAGGACAAA+TGG 0.438378 3_2:-30108208 Msa0402190:CDS
CTCGTCCTACGTGGCACAAT+CGG 0.441138 3_2:-30110360 Msa0402190:CDS
ATTTGCATGGTTATTGGGCT+GGG 0.441189 3_2:-30108154 Msa0402190:CDS
AAACCGTGTGATAATCCTAT+TGG 0.442105 3_2:-30110069 Msa0402190:CDS
TGGTCCTAAGATCCTTAATT+GGG 0.442563 3_2:-30110187 Msa0402190:CDS
TGTTGGTAATCCTCCTGTGC+TGG 0.443020 3_2:+30110488 None:intergenic
ATTGGGCCTTTCGGACCCAT+GGG 0.445046 3_2:+30108320 None:intergenic
GAGGTTGGTGTTGTTGTTGT+TGG 0.447220 3_2:+30110471 None:intergenic
TTCTGCTCGAACAACAAATC+AGG 0.448355 3_2:+30108422 None:intergenic
CAAAGGAAGGCCAGCGTTCG+AGG 0.448528 3_2:-30108261 Msa0402190:CDS
ATCGGATCTCAGCGAGGATA+CGG 0.453679 3_2:+30110277 None:intergenic
CATTTCAATTGTGGTGCTGC+TGG 0.457783 3_2:+30107371 None:intergenic
GCATGGTTATTGGGCTGGGT+TGG 0.459215 3_2:-30108150 Msa0402190:CDS
ATATTTATTGCTGTCAAAGA+AGG 0.460969 3_2:-30108216 Msa0402190:CDS
CCAGTAAGAAGCAAAATTCT+GGG 0.461505 3_2:+30110102 None:intergenic
TGTGTACAACATGGCTCACT+TGG 0.467982 3_2:-30108618 Msa0402190:CDS
CCCACAAAATGCGTCACAAA+AGG 0.477497 3_2:+30108068 None:intergenic
GTTGCCTTCGTATATCAAAC+TGG 0.478121 3_2:+30107862 None:intergenic
TAACAAAATTAGGATATTCA+CGG 0.478655 3_2:+30110133 None:intergenic
ATAATCTTTATATTTACTCA+TGG 0.485294 3_2:+30108466 None:intergenic
ATCAAGTGCTTAAACTCTAT+GGG 0.487154 3_2:-30107962 Msa0402190:CDS
GAGAATTCTTTCTATTTGCA+TGG 0.494521 3_2:-30108167 Msa0402190:CDS
AAGCCCTCTCCATGCTACTA+AGG 0.496820 3_2:+30108000 None:intergenic
GGCCCAATTCGAGAAGAGGC+TGG 0.499495 3_2:-30108305 Msa0402190:CDS
TGATCATCAGCCTCGAACGC+TGG 0.500069 3_2:+30108251 None:intergenic
AGGGAGCATGTGATAGTGGA+GGG 0.500381 3_2:+30110738 None:intergenic
ACCAAATCCACTCCACTTCA+GGG 0.502114 3_2:+30108534 None:intergenic
TCGCAATTGCCAGTGGTCGT+TGG 0.510685 3_2:-30108363 Msa0402190:CDS
GAACATTAACATTTCAATTG+TGG 0.516142 3_2:+30107362 None:intergenic
CACCTCTCATCCCCTAGCCC+CGG 0.519476 3_2:+30108092 None:intergenic
GATGATGGAGAAGTATCATC+CGG 0.521609 3_2:-30108111 Msa0402190:CDS
GTTTGGGTGAGAATTTGATA+GGG 0.526486 3_2:+30110653 None:intergenic
TCGGTCTGATTCCGATCAGA+TGG 0.529115 3_2:+30110243 None:intergenic
CAAGCAAATCCAACGACCAC+TGG 0.529363 3_2:+30108354 None:intergenic
CGGGGCTAGGGGATGAGAGG+TGG 0.529526 3_2:-30108091 Msa0402190:CDS
AACATGAGCCTTCGAATCAT+CGG 0.529996 3_2:+30108563 None:intergenic
AAGGGAGCATGTGATAGTGG+AGG 0.532628 3_2:+30110737 None:intergenic
TAATCTTTATATTTACTCAT+GGG 0.532867 3_2:+30108467 None:intergenic
CCAAATTGCCGATGATTCGA+AGG 0.538068 3_2:-30108571 Msa0402190:CDS
AACTGGTCTACAAACTCTAA+AGG 0.539086 3_2:+30107879 None:intergenic
GAAGTATCATCCGGGGCTAG+GGG 0.539735 3_2:-30108102 Msa0402190:CDS
GACGTCCACGTGGCAGTGTA+CGG 0.545246 3_2:+30110442 None:intergenic
AACCCAGAGAACTGAGAGAA+GGG 0.545391 3_2:+30110719 None:intergenic
AGTGTACGGTTACGCGAGGT+TGG 0.545877 3_2:+30110456 None:intergenic
ATTATAATATGGTTATTCAT+GGG 0.546527 3_2:-30108448 Msa0402190:CDS
AGAGAGATGCCTTAGTAGCA+TGG 0.561542 3_2:-30108009 Msa0402190:CDS
CAAACATGTTACTTTCCTTG+TGG 0.562501 3_2:+30107656 None:intergenic
GCCCAATTCGAGAAGAGGCT+GGG 0.564968 3_2:-30108304 Msa0402190:CDS
GGATTATCACACGGTTTCGG+AGG 0.569607 3_2:+30110075 None:intergenic
GTCAAAGAAGGACAAATGGA+TGG 0.573047 3_2:-30108204 Msa0402190:CDS
GGCACAATCGGCGTTAACCT+CGG 0.573140 3_2:-30110348 Msa0402190:CDS
TCTTGGATCGCAATCAACAC+AGG 0.574658 3_2:-30108398 Msa0402190:CDS
TGATCGGTATGAAGAGATGA+TGG 0.577526 3_2:-30108126 Msa0402190:CDS
CATGTTATCACACCCTGAAG+TGG 0.577774 3_2:-30108546 Msa0402190:CDS
GTGGTGATGCTATAGCCAAT+AGG 0.579299 3_2:-30107631 Msa0402190:three_prime_UTR
CTGAAGTGGAGTGGATTTGG+TGG 0.580330 3_2:-30108532 Msa0402190:CDS
CAACATGGCTCACTTGGACA+TGG 0.584694 3_2:-30108612 Msa0402190:CDS
TTGGGCCTTTCGGACCCATG+GGG 0.585320 3_2:+30108321 None:intergenic
ATCCGGGGCTAGGGGATGAG+AGG 0.586128 3_2:-30108094 Msa0402190:CDS
AATTACTGATTACTCAAACT+CGG 0.590025 3_2:+30107507 None:intergenic
GAAGGACAAATGGATGGAGA+AGG 0.593298 3_2:-30108198 Msa0402190:CDS
ATGCCTTAGTAGCATGGAGA+GGG 0.593651 3_2:-30108003 Msa0402190:CDS
TGACGGCAAATCTCAAAGGA+AGG 0.593858 3_2:-30108274 Msa0402190:CDS
TAGCGTCGTGACATCAATTG+AGG 0.594255 3_2:+30107747 None:intergenic
GAAAGGCCCAATTCGAGAAG+AGG 0.594485 3_2:-30108309 Msa0402190:CDS
ATGATGGAGAAGTATCATCC+GGG 0.594919 3_2:-30108110 Msa0402190:CDS
TAGACCAGTTTGATATACGA+AGG 0.595190 3_2:-30107866 Msa0402190:CDS
AGTGGAGTGGATTTGGTGGA+TGG 0.596443 3_2:-30108528 Msa0402190:CDS
CTGATTCCGATCAGATGGAT+CGG 0.599712 3_2:+30110248 None:intergenic
CGATTGTGCCACGTAGGACG+AGG 0.603186 3_2:+30110361 None:intergenic
TTATGATACTGCAGATTGCA+TGG 0.605370 3_2:-30108650 Msa0402190:intron
GATATACGAAGGCAACATGC+AGG 0.607469 3_2:-30107855 Msa0402190:CDS
TCAAAACACACAAAGATGCT+CGG 0.608069 3_2:+30107461 None:intergenic
AAAAGAACAACCAGCACAGG+AGG 0.611682 3_2:-30110498 Msa0402190:CDS
GGGATACTGAGAGAACAAGT+TGG 0.615463 3_2:-30110167 Msa0402190:CDS
AAACCCAGAGAACTGAGAGA+AGG 0.616025 3_2:+30110718 None:intergenic
CAGATGGATCGGAATCAGAT+CGG 0.617890 3_2:+30110259 None:intergenic
AAGGTTTCAAATTGCAATTG+CGG 0.620617 3_2:-30107807 Msa0402190:three_prime_UTR
TGGGCCTTTCGGACCCATGG+GGG 0.628202 3_2:+30108322 None:intergenic
GGGAGCATGTGATAGTGGAG+GGG 0.628715 3_2:+30110739 None:intergenic
TTTGTGGGGTGTAAGCCTTG+TGG 0.631272 3_2:-30108053 Msa0402190:CDS
CATCGTTCTGAGATGTTCCG+AGG 0.635640 3_2:+30110331 None:intergenic
CTGATTCCGATCCATCTGAT+CGG 0.638243 3_2:-30110254 Msa0402190:CDS
CTCTATGGGTTTAGGCACCG+TGG 0.638565 3_2:-30107948 Msa0402190:CDS
TGTTAAGTCCTAAAATCAAG+CGG 0.644756 3_2:-30107923 Msa0402190:CDS
GATGCCTTAGTAGCATGGAG+AGG 0.645528 3_2:-30108004 Msa0402190:CDS
CTTGGATCGCAATCAACACA+GGG 0.648132 3_2:-30108397 Msa0402190:CDS
TATCACACCCTGAAGTGGAG+TGG 0.650624 3_2:-30108541 Msa0402190:CDS
GTGATGCTATAGCCAATAGG+TGG 0.656173 3_2:-30107628 Msa0402190:three_prime_UTR
GGAAAGTAACATGTTTGGAG+TGG 0.662541 3_2:-30107650 Msa0402190:three_prime_UTR
GTTAGTTTCCTCGATGACAG+CGG 0.666536 3_2:+30110299 None:intergenic
GTAACAATCCTCGTCCTACG+TGG 0.672440 3_2:-30110369 Msa0402190:CDS
GGATTGTTACGAAACCGCAG+AGG 0.680262 3_2:+30110382 None:intergenic
CTGAAACATTCACAATGCAG+TGG 0.681363 3_2:-30107699 Msa0402190:three_prime_UTR
CGTAACCGTACACTGCCACG+TGG 0.685010 3_2:-30110447 Msa0402190:CDS
CATTGAAATTGTGTACAACA+TGG 0.690436 3_2:-30108627 Msa0402190:CDS
AATCAGATCGGATCTCAGCG+AGG 0.690802 3_2:+30110271 None:intergenic
GAATATAATTTAAAACCACA+AGG 0.692744 3_2:-30107671 Msa0402190:three_prime_UTR
TGGCAGTGTACGGTTACGCG+AGG 0.694238 3_2:+30110452 None:intergenic
TGATGCATTCTTCACTGACA+TGG 0.695080 3_2:-30108501 Msa0402190:CDS
TAATCTCCATAACTCCCACA+AGG 0.704992 3_2:+30108038 None:intergenic
TGATGGAGAAGTATCATCCG+GGG 0.714852 3_2:-30108109 Msa0402190:CDS
ATGTTCACGACAGAATGTCG+AGG 0.719638 3_2:-30107345 Msa0402190:three_prime_UTR
ATAAAGATCACAATCCTCTG+CGG 0.729589 3_2:-30110396 Msa0402190:CDS
AAGGCAACATGCAGGCACTG+TGG 0.731966 3_2:-30107847 Msa0402190:CDS
GGTTAACGCCGCTGTCATCG+AGG 0.734981 3_2:-30110307 Msa0402190:CDS
TAACGCCGATTGTGCCACGT+AGG 0.737361 3_2:+30110355 None:intergenic
TCACCAATAGGATTATCACA+CGG 0.755282 3_2:+30110066 None:intergenic
CGGAACATCTCAGAACGATG+CGG 0.771788 3_2:-30110328 Msa0402190:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTGTTACAAAAATTTA+CGG - chr3_2:30109027-30109046 Msa0402190:intron 10.0%
!! TTTATGTTTATTAGAGAAAA+TGG + chr3_2:30107495-30107514 None:intergenic 15.0%
!!! TGTTCTTTTCATTAAAAAAA+TGG - chr3_2:30107642-30107661 Msa0402190:three_prime_UTR 15.0%
!!! GTTCTTTTCATTAAAAAAAT+GGG - chr3_2:30107643-30107662 Msa0402190:three_prime_UTR 15.0%
!!! TGTTTTTATATAAGCTATAT+TGG - chr3_2:30108432-30108451 Msa0402190:CDS 15.0%
!!! TATTATTACTTTTCAAGATT+TGG - chr3_2:30108637-30108656 Msa0402190:CDS 15.0%
!!! TTTTTGTTACAAAAATTTAC+GGG - chr3_2:30109028-30109047 Msa0402190:intron 15.0%
!!! TTAATTTACTTTTTAGGATT+TGG - chr3_2:30109072-30109091 Msa0402190:intron 15.0%
!! TAATCTTTATATTTACTCAT+GGG + chr3_2:30109722-30109741 None:intergenic 15.0%
!! ATAATCTTTATATTTACTCA+TGG + chr3_2:30109723-30109742 None:intergenic 15.0%
!! ATTATAATATGGTTATTCAT+GGG - chr3_2:30109738-30109757 Msa0402190:intron 15.0%
!! AAATGTAAAAACTAGAAAGT+CGG - chr3_2:30107391-30107410 Msa0402190:three_prime_UTR 20.0%
!!! TTATGTTGTTGAATGTTTTT+TGG + chr3_2:30107774-30107793 None:intergenic 20.0%
!! ATTCAAACTCATAAAAGTTT+CGG + chr3_2:30107965-30107984 None:intergenic 20.0%
!! TAACAAAATTAGGATATTCA+CGG + chr3_2:30108056-30108075 None:intergenic 20.0%
!!! TGAATATCCTAATTTTGTTA+AGG - chr3_2:30108056-30108075 Msa0402190:CDS 20.0%
!!! GAATATCCTAATTTTGTTAA+GGG - chr3_2:30108057-30108076 Msa0402190:CDS 20.0%
!!! AATATCCTAATTTTGTTAAG+GGG - chr3_2:30108058-30108077 Msa0402190:CDS 20.0%
!! AATTACTGAATACAAATGTT+TGG - chr3_2:30108984-30109003 Msa0402190:intron 20.0%
!! GATTATAATATGGTTATTCA+TGG - chr3_2:30109737-30109756 Msa0402190:intron 20.0%
!!! GAATATAATTTAAAACCACA+AGG - chr3_2:30110515-30110534 Msa0402190:CDS 20.0%
!! AAGATAAAATTCTTTCATAC+AGG - chr3_2:30110640-30110659 Msa0402190:five_prime_UTR 20.0%
!! AGAACTTAGAAGTTTGATTT+GGG + chr3_2:30107558-30107577 None:intergenic 25.0%
! TAGAACTTAGAAGTTTGATT+TGG + chr3_2:30107559-30107578 None:intergenic 25.0%
! AAAAGATAATGATCACCAAT+AGG + chr3_2:30108135-30108154 None:intergenic 25.0%
! AGAATAAGATTGATTATTGC+AGG - chr3_2:30108166-30108185 Msa0402190:CDS 25.0%
!! CCTATAAAAATGAGCTTTAA+AGG + chr3_2:30108592-30108611 None:intergenic 25.0%
!!! CCTTTAAAGCTCATTTTTAT+AGG - chr3_2:30108589-30108608 Msa0402190:CDS 25.0%
! GGTAAATGTTAGTAAATTAG+CGG - chr3_2:30109049-30109068 Msa0402190:intron 25.0%
!!! TAGCGGTTAATTTACTTTTT+AGG - chr3_2:30109066-30109085 Msa0402190:intron 25.0%
!! ACAAAAAATAGCTTTTGCAA+TGG - chr3_2:30109140-30109159 Msa0402190:intron 25.0%
! CTTTCATCTGTTATTCAAAA+CGG - chr3_2:30109383-30109402 Msa0402190:intron 25.0%
! ATATTTATTGCTGTCAAAGA+AGG - chr3_2:30109970-30109989 Msa0402190:intron 25.0%
! TTTCTATTTGCATGGTTATT+GGG - chr3_2:30110027-30110046 Msa0402190:CDS 25.0%
!!! AATTGCGGATTTTGATATAA+TGG - chr3_2:30110394-30110413 Msa0402190:CDS 25.0%
!! AATTACTGATTACTCAAACT+CGG + chr3_2:30110682-30110701 None:intergenic 25.0%
! GAACATTAACATTTCAATTG+TGG + chr3_2:30110827-30110846 None:intergenic 25.0%
! GTTGTTCATTTTGTTCTTAC+TGG - chr3_2:30107352-30107371 Msa0402190:three_prime_UTR 30.0%
!! TAGAAGTTTGATTTGGGTTT+GGG + chr3_2:30107552-30107571 None:intergenic 30.0%
!! TTAGAAGTTTGATTTGGGTT+TGG + chr3_2:30107553-30107572 None:intergenic 30.0%
TTGAATGAAACTTATGCTCT+TGG - chr3_2:30107979-30107998 Msa0402190:CDS 30.0%
!! CAGTACATTTAGTTTGTGTT+TGG - chr3_2:30108289-30108308 Msa0402190:CDS 30.0%
!! ATAAGTTTTGTGAGACTGTT+CGG + chr3_2:30108524-30108543 None:intergenic 30.0%
TAAATAAGCCTAATCCAAAC+AGG - chr3_2:30108559-30108578 Msa0402190:CDS 30.0%
AAATAAGCCTAATCCAAACA+GGG - chr3_2:30108560-30108579 Msa0402190:CDS 30.0%
CTTGACAAATAATGTGTGTT+TGG - chr3_2:30108889-30108908 Msa0402190:intron 30.0%
TTGCATTTGCATATAGTATG+TGG - chr3_2:30108921-30108940 Msa0402190:intron 30.0%
ATTTGCATATAGTATGTGGT+TGG - chr3_2:30108925-30108944 Msa0402190:intron 30.0%
! TTTTTGTTCGACAACTCAAT+TGG + chr3_2:30109127-30109146 None:intergenic 30.0%
ATAAAAGAGCAGAGTAAAGA+TGG + chr3_2:30109307-30109326 None:intergenic 30.0%
! TAACAGATGAAAGCATAAGA+TGG + chr3_2:30109376-30109395 None:intergenic 30.0%
CAAATAAGTTTCTTCACTTC+AGG + chr3_2:30109429-30109448 None:intergenic 30.0%
CATTGAAATTGTGTACAACA+TGG - chr3_2:30109559-30109578 Msa0402190:intron 30.0%
GAGAATTCTTTCTATTTGCA+TGG - chr3_2:30110019-30110038 Msa0402190:intron 30.0%
CTTTCTATTTGCATGGTTAT+TGG - chr3_2:30110026-30110045 Msa0402190:CDS 30.0%
AATCAAGTGCTTAAACTCTA+TGG - chr3_2:30110223-30110242 Msa0402190:CDS 30.0%
ATCAAGTGCTTAAACTCTAT+GGG - chr3_2:30110224-30110243 Msa0402190:CDS 30.0%
!!! TTTTAGGACTTAACAATCCA+CGG + chr3_2:30110258-30110277 None:intergenic 30.0%
TGTTAAGTCCTAAAATCAAG+CGG - chr3_2:30110263-30110282 Msa0402190:CDS 30.0%
!!! GAAACCTTGCTCTAATTTTT+TGG + chr3_2:30110367-30110386 None:intergenic 30.0%
AAGGTTTCAAATTGCAATTG+CGG - chr3_2:30110379-30110398 Msa0402190:CDS 30.0%
!! CTCTTTTGTTATGTTGTCTT+TGG - chr3_2:30110595-30110614 Msa0402190:five_prime_UTR 30.0%
GTTGTCTTTGGTAAGTTAAT+CGG - chr3_2:30110607-30110626 Msa0402190:five_prime_UTR 30.0%
!! TCAAACTCCTGAATTTTAAC+AGG + chr3_2:30110763-30110782 None:intergenic 30.0%
GTTTGGGTGAGAATTTGATA+GGG + chr3_2:30107536-30107555 None:intergenic 35.0%
! TGTGTTTTGTGTTTTGTGTG+TGG + chr3_2:30107588-30107607 None:intergenic 35.0%
!!! TGTGCTGGTTGTTCTTTTTT+GGG + chr3_2:30107686-30107705 None:intergenic 35.0%
ATAAAGATCACAATCCTCTG+CGG - chr3_2:30107790-30107809 Msa0402190:three_prime_UTR 35.0%
TTGGTCCTAAGATCCTTAAT+TGG - chr3_2:30107998-30108017 Msa0402190:CDS 35.0%
TGGTCCTAAGATCCTTAATT+GGG - chr3_2:30107999-30108018 Msa0402190:CDS 35.0%
GTATCCCAATTAAGGATCTT+AGG + chr3_2:30108006-30108025 None:intergenic 35.0%
TTCTCTCAGTATCCCAATTA+AGG + chr3_2:30108014-30108033 None:intergenic 35.0%
GGTTTCCCCTTAACAAAATT+AGG + chr3_2:30108066-30108085 None:intergenic 35.0%
CCAGTAAGAAGCAAAATTCT+GGG + chr3_2:30108087-30108106 None:intergenic 35.0%
ACCAGTAAGAAGCAAAATTC+TGG + chr3_2:30108088-30108107 None:intergenic 35.0%
ATAGGATTATCACACGGTTT+CGG + chr3_2:30108117-30108136 None:intergenic 35.0%
AAACCGTGTGATAATCCTAT+TGG - chr3_2:30108117-30108136 Msa0402190:CDS 35.0%
TCACCAATAGGATTATCACA+CGG + chr3_2:30108123-30108142 None:intergenic 35.0%
CAACTCAGTTTGTGAGTTAA+GGG + chr3_2:30108695-30108714 None:intergenic 35.0%
! AACTTGATTTTGAACGAGCT+TGG + chr3_2:30108846-30108865 None:intergenic 35.0%
! ATTGGTGATCTAAGAGTTGA+AGG + chr3_2:30109109-30109128 None:intergenic 35.0%
TTATGATACTGCAGATTGCA+TGG - chr3_2:30109536-30109555 Msa0402190:intron 35.0%
!! ATTTTGACGGCAAATCTCAA+AGG - chr3_2:30109908-30109927 Msa0402190:intron 35.0%
TGCTTAAACTCTATGGGTTT+AGG - chr3_2:30110230-30110249 Msa0402190:CDS 35.0%
! AACTGGTCTACAAACTCTAA+AGG + chr3_2:30110310-30110329 None:intergenic 35.0%
TAGACCAGTTTGATATACGA+AGG - chr3_2:30110320-30110339 Msa0402190:CDS 35.0%
GGAACCAAAAAATTAGAGCA+AGG - chr3_2:30110360-30110379 Msa0402190:CDS 35.0%
!! CAAACATGTTACTTTCCTTG+TGG + chr3_2:30110533-30110552 None:intergenic 35.0%
CACAAGGAAAGTAACATGTT+TGG - chr3_2:30110531-30110550 Msa0402190:exon 35.0%
AAAGTTACATGTCCACCTAT+TGG + chr3_2:30110573-30110592 None:intergenic 35.0%
TCAAAACACACAAAGATGCT+CGG + chr3_2:30110728-30110747 None:intergenic 35.0%
TCCATGTCCTGTTAAAATTC+AGG - chr3_2:30110753-30110772 Msa0402190:five_prime_UTR 35.0%
!! TCCTGAATTTTAACAGGACA+TGG + chr3_2:30110757-30110776 None:intergenic 35.0%
TATACACACACACACACGTT+CGG - chr3_2:30107420-30107439 Msa0402190:three_prime_UTR 40.0%
GGTTTGGGTGAGAATTTGAT+AGG + chr3_2:30107537-30107556 None:intergenic 40.0%
! GTTTTGTGTTTTGTGTGTGG+TGG + chr3_2:30107585-30107604 None:intergenic 40.0%
!!! CTGTGCTGGTTGTTCTTTTT+TGG + chr3_2:30107687-30107706 None:intergenic 40.0%
CAAAAAAGAACAACCAGCAC+AGG - chr3_2:30107685-30107704 Msa0402190:three_prime_UTR 40.0%
! CCCAGAATTTTGCTTCTTAC+TGG - chr3_2:30108084-30108103 Msa0402190:CDS 40.0%
TTAAAGGCAAAGTCCCTGTT+TGG + chr3_2:30108576-30108595 None:intergenic 40.0%
TCAGTTTGTGAGTTAAGGGA+CGG + chr3_2:30108691-30108710 None:intergenic 40.0%
GCAACTCAGTTTGTGAGTTA+AGG + chr3_2:30108696-30108715 None:intergenic 40.0%
ACAAATGTTTGGTTGCTGTC+TGG - chr3_2:30108995-30109014 Msa0402190:intron 40.0%
GCAGAGTAAAGATGGAGTTT+GGG + chr3_2:30109299-30109318 None:intergenic 40.0%
AGCAGAGTAAAGATGGAGTT+TGG + chr3_2:30109300-30109319 None:intergenic 40.0%
GCATAAGATGGAAAAGCAGT+AGG + chr3_2:30109364-30109383 None:intergenic 40.0%
AACATGAGCCTTCGAATCAT+CGG + chr3_2:30109626-30109645 None:intergenic 40.0%
TGATGCATTCTTCACTGACA+TGG - chr3_2:30109685-30109704 Msa0402190:intron 40.0%
TTCTGCTCGAACAACAAATC+AGG + chr3_2:30109767-30109786 None:intergenic 40.0%
TGTTGTTCGAGCAGAATTCT+TGG - chr3_2:30109771-30109790 Msa0402190:intron 40.0%
!! TTTTGTTTCGCAATTGCCAG+TGG - chr3_2:30109816-30109835 Msa0402190:intron 40.0%
! GTTGGATTTGCTTGATGCTT+GGG - chr3_2:30109841-30109860 Msa0402190:intron 40.0%
TGCTGTCAAAGAAGGACAAA+TGG - chr3_2:30109978-30109997 Msa0402190:intron 40.0%
GTCAAAGAAGGACAAATGGA+TGG - chr3_2:30109982-30110001 Msa0402190:intron 40.0%
TATTTGCATGGTTATTGGGC+TGG - chr3_2:30110031-30110050 Msa0402190:CDS 40.0%
ATTTGCATGGTTATTGGGCT+GGG - chr3_2:30110032-30110051 Msa0402190:CDS 40.0%
TGATCGGTATGAAGAGATGA+TGG - chr3_2:30110060-30110079 Msa0402190:CDS 40.0%
!! GATGATGGAGAAGTATCATC+CGG - chr3_2:30110075-30110094 Msa0402190:CDS 40.0%
!! ATGATGGAGAAGTATCATCC+GGG - chr3_2:30110076-30110095 Msa0402190:CDS 40.0%
! CCTTTTGTGACGCATTTTGT+GGG - chr3_2:30110118-30110137 Msa0402190:CDS 40.0%
! CTTTTGTGACGCATTTTGTG+GGG - chr3_2:30110119-30110138 Msa0402190:CDS 40.0%
TAATCTCCATAACTCCCACA+AGG + chr3_2:30110151-30110170 None:intergenic 40.0%
! TTCCTGATCCGCTTGATTTT+AGG + chr3_2:30110274-30110293 None:intergenic 40.0%
GTTGCCTTCGTATATCAAAC+TGG + chr3_2:30110327-30110346 None:intergenic 40.0%
CACTGCATTGTGAATGTTTC+AGG + chr3_2:30110489-30110508 None:intergenic 40.0%
CTGAAACATTCACAATGCAG+TGG - chr3_2:30110487-30110506 Msa0402190:CDS 40.0%
GGAAAGTAACATGTTTGGAG+TGG - chr3_2:30110536-30110555 Msa0402190:exon 40.0%
AACCCAGAGAACTGAGAGAA+GGG + chr3_2:30107470-30107489 None:intergenic 45.0%
AAACCCAGAGAACTGAGAGA+AGG + chr3_2:30107471-30107490 None:intergenic 45.0%
AAAAGAACAACCAGCACAGG+AGG - chr3_2:30107688-30107707 Msa0402190:three_prime_UTR 45.0%
!! GAGGTTGGTGTTGTTGTTGT+TGG + chr3_2:30107718-30107737 None:intergenic 45.0%
! GTTAGTTTCCTCGATGACAG+CGG + chr3_2:30107890-30107909 None:intergenic 45.0%
CAGATGGATCGGAATCAGAT+CGG + chr3_2:30107930-30107949 None:intergenic 45.0%
CTGATTCCGATCCATCTGAT+CGG - chr3_2:30107932-30107951 Msa0402190:CDS 45.0%
CTGATTCCGATCAGATGGAT+CGG + chr3_2:30107941-30107960 None:intergenic 45.0%
GGGATACTGAGAGAACAAGT+TGG - chr3_2:30108019-30108038 Msa0402190:CDS 45.0%
GCAAAGTCCCTGTTTGGATT+AGG + chr3_2:30108570-30108589 None:intergenic 45.0%
TTTGTGAGTTAAGGGACGGA+AGG + chr3_2:30108687-30108706 None:intergenic 45.0%
ATGGAGTTTGGGTGAGCAAT+TGG + chr3_2:30109288-30109307 None:intergenic 45.0%
TGTGTACAACATGGCTCACT+TGG - chr3_2:30109568-30109587 Msa0402190:intron 45.0%
CCTTCGAATCATCGGCAATT+TGG + chr3_2:30109618-30109637 None:intergenic 45.0%
CCAAATTGCCGATGATTCGA+AGG - chr3_2:30109615-30109634 Msa0402190:intron 45.0%
CATGTTATCACACCCTGAAG+TGG - chr3_2:30109640-30109659 Msa0402190:intron 45.0%
ACCAAATCCACTCCACTTCA+GGG + chr3_2:30109655-30109674 None:intergenic 45.0%
TCTTGGATCGCAATCAACAC+AGG - chr3_2:30109788-30109807 Msa0402190:intron 45.0%
CTTGGATCGCAATCAACACA+GGG - chr3_2:30109789-30109808 Msa0402190:intron 45.0%
! CGTTGGATTTGCTTGATGCT+TGG - chr3_2:30109840-30109859 Msa0402190:intron 45.0%
TCTTCTCGAATTGGGCCTTT+CGG + chr3_2:30109878-30109897 None:intergenic 45.0%
! AGAGGCTGGGAAGATTTTGA+CGG - chr3_2:30109895-30109914 Msa0402190:intron 45.0%
TGACGGCAAATCTCAAAGGA+AGG - chr3_2:30109912-30109931 Msa0402190:intron 45.0%
GAAGGACAAATGGATGGAGA+AGG - chr3_2:30109988-30110007 Msa0402190:intron 45.0%
!! TGATGGAGAAGTATCATCCG+GGG - chr3_2:30110077-30110096 Msa0402190:CDS 45.0%
! GCCTTTTGTGACGCATTTTG+TGG - chr3_2:30110117-30110136 Msa0402190:CDS 45.0%
CCCACAAAATGCGTCACAAA+AGG + chr3_2:30110121-30110140 None:intergenic 45.0%
! TGTAAGCCTTGTGGGAGTTA+TGG - chr3_2:30110142-30110161 Msa0402190:CDS 45.0%
! CTACTAAGGCATCTCTCTAC+TGG + chr3_2:30110175-30110194 None:intergenic 45.0%
AGAGAGATGCCTTAGTAGCA+TGG - chr3_2:30110177-30110196 Msa0402190:CDS 45.0%
ATGCCTTAGTAGCATGGAGA+GGG - chr3_2:30110183-30110202 Msa0402190:CDS 45.0%
! GGAGAGGGCTTTCAATTTTG+CGG - chr3_2:30110198-30110217 Msa0402190:CDS 45.0%
GTCCTAAAATCAAGCGGATC+AGG - chr3_2:30110269-30110288 Msa0402190:CDS 45.0%
GATATACGAAGGCAACATGC+AGG - chr3_2:30110331-30110350 Msa0402190:CDS 45.0%
TAGCGTCGTGACATCAATTG+AGG + chr3_2:30110442-30110461 None:intergenic 45.0%
! GTGGTGATGCTATAGCCAAT+AGG - chr3_2:30110555-30110574 Msa0402190:five_prime_UTR 45.0%
GTGATGCTATAGCCAATAGG+TGG - chr3_2:30110558-30110577 Msa0402190:five_prime_UTR 45.0%
!! CATTTCAATTGTGGTGCTGC+TGG + chr3_2:30110818-30110837 None:intergenic 45.0%
ATGTTCACGACAGAATGTCG+AGG - chr3_2:30110841-30110860 Msa0402190:five_prime_UTR 45.0%
!! TAAATATAAAGATTATAATA+TGG - chr3_2:30109727-30109746 Msa0402190:intron 5.0%
!! AGGGAGCATGTGATAGTGGA+GGG + chr3_2:30107451-30107470 None:intergenic 50.0%
!! AAGGGAGCATGTGATAGTGG+AGG + chr3_2:30107452-30107471 None:intergenic 50.0%
! GAGAAGGGAGCATGTGATAG+TGG + chr3_2:30107455-30107474 None:intergenic 50.0%
CTCCCTTCTCTCAGTTCTCT+GGG - chr3_2:30107465-30107484 Msa0402190:three_prime_UTR 50.0%
!! TGTTGGTAATCCTCCTGTGC+TGG + chr3_2:30107701-30107720 None:intergenic 50.0%
! TTTTGGATCTGACGTCCACG+TGG + chr3_2:30107757-30107776 None:intergenic 50.0%
GGATTGTTACGAAACCGCAG+AGG + chr3_2:30107807-30107826 None:intergenic 50.0%
GTAACAATCCTCGTCCTACG+TGG - chr3_2:30107817-30107836 Msa0402190:exon 50.0%
!! CATCGTTCTGAGATGTTCCG+AGG + chr3_2:30107858-30107877 None:intergenic 50.0%
CGGAACATCTCAGAACGATG+CGG - chr3_2:30107858-30107877 Msa0402190:CDS 50.0%
ATCGGATCTCAGCGAGGATA+CGG + chr3_2:30107912-30107931 None:intergenic 50.0%
AATCAGATCGGATCTCAGCG+AGG + chr3_2:30107918-30107937 None:intergenic 50.0%
TCGGTCTGATTCCGATCAGA+TGG + chr3_2:30107946-30107965 None:intergenic 50.0%
GGATTATCACACGGTTTCGG+AGG + chr3_2:30108114-30108133 None:intergenic 50.0%
CAACATGGCTCACTTGGACA+TGG - chr3_2:30109574-30109593 Msa0402190:intron 50.0%
ACATGGAGCTTGCAGGTTAC+TGG - chr3_2:30109591-30109610 Msa0402190:intron 50.0%
CATGGAGCTTGCAGGTTACT+GGG - chr3_2:30109592-30109611 Msa0402190:intron 50.0%
TATCACACCCTGAAGTGGAG+TGG - chr3_2:30109645-30109664 Msa0402190:intron 50.0%
! ACCCTGAAGTGGAGTGGATT+TGG - chr3_2:30109651-30109670 Msa0402190:intron 50.0%
CACCAAATCCACTCCACTTC+AGG + chr3_2:30109656-30109675 None:intergenic 50.0%
! CTGAAGTGGAGTGGATTTGG+TGG - chr3_2:30109654-30109673 Msa0402190:intron 50.0%
!! AGTGGAGTGGATTTGGTGGA+TGG - chr3_2:30109658-30109677 Msa0402190:intron 50.0%
CAAGCAAATCCAACGACCAC+TGG + chr3_2:30109835-30109854 None:intergenic 50.0%
GAAAGGCCCAATTCGAGAAG+AGG - chr3_2:30109877-30109896 Msa0402190:intron 50.0%
TCCCAGCCTCTTCTCGAATT+GGG + chr3_2:30109886-30109905 None:intergenic 50.0%
TTCCCAGCCTCTTCTCGAAT+TGG + chr3_2:30109887-30109906 None:intergenic 50.0%
!! ATTGGGCTGGGTTGGTTGAT+CGG - chr3_2:30110044-30110063 Msa0402190:CDS 50.0%
!! AGAAGTATCATCCGGGGCTA+GGG - chr3_2:30110083-30110102 Msa0402190:CDS 50.0%
TTTGTGGGGTGTAAGCCTTG+TGG - chr3_2:30110133-30110152 Msa0402190:CDS 50.0%
! TTGTGGGGTGTAAGCCTTGT+GGG - chr3_2:30110134-30110153 Msa0402190:CDS 50.0%
GATGCCTTAGTAGCATGGAG+AGG - chr3_2:30110182-30110201 Msa0402190:CDS 50.0%
AAGCCCTCTCCATGCTACTA+AGG + chr3_2:30110189-30110208 None:intergenic 50.0%
!! GGGAGCATGTGATAGTGGAG+GGG + chr3_2:30107450-30107469 None:intergenic 55.0%
GCTCCCTTCTCTCAGTTCTC+TGG - chr3_2:30107464-30107483 Msa0402190:three_prime_UTR 55.0%
AGTGTACGGTTACGCGAGGT+TGG + chr3_2:30107733-30107752 None:intergenic 55.0%
CTCGTCCTACGTGGCACAAT+CGG - chr3_2:30107826-30107845 Msa0402190:exon 55.0%
! TAACGCCGATTGTGCCACGT+AGG + chr3_2:30107834-30107853 None:intergenic 55.0%
GGCACAATCGGCGTTAACCT+CGG - chr3_2:30107838-30107857 Msa0402190:CDS 55.0%
GGATCCTAGACCTCATGACG+AGG - chr3_2:30108658-30108677 Msa0402190:intron 55.0%
GAGTCCTCGTCATGAGGTCT+AGG + chr3_2:30108665-30108684 None:intergenic 55.0%
CACTTGGACATGGAGCTTGC+AGG - chr3_2:30109584-30109603 Msa0402190:intron 55.0%
TCGCAATTGCCAGTGGTCGT+TGG - chr3_2:30109823-30109842 Msa0402190:intron 55.0%
ATTGGGCCTTTCGGACCCAT+GGG + chr3_2:30109869-30109888 None:intergenic 55.0%
AATTGGGCCTTTCGGACCCA+TGG + chr3_2:30109870-30109889 None:intergenic 55.0%
GCCCAATTCGAGAAGAGGCT+GGG - chr3_2:30109882-30109901 Msa0402190:intron 55.0%
TGATCATCAGCCTCGAACGC+TGG + chr3_2:30109938-30109957 None:intergenic 55.0%
! GCATGGTTATTGGGCTGGGT+TGG - chr3_2:30110036-30110055 Msa0402190:CDS 55.0%
!! GAGAAGTATCATCCGGGGCT+AGG - chr3_2:30110082-30110101 Msa0402190:CDS 55.0%
! GAAGTATCATCCGGGGCTAG+GGG - chr3_2:30110084-30110103 Msa0402190:CDS 55.0%
! CTCTATGGGTTTAGGCACCG+TGG - chr3_2:30110238-30110257 Msa0402190:CDS 55.0%
! AAGGCAACATGCAGGCACTG+TGG - chr3_2:30110339-30110358 Msa0402190:CDS 55.0%
TGGCAGTGTACGGTTACGCG+AGG + chr3_2:30107737-30107756 None:intergenic 60.0%
CGTAACCGTACACTGCCACG+TGG - chr3_2:30107739-30107758 Msa0402190:three_prime_UTR 60.0%
GACGTCCACGTGGCAGTGTA+CGG + chr3_2:30107747-30107766 None:intergenic 60.0%
CGATTGTGCCACGTAGGACG+AGG + chr3_2:30107828-30107847 None:intergenic 60.0%
GGTTAACGCCGCTGTCATCG+AGG - chr3_2:30107879-30107898 Msa0402190:CDS 60.0%
CGGAAGGAGTCCTCGTCATG+AGG + chr3_2:30108671-30108690 None:intergenic 60.0%
CTTGATGCTTGGGCCCCCAT+GGG - chr3_2:30109851-30109870 Msa0402190:intron 60.0%
TTGGGCCTTTCGGACCCATG+GGG + chr3_2:30109868-30109887 None:intergenic 60.0%
GGCCCAATTCGAGAAGAGGC+TGG - chr3_2:30109881-30109900 Msa0402190:intron 60.0%
CAAAGGAAGGCCAGCGTTCG+AGG - chr3_2:30109925-30109944 Msa0402190:intron 60.0%
GCTTGATGCTTGGGCCCCCA+TGG - chr3_2:30109850-30109869 Msa0402190:intron 65.0%
TGGGCCTTTCGGACCCATGG+GGG + chr3_2:30109867-30109886 None:intergenic 65.0%
ATCCGGGGCTAGGGGATGAG+AGG - chr3_2:30110092-30110111 Msa0402190:CDS 65.0%
CACCTCTCATCCCCTAGCCC+CGG + chr3_2:30110097-30110116 None:intergenic 65.0%
TGGGCCCCCATGGGTCCGAA+AGG - chr3_2:30109860-30109879 Msa0402190:intron 70.0%
CGGGGCTAGGGGATGAGAGG+TGG - chr3_2:30110095-30110114 Msa0402190:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 30107326 30110882 30107326 ID=Msa0402190;Name=Msa0402190
chr3_2 mRNA 30107326 30110882 30107326 ID=Msa0402190-mRNA-1;Parent=Msa0402190;Name=Msa0402190-mRNA-1;_AED=0.00;_eAED=0.00;_QI=335|1|1|1|1|1|2|507|450
chr3_2 exon 30107326 30108658 30107326 ID=Msa0402190-mRNA-1:exon:6005;Parent=Msa0402190-mRNA-1
chr3_2 exon 30110021 30110882 30110021 ID=Msa0402190-mRNA-1:exon:6004;Parent=Msa0402190-mRNA-1
chr3_2 five_prime_UTR 30110548 30110882 30110548 ID=Msa0402190-mRNA-1:five_prime_utr;Parent=Msa0402190-mRNA-1
chr3_2 CDS 30110021 30110547 30110021 ID=Msa0402190-mRNA-1:cds;Parent=Msa0402190-mRNA-1
chr3_2 CDS 30107833 30108658 30107833 ID=Msa0402190-mRNA-1:cds;Parent=Msa0402190-mRNA-1
chr3_2 three_prime_UTR 30107326 30107832 30107326 ID=Msa0402190-mRNA-1:three_prime_utr;Parent=Msa0402190-mRNA-1
Gene Sequence

>Msa0402190

ATGGGACAAGAAAACAACTTAACCCAAAAAAGAACAACCAGCACAGGAGGATTACCAACAACAACAACACCAACCTCGCGTAACCGTACACTGCCACGTGGACGTCAGATCCAAAAAACATTCAACAACATAAAGATCACAATCCTCTGCGGTTTCGTAACAATCCTCGTCCTACGTGGCACAATCGGCGTTAACCTCGGAACATCTCAGAACGATGCGGTTAACGCCGCTGTCATCGAGGAAACTAACCGTATCCTCGCTGAGATCCGATCTGATTCCGATCCATCTGATCGGAATCAGACCGAAACTTTTATGAGTTTGAATGAAACTTATGCTCTTGGTCCTAAGATCCTTAATTGGGATACTGAGAGAACAAGTTGGTTAGATAAGAACCGTGAATATCCTAATTTTGTTAAGGGGAAACCCAGAATTTTGCTTCTTACTGGTTCGCCTCCGAAACCGTGTGATAATCCTATTGGTGATCATTATCTTTTGAAATCTATCAAGAATAAGATTGATTATTGCAGATTGCATGGCATTGAAATTGTGTACAACATGGCTCACTTGGACATGGAGCTTGCAGGTTACTGGGCCAAATTGCCGATGATTCGAAGGCTCATGTTATCACACCCTGAAGTGGAGTGGATTTGGTGGATGGACAGTGATGCATTCTTCACTGACATGGTGTTTGAGCTTCCCATGAGTAAATATAAAGATTATAATATGGTTATTCATGGGTATCCTGATTTGTTGTTCGAGCAGAATTCTTGGATCGCAATCAACACAGGGAGCTTTTTGTTTCGCAATTGCCAGTGGTCGTTGGATTTGCTTGATGCTTGGGCCCCCATGGGTCCGAAAGGCCCAATTCGAGAAGAGGCTGGGAAGATTTTGACGGCAAATCTCAAAGGAAGGCCAGCGTTCGAGGCTGATGATCAATCAGCGTTGATATATTTATTGCTGTCAAAGAAGGACAAATGGATGGAGAAGGTATTTCTTGAGAATTCTTTCTATTTGCATGGTTATTGGGCTGGGTTGGTTGATCGGTATGAAGAGATGATGGAGAAGTATCATCCGGGGCTAGGGGATGAGAGGTGGCCTTTTGTGACGCATTTTGTGGGGTGTAAGCCTTGTGGGAGTTATGGAGATTATCCAGTAGAGAGATGCCTTAGTAGCATGGAGAGGGCTTTCAATTTTGCGGATAATCAAGTGCTTAAACTCTATGGGTTTAGGCACCGTGGATTGTTAAGTCCTAAAATCAAGCGGATCAGGAACGAGACGATTACTCCTTTAGAGTTTGTAGACCAGTTTGATATACGAAGGCAACATGCAGGCACTGTGGAACCAAAAAATTAG
Protein sequence

>Msa0402190

MGQENNLTQKRTTSTGGLPTTTTPTSRNRTLPRGRQIQKTFNNIKITILCGFVTILVLRGTIGVNLGTSQNDAVNAAVIEETNRILAEIRSDSDPSDRNQTETFMSLNETYALGPKILNWDTERTSWLDKNREYPNFVKGKPRILLLTGSPPKPCDNPIGDHYLLKSIKNKIDYCRLHGIEIVYNMAHLDMELAGYWAKLPMIRRLMLSHPEVEWIWWMDSDAFFTDMVFELPMSKYKDYNMVIHGYPDLLFEQNSWIAINTGSFLFRNCQWSLDLLDAWAPMGPKGPIREEAGKILTANLKGRPAFEADDQSALIYLLLSKKDKWMEKVFLENSFYLHGYWAGLVDRYEEMMEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLSSMERAFNFADNQVLKLYGFRHRGLLSPKIKRIRNETITPLEFVDQFDIRRQHAGTVEPKN*