AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0484750

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0484750 MtrunA17_Chr7g0227631 45.588 68 33 3 75 141 168 232 5.85e-11 60.1
Msa0484750 MtrunA17_Chr7g0227641 45.588 68 33 3 75 141 224 288 6.88e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 121 sgRNAs with CRISPR-Local

Find 550 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGATAAGGGTTGGTTGTTC+TGG 0.149366 3_4:+2268208 Msa0484750:CDS
TCTTAAGCAAACAGAATATT+TGG 0.173113 3_4:-2268605 None:intergenic
TCTATTTATAGCGTATATTT+TGG 0.176771 3_4:+2261466 Msa0484750:five_prime_UTR
TTGGTTAATCTTGATAGTTT+AGG 0.231729 3_4:-2263380 None:intergenic
GTTGGTTAATCTTAATAGTT+TGG 0.239335 3_4:-2268245 None:intergenic
TGGTTAATCTTGATAGTTTA+GGG 0.253092 3_4:-2263379 None:intergenic
TTGGTTAATCTTAATAGTTT+GGG 0.267268 3_4:-2268244 None:intergenic
GGGTTGGTTGTTCTGGTTGT+AGG 0.300174 3_4:+2268215 Msa0484750:CDS
ACATTGGAATCAAACGCTTC+TGG 0.310843 3_4:-2260765 None:intergenic
TCCATGCAAAAGCATTCTTA+TGG 0.313111 3_4:-2268640 None:intergenic
GGCTTGGTTGTTGTTGGTTT+AGG 0.319334 3_4:+2263351 Msa0484750:CDS
CGTTGTGGCGACAGATGTTT+TGG 0.328261 3_4:-2260851 None:intergenic
TTCTATCAAGCAGTTCAAAT+TGG 0.330817 3_4:-2266385 None:intergenic
ATAGATTGATATCTTTATAA+TGG 0.331081 3_4:-2260909 None:intergenic
AAACTCTCCATTACTTTCAT+TGG 0.331462 3_4:-2261230 None:intergenic
TTGAATTTGCAGAGAGGAAT+CGG 0.338801 3_4:+2261286 Msa0484750:five_prime_UTR
GTTCTGCAGTAGGGTTCATT+TGG 0.364655 3_4:+2268348 Msa0484750:three_prime_UTR
CCCAGGTATGGGTGGGATAA+GGG 0.372365 3_4:+2268195 Msa0484750:CDS
AGACAGAATCAGCGATTTAC+CGG 0.377446 3_4:+2260792 Msa0484750:five_prime_UTR
GCCCAGGTATGGGTGGGATA+AGG 0.379711 3_4:+2268194 Msa0484750:CDS
ACCCTTATCCCACCCATACC+TGG 0.379845 3_4:-2268196 None:intergenic
TTGTGCAGCTTGACCACTAT+TGG 0.382959 3_4:-2263416 None:intergenic
ATGTAGGTTCAGCCCATGTA+TGG 0.386254 3_4:+2263319 Msa0484750:intron
AGGGTAAGATTCTCAAGCTT+TGG 0.387860 3_4:-2266423 None:intergenic
GGCTTATCTTTGCGTCCAAT+TGG 0.387906 3_4:+2266358 Msa0484750:CDS
AGCTTGACCACTCTTCTTGT+TGG 0.403234 3_4:-2268263 None:intergenic
ATGTAGGTTCAGCCCAGGTA+TGG 0.403828 3_4:+2268183 Msa0484750:intron
GGCTATTCTCAGGAAGCATA+TGG 0.404604 3_4:+2267792 Msa0484750:CDS
TATTGGCTGCCTGATCTTGT+TGG 0.411628 3_4:-2263399 None:intergenic
GTTCAAATTGGTATGCCAAT+TGG 0.418748 3_4:-2266373 None:intergenic
TGAGAGTGAGTATCAAAGGT+AGG 0.425885 3_4:-2260723 None:intergenic
CATTGGAATCAAACGCTTCT+GGG 0.427251 3_4:-2260764 None:intergenic
AGACAAGGCTTGGTTGTTGT+TGG 0.429479 3_4:+2263345 Msa0484750:CDS
ACAACATTGTCATGCTGGTT+AGG 0.430708 3_4:-2263024 None:intergenic
AACTTAACTCACCTCGAGCT+TGG 0.445621 3_4:+2266336 Msa0484750:CDS
TTCTGTTTGCTTAAGAATGT+AGG 0.445651 3_4:+2268612 Msa0484750:three_prime_UTR
TTGCATAAAAGAGCAGCATT+TGG 0.446222 3_4:+2268678 Msa0484750:three_prime_UTR
ACTTAACTCACCTCGAGCTT+GGG 0.449004 3_4:+2266337 Msa0484750:CDS
CCTCCTCGTTGAACAGCAAC+AGG 0.449178 3_4:-2260937 None:intergenic
GAGAGGAATCGGGTTGTTGT+TGG 0.453510 3_4:+2261297 Msa0484750:five_prime_UTR
CAAGATTAACCAACAAGATC+AGG 0.454661 3_4:+2263390 Msa0484750:CDS
CAAATTCAAAACATTATCTC+TGG 0.463054 3_4:-2261272 None:intergenic
AGCCTTGTCTCACCCATACA+TGG 0.465229 3_4:-2263332 None:intergenic
CTTACAAAGGATCGACTGTT+GGG 0.467482 3_4:+2261441 Msa0484750:five_prime_UTR
ACAATATTTGCATCAGAGCT+TGG 0.473610 3_4:-2261553 None:intergenic
ACAAATAAAATTTGACATGT+AGG 0.476036 3_4:-2261593 None:intergenic
GAGATGAGAGTGAGTATCAA+AGG 0.481451 3_4:-2260727 None:intergenic
GGCATCCCAAGGATCAAAAC+CGG 0.484279 3_4:-2268703 None:intergenic
GATATCTTTATAATGGCATC+CGG 0.485324 3_4:-2260902 None:intergenic
TAAAACACAACATCTGCAGT+TGG 0.488516 3_4:-2268427 None:intergenic
GAGAGTGAGTATCAAAGGTA+GGG 0.491243 3_4:-2260722 None:intergenic
AAAACACAACATCTGCAGTT+GGG 0.492080 3_4:-2268426 None:intergenic
TCTTACAAAGGATCGACTGT+TGG 0.496130 3_4:+2261440 Msa0484750:five_prime_UTR
TGAATTTGCAGAGAGGAATC+GGG 0.497843 3_4:+2261287 Msa0484750:five_prime_UTR
TATTCTGATGACAATATTAG+TGG 0.503959 3_4:+2268381 Msa0484750:three_prime_UTR
TGTAGGTTCAGCCCAGGTAT+GGG 0.505588 3_4:+2268184 Msa0484750:intron
CAAACCTCGTGGTTCTTAAG+TGG 0.508123 3_4:+2261024 Msa0484750:five_prime_UTR
AAAAGCTTGACATTGTTGCT+TGG 0.511442 3_4:-2261392 None:intergenic
GAGAATACAGGTTCTGCAGT+AGG 0.513701 3_4:+2268338 Msa0484750:three_prime_UTR
CCCTTATCCCACCCATACCT+GGG 0.516606 3_4:-2268195 None:intergenic
CTTCTATGTAGGTTCAGCCC+AGG 0.519420 3_4:+2268178 Msa0484750:intron
AGTAGCGGAAAATGAAATTG+AGG 0.521737 3_4:-2261082 None:intergenic
TGGTTAATCTTAATAGTTTG+GGG 0.526179 3_4:-2268243 None:intergenic
TCAAAGACTACAAACGAAAG+AGG 0.532461 3_4:-2268519 None:intergenic
CTGATTCTGTCTACAGACAT+TGG 0.536356 3_4:-2260781 None:intergenic
AAAACACTCTCAAGTGTAAG+TGG 0.538714 3_4:-2260993 None:intergenic
TCAAAGGTAGGGTTGAAGAG+TGG 0.546281 3_4:-2260711 None:intergenic
AAAGCACAACATTGTCATGC+TGG 0.546834 3_4:-2263029 None:intergenic
AAGATAACTGATTTACTACT+CGG 0.551137 3_4:+2261202 Msa0484750:five_prime_UTR
AGAATACAGGTTCTGCAGTA+GGG 0.551142 3_4:+2268339 Msa0484750:three_prime_UTR
GCTATTCTCAGGAAGCATAT+GGG 0.557318 3_4:+2267793 Msa0484750:CDS
TCATAAACGAGGCTATTCTC+AGG 0.559426 3_4:+2267782 Msa0484750:CDS
AAAAGAGCAGCATTTGGTGC+CGG 0.560258 3_4:+2268684 Msa0484750:three_prime_UTR
TCGGGTTGTTGTTGGACAGA+GGG 0.560708 3_4:+2261305 Msa0484750:five_prime_UTR
GCAAATATTGTTGTGTCCAA+GGG 0.564229 3_4:+2261565 Msa0484750:CDS
GGTATGGGTGGGATAAGGGT+TGG 0.567653 3_4:+2268199 Msa0484750:CDS
TGCAAATATTGTTGTGTCCA+AGG 0.571018 3_4:+2261564 Msa0484750:CDS
AGGTTCAGCCCAGGTATGGG+TGG 0.579365 3_4:+2268187 Msa0484750:intron
TATCTGCAGTAAGAGAATAC+AGG 0.581094 3_4:+2268326 Msa0484750:three_prime_UTR
TTCCATTACAAGGCATCCCA+AGG 0.582223 3_4:-2268714 None:intergenic
CAAGATCAGGCAGCCAATAG+TGG 0.586894 3_4:+2263403 Msa0484750:CDS
TGTGACGATTAAAGCCTCAC+AGG 0.589037 3_4:+2261511 Msa0484750:five_prime_UTR
GCCTTGTCTCACCCATACAT+GGG 0.591687 3_4:-2263331 None:intergenic
GGGTCAACCAATGAAAGTAA+TGG 0.592216 3_4:+2261223 Msa0484750:five_prime_UTR
ACATCTGCAGTTGGGAGACA+CGG 0.593183 3_4:-2268418 None:intergenic
GGGTGTGTGTTCCGTTGTAG+AGG 0.593899 3_4:+2261169 Msa0484750:five_prime_UTR
GGGTTGAAGAGTGGATTCGA+TGG 0.595248 3_4:-2260702 None:intergenic
TGAGAATCTTACCCTTCATG+AGG 0.595329 3_4:+2266431 Msa0484750:CDS
TCATTTCGCATCAAATGCAC+CGG 0.599002 3_4:+2260883 Msa0484750:five_prime_UTR
TTGGAAGAAAAGATAGAATG+TGG 0.599285 3_4:-2260828 None:intergenic
ATGTGGCAGATAATAGAGTC+CGG 0.601418 3_4:-2260811 None:intergenic
ATCGGGTTGTTGTTGGACAG+AGG 0.602604 3_4:+2261304 Msa0484750:five_prime_UTR
TGTAGGTTCAGCCCATGTAT+GGG 0.604614 3_4:+2263320 Msa0484750:intron
CACTGCACTGCTATTAAGAG+AGG 0.605624 3_4:+2261051 Msa0484750:five_prime_UTR
GCCCATGTATGGGTGAGACA+AGG 0.605995 3_4:+2263330 Msa0484750:CDS
ATTCTGATGACAATATTAGT+GGG 0.606836 3_4:+2268382 Msa0484750:three_prime_UTR
ACCTTGAGCTTGTCTTACAA+AGG 0.611911 3_4:+2261428 Msa0484750:five_prime_UTR
CCTCGTGGTTCTTAAGTGGA+AGG 0.612326 3_4:+2261028 Msa0484750:five_prime_UTR
TGACATGTAGGAGAGCCCCT+TGG 0.621069 3_4:-2261581 None:intergenic
CCTGTTGCTGTTCAACGAGG+AGG 0.626005 3_4:+2260937 Msa0484750:five_prime_UTR
GGTTCAGCCCAGGTATGGGT+GGG 0.628832 3_4:+2268188 Msa0484750:intron
TGCATTTGATGCGAAATGAT+CGG 0.634465 3_4:-2260879 None:intergenic
CAAAGATAAGCCCAAGCTCG+AGG 0.635434 3_4:-2266347 None:intergenic
AGATAACTGATTTACTACTC+GGG 0.639482 3_4:+2261203 Msa0484750:five_prime_UTR
AAATGATCGGATGGCCGTTG+TGG 0.640364 3_4:-2260866 None:intergenic
ACTGATACACGACTTACAAG+TGG 0.643573 3_4:-2268582 None:intergenic
CCATAGGTGTCTCATAAACG+AGG 0.646187 3_4:+2267771 Msa0484750:intron
GTGACGATTAAAGCCTCACA+GGG 0.647822 3_4:+2261512 Msa0484750:five_prime_UTR
TTTGATGCGAAATGATCGGA+TGG 0.648188 3_4:-2260875 None:intergenic
CAAATATTGTTGTGTCCAAG+GGG 0.648865 3_4:+2261566 Msa0484750:CDS
TGTATGGGTGAGACAAGGCT+TGG 0.649034 3_4:+2263335 Msa0484750:CDS
AGATTAACCAACAAGAAGAG+TGG 0.661252 3_4:+2268256 Msa0484750:CDS
TCCTTTGTAAGACAAGCTCA+AGG 0.661671 3_4:-2261429 None:intergenic
GTTCCTGTTGCTGTTCAACG+AGG 0.661712 3_4:+2260934 Msa0484750:five_prime_UTR
CAAAACATCTGTCGCCACAA+CGG 0.664235 3_4:+2260852 Msa0484750:five_prime_UTR
TTTCAATTGTACAAACCTCG+TGG 0.666672 3_4:+2261013 Msa0484750:five_prime_UTR
ACACTCTCAAGTGTAAGTGG+TGG 0.674139 3_4:-2260990 None:intergenic
TATCTGCAAATCCTCTACAA+CGG 0.674311 3_4:-2261180 None:intergenic
GACGATTAAAGCCTCACAGG+GGG 0.686194 3_4:+2261514 Msa0484750:five_prime_UTR
CCTTCCACTTAAGAACCACG+AGG 0.712444 3_4:-2261028 None:intergenic
TGACGATTAAAGCCTCACAG+GGG 0.763827 3_4:+2261513 Msa0484750:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAAAAACTATAAAATC+TGG - chr3_4:2262465-2262484 None:intergenic 10.0%
!! ATATATAAAAAAAAACTATC+TGG - chr3_4:2262598-2262617 None:intergenic 10.0%
!!! ATTTTTGTGTATTAATTAAA+AGG - chr3_4:2265069-2265088 None:intergenic 10.0%
!!! TATATTAAATATTCTTTTGA+TGG + chr3_4:2265088-2265107 Msa0484750:intron 10.0%
!!! AAAATGTAATAAATGATTTT+AGG + chr3_4:2265351-2265370 Msa0484750:intron 10.0%
!! CAAAATAACATAAATAAATT+AGG - chr3_4:2266528-2266547 None:intergenic 10.0%
!! ATAGATTGATATCTTTATAA+TGG - chr3_4:2260912-2260931 None:intergenic 15.0%
!!! AGTATTTTATAATTTCAATC+AGG + chr3_4:2263874-2263893 Msa0484750:intron 15.0%
!!! GTATTTTATAATTTCAATCA+GGG + chr3_4:2263875-2263894 Msa0484750:intron 15.0%
!!! ACATTTTAATTTCTTTTTGA+AGG + chr3_4:2265036-2265055 Msa0484750:intron 15.0%
!! ATCAAAAAGACTATAAAATT+GGG - chr3_4:2267410-2267429 None:intergenic 15.0%
!! TATCAAAAAGACTATAAAAT+TGG - chr3_4:2267411-2267430 None:intergenic 15.0%
!!! TCTATTTATAGCGTATATTT+TGG + chr3_4:2261466-2261485 Msa0484750:five_prime_UTR 20.0%
!! ACAAATAAAATTTGACATGT+AGG - chr3_4:2261596-2261615 None:intergenic 20.0%
!!! ATGTCAAATTTTATTTGTTG+AGG + chr3_4:2261598-2261617 Msa0484750:CDS 20.0%
!!! ACTTTTCTTTGATACTAATA+TGG + chr3_4:2261708-2261727 Msa0484750:intron 20.0%
!! TAAGAATAGAAATTTCACAA+AGG - chr3_4:2261829-2261848 None:intergenic 20.0%
!!! GTTTTCACTAATTTGAATAT+TGG + chr3_4:2262242-2262261 Msa0484750:intron 20.0%
!! TATTGAGTAAAAGTAAAGAA+AGG + chr3_4:2262310-2262329 Msa0484750:intron 20.0%
!! ATATCACAATAACAAAACAA+AGG - chr3_4:2262388-2262407 None:intergenic 20.0%
!!! ATATGATCTTTCTTCTTTTA+TGG + chr3_4:2262406-2262425 Msa0484750:intron 20.0%
!! TAATAAATTAAGCAAGTTAG+TGG + chr3_4:2262439-2262458 Msa0484750:intron 20.0%
!!! AATTTTATAACCTTTCTCAT+AGG + chr3_4:2262823-2262842 Msa0484750:intron 20.0%
!! TTCAAACATGAAATTAAAGA+AGG + chr3_4:2263201-2263220 Msa0484750:intron 20.0%
!! TCAAACATGAAATTAAAGAA+GGG + chr3_4:2263202-2263221 Msa0484750:intron 20.0%
!! TATATAATGTTTCCATTACA+AGG - chr3_4:2263855-2263874 None:intergenic 20.0%
!!! TTTTCTAGAAAGTAAACTAA+TGG - chr3_4:2264310-2264329 None:intergenic 20.0%
!! ATCTACAAATTTGTAAATTG+TGG - chr3_4:2264428-2264447 None:intergenic 20.0%
!!! TAAGTAGTTTTTCTATTAAG+AGG + chr3_4:2264503-2264522 Msa0484750:intron 20.0%
!! GAAAGAAAAAAAACCTTTAA+TGG - chr3_4:2265330-2265349 None:intergenic 20.0%
!! AAAATACAATGTTGTTCAAA+TGG - chr3_4:2266022-2266041 None:intergenic 20.0%
!!! TTGAACAACATTGTATTTTT+TGG + chr3_4:2266023-2266042 Msa0484750:intron 20.0%
!!! CAAATTACTGATTTATTACT+CGG + chr3_4:2266092-2266111 Msa0484750:intron 20.0%
!!! TTTCGCATTCTTTAAAATAT+AGG - chr3_4:2266691-2266710 None:intergenic 20.0%
!! TGTTTCACTAATTTGAAAAT+TGG + chr3_4:2267188-2267207 Msa0484750:intron 20.0%
!! GTTTCACTAATTTGAAAATT+GGG + chr3_4:2267189-2267208 Msa0484750:intron 20.0%
!! ATTAATGACATACTATTTAC+TGG + chr3_4:2267310-2267329 Msa0484750:intron 20.0%
!! TTAATGACATACTATTTACT+GGG + chr3_4:2267311-2267330 Msa0484750:intron 20.0%
!!! AAGTAGATAATTTGCAAATA+TGG + chr3_4:2267725-2267744 Msa0484750:intron 20.0%
!!! AGTAGATAATTTGCAAATAT+GGG + chr3_4:2267726-2267745 Msa0484750:intron 20.0%
!! TTGGTTAATCTTAATAGTTT+GGG - chr3_4:2268247-2268266 None:intergenic 20.0%
!!! TTGACTCTAGAAAAATATAT+TGG + chr3_4:2268538-2268557 Msa0484750:three_prime_UTR 20.0%
!!! AGATTTTAATAAGCTTCTTG+AGG + chr3_4:2261147-2261166 Msa0484750:five_prime_UTR 25.0%
!!! GATTTTAATAAGCTTCTTGA+GGG + chr3_4:2261148-2261167 Msa0484750:five_prime_UTR 25.0%
!!! ATTTTAATAAGCTTCTTGAG+GGG + chr3_4:2261149-2261168 Msa0484750:five_prime_UTR 25.0%
!! AAGATAACTGATTTACTACT+CGG + chr3_4:2261202-2261221 Msa0484750:five_prime_UTR 25.0%
! CAAATTCAAAACATTATCTC+TGG - chr3_4:2261275-2261294 None:intergenic 25.0%
!!! CAAATTTTATTTGTTGAGGA+AGG + chr3_4:2261602-2261621 Msa0484750:CDS 25.0%
! TGATACTAATATGGTAGTAT+TGG + chr3_4:2261717-2261736 Msa0484750:intron 25.0%
! ATTGAAAATATATGCCATAG+AGG - chr3_4:2261778-2261797 None:intergenic 25.0%
! AACAATGTACATGTTTATTG+TGG + chr3_4:2261939-2261958 Msa0484750:intron 25.0%
! ACAATGTACATGTTTATTGT+GGG + chr3_4:2261940-2261959 Msa0484750:intron 25.0%
! TTGCAAATTATGATATCCAT+TGG - chr3_4:2261987-2262006 None:intergenic 25.0%
!!! CTGTAGCTTATTTTTTAGTA+TGG + chr3_4:2262113-2262132 Msa0484750:intron 25.0%
! GTTTCAATTAGTTAATCAAG+TGG - chr3_4:2262192-2262211 None:intergenic 25.0%
!!! TTCCTACAACAATTGATTTT+TGG + chr3_4:2262215-2262234 Msa0484750:intron 25.0%
! AACCAAAAATCAATTGTTGT+AGG - chr3_4:2262220-2262239 None:intergenic 25.0%
! AATGAGTTAAACAATCTAGA+TGG - chr3_4:2262281-2262300 None:intergenic 25.0%
! ATTAATGAAATACTCTTCAC+TGG + chr3_4:2262361-2262380 Msa0484750:intron 25.0%
! TTAATGAAATACTCTTCACT+GGG + chr3_4:2262362-2262381 Msa0484750:intron 25.0%
! ATATATTCCTTCTTGTTCTA+AGG + chr3_4:2262484-2262503 Msa0484750:intron 25.0%
! TATATATACCTTCTTGTCTA+AGG + chr3_4:2262611-2262630 Msa0484750:intron 25.0%
!!! CTTTGATGTGGTAATTTTTT+TGG + chr3_4:2263055-2263074 Msa0484750:intron 25.0%
!!! GGATCAGAAATAATTTTAGT+TGG + chr3_4:2263076-2263095 Msa0484750:intron 25.0%
! TGAAACTACTACGAATTAAT+TGG - chr3_4:2263178-2263197 None:intergenic 25.0%
!! GATGATATTTTCTTCTATGT+AGG + chr3_4:2263303-2263322 Msa0484750:intron 25.0%
!! TGGTTAATCTTGATAGTTTA+GGG - chr3_4:2263382-2263401 None:intergenic 25.0%
!! TTGGTTAATCTTGATAGTTT+AGG - chr3_4:2263383-2263402 None:intergenic 25.0%
!!! TTCTTTTTTCTGATTTTAGC+TGG + chr3_4:2263602-2263621 Msa0484750:intron 25.0%
! ACTACATATGAAAGAGAAAA+TGG - chr3_4:2263659-2263678 None:intergenic 25.0%
!! TATCCACCAATATATCTTTT+TGG - chr3_4:2263690-2263709 None:intergenic 25.0%
! ACATTATAATTGGATAGTGT+TGG - chr3_4:2264099-2264118 None:intergenic 25.0%
!! GTATTGGTGTACATTATAAT+TGG - chr3_4:2264109-2264128 None:intergenic 25.0%
! AAAAGATTATCCAAAACAGA+TGG - chr3_4:2264131-2264150 None:intergenic 25.0%
!!! GCACAAATGCTATTTTATTT+AGG + chr3_4:2264176-2264195 Msa0484750:intron 25.0%
! ATAATATCATTGAGACAACT+TGG + chr3_4:2264226-2264245 Msa0484750:intron 25.0%
!! TGGTAATGTCTCAAATATTT+AGG + chr3_4:2264246-2264265 Msa0484750:intron 25.0%
! GGTAATGTCTCAAATATTTA+GGG + chr3_4:2264247-2264266 Msa0484750:intron 25.0%
! GCATAATACAAAGTTGTATT+AGG - chr3_4:2264360-2264379 None:intergenic 25.0%
!! AATGATAATGTATTTGAGCT+AGG - chr3_4:2264385-2264404 None:intergenic 25.0%
! CACACAATTGATAAATTAGA+CGG + chr3_4:2264919-2264938 Msa0484750:intron 25.0%
!!! ATGTCTAGAATTTCGTTTTT+TGG + chr3_4:2265427-2265446 Msa0484750:intron 25.0%
!! ATTATTAGAATCAAAGCGTT+GGG - chr3_4:2265513-2265532 None:intergenic 25.0%
!!! GATTTTAATAAGCTTATCGA+GGG + chr3_4:2266047-2266066 Msa0484750:intron 25.0%
! AATTTGCAAATCATCTACAA+CGG - chr3_4:2266078-2266097 None:intergenic 25.0%
! ATTAGTAAAAACCTCATGAA+GGG - chr3_4:2266445-2266464 None:intergenic 25.0%
!!! ATGTTATTTTGTCAGTTTGA+TGG + chr3_4:2266537-2266556 Msa0484750:intron 25.0%
! CAAAAAACCACAAAATGTAT+TGG + chr3_4:2266584-2266603 Msa0484750:intron 25.0%
! TTAAAAACATGCACTCTTAT+AGG + chr3_4:2266630-2266649 Msa0484750:intron 25.0%
! ACAAATAAAATTCGACATGT+AGG - chr3_4:2266807-2266826 None:intergenic 25.0%
!!! ATGTCGAATTTTATTTGTTG+AGG + chr3_4:2266809-2266828 Msa0484750:intron 25.0%
! ACTTATATTTCACAAAGGTT+GGG - chr3_4:2267028-2267047 None:intergenic 25.0%
! TACTTATATTTCACAAAGGT+TGG - chr3_4:2267029-2267048 None:intergenic 25.0%
! CTCATACTTATATTTCACAA+AGG - chr3_4:2267033-2267052 None:intergenic 25.0%
! TATGAGAATCAAGTTTAGTA+CGG + chr3_4:2267047-2267066 Msa0484750:intron 25.0%
! AATGAGTTAAACAATCAAGA+TGG - chr3_4:2267226-2267245 None:intergenic 25.0%
! AAAGAAAGTTGAAGATTGTT+TGG + chr3_4:2267273-2267292 Msa0484750:intron 25.0%
! TAAGACCTTACTTCTTATAT+TGG + chr3_4:2267356-2267375 Msa0484750:intron 25.0%
! AAAAGCCAATATAAGAAGTA+AGG - chr3_4:2267364-2267383 None:intergenic 25.0%
! TGTATAATTATGTGAGTAAG+TGG + chr3_4:2267384-2267403 Msa0484750:intron 25.0%
! TTGGAATTAATTCTATATCG+AGG + chr3_4:2267557-2267576 Msa0484750:intron 25.0%
! AGTAATGACAATAGATTATC+AGG - chr3_4:2267847-2267866 None:intergenic 25.0%
! TGAAACTACTACGAATTAAT+TGG - chr3_4:2263178-2263197 None:intergenic 25.0%
! TTCAAACATGAAATTCAAGA+AGG + chr3_4:2268051-2268070 Msa0484750:intron 25.0%
! TCAAACATGAAATTCAAGAA+GGG + chr3_4:2268052-2268071 Msa0484750:intron 25.0%
!! GATGATATTTTCTTCTATGT+AGG + chr3_4:2263303-2263322 Msa0484750:intron 25.0%
! TGGTTAATCTTAATAGTTTG+GGG - chr3_4:2268246-2268265 None:intergenic 25.0%
! GTTGGTTAATCTTAATAGTT+TGG - chr3_4:2268248-2268267 None:intergenic 25.0%
! TATTCTGATGACAATATTAG+TGG + chr3_4:2268381-2268400 Msa0484750:three_prime_UTR 25.0%
! ATTCTGATGACAATATTAGT+GGG + chr3_4:2268382-2268401 Msa0484750:three_prime_UTR 25.0%
!! ACTCTAGAAAAATATATTGG+TGG + chr3_4:2268541-2268560 Msa0484750:three_prime_UTR 25.0%
! TCTTAAGCAAACAGAATATT+TGG - chr3_4:2268608-2268627 None:intergenic 25.0%
TTGGAAGAAAAGATAGAATG+TGG - chr3_4:2260831-2260850 None:intergenic 30.0%
GATATCTTTATAATGGCATC+CGG - chr3_4:2260905-2260924 None:intergenic 30.0%
!!! AAATGTAGAGTTTTGAGTAG+CGG - chr3_4:2261100-2261119 None:intergenic 30.0%
! AGATAACTGATTTACTACTC+GGG + chr3_4:2261203-2261222 Msa0484750:five_prime_UTR 30.0%
AAACTCTCCATTACTTTCAT+TGG - chr3_4:2261233-2261252 None:intergenic 30.0%
!! AATGTTTTGAATTTGCAGAG+AGG + chr3_4:2261280-2261299 Msa0484750:five_prime_UTR 30.0%
AAGTAGAAACAAGTAGAAAG+TGG - chr3_4:2261651-2261670 None:intergenic 30.0%
! ACTAATATGGTAGTATTGGA+TGG + chr3_4:2261721-2261740 Msa0484750:intron 30.0%
ATAGAAATTTCACAAAGGCT+GGG - chr3_4:2261824-2261843 None:intergenic 30.0%
AATAGAAATTTCACAAAGGC+TGG - chr3_4:2261825-2261844 None:intergenic 30.0%
ATAAACATGTACATTGTTCG+AGG - chr3_4:2261937-2261956 None:intergenic 30.0%
TATGAGAATTGCGTTTAGTA+TGG + chr3_4:2262084-2262103 Msa0484750:intron 30.0%
TTAATGCAATTGCAGCATAA+TGG + chr3_4:2262695-2262714 Msa0484750:intron 30.0%
TGATAAATTTGACGCTCTTT+GGG + chr3_4:2262738-2262757 Msa0484750:intron 30.0%
TAAAAGTCTGCTCAAAAGAA+GGG + chr3_4:2263151-2263170 Msa0484750:intron 30.0%
AAGAATCAGTAAGAGAATAC+AGG + chr3_4:2263464-2263483 Msa0484750:intron 30.0%
TTATTCTGATGACAATGTGT+GGG + chr3_4:2263518-2263537 Msa0484750:intron 30.0%
!!! TTTTTTCTGATTTTAGCTGG+TGG + chr3_4:2263605-2263624 Msa0484750:intron 30.0%
CTGACTCCAAAAAGATATAT+TGG + chr3_4:2263681-2263700 Msa0484750:intron 30.0%
ACTCCAAAAAGATATATTGG+TGG + chr3_4:2263684-2263703 Msa0484750:intron 30.0%
TATGTGTTACAACTTACAAG+TGG - chr3_4:2263728-2263747 None:intergenic 30.0%
! TCTTAAGCAAGCAGAATTTT+TGG - chr3_4:2263756-2263775 None:intergenic 30.0%
! CATTTTATGTTTAACAGCAG+AGG + chr3_4:2263904-2263923 Msa0484750:intron 30.0%
AATAAATCTGAACCTGTGAA+TGG - chr3_4:2263975-2263994 None:intergenic 30.0%
ATTATGAACCGAAATTGCTT+TGG - chr3_4:2264009-2264028 None:intergenic 30.0%
CATACAATGTAAAGACTATC+TGG - chr3_4:2264076-2264095 None:intergenic 30.0%
TTATCCAAAACAGATGGTAT+TGG - chr3_4:2264125-2264144 None:intergenic 30.0%
TAGAAAGTAAACTAATGGAG+CGG - chr3_4:2264305-2264324 None:intergenic 30.0%
ATGAAAACAGTTTCTGTGTA+TGG - chr3_4:2264451-2264470 None:intergenic 30.0%
!!! AACAACCCAGCTTTTATTTT+TGG + chr3_4:2264526-2264545 Msa0484750:intron 30.0%
!!! ACAACCCAGCTTTTATTTTT+GGG + chr3_4:2264527-2264546 Msa0484750:intron 30.0%
TTTCCCCAAAAATAAAAGCT+GGG - chr3_4:2264534-2264553 None:intergenic 30.0%
! TTTTCCCCAAAAATAAAAGC+TGG - chr3_4:2264535-2264554 None:intergenic 30.0%
! ACAAGAGTGTAAGGAAATAA+AGG + chr3_4:2264745-2264764 Msa0484750:intron 30.0%
! CAAGAGTGTAAGGAAATAAA+GGG + chr3_4:2264746-2264765 Msa0484750:intron 30.0%
! TATGTAACATTTTCCTTACG+TGG + chr3_4:2264773-2264792 Msa0484750:intron 30.0%
! ATGTAACATTTTCCTTACGT+GGG + chr3_4:2264774-2264793 Msa0484750:intron 30.0%
! GGGTTTAATACTACGTTTTA+AGG + chr3_4:2264794-2264813 Msa0484750:intron 30.0%
!! GGTCATTTTACCCATTTATT+TGG + chr3_4:2264864-2264883 Msa0484750:intron 30.0%
! CATTTTACCCATTTATTTGG+TGG + chr3_4:2264867-2264886 Msa0484750:intron 30.0%
ACTCCAATTTCTATGTGAAA+AGG + chr3_4:2265137-2265156 Msa0484750:intron 30.0%
CTCCAATTTCTATGTGAAAA+GGG + chr3_4:2265138-2265157 Msa0484750:intron 30.0%
ACTGAGAGATAAGTAGAATT+TGG + chr3_4:2265239-2265258 Msa0484750:intron 30.0%
AGTTATGACTAAACAAATGC+TGG + chr3_4:2265294-2265313 Msa0484750:intron 30.0%
GAAGATGAGAGGAATAATTA+GGG - chr3_4:2265490-2265509 None:intergenic 30.0%
!! TTATTAGAATCAAAGCGTTG+GGG - chr3_4:2265512-2265531 None:intergenic 30.0%
CATTATTAGAATCAAAGCGT+TGG - chr3_4:2265514-2265533 None:intergenic 30.0%
! TTGAAAACAGTTTCAAGTGT+AGG - chr3_4:2265909-2265928 None:intergenic 30.0%
!! CGATTTTAATAAGCTTATCG+AGG + chr3_4:2266046-2266065 Msa0484750:intron 30.0%
ATTTGCAAATCATCTACAAC+GGG - chr3_4:2266077-2266096 None:intergenic 30.0%
GTTTAAACGCTTATCTGATT+TGG + chr3_4:2266139-2266158 Msa0484750:intron 30.0%
TTCTATCAAGCAGTTCAAAT+TGG - chr3_4:2266388-2266407 None:intergenic 30.0%
CATTAGTAAAAACCTCATGA+AGG - chr3_4:2266446-2266465 None:intergenic 30.0%
!! AGTGCATGTTTTTAATTGAG+AGG - chr3_4:2266625-2266644 None:intergenic 30.0%
TGCACTCTTATAGGTTATAA+AGG + chr3_4:2266639-2266658 Msa0484750:intron 30.0%
!! CGAATTTTATTTGTTGAGGA+AGG + chr3_4:2266813-2266832 Msa0484750:intron 30.0%
GTCAAAGGAATTCATTCAAT+TGG - chr3_4:2267152-2267171 None:intergenic 30.0%
TGAATTCCTTTGACAATTGA+TGG + chr3_4:2267158-2267177 Msa0484750:intron 30.0%
TTAATTCATTTGCAGCAGAA+TGG + chr3_4:2267510-2267529 Msa0484750:intron 30.0%
!! ATAAATTTTGAGAGCAGCAT+GGG + chr3_4:2267584-2267603 Msa0484750:intron 30.0%
GTGTTAAGGTAGAAACTATA+TGG + chr3_4:2267610-2267629 Msa0484750:intron 30.0%
GAAACTATATGGAAGATTTG+AGG + chr3_4:2267621-2267640 Msa0484750:intron 30.0%
AGAATTTCGTTGAAATCCAT+AGG + chr3_4:2267755-2267774 Msa0484750:intron 30.0%
! TGAAAGTTTGCTCAAAAGAA+GGG + chr3_4:2268001-2268020 Msa0484750:intron 30.0%
ACATAACAAGGAAGACAAAT+TGG - chr3_4:2268079-2268098 None:intergenic 30.0%
ACAGTATGTACTTATTCTGA+AGG - chr3_4:2268137-2268156 None:intergenic 30.0%
!!! TCCTTTTTTCTGATTTTAGC+TGG + chr3_4:2268462-2268481 Msa0484750:three_prime_UTR 30.0%
!!! CCTTTTTTCTGATTTTAGCT+GGG + chr3_4:2268463-2268482 Msa0484750:three_prime_UTR 30.0%
!!! CTTTTTTCTGATTTTAGCTG+GGG + chr3_4:2263604-2263623 Msa0484750:intron 30.0%
!!! TTTTTTCTGATTTTAGCTGG+GGG + chr3_4:2263605-2263624 Msa0484750:intron 30.0%
TTCTGTTTGCTTAAGAATGT+AGG + chr3_4:2268612-2268631 Msa0484750:three_prime_UTR 30.0%
TGCATTTGATGCGAAATGAT+CGG - chr3_4:2260882-2260901 None:intergenic 35.0%
AAAACACTCTCAAGTGTAAG+TGG - chr3_4:2260996-2261015 None:intergenic 35.0%
TTTCAATTGTACAAACCTCG+TGG + chr3_4:2261013-2261032 Msa0484750:five_prime_UTR 35.0%
! AGTAGCGGAAAATGAAATTG+AGG - chr3_4:2261085-2261104 None:intergenic 35.0%
TATCTGCAAATCCTCTACAA+CGG - chr3_4:2261183-2261202 None:intergenic 35.0%
TTGAATTTGCAGAGAGGAAT+CGG + chr3_4:2261286-2261305 Msa0484750:five_prime_UTR 35.0%
AAAAGCTTGACATTGTTGCT+TGG - chr3_4:2261395-2261414 None:intergenic 35.0%
ACAATATTTGCATCAGAGCT+TGG - chr3_4:2261556-2261575 None:intergenic 35.0%
TGCAAATATTGTTGTGTCCA+AGG + chr3_4:2261564-2261583 Msa0484750:CDS 35.0%
GCAAATATTGTTGTGTCCAA+GGG + chr3_4:2261565-2261584 Msa0484750:CDS 35.0%
CAAATATTGTTGTGTCCAAG+GGG + chr3_4:2261566-2261585 Msa0484750:CDS 35.0%
! TATTTGTTGAGGAAGGTTAG+TGG + chr3_4:2261609-2261628 Msa0484750:intron 35.0%
CTATTTCATTAGCTCCTCTA+TGG + chr3_4:2261761-2261780 Msa0484750:intron 35.0%
AACTGCTGTCAGAGAATTAT+TGG - chr3_4:2261852-2261871 None:intergenic 35.0%
ACATGTTTATTGTGGGCTTT+CGG + chr3_4:2261947-2261966 Msa0484750:intron 35.0%
TACCCTAAACTTAGTTGCAT+AGG - chr3_4:2262510-2262529 None:intergenic 35.0%
! ATGCAACTAAGTTTAGGGTA+TGG + chr3_4:2262510-2262529 Msa0484750:intron 35.0%
! TGCAACTAAGTTTAGGGTAT+GGG + chr3_4:2262511-2262530 Msa0484750:intron 35.0%
TACCCTAAACTTAGTTGCAT+AGG - chr3_4:2262510-2262529 None:intergenic 35.0%
! ATGCAACTAAGTTTAGGGTA+TGG + chr3_4:2262510-2262529 Msa0484750:intron 35.0%
! TGCAACTAAGTTTAGGGTAT+GGG + chr3_4:2262511-2262530 Msa0484750:intron 35.0%
GTGATAAATTTGACGCTCTT+TGG + chr3_4:2262737-2262756 Msa0484750:intron 35.0%
GTGTTAAGGTAGAAACTGTA+TGG + chr3_4:2262764-2262783 Msa0484750:intron 35.0%
GAAACTGTATGGAAGATTTG+AGG + chr3_4:2262775-2262794 Msa0484750:intron 35.0%
!! ACTTCCCATAATTCTAGAGT+AGG - chr3_4:2262864-2262883 None:intergenic 35.0%
AGAACTTTGTTGAAATCCAC+AGG + chr3_4:2262910-2262929 Msa0484750:intron 35.0%
!!! TTGTGCTTTTAGCTTTGATG+TGG + chr3_4:2263043-2263062 Msa0484750:CDS 35.0%
GTAAAAGTCTGCTCAAAAGA+AGG + chr3_4:2263150-2263169 Msa0484750:intron 35.0%
CAAGATTAACCAACAAGATC+AGG + chr3_4:2263390-2263409 Msa0484750:CDS 35.0%
GTTATTCTGATGACAATGTG+TGG + chr3_4:2263517-2263536 Msa0484750:intron 35.0%
AAAACACGACATCTGTAGTT+GGG - chr3_4:2263569-2263588 None:intergenic 35.0%
TAAAACACGACATCTGTAGT+TGG - chr3_4:2263570-2263589 None:intergenic 35.0%
ATCGTAATCCTTGATCTACA+AGG + chr3_4:2263927-2263946 Msa0484750:intron 35.0%
GAATTTCACCTTGTAGATCA+AGG - chr3_4:2263938-2263957 None:intergenic 35.0%
! GTTTTCAGCCAAAGCAATTT+CGG + chr3_4:2263998-2264017 Msa0484750:intron 35.0%
! TACACCAATACCATCTGTTT+TGG + chr3_4:2264118-2264137 Msa0484750:intron 35.0%
!! TTAGGGATTAGCTGAATATG+TGG + chr3_4:2264264-2264283 Msa0484750:intron 35.0%
TAGAAAACTCTACCAGAGTT+TGG + chr3_4:2264323-2264342 Msa0484750:intron 35.0%
!!! CAACCCAGCTTTTATTTTTG+GGG + chr3_4:2264528-2264547 Msa0484750:intron 35.0%
AGTCCAATTTAGAAAACACG+TGG + chr3_4:2264569-2264588 Msa0484750:intron 35.0%
! AAGCCACGTGTTTTCTAAAT+TGG - chr3_4:2264575-2264594 None:intergenic 35.0%
! AGAGGTGTATTGTCACATAA+AGG - chr3_4:2264627-2264646 None:intergenic 35.0%
! AAAGAGAAAGTGTGTTTGTG+CGG - chr3_4:2264690-2264709 None:intergenic 35.0%
ACCTGAACCACCAAATAAAT+GGG - chr3_4:2264877-2264896 None:intergenic 35.0%
AACCTGAACCACCAAATAAA+TGG - chr3_4:2264878-2264897 None:intergenic 35.0%
! GACCCTTTTCACATAGAAAT+TGG - chr3_4:2265143-2265162 None:intergenic 35.0%
GTCAAGAATTGTTCCACATA+TGG + chr3_4:2265205-2265224 Msa0484750:intron 35.0%
GAATTGTTCCACATATGGTT+AGG + chr3_4:2265210-2265229 Msa0484750:intron 35.0%
TGGTGCTCATTAACCATTAA+AGG + chr3_4:2265314-2265333 Msa0484750:intron 35.0%
GGAAGATGAGAGGAATAATT+AGG - chr3_4:2265491-2265510 None:intergenic 35.0%
!! TTTTGGTTGGAAGAAAAGAG+AGG - chr3_4:2265608-2265627 None:intergenic 35.0%
TGTAACTTCCGAAGAACATT+AGG + chr3_4:2265882-2265901 Msa0484750:intron 35.0%
CCTTCAACTTAAGAACAACA+AGG - chr3_4:2265941-2265960 None:intergenic 35.0%
!! CCTTGTTGTTCTTAAGTTGA+AGG + chr3_4:2265938-2265957 Msa0484750:intron 35.0%
GAACAACATCCTCTCTTATT+AGG - chr3_4:2265968-2265987 None:intergenic 35.0%
!!! AAATGGAGAGTTTTGAGAAG+CGG - chr3_4:2266005-2266024 None:intergenic 35.0%
AATGTTTCGAATTTGCAGAG+AGG + chr3_4:2266170-2266189 Msa0484750:intron 35.0%
GTTCAAATTGGTATGCCAAT+TGG - chr3_4:2266376-2266395 None:intergenic 35.0%
!! TTTTGTCAGTTTGATGGACA+TGG + chr3_4:2266543-2266562 Msa0484750:intron 35.0%
!! ACCACAAAATGTATTGGTTC+CGG + chr3_4:2266590-2266609 Msa0484750:intron 35.0%
AATTGAGAGGAAAGACATTC+CGG - chr3_4:2266612-2266631 None:intergenic 35.0%
TATGTTTAAATCCCCTTGTG+AGG - chr3_4:2266739-2266758 None:intergenic 35.0%
CACAAGGGGATTTAAACATA+AGG + chr3_4:2266739-2266758 Msa0484750:intron 35.0%
! TATTTGTTGAGGAAGGTTAG+TGG + chr3_4:2261609-2261628 Msa0484750:intron 35.0%
ACTAGCAAGTAGAAACTAGT+AGG - chr3_4:2266868-2266887 None:intergenic 35.0%
TATATTTCACAAAGGTTGGG+AGG - chr3_4:2267025-2267044 None:intergenic 35.0%
! TTCCTTTGACAATTGATGGT+TGG + chr3_4:2267162-2267181 Msa0484750:intron 35.0%
AACCAACCATCAATTGTCAA+AGG - chr3_4:2267167-2267186 None:intergenic 35.0%
GGTCTATGCAACTAAGTTTA+CGG + chr3_4:2267447-2267466 Msa0484750:intron 35.0%
TTAATTCCAACTCACTACAG+TGG - chr3_4:2267547-2267566 None:intergenic 35.0%
!! GATAAATTTTGAGAGCAGCA+TGG + chr3_4:2267583-2267602 Msa0484750:intron 35.0%
! GTGAAAGTTTGCTCAAAAGA+AGG + chr3_4:2268000-2268019 Msa0484750:intron 35.0%
AGGTAATTGAACAGGAAGAA+GGG - chr3_4:2268104-2268123 None:intergenic 35.0%
AGATTAACCAACAAGAAGAG+TGG + chr3_4:2268256-2268275 Msa0484750:CDS 35.0%
! GCACAAAAATCATTTTGCTG+TGG + chr3_4:2268286-2268305 Msa0484750:CDS 35.0%
TATCTGCAGTAAGAGAATAC+AGG + chr3_4:2268326-2268345 Msa0484750:three_prime_UTR 35.0%
AAAACACAACATCTGCAGTT+GGG - chr3_4:2268429-2268448 None:intergenic 35.0%
TAAAACACAACATCTGCAGT+TGG - chr3_4:2268430-2268449 None:intergenic 35.0%
CCCAGCTAAAATCAGAAAAA+AGG - chr3_4:2268466-2268485 None:intergenic 35.0%
TCAAAGACTACAAACGAAAG+AGG - chr3_4:2268522-2268541 None:intergenic 35.0%
! ACCATAAGAATGCTTTTGCA+TGG + chr3_4:2268639-2268658 Msa0484750:three_prime_UTR 35.0%
!! TCCATGCAAAAGCATTCTTA+TGG - chr3_4:2268643-2268662 None:intergenic 35.0%
TTGCATAAAAGAGCAGCATT+TGG + chr3_4:2268678-2268697 Msa0484750:three_prime_UTR 35.0%
GAGAGTGAGTATCAAAGGTA+GGG - chr3_4:2260725-2260744 None:intergenic 40.0%
TGAGAGTGAGTATCAAAGGT+AGG - chr3_4:2260726-2260745 None:intergenic 40.0%
GAGATGAGAGTGAGTATCAA+AGG - chr3_4:2260730-2260749 None:intergenic 40.0%
CATTGGAATCAAACGCTTCT+GGG - chr3_4:2260767-2260786 None:intergenic 40.0%
ACATTGGAATCAAACGCTTC+TGG - chr3_4:2260768-2260787 None:intergenic 40.0%
CTGATTCTGTCTACAGACAT+TGG - chr3_4:2260784-2260803 None:intergenic 40.0%
AGACAGAATCAGCGATTTAC+CGG + chr3_4:2260792-2260811 Msa0484750:five_prime_UTR 40.0%
ATGTGGCAGATAATAGAGTC+CGG - chr3_4:2260814-2260833 None:intergenic 40.0%
TTTGATGCGAAATGATCGGA+TGG - chr3_4:2260878-2260897 None:intergenic 40.0%
TCATTTCGCATCAAATGCAC+CGG + chr3_4:2260883-2260902 Msa0484750:five_prime_UTR 40.0%
GGGTCAACCAATGAAAGTAA+TGG + chr3_4:2261223-2261242 Msa0484750:five_prime_UTR 40.0%
TGAATTTGCAGAGAGGAATC+GGG + chr3_4:2261287-2261306 Msa0484750:five_prime_UTR 40.0%
ACCTTGAGCTTGTCTTACAA+AGG + chr3_4:2261428-2261447 Msa0484750:five_prime_UTR 40.0%
TCCTTTGTAAGACAAGCTCA+AGG - chr3_4:2261432-2261451 None:intergenic 40.0%
TCTTACAAAGGATCGACTGT+TGG + chr3_4:2261440-2261459 Msa0484750:five_prime_UTR 40.0%
CTTACAAAGGATCGACTGTT+GGG + chr3_4:2261441-2261460 Msa0484750:five_prime_UTR 40.0%
TATGTTTAAATCCCCCTGTG+AGG - chr3_4:2261528-2261547 None:intergenic 40.0%
CACAGGGGGATTTAAACATA+AGG + chr3_4:2261528-2261547 Msa0484750:five_prime_UTR 40.0%
! AGGTTAGTGGATGTCTACTT+TGG + chr3_4:2261622-2261641 Msa0484750:intron 40.0%
!! ATGCATCGACTGCAAACTTT+GGG - chr3_4:2261905-2261924 None:intergenic 40.0%
!! TATGCATCGACTGCAAACTT+TGG - chr3_4:2261906-2261925 None:intergenic 40.0%
TTTATTGTGGGCTTTCGGAA+AGG + chr3_4:2261952-2261971 Msa0484750:intron 40.0%
GGAAAGGAGTAATGATCCAA+TGG + chr3_4:2261968-2261987 Msa0484750:intron 40.0%
AGGCCTATGCAACTAAGTTT+AGG + chr3_4:2262504-2262523 Msa0484750:intron 40.0%
GGCCTATGCAACTAAGTTTA+GGG + chr3_4:2262505-2262524 Msa0484750:intron 40.0%
TGGGATGTGAATCAACACAA+AGG + chr3_4:2262530-2262549 Msa0484750:intron 40.0%
GGGATGTGAATCAACACAAA+GGG + chr3_4:2262531-2262550 Msa0484750:intron 40.0%
AACACAAAGGGATAGTGACT+GGG + chr3_4:2262543-2262562 Msa0484750:intron 40.0%
TGCAATTGCAAGCAAGTTAG+TGG + chr3_4:2262572-2262591 Msa0484750:intron 40.0%
AGGCCTATGCAACTAAGTTT+AGG + chr3_4:2262504-2262523 Msa0484750:intron 40.0%
GGCCTATGCAACTAAGTTTA+GGG + chr3_4:2262505-2262524 Msa0484750:intron 40.0%
TGGGATGTGAATCAACACAA+AGG + chr3_4:2262530-2262549 Msa0484750:intron 40.0%
GGGATGTGAATCAACACAAA+GGG + chr3_4:2262531-2262550 Msa0484750:intron 40.0%
AACACAAAGGGATAGTGACT+GGG + chr3_4:2262543-2262562 Msa0484750:intron 40.0%
TTTATCACTGCAGTGGATGT+AGG - chr3_4:2262725-2262744 None:intergenic 40.0%
CGTCAAATTTATCACTGCAG+TGG - chr3_4:2262732-2262751 None:intergenic 40.0%
AAATTTGACGCTCTTTGGGT+AGG + chr3_4:2262742-2262761 Msa0484750:intron 40.0%
! ATGGAAGATTTGAGGCTCTT+TGG + chr3_4:2262783-2262802 Msa0484750:intron 40.0%
! AGATTTGAGGCTCTTTGGAT+AGG + chr3_4:2262788-2262807 Msa0484750:intron 40.0%
! GATTTGAGGCTCTTTGGATA+GGG + chr3_4:2262789-2262808 Msa0484750:intron 40.0%
! ATTTGAGGCTCTTTGGATAG+GGG + chr3_4:2262790-2262809 Msa0484750:intron 40.0%
!! CAGGCCTACTCTAGAATTAT+GGG + chr3_4:2262857-2262876 Msa0484750:intron 40.0%
! GCTATTCTGAGGAAGCATAT+CGG + chr3_4:2262946-2262965 Msa0484750:intron 40.0%
! ACAACATTGTCATGCTGGTT+AGG - chr3_4:2263027-2263046 None:intergenic 40.0%
AAAGCACAACATTGTCATGC+TGG - chr3_4:2263032-2263051 None:intergenic 40.0%
ACAGAACAGGGAAGACAAAT+TGG - chr3_4:2263229-2263248 None:intergenic 40.0%
ATGCACTTGAACAGGAAGAA+GGG - chr3_4:2263254-2263273 None:intergenic 40.0%
TATGCACTTGAACAGGAAGA+AGG - chr3_4:2263255-2263274 None:intergenic 40.0%
AACACACTATGCACTTGAAC+AGG - chr3_4:2263262-2263281 None:intergenic 40.0%
TGGTCAAGCTGCACAAAAAT+CGG + chr3_4:2263423-2263442 Msa0484750:CDS 40.0%
AGAGAATACAGGTTCTACAG+TGG + chr3_4:2263475-2263494 Msa0484750:intron 40.0%
GAGAATACAGGTTCTACAGT+GGG + chr3_4:2263476-2263495 Msa0484750:intron 40.0%
AGAATACAGGTTCTACAGTG+GGG + chr3_4:2263477-2263496 Msa0484750:intron 40.0%
ATCTGTAGTTGGGAGACAAA+GGG - chr3_4:2263559-2263578 None:intergenic 40.0%
! TGCTTTTACCTCGAACGAAA+TGG + chr3_4:2263777-2263796 Msa0484750:intron 40.0%
! GCTTTTACCTCGAACGAAAT+GGG + chr3_4:2263778-2263797 Msa0484750:intron 40.0%
AAATGCATCCCTTTCATGCA+AGG - chr3_4:2263807-2263826 None:intergenic 40.0%
TTGCATGAAAGGGATGCATT+TGG + chr3_4:2263806-2263825 Msa0484750:intron 40.0%
TCTACAAGGTGAAATTCCGT+TGG + chr3_4:2263941-2263960 Msa0484750:intron 40.0%
GTGAATGGTTTCAGAACCAA+CGG - chr3_4:2263960-2263979 None:intergenic 40.0%
!! TTGGTTCTGAAACCATTCAC+AGG + chr3_4:2263960-2263979 Msa0484750:intron 40.0%
CGGTTCATAATGCGTAACAT+TGG + chr3_4:2264018-2264037 Msa0484750:intron 40.0%
!! CATGTGTCGATTGAAATGCT+CGG + chr3_4:2264043-2264062 Msa0484750:intron 40.0%
GTTGATGTATTGCCAAACTC+TGG - chr3_4:2264338-2264357 None:intergenic 40.0%
ATTTCTGTGTGGATGTCAAG+AGG - chr3_4:2264645-2264664 None:intergenic 40.0%
! AAGAGAAAGTGTGTTTGTGC+GGG - chr3_4:2264689-2264708 None:intergenic 40.0%
ATGCATTAGGAAGAGAGAAG+AGG - chr3_4:2264718-2264737 None:intergenic 40.0%
TCTTCTCTCTTCCTAATGCA+TGG + chr3_4:2264717-2264736 Msa0484750:intron 40.0%
CTTCTCTCTTCCTAATGCAT+GGG + chr3_4:2264718-2264737 Msa0484750:intron 40.0%
TTCTCTCTTCCTAATGCATG+GGG + chr3_4:2264719-2264738 Msa0484750:intron 40.0%
CGTAGTATTAAACCCACGTA+AGG - chr3_4:2264789-2264808 None:intergenic 40.0%
GCACGATATATCACTATCCA+CGG + chr3_4:2264823-2264842 Msa0484750:intron 40.0%
CACGATATATCACTATCCAC+GGG + chr3_4:2264824-2264843 Msa0484750:intron 40.0%
!! ACGGGTCATTTTACTATCCA+CGG + chr3_4:2264842-2264861 Msa0484750:intron 40.0%
TAAATGGGTAAAATGACCCG+TGG - chr3_4:2264862-2264881 None:intergenic 40.0%
! ACCCATTTATTTGGTGGTTC+AGG + chr3_4:2264873-2264892 Msa0484750:intron 40.0%
CTATGTGAAAAGGGTCTTCA+TGG + chr3_4:2265147-2265166 Msa0484750:intron 40.0%
TGAGGGAGACAAGTAAAATC+TGG + chr3_4:2265183-2265202 Msa0484750:intron 40.0%
GTCAAACTCCTAACCATATG+TGG - chr3_4:2265221-2265240 None:intergenic 40.0%
!! TAAATCGCTGATTCTGTCCA+CGG - chr3_4:2265562-2265581 None:intergenic 40.0%
AGAGAGGATGTGACAGATAA+TGG - chr3_4:2265592-2265611 None:intergenic 40.0%
CAAGCATTCTTTCCAAGAGA+TGG + chr3_4:2265640-2265659 Msa0484750:intron 40.0%
GTGTAGGACCTAATGTTCTT+CGG - chr3_4:2265893-2265912 None:intergenic 40.0%
GAAGGCAATCCTAATAAGAG+AGG + chr3_4:2265956-2265975 Msa0484750:intron 40.0%
AGAAGCGGAAAATGAAACTG+AGG - chr3_4:2265990-2266009 None:intergenic 40.0%
TTACTCGGCTCAACTAATGA+AGG + chr3_4:2266107-2266126 Msa0484750:intron 40.0%
GGCTCAACTAATGAAGGTAA+TGG + chr3_4:2266113-2266132 Msa0484750:intron 40.0%
AGGGTAAGATTCTCAAGCTT+TGG - chr3_4:2266426-2266445 None:intergenic 40.0%
TGAGAATCTTACCCTTCATG+AGG + chr3_4:2266431-2266450 Msa0484750:CDS 40.0%
! TCCGGAACCAATACATTTTG+TGG - chr3_4:2266594-2266613 None:intergenic 40.0%
TGACGATTAAAGCCTCACAA+GGG + chr3_4:2266724-2266743 Msa0484750:intron 40.0%
ACAATAGTCGCATCAGAGTT+TGG - chr3_4:2266767-2266786 None:intergenic 40.0%
AAACTCTGATGCGACTATTG+TGG + chr3_4:2266766-2266785 Msa0484750:intron 40.0%
! AGGTTAGTGGATGTCTACTT+TGG + chr3_4:2261622-2261641 Msa0484750:intron 40.0%
AAGTAGAAACTAGTAGGTGG+TGG - chr3_4:2266862-2266881 None:intergenic 40.0%
AGCAAGTAGAAACTAGTAGG+TGG - chr3_4:2266865-2266884 None:intergenic 40.0%
! AAGTTTAGTACGGCTCTAAC+TGG + chr3_4:2267057-2267076 Msa0484750:intron 40.0%
TGATAGACCTACGTGTTCTA+AGG + chr3_4:2267426-2267445 Msa0484750:intron 40.0%
ATGCAACTAAGTTTACGGCA+TGG + chr3_4:2267452-2267471 Msa0484750:intron 40.0%
TGCAACTAAGTTTACGGCAT+GGG + chr3_4:2267453-2267472 Msa0484750:intron 40.0%
TGGGATGTGAATGAACAGAA+AGG + chr3_4:2267472-2267491 Msa0484750:intron 40.0%
GGGATGTGAATGAACAGAAA+GGG + chr3_4:2267473-2267492 Msa0484750:intron 40.0%
GGATGTGAATGAACAGAAAG+GGG + chr3_4:2267474-2267493 Msa0484750:intron 40.0%
! ATGGAAGATTTGAGGCTCTT+TGG + chr3_4:2262783-2262802 Msa0484750:intron 40.0%
! AGATTTGAGGCTCTTTGGAT+AGG + chr3_4:2262788-2262807 Msa0484750:intron 40.0%
! GATTTGAGGCTCTTTGGATA+GGG + chr3_4:2262789-2262808 Msa0484750:intron 40.0%
! ATTTGAGGCTCTTTGGATAG+GGG + chr3_4:2262790-2262809 Msa0484750:intron 40.0%
!! ACTTCCCATGATTCTAGAGT+AGG - chr3_4:2267709-2267728 None:intergenic 40.0%
TCATAAACGAGGCTATTCTC+AGG + chr3_4:2267782-2267801 Msa0484750:CDS 40.0%
! GCTATTCTCAGGAAGCATAT+GGG + chr3_4:2267793-2267812 Msa0484750:CDS 40.0%
TTACTCAGTTCCTAACAAGC+AGG + chr3_4:2267862-2267881 Msa0484750:intron 40.0%
ACAACATTGTCCTGCTTGTT+AGG - chr3_4:2267875-2267894 None:intergenic 40.0%
! TTGTGCTTTCAGCTTTGATG+TGG + chr3_4:2267891-2267910 Msa0484750:intron 40.0%
GGAAGAAGGGTAACATAACA+AGG - chr3_4:2268091-2268110 None:intergenic 40.0%
CAGGTAATTGAACAGGAAGA+AGG - chr3_4:2268105-2268124 None:intergenic 40.0%
AGCAGAACAGGTAATTGAAC+AGG - chr3_4:2268112-2268131 None:intergenic 40.0%
! ATTCTGAAGGTTAGCAGAAC+AGG - chr3_4:2268124-2268143 None:intergenic 40.0%
AGAATACAGGTTCTGCAGTA+GGG + chr3_4:2268339-2268358 Msa0484750:three_prime_UTR 40.0%
ACTGATACACGACTTACAAG+TGG - chr3_4:2268585-2268604 None:intergenic 40.0%
TCAAAGGTAGGGTTGAAGAG+TGG - chr3_4:2260714-2260733 None:intergenic 45.0%
CAAAACATCTGTCGCCACAA+CGG + chr3_4:2260852-2260871 Msa0484750:five_prime_UTR 45.0%
ACACTCTCAAGTGTAAGTGG+TGG - chr3_4:2260993-2261012 None:intergenic 45.0%
CAAACCTCGTGGTTCTTAAG+TGG + chr3_4:2261024-2261043 Msa0484750:five_prime_UTR 45.0%
CACTGCACTGCTATTAAGAG+AGG + chr3_4:2261051-2261070 Msa0484750:five_prime_UTR 45.0%
TGTGACGATTAAAGCCTCAC+AGG + chr3_4:2261511-2261530 Msa0484750:five_prime_UTR 45.0%
GTGACGATTAAAGCCTCACA+GGG + chr3_4:2261512-2261531 Msa0484750:five_prime_UTR 45.0%
TGACGATTAAAGCCTCACAG+GGG + chr3_4:2261513-2261532 Msa0484750:five_prime_UTR 45.0%
GAAATTTCACAAAGGCTGGG+AGG - chr3_4:2261821-2261840 None:intergenic 45.0%
GCATAGGCCTTAGAACAAGA+AGG - chr3_4:2262494-2262513 None:intergenic 45.0%
CAACACAAAGGGATAGTGAC+TGG + chr3_4:2262542-2262561 Msa0484750:intron 45.0%
TGCATAGGCCTTAGACAAGA+AGG - chr3_4:2262622-2262641 None:intergenic 45.0%
CAACACAAAGGGATAGTGAC+TGG + chr3_4:2262542-2262561 Msa0484750:intron 45.0%
! TTTGAGGCTCTTTGGATAGG+GGG + chr3_4:2262791-2262810 Msa0484750:intron 45.0%
!! ATTCTAGAGTAGGCCTGGTA+CGG - chr3_4:2262854-2262873 None:intergenic 45.0%
!! CCATAATTCTAGAGTAGGCC+TGG - chr3_4:2262859-2262878 None:intergenic 45.0%
!! CCAGGCCTACTCTAGAATTA+TGG + chr3_4:2262856-2262875 Msa0484750:intron 45.0%
TCTCAAACGAGGCTATTCTG+AGG + chr3_4:2262935-2262954 Msa0484750:intron 45.0%
GGAAGAAGGGTAACAGAACA+GGG - chr3_4:2263241-2263260 None:intergenic 45.0%
AGGAAGAAGGGTAACAGAAC+AGG - chr3_4:2263242-2263261 None:intergenic 45.0%
ATGTAGGTTCAGCCCATGTA+TGG + chr3_4:2263319-2263338 Msa0484750:intron 45.0%
TGTAGGTTCAGCCCATGTAT+GGG + chr3_4:2263320-2263339 Msa0484750:intron 45.0%
! AGACAAGGCTTGGTTGTTGT+TGG + chr3_4:2263345-2263364 Msa0484750:CDS 45.0%
!! GGCTTGGTTGTTGTTGGTTT+AGG + chr3_4:2263351-2263370 Msa0484750:CDS 45.0%
! TATTGGCTGCCTGATCTTGT+TGG - chr3_4:2263402-2263421 None:intergenic 45.0%
TTGTGCAGCTTGACCACTAT+TGG - chr3_4:2263419-2263438 None:intergenic 45.0%
!! GCACAAAAATCGGCTTGCTA+TGG + chr3_4:2263433-2263452 Msa0484750:CDS 45.0%
TCTGTAGTTGGGAGACAAAG+GGG - chr3_4:2263558-2263577 None:intergenic 45.0%
CATCTGTAGTTGGGAGACAA+AGG - chr3_4:2263560-2263579 None:intergenic 45.0%
AATGGGATGCCTTGCATGAA+AGG + chr3_4:2263795-2263814 Msa0484750:intron 45.0%
ATGGGATGCCTTGCATGAAA+GGG + chr3_4:2263796-2263815 Msa0484750:intron 45.0%
!!! TGGTGCTGGTTTTGATCTCT+TGG + chr3_4:2263826-2263845 Msa0484750:intron 45.0%
!!! GGTGCTGGTTTTGATCTCTT+GGG + chr3_4:2263827-2263846 Msa0484750:intron 45.0%
ATCTCTTGGGTGCCTTGTAA+TGG + chr3_4:2263840-2263859 Msa0484750:intron 45.0%
CCACGTGTTAGATTTCTGTG+TGG - chr3_4:2264656-2264675 None:intergenic 45.0%
CCACACAGAAATCTAACACG+TGG + chr3_4:2264653-2264672 Msa0484750:intron 45.0%
! AGAGAAAGTGTGTTTGTGCG+GGG - chr3_4:2264688-2264707 None:intergenic 45.0%
TTAGGAAGAGAGAAGAGGAG+AGG - chr3_4:2264713-2264732 None:intergenic 45.0%
TCTTGTACACCCCATGCATT+AGG - chr3_4:2264731-2264750 None:intergenic 45.0%
! ATGGGGTGTACAAGAGTGTA+AGG + chr3_4:2264736-2264755 Msa0484750:intron 45.0%
GTGGATAGTAAAATGACCCG+TGG - chr3_4:2264843-2264862 None:intergenic 45.0%
!! CGGGTCATTTTACTATCCAC+GGG + chr3_4:2264843-2264862 Msa0484750:intron 45.0%
! GGTGGTTCAGGTTAAATGCT+TGG + chr3_4:2264885-2264904 Msa0484750:intron 45.0%
GGTCTTCATGGTTCAGAGTT+CGG + chr3_4:2265159-2265178 Msa0484750:intron 45.0%
GGACAGAATCAGCGATTTAC+CGG + chr3_4:2265563-2265582 Msa0484750:intron 45.0%
! ATGTGACAGATAATGGCGTC+CGG - chr3_4:2265585-2265604 None:intergenic 45.0%
!!! GTAGCAGCAGATGTTTTGGT+TGG - chr3_4:2265621-2265640 None:intergenic 45.0%
! GCTTGTAGCAGCAGATGTTT+TGG - chr3_4:2265625-2265644 None:intergenic 45.0%
! CCACAATGGATTCCATCTCT+TGG - chr3_4:2265655-2265674 None:intergenic 45.0%
CCAAGAGATGGAATCCATTG+TGG + chr3_4:2265652-2265671 Msa0484750:intron 45.0%
TGTAAAGTCGAGAGCGAGAA+CGG - chr3_4:2265682-2265701 None:intergenic 45.0%
AATGATCGGATGTGCAAGGT+GGG - chr3_4:2265756-2265775 None:intergenic 45.0%
! GACATTTGAGGCGGAATGAT+CGG - chr3_4:2265770-2265789 None:intergenic 45.0%
GATCATTCCGCCTCAAATGT+CGG + chr3_4:2265769-2265788 Msa0484750:intron 45.0%
ATCATTCCGCCTCAAATGTC+GGG + chr3_4:2265770-2265789 Msa0484750:intron 45.0%
ATTCGCAATCCCGACATTTG+AGG - chr3_4:2265782-2265801 None:intergenic 45.0%
AACTTAACTCACCTCGAGCT+TGG + chr3_4:2266336-2266355 Msa0484750:CDS 45.0%
ACTTAACTCACCTCGAGCTT+GGG + chr3_4:2266337-2266356 Msa0484750:CDS 45.0%
GGCTTATCTTTGCGTCCAAT+TGG + chr3_4:2266358-2266377 Msa0484750:CDS 45.0%
! CAGTTTGATGGACATGGAGT+TGG + chr3_4:2266549-2266568 Msa0484750:intron 45.0%
! GTTATAAAGGCACGTACGCT+GGG + chr3_4:2266652-2266671 Msa0484750:intron 45.0%
GTGACGATTAAAGCCTCACA+AGG + chr3_4:2261512-2261531 Msa0484750:five_prime_UTR 45.0%
GACGATTAAAGCCTCACAAG+GGG + chr3_4:2266725-2266744 Msa0484750:intron 45.0%
GCATAGACCTTAGAACACGT+AGG - chr3_4:2267436-2267455 None:intergenic 45.0%
AACAGAAAGGGGTAGTGACT+GGG + chr3_4:2267485-2267504 Msa0484750:intron 45.0%
CAACTCACTACAGTGGATGT+AGG - chr3_4:2267540-2267559 None:intergenic 45.0%
CTACATCCACTGTAGTGAGT+TGG + chr3_4:2267538-2267557 Msa0484750:intron 45.0%
TACAAGGGGGTCTATGAGAA+AGG - chr3_4:2267681-2267700 None:intergenic 45.0%
!! CAGGCCTACTCTAGAATCAT+GGG + chr3_4:2267702-2267721 Msa0484750:intron 45.0%
CCTCGTTTATGAGACACCTA+TGG - chr3_4:2267774-2267793 None:intergenic 45.0%
CCATAGGTGTCTCATAAACG+AGG + chr3_4:2267771-2267790 Msa0484750:intron 45.0%
! GGCTATTCTCAGGAAGCATA+TGG + chr3_4:2267792-2267811 Msa0484750:CDS 45.0%
AGCTTGACCACTCTTCTTGT+TGG - chr3_4:2268266-2268285 None:intergenic 45.0%
GAGAATACAGGTTCTGCAGT+AGG + chr3_4:2268338-2268357 Msa0484750:three_prime_UTR 45.0%
GTTCTGCAGTAGGGTTCATT+TGG + chr3_4:2268348-2268367 Msa0484750:three_prime_UTR 45.0%
!! AAAAGAGCAGCATTTGGTGC+CGG + chr3_4:2268684-2268703 Msa0484750:three_prime_UTR 45.0%
!!! AAAATCATTTTTTTTTTTTT+TGG + chr3_4:2261124-2261143 Msa0484750:five_prime_UTR 5.0%
!! TAAATTAAATCTAATTTATT+AGG + chr3_4:2266955-2266974 Msa0484750:intron 5.0%
!!! GTGGCGACAGATGTTTTGGT+TGG - chr3_4:2260850-2260869 None:intergenic 50.0%
! CGTTGTGGCGACAGATGTTT+TGG - chr3_4:2260854-2260873 None:intergenic 50.0%
AAATGATCGGATGGCCGTTG+TGG - chr3_4:2260869-2260888 None:intergenic 50.0%
! GTTCCTGTTGCTGTTCAACG+AGG + chr3_4:2260934-2260953 Msa0484750:five_prime_UTR 50.0%
CCTTCCACTTAAGAACCACG+AGG - chr3_4:2261031-2261050 None:intergenic 50.0%
CCTCGTGGTTCTTAAGTGGA+AGG + chr3_4:2261028-2261047 Msa0484750:five_prime_UTR 50.0%
! GAGAGGAATCGGGTTGTTGT+TGG + chr3_4:2261297-2261316 Msa0484750:five_prime_UTR 50.0%
! ATCGGGTTGTTGTTGGACAG+AGG + chr3_4:2261304-2261323 Msa0484750:five_prime_UTR 50.0%
! TCGGGTTGTTGTTGGACAGA+GGG + chr3_4:2261305-2261324 Msa0484750:five_prime_UTR 50.0%
GACGATTAAAGCCTCACAGG+GGG + chr3_4:2261514-2261533 Msa0484750:five_prime_UTR 50.0%
! CATCGACTGCAAACTTTGGG+TGG - chr3_4:2261902-2261921 None:intergenic 50.0%
GAACGCGAGTGTGCTTTCAA+TGG + chr3_4:2262027-2262046 Msa0484750:intron 50.0%
CGCTCTTTGGGTAGGTGTTA+AGG + chr3_4:2262750-2262769 Msa0484750:intron 50.0%
!! TTCTAGAGTAGGCCTGGTAC+GGG - chr3_4:2262853-2262872 None:intergenic 50.0%
ATCCACAGGTGTCTCAAACG+AGG + chr3_4:2262924-2262943 Msa0484750:intron 50.0%
GCCTTGTCTCACCCATACAT+GGG - chr3_4:2263334-2263353 None:intergenic 50.0%
! AGCCTTGTCTCACCCATACA+TGG - chr3_4:2263335-2263354 None:intergenic 50.0%
TGTATGGGTGAGACAAGGCT+TGG + chr3_4:2263335-2263354 Msa0484750:CDS 50.0%
CAAGATCAGGCAGCCAATAG+TGG + chr3_4:2263403-2263422 Msa0484750:CDS 50.0%
GTTCTACAGTGGGGCTCATT+TGG + chr3_4:2263486-2263505 Msa0484750:intron 50.0%
CTGTAGTTGGGAGACAAAGG+GGG - chr3_4:2263557-2263576 None:intergenic 50.0%
! AAGGCATCCCATTTCGTTCG+AGG - chr3_4:2263788-2263807 None:intergenic 50.0%
!! GAAAGGGATGCATTTGGTGC+TGG + chr3_4:2263812-2263831 Msa0484750:intron 50.0%
ATGGTTCAGAGTTCGGCTGA+GGG + chr3_4:2265166-2265185 Msa0484750:intron 50.0%
ATCAGAGTTTGCGCAGAGTG+AGG - chr3_4:2265456-2265475 None:intergenic 50.0%
!! AAAGCGTTGGGGAAGATGAG+AGG - chr3_4:2265501-2265520 None:intergenic 50.0%
CTGATTCTGTCCACGGACAT+TGG - chr3_4:2265555-2265574 None:intergenic 50.0%
ATGATCGGATGTGCAAGGTG+GGG - chr3_4:2265755-2265774 None:intergenic 50.0%
GAATGATCGGATGTGCAAGG+TGG - chr3_4:2265757-2265776 None:intergenic 50.0%
AGAGGAAGCCGATTGTTGGA+CGG + chr3_4:2266188-2266207 Msa0484750:intron 50.0%
CAAACCCTCCGTCCAACAAT+CGG - chr3_4:2266199-2266218 None:intergenic 50.0%
ATTGTTGGACGGAGGGTTTG+AGG + chr3_4:2266199-2266218 Msa0484750:intron 50.0%
CAAAGATAAGCCCAAGCTCG+AGG - chr3_4:2266350-2266369 None:intergenic 50.0%
! GGTTATAAAGGCACGTACGC+TGG + chr3_4:2266651-2266670 Msa0484750:intron 50.0%
GAACAGAAAGGGGTAGTGAC+TGG + chr3_4:2267484-2267503 Msa0484750:intron 50.0%
AGCAGCATGGGCAAGTGTTA+AGG + chr3_4:2267596-2267615 Msa0484750:intron 50.0%
TAGAGTAGGCCTGGTACAAG+GGG - chr3_4:2267695-2267714 None:intergenic 50.0%
CTAGAGTAGGCCTGGTACAA+GGG - chr3_4:2267696-2267715 None:intergenic 50.0%
! TCTAGAGTAGGCCTGGTACA+AGG - chr3_4:2267697-2267716 None:intergenic 50.0%
!! CCATGATTCTAGAGTAGGCC+TGG - chr3_4:2267704-2267723 None:intergenic 50.0%
!! CCAGGCCTACTCTAGAATCA+TGG + chr3_4:2267701-2267720 Msa0484750:intron 50.0%
CTTCTATGTAGGTTCAGCCC+AGG + chr3_4:2263314-2263333 Msa0484750:intron 50.0%
ATGTAGGTTCAGCCCAGGTA+TGG + chr3_4:2268183-2268202 Msa0484750:intron 50.0%
TGTAGGTTCAGCCCAGGTAT+GGG + chr3_4:2268184-2268203 Msa0484750:intron 50.0%
!! GGGATAAGGGTTGGTTGTTC+TGG + chr3_4:2268208-2268227 Msa0484750:CDS 50.0%
!! GGGTTGGTTGTTCTGGTTGT+AGG + chr3_4:2268215-2268234 Msa0484750:CDS 50.0%
ACATCTGCAGTTGGGAGACA+CGG - chr3_4:2268421-2268440 None:intergenic 50.0%
!!! TTGGTGCCGGTTTTGATCCT+TGG + chr3_4:2268697-2268716 Msa0484750:three_prime_UTR 50.0%
!!! TGGTGCCGGTTTTGATCCTT+GGG + chr3_4:2268698-2268717 Msa0484750:three_prime_UTR 50.0%
GGCATCCCAAGGATCAAAAC+CGG - chr3_4:2268706-2268725 None:intergenic 50.0%
CCTCCTCGTTGAACAGCAAC+AGG - chr3_4:2260940-2260959 None:intergenic 55.0%
! CCTGTTGCTGTTCAACGAGG+AGG + chr3_4:2260937-2260956 Msa0484750:five_prime_UTR 55.0%
GGGTGTGTGTTCCGTTGTAG+AGG + chr3_4:2261169-2261188 Msa0484750:five_prime_UTR 55.0%
TGACATGTAGGAGAGCCCCT+TGG - chr3_4:2261584-2261603 None:intergenic 55.0%
! GCTCTTTGGATAGGGGGTGT+AGG + chr3_4:2262797-2262816 Msa0484750:intron 55.0%
! TCTAGAGTAGGCCTGGTACG+GGG - chr3_4:2262852-2262871 None:intergenic 55.0%
! AGCCTCGTTTGAGACACCTG+TGG - chr3_4:2262929-2262948 None:intergenic 55.0%
GCCCATGTATGGGTGAGACA+AGG + chr3_4:2263330-2263349 Msa0484750:CDS 55.0%
CATGGTTCAGAGTTCGGCTG+AGG + chr3_4:2265165-2265184 Msa0484750:intron 55.0%
GCGTTCGATTCCAATGTCCG+TGG + chr3_4:2265542-2265561 Msa0484750:intron 55.0%
GCGGAATGATCGGATGTGCA+AGG - chr3_4:2265760-2265779 None:intergenic 55.0%
CGCAATCCCGACATTTGAGG+CGG - chr3_4:2265779-2265798 None:intergenic 55.0%
! TTTCGTGTTGCTGAGCGACG+AGG + chr3_4:2265822-2265841 Msa0484750:intron 55.0%
! TTCGTGTTGCTGAGCGACGA+GGG + chr3_4:2265823-2265842 Msa0484750:intron 55.0%
GCAGAGAGGAAGCCGATTGT+TGG + chr3_4:2266184-2266203 Msa0484750:intron 55.0%
GAAGCCGATTGTTGGACGGA+GGG + chr3_4:2266192-2266211 Msa0484750:intron 55.0%
! CGACATGTAGGAGCGCATCT+TGG - chr3_4:2266795-2266814 None:intergenic 55.0%
CACAAAGGTTGGGAGGAGCT+AGG - chr3_4:2267018-2267037 None:intergenic 55.0%
! GGCTCTTTGGATAGGGGTGT+AGG + chr3_4:2267642-2267661 Msa0484750:intron 55.0%
CTCATAGACCCCCTTGTACC+AGG + chr3_4:2267683-2267702 Msa0484750:intron 55.0%
AGAGTAGGCCTGGTACAAGG+GGG - chr3_4:2267694-2267713 None:intergenic 55.0%
CCCTTATCCCACCCATACCT+GGG - chr3_4:2268198-2268217 None:intergenic 55.0%
CCCAGGTATGGGTGGGATAA+GGG + chr3_4:2268195-2268214 Msa0484750:CDS 55.0%
ACCCTTATCCCACCCATACC+TGG - chr3_4:2268199-2268218 None:intergenic 55.0%
GGTATGGGTGGGATAAGGGT+TGG + chr3_4:2268199-2268218 Msa0484750:CDS 55.0%
TACGGGGGGGCCTATGAGAA+AGG - chr3_4:2262836-2262855 None:intergenic 60.0%
TAGAGTAGGCCTGGTACGGG+GGG - chr3_4:2262850-2262869 None:intergenic 60.0%
CTAGAGTAGGCCTGGTACGG+GGG - chr3_4:2262851-2262870 None:intergenic 60.0%
GTGTTTGTGCGGGGTTCACG+TGG - chr3_4:2264679-2264698 None:intergenic 60.0%
GCGAGAACGGAGAGCCACAA+TGG - chr3_4:2265669-2265688 None:intergenic 60.0%
GGAAGCCGATTGTTGGACGG+AGG + chr3_4:2266191-2266210 Msa0484750:intron 60.0%
AGGTTCAGCCCAGGTATGGG+TGG + chr3_4:2268187-2268206 Msa0484750:intron 60.0%
GGTTCAGCCCAGGTATGGGT+GGG + chr3_4:2268188-2268207 Msa0484750:intron 60.0%
GCCCAGGTATGGGTGGGATA+AGG + chr3_4:2268194-2268213 Msa0484750:CDS 60.0%
AGAGTAGGCCTGGTACGGGG+GGG - chr3_4:2262849-2262868 None:intergenic 65.0%
GGGGTCACGCGTGAGCATGA+CGG - chr3_4:2265736-2265755 None:intergenic 65.0%
CTCATAGGCCCCCCCGTACC+AGG + chr3_4:2262838-2262857 Msa0484750:intron 70.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 2260704 2268725 2260704 ID=Msa0484750;Name=Msa0484750
chr3_4 mRNA 2260704 2268725 2260704 ID=Msa0484750-mRNA-1;Parent=Msa0484750;Name=Msa0484750-mRNA-1;_AED=0.28;_eAED=0.28;_QI=859|0|0.5|0.66|0|0.5|6|413|183
chr3_4 exon 2260704 2261623 2260704 ID=Msa0484750-mRNA-1:exon:772;Parent=Msa0484750-mRNA-1
chr3_4 exon 2263022 2263064 2263022 ID=Msa0484750-mRNA-1:exon:773;Parent=Msa0484750-mRNA-1
chr3_4 exon 2263325 2263454 2263325 ID=Msa0484750-mRNA-1:exon:774;Parent=Msa0484750-mRNA-1
chr3_4 exon 2266306 2266452 2266306 ID=Msa0484750-mRNA-1:exon:775;Parent=Msa0484750-mRNA-1
chr3_4 exon 2267777 2267823 2267777 ID=Msa0484750-mRNA-1:exon:776;Parent=Msa0484750-mRNA-1
chr3_4 exon 2268189 2268725 2268189 ID=Msa0484750-mRNA-1:exon:777;Parent=Msa0484750-mRNA-1
chr3_4 five_prime_UTR 2260704 2261562 2260704 ID=Msa0484750-mRNA-1:five_prime_utr;Parent=Msa0484750-mRNA-1
chr3_4 CDS 2261563 2261623 2261563 ID=Msa0484750-mRNA-1:cds;Parent=Msa0484750-mRNA-1
chr3_4 CDS 2263022 2263064 2263022 ID=Msa0484750-mRNA-1:cds;Parent=Msa0484750-mRNA-1
chr3_4 CDS 2263325 2263454 2263325 ID=Msa0484750-mRNA-1:cds;Parent=Msa0484750-mRNA-1
chr3_4 CDS 2266306 2266452 2266306 ID=Msa0484750-mRNA-1:cds;Parent=Msa0484750-mRNA-1
chr3_4 CDS 2267777 2267823 2267777 ID=Msa0484750-mRNA-1:cds;Parent=Msa0484750-mRNA-1
chr3_4 CDS 2268189 2268312 2268189 ID=Msa0484750-mRNA-1:cds;Parent=Msa0484750-mRNA-1
chr3_4 three_prime_UTR 2268313 2268725 2268313 ID=Msa0484750-mRNA-1:three_prime_utr;Parent=Msa0484750-mRNA-1
Gene Sequence

>Msa0484750

ATGCAAATATTGTTGTGTCCAAGGGGCTCTCCTACATGTCAAATTTTATTTGTTGAGGAAGTTCCTAACCAGCATGACAATGTTGTGCTTTTAGCTTTGATGTGGTTCAGCCCATGTATGGGTGAGACAAGGCTTGGTTGTTGTTGGTTTAGGATCAGCCCTAAACTATCAAGATTAACCAACAAGATCAGGCAGCCAATAGTGGTCAAGCTGCACAAAAATCGGCTTGCTATGATGCACAAGCAACAATGTCACACTTTTCGTAACTTAACTCACCTCGAGCTTGGGCTTATCTTTGCGTCCAATTGGCATACCAATTTGAACTGCTTGATAGAAGTGCTACGAGATTGTCCAAAGCTTGAGAATCTTACCCTTCATGAGGTGTCTCATAAACGAGGCTATTCTCAGGAAGCATATGGGAAGTTTATGTTCAGCCCAGGTATGGGTGGGATAAGGGTTGGTTGTTCTGGTTGTAGGTTCAGCCCCAAACTATTAAGATTAACCAACAAGAAGAGTGGTCAAGCTGCACAAAAATCATTTTGCTGTGGTTAA
Protein sequence

>Msa0484750

MQILLCPRGSPTCQILFVEEVPNQHDNVVLLALMWFSPCMGETRLGCCWFRISPKLSRLTNKIRQPIVVKLHKNRLAMMHKQQCHTFRNLTHLELGLIFASNWHTNLNCLIEVLRDCPKLENLTLHEVSHKRGYSQEAYGKFMFSPGMGGIRVGCSGCRFSPKLLRLTNKKSGQAAQKSFCCG*