Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0487250 | XP_013452513.1 | 96.000 | 325 | 13 | 0 | 1 | 325 | 1 | 325 | 0.0 | 649 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0487250 | sp|Q9LVB8|CXE20_ARATH | 51.084 | 323 | 154 | 3 | 7 | 326 | 4 | 325 | 1.48e-115 | 340 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0487250 | A0A072UAU3 | 96.000 | 325 | 13 | 0 | 1 | 325 | 1 | 325 | 0.0 | 649 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0151220 | Msa0487250 | 0.817058 | 4.015686e-52 | -8.615850e-47 |
| Msa0225840 | Msa0487250 | 0.815048 | 1.128840e-51 | -8.615850e-47 |
| Msa0260530 | Msa0487250 | 0.828536 | 8.512027e-55 | -8.615850e-47 |
| Msa0487250 | Msa0615210 | 0.811498 | 6.794290e-51 | -8.615850e-47 |
| Msa0487250 | Msa1420930 | 0.824505 | 7.782483e-54 | -8.615850e-47 |
| Msa0487250 | Msa1446070 | 0.915401 | 6.151302e-85 | -8.615850e-47 |
| Msa0487250 | Msa1452540 | 0.803902 | 2.792789e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0487250 | MtrunA17_Chr6g0474491 | 96.000 | 325 | 13 | 0 | 1 | 325 | 1 | 325 | 0.0 | 649 |
| Msa0487250 | MtrunA17_Chr6g0474471 | 84.848 | 330 | 49 | 1 | 1 | 329 | 1 | 330 | 0.0 | 578 |
| Msa0487250 | MtrunA17_Chr6g0474411 | 67.890 | 327 | 98 | 5 | 2 | 325 | 5 | 327 | 2.22e-159 | 448 |
| Msa0487250 | MtrunA17_Chr1g0204201 | 52.711 | 332 | 146 | 4 | 1 | 326 | 1 | 327 | 3.14e-115 | 336 |
| Msa0487250 | MtrunA17_Chr6g0474541 | 55.663 | 309 | 131 | 5 | 7 | 314 | 36 | 339 | 2.72e-112 | 330 |
| Msa0487250 | MtrunA17_Chr1g0204211 | 52.229 | 314 | 141 | 3 | 12 | 323 | 31 | 337 | 1.37e-109 | 322 |
| Msa0487250 | MtrunA17_Chr6g0474631 | 49.085 | 328 | 157 | 5 | 2 | 326 | 6 | 326 | 6.44e-102 | 302 |
| Msa0487250 | MtrunA17_Chr8g0351201 | 48.802 | 334 | 155 | 5 | 2 | 328 | 4 | 328 | 1.26e-101 | 301 |
| Msa0487250 | MtrunA17_Chr8g0351211 | 48.160 | 326 | 149 | 6 | 12 | 326 | 2 | 318 | 4.34e-97 | 290 |
| Msa0487250 | MtrunA17_Chr8g0351171 | 37.188 | 320 | 187 | 5 | 12 | 324 | 5 | 317 | 7.21e-74 | 230 |
| Msa0487250 | MtrunA17_Chr6g0477271 | 39.759 | 249 | 138 | 5 | 46 | 293 | 82 | 319 | 3.00e-54 | 181 |
| Msa0487250 | MtrunA17_Chr6g0474611 | 51.744 | 172 | 79 | 3 | 158 | 326 | 2 | 172 | 2.78e-52 | 170 |
| Msa0487250 | MtrunA17_Chr7g0214851 | 39.711 | 277 | 143 | 10 | 34 | 293 | 44 | 313 | 2.80e-52 | 176 |
| Msa0487250 | MtrunA17_Chr1g0210121 | 35.737 | 319 | 171 | 8 | 31 | 329 | 42 | 346 | 2.59e-50 | 171 |
| Msa0487250 | MtrunA17_Chr6g0477251 | 35.806 | 310 | 184 | 6 | 24 | 325 | 586 | 888 | 3.87e-50 | 178 |
| Msa0487250 | MtrunA17_Chr6g0477251 | 34.615 | 312 | 189 | 6 | 24 | 327 | 32 | 336 | 3.74e-48 | 173 |
| Msa0487250 | MtrunA17_Chr6g0477231 | 36.691 | 278 | 158 | 6 | 24 | 290 | 30 | 300 | 4.99e-50 | 169 |
| Msa0487250 | MtrunA17_Chr6g0477161 | 35.691 | 311 | 184 | 6 | 24 | 325 | 381 | 684 | 1.26e-49 | 176 |
| Msa0487250 | MtrunA17_Chr6g0477161 | 34.768 | 302 | 185 | 5 | 30 | 326 | 42 | 336 | 8.24e-48 | 171 |
| Msa0487250 | MtrunA17_Chr4g0045181 | 33.779 | 299 | 172 | 9 | 38 | 325 | 35 | 318 | 1.65e-42 | 149 |
| Msa0487250 | MtrunA17_Chr6g0477241 | 36.620 | 213 | 125 | 4 | 24 | 229 | 43 | 252 | 2.35e-41 | 146 |
| Msa0487250 | MtrunA17_Chr7g0268091 | 37.743 | 257 | 139 | 8 | 80 | 324 | 69 | 316 | 7.46e-41 | 145 |
| Msa0487250 | MtrunA17_Chr4g0025291 | 32.915 | 319 | 192 | 10 | 19 | 327 | 12 | 318 | 1.75e-40 | 144 |
| Msa0487250 | MtrunA17_Chr7g0235741 | 33.333 | 297 | 176 | 9 | 38 | 325 | 67 | 350 | 1.97e-40 | 145 |
| Msa0487250 | MtrunA17_Chr1g0149271 | 33.465 | 254 | 156 | 5 | 38 | 290 | 29 | 270 | 6.35e-38 | 137 |
| Msa0487250 | MtrunA17_Chr4g0045131 | 33.557 | 298 | 169 | 11 | 38 | 324 | 75 | 354 | 7.82e-36 | 132 |
| Msa0487250 | MtrunA17_Chr4g0045121 | 34.109 | 258 | 149 | 8 | 38 | 290 | 38 | 279 | 2.12e-34 | 128 |
| Msa0487250 | MtrunA17_Chr3g0133701 | 31.731 | 312 | 159 | 10 | 38 | 325 | 34 | 315 | 5.52e-33 | 124 |
| Msa0487250 | MtrunA17_Chr1g0196311 | 37.156 | 218 | 123 | 6 | 78 | 293 | 119 | 324 | 6.88e-33 | 125 |
| Msa0487250 | MtrunA17_Chr7g0259161 | 33.871 | 248 | 137 | 6 | 62 | 293 | 78 | 314 | 2.06e-32 | 123 |
| Msa0487250 | MtrunA17_Chr4g0045191 | 29.373 | 303 | 176 | 8 | 27 | 325 | 34 | 302 | 9.21e-31 | 118 |
| Msa0487250 | MtrunA17_Chr1g0191301 | 30.962 | 239 | 136 | 7 | 23 | 244 | 37 | 263 | 6.20e-30 | 116 |
| Msa0487250 | MtrunA17_Chr3g0081521 | 34.225 | 187 | 112 | 3 | 62 | 243 | 74 | 254 | 9.05e-29 | 113 |
| Msa0487250 | MtrunA17_Chr1g0205871 | 31.333 | 300 | 178 | 11 | 40 | 327 | 38 | 321 | 6.37e-27 | 108 |
| Msa0487250 | MtrunA17_Chr3g0095711 | 30.312 | 320 | 183 | 13 | 26 | 324 | 68 | 368 | 1.44e-26 | 108 |
| Msa0487250 | MtrunA17_Chr5g0394251 | 28.617 | 311 | 181 | 12 | 32 | 324 | 43 | 330 | 2.08e-26 | 107 |
| Msa0487250 | MtrunA17_Chr5g0394211 | 28.349 | 321 | 192 | 12 | 24 | 324 | 56 | 358 | 2.75e-25 | 104 |
| Msa0487250 | MtrunA17_Chr8g0353951 | 28.205 | 312 | 181 | 11 | 24 | 321 | 29 | 311 | 4.12e-25 | 103 |
| Msa0487250 | MtrunA17_Chr6g0458881 | 30.396 | 227 | 118 | 5 | 77 | 263 | 157 | 383 | 3.58e-24 | 102 |
| Msa0487250 | MtrunA17_Chr5g0394241 | 30.457 | 197 | 117 | 6 | 21 | 204 | 18 | 207 | 6.03e-24 | 100 |
| Msa0487250 | MtrunA17_Chr7g0228721 | 29.442 | 197 | 98 | 1 | 78 | 233 | 163 | 359 | 5.15e-22 | 96.3 |
| Msa0487250 | MtrunA17_Chr7g0233871 | 30.915 | 317 | 187 | 13 | 24 | 324 | 25 | 325 | 6.10e-21 | 91.7 |
| Msa0487250 | MtrunA17_Chr1g0205781 | 34.409 | 186 | 104 | 5 | 24 | 201 | 25 | 200 | 1.27e-20 | 90.9 |
| Msa0487250 | MtrunA17_Chr1g0205791 | 36.196 | 163 | 85 | 4 | 48 | 201 | 46 | 198 | 3.51e-18 | 84.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0487250 | AT5G62180.1 | 51.084 | 323 | 154 | 3 | 7 | 326 | 4 | 325 | 1.51e-116 | 340 |
| Msa0487250 | AT2G45600.1 | 43.976 | 332 | 156 | 6 | 7 | 326 | 4 | 317 | 1.02e-91 | 277 |
| Msa0487250 | AT2G45610.1 | 40.854 | 328 | 175 | 6 | 8 | 325 | 6 | 324 | 1.99e-78 | 243 |
| Msa0487250 | AT5G16080.1 | 37.175 | 269 | 146 | 7 | 34 | 293 | 51 | 305 | 1.06e-47 | 164 |
| Msa0487250 | AT5G23530.1 | 33.657 | 309 | 186 | 7 | 21 | 324 | 32 | 326 | 3.63e-47 | 162 |
| Msa0487250 | AT1G68620.1 | 36.333 | 300 | 174 | 7 | 34 | 328 | 46 | 333 | 3.71e-46 | 160 |
| Msa0487250 | AT1G19190.1 | 32.734 | 278 | 156 | 5 | 24 | 290 | 18 | 275 | 5.97e-39 | 140 |
| Msa0487250 | AT1G49640.1 | 38.788 | 165 | 97 | 3 | 39 | 203 | 34 | 194 | 2.94e-36 | 133 |
| Msa0487250 | AT5G06570.1 | 35.254 | 295 | 165 | 9 | 46 | 327 | 47 | 328 | 2.35e-35 | 131 |
| Msa0487250 | AT5G06570.2 | 35.254 | 295 | 165 | 9 | 46 | 327 | 47 | 328 | 2.35e-35 | 131 |
| Msa0487250 | AT5G06570.3 | 35.254 | 295 | 165 | 9 | 46 | 327 | 62 | 343 | 2.91e-35 | 131 |
| Msa0487250 | AT5G06570.4 | 35.254 | 295 | 165 | 9 | 46 | 327 | 62 | 343 | 2.91e-35 | 131 |
| Msa0487250 | AT3G48700.1 | 38.953 | 172 | 97 | 2 | 38 | 201 | 32 | 203 | 6.28e-34 | 127 |
| Msa0487250 | AT5G27320.1 | 34.615 | 234 | 125 | 7 | 23 | 240 | 37 | 258 | 2.39e-32 | 123 |
| Msa0487250 | AT1G47480.1 | 29.195 | 298 | 187 | 8 | 38 | 329 | 35 | 314 | 7.38e-32 | 121 |
| Msa0487250 | AT3G63010.1 | 35.023 | 217 | 129 | 4 | 78 | 293 | 104 | 309 | 3.80e-31 | 120 |
| Msa0487250 | AT3G48690.1 | 35.165 | 182 | 108 | 3 | 27 | 201 | 21 | 199 | 4.02e-30 | 117 |
| Msa0487250 | AT1G49660.1 | 36.628 | 172 | 100 | 4 | 39 | 205 | 33 | 200 | 4.14e-30 | 117 |
| Msa0487250 | AT1G49650.1 | 34.759 | 187 | 111 | 5 | 25 | 205 | 74 | 255 | 1.17e-28 | 114 |
| Msa0487250 | AT3G05120.1 | 31.381 | 239 | 144 | 5 | 19 | 244 | 33 | 264 | 2.23e-26 | 107 |
| Msa0487250 | AT2G03550.1 | 33.333 | 180 | 107 | 3 | 27 | 201 | 21 | 192 | 9.63e-26 | 105 |
| Msa0487250 | AT5G14310.1 | 31.282 | 195 | 97 | 1 | 76 | 233 | 147 | 341 | 1.99e-25 | 106 |
| Msa0487250 | AT3G27320.2 | 29.902 | 204 | 102 | 4 | 69 | 233 | 123 | 324 | 1.58e-23 | 100 |
| Msa0487250 | AT3G27320.1 | 29.902 | 204 | 102 | 4 | 69 | 233 | 155 | 356 | 1.92e-23 | 100 |
Find 73 sgRNAs with CRISPR-Local
Find 186 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCTCTTCCTTTGATGCTT+AGG | 0.247342 | 3_4:-5924908 | None:intergenic |
| CTCAATGAAATTCTTTGCTT+TGG | 0.269748 | 3_4:+5924945 | None:intergenic |
| ATCATGAGTATTCCAATCTA+AGG | 0.274329 | 3_4:-5925161 | Msa0487250:CDS |
| CTTGAGCCGTTGAAAATTCT+AGG | 0.274915 | 3_4:-5925321 | Msa0487250:CDS |
| GTGGTAGTAGCTTGTTGTTT+AGG | 0.299734 | 3_4:+5925655 | None:intergenic |
| ATCTCTTCCTTTGATGCTTA+GGG | 0.329295 | 3_4:-5924907 | None:intergenic |
| TAAGGAGTTGGTTAAATTGT+TGG | 0.354633 | 3_4:-5925040 | Msa0487250:CDS |
| TCCATTGGTTGATCGTAATA+AGG | 0.354913 | 3_4:-5925058 | Msa0487250:CDS |
| TGGAAGCATTGAGTTTGATT+AGG | 0.366794 | 3_4:-5925467 | Msa0487250:CDS |
| TGTTTGGTTTGATTGGTTGA+TGG | 0.372466 | 3_4:+5925722 | None:intergenic |
| ACCATTCCCAACCCTTAGAT+TGG | 0.372685 | 3_4:+5925149 | None:intergenic |
| TTGGTTGATGGTGAGATCTT+TGG | 0.375462 | 3_4:+5925734 | None:intergenic |
| ATGAAATTCTTTGCTTTGGA+TGG | 0.390861 | 3_4:+5924949 | None:intergenic |
| GGAATAATCGAAGCCATGTT+TGG | 0.417087 | 3_4:+5925706 | None:intergenic |
| GGTTAAATTGTTGGAGGAGA+AGG | 0.419389 | 3_4:-5925031 | Msa0487250:CDS |
| GTGAGATCTTTGGTTAGAAC+AGG | 0.425005 | 3_4:+5925744 | None:intergenic |
| TGATCACGTTTAACACCAAT+TGG | 0.432249 | 3_4:+5925180 | None:intergenic |
| GCCGCCGGTAGCCGGTGCTC+CGG | 0.443546 | 3_4:+5925504 | None:intergenic |
| TAACTCTGACTCAGTCCTAT+TGG | 0.451589 | 3_4:+5925266 | None:intergenic |
| CATCATATGCCGCCGGTAGC+CGG | 0.451594 | 3_4:+5925496 | None:intergenic |
| AGGGTGTTGGTGAGTATGAA+TGG | 0.462381 | 3_4:-5925087 | Msa0487250:CDS |
| GAAGCCATGTTTGGTTTGAT+TGG | 0.466485 | 3_4:+5925715 | None:intergenic |
| GAAGGGTGTGGAAGTGGTGA+AGG | 0.466496 | 3_4:-5925013 | Msa0487250:CDS |
| AGTATTCCAATCTAAGGGTT+GGG | 0.474229 | 3_4:-5925155 | Msa0487250:CDS |
| GTTAAATTGTTGGAGGAGAA+GGG | 0.476633 | 3_4:-5925030 | Msa0487250:CDS |
| CGCACCGGAGCACCGGCTAC+CGG | 0.478223 | 3_4:-5925508 | Msa0487250:CDS |
| GGAGGAGAAGGGTGTGGAAG+TGG | 0.478996 | 3_4:-5925019 | Msa0487250:CDS |
| ATTTCGAGTGAGTGTGTCGT+TGG | 0.480802 | 3_4:+5925809 | None:intergenic |
| TTTCGAGTGAGTGTGTCGTT+GGG | 0.483203 | 3_4:+5925810 | None:intergenic |
| TTTCTAATGGGAAATAGTGC+TGG | 0.493645 | 3_4:-5925396 | Msa0487250:CDS |
| ATCGCCTCGCACCGGAGCAC+CGG | 0.497130 | 3_4:-5925515 | Msa0487250:CDS |
| GTGTGTTAGTGATTTGATGT+GGG | 0.504249 | 3_4:-5925214 | Msa0487250:CDS |
| GGTTGATCGTAATAAGGAGT+TGG | 0.507526 | 3_4:-5925052 | Msa0487250:CDS |
| TGGGAGTTAGCGTTACCAAT+TGG | 0.507682 | 3_4:-5925195 | Msa0487250:CDS |
| CGTCGAAGCAGTTGTCGCCT+CGG | 0.508826 | 3_4:-5925544 | Msa0487250:CDS |
| GGAGTTGGTTAAATTGTTGG+AGG | 0.511533 | 3_4:-5925037 | Msa0487250:CDS |
| ATTGTTGGAGGAGAAGGGTG+TGG | 0.514825 | 3_4:-5925025 | Msa0487250:CDS |
| CGAGGCGACAACTGCTTCGA+CGG | 0.523045 | 3_4:+5925545 | None:intergenic |
| AGGACTACGTGTAGTTCAAA+AGG | 0.533022 | 3_4:-5925352 | Msa0487250:CDS |
| CCATGAAAGAAAACAATAAG+TGG | 0.534559 | 3_4:+5925636 | None:intergenic |
| GGAAGAGAAGTGTCTAATGA+AGG | 0.545290 | 3_4:+5925765 | None:intergenic |
| TGTGTGTTAGTGATTTGATG+TGG | 0.546036 | 3_4:-5925215 | Msa0487250:CDS |
| TTGAGCCGTTGAAAATTCTA+GGG | 0.552613 | 3_4:-5925320 | Msa0487250:CDS |
| GAGTATTCCAATCTAAGGGT+TGG | 0.553194 | 3_4:-5925156 | Msa0487250:CDS |
| CAAAGCAAAGAATTTCATTG+AGG | 0.554638 | 3_4:-5924944 | Msa0487250:CDS |
| GTATTGGTAAGGATCGTTGA+TGG | 0.563167 | 3_4:+5925851 | None:intergenic |
| TATTGGTAAGGATCGTTGAT+GGG | 0.563262 | 3_4:+5925852 | None:intergenic |
| GGTCGATTATCGCCTCGCAC+CGG | 0.575927 | 3_4:-5925523 | Msa0487250:CDS |
| GTAGCCGGTGCTCCGGTGCG+AGG | 0.576122 | 3_4:+5925511 | None:intergenic |
| GCTACAATTGCATATCATGC+AGG | 0.576937 | 3_4:-5925372 | Msa0487250:CDS |
| TAAGGATCGTTGATGGGTGG+TGG | 0.577562 | 3_4:+5925858 | None:intergenic |
| GGCGGCATATGATGATGCTA+TGG | 0.579015 | 3_4:-5925487 | Msa0487250:CDS |
| TTAGGTCAAGTGATGATGAA+TGG | 0.579905 | 3_4:-5925449 | Msa0487250:CDS |
| TCCAATCTAAGGGTTGGGAA+TGG | 0.580920 | 3_4:-5925150 | Msa0487250:CDS |
| AGAAGTGTCTAATGAAGGTG+AGG | 0.582650 | 3_4:+5925770 | None:intergenic |
| GGATCATGAGTGGAGGGTGT+TGG | 0.586722 | 3_4:-5925100 | Msa0487250:CDS |
| ATATTGACCCTAAGCATCAA+AGG | 0.589799 | 3_4:+5924900 | None:intergenic |
| TATGAATGGTGGAGATCCAT+TGG | 0.590004 | 3_4:-5925073 | Msa0487250:CDS |
| TGGCAAAGTTTGATTTGACA+TGG | 0.596760 | 3_4:+5925878 | None:intergenic |
| ACCGGAGCACCGGCTACCGG+CGG | 0.597839 | 3_4:-5925505 | Msa0487250:CDS |
| AGATTAAGGATCATGAGTGG+AGG | 0.598392 | 3_4:-5925107 | Msa0487250:CDS |
| GATTAAGGATCATGAGTGGA+GGG | 0.601559 | 3_4:-5925106 | Msa0487250:CDS |
| TCAACCAATCAAACCAAACA+TGG | 0.608131 | 3_4:-5925719 | Msa0487250:CDS |
| TGGTAAGGATCGTTGATGGG+TGG | 0.610868 | 3_4:+5925855 | None:intergenic |
| TCATGAGTATTCCAATCTAA+GGG | 0.620597 | 3_4:-5925160 | Msa0487250:CDS |
| ATCAAATCACTAACACACAA+AGG | 0.629463 | 3_4:+5925219 | None:intergenic |
| TCCTTATTACGATCAACCAA+TGG | 0.629948 | 3_4:+5925057 | None:intergenic |
| CTAAGATTAAGGATCATGAG+TGG | 0.641493 | 3_4:-5925110 | Msa0487250:CDS |
| ATAGCATCATCATATGCCGC+CGG | 0.642105 | 3_4:+5925489 | None:intergenic |
| TCTAATGAAGGTGAGGTGTG+TGG | 0.664418 | 3_4:+5925777 | None:intergenic |
| AAAATTGTGGAACATAGTGG+AGG | 0.668304 | 3_4:+5925587 | None:intergenic |
| GTGTTGGTGAGTATGAATGG+TGG | 0.677117 | 3_4:-5925084 | Msa0487250:CDS |
| TGCGAGGCGATAATCGACCG+AGG | 0.723884 | 3_4:+5925527 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTCAAAATGTTTTCTAAT+GGG | - | chr3_4:5925377-5925396 | Msa0487250:CDS | 15.0% |
| !!! | TTTTCAAAATGTTTTCTAAT+GGG | - | chr3_4:5925377-5925396 | Msa0487250:CDS | 15.0% |
| !!! | CTTTTCAAAATGTTTTCTAA+TGG | - | chr3_4:5925376-5925395 | Msa0487250:CDS | 20.0% |
| !!! | CTTTTCAAAATGTTTTCTAA+TGG | - | chr3_4:5925376-5925395 | Msa0487250:CDS | 20.0% |
| !!! | GAAACATTTGTTGCTTTTTT+AGG | + | chr3_4:5925107-5925126 | None:intergenic | 25.0% |
| !!! | TGAAAAACTTGCTAAGATTA+AGG | - | chr3_4:5925664-5925683 | Msa0487250:CDS | 25.0% |
| !!! | GAAACATTTGTTGCTTTTTT+AGG | + | chr3_4:5925107-5925126 | None:intergenic | 25.0% |
| !!! | TGAAAAACTTGCTAAGATTA+AGG | - | chr3_4:5925664-5925683 | Msa0487250:CDS | 25.0% |
| !! | TGAATTTTGACGTATTGGTA+AGG | + | chr3_4:5924948-5924967 | None:intergenic | 30.0% |
| !! | TGTGTTGAATTTTGACGTAT+TGG | + | chr3_4:5924953-5924972 | None:intergenic | 30.0% |
| !!! | CATTTGTTGCTTTTTTAGGT+AGG | + | chr3_4:5925103-5925122 | None:intergenic | 30.0% |
| CCATGAAAGAAAACAATAAG+TGG | + | chr3_4:5925152-5925171 | None:intergenic | 30.0% | |
| ! | CCACTTATTGTTTTCTTTCA+TGG | - | chr3_4:5925149-5925168 | Msa0487250:CDS | 30.0% |
| ! | ATTGTTTTCTTTCATGGAAG+TGG | - | chr3_4:5925155-5925174 | Msa0487250:CDS | 30.0% |
| ACAAAAATTGTGGAACATAG+TGG | + | chr3_4:5925204-5925223 | None:intergenic | 30.0% | |
| CCATTTCAGAACAAAAATTG+TGG | + | chr3_4:5925214-5925233 | None:intergenic | 30.0% | |
| !!! | CCACAATTTTTGTTCTGAAA+TGG | - | chr3_4:5925211-5925230 | Msa0487250:CDS | 30.0% |
| !!! | CAATTTTTGTTCTGAAATGG+CGG | - | chr3_4:5925214-5925233 | Msa0487250:CDS | 30.0% |
| ! | ATCATCCCTAGAATTTTCAA+CGG | + | chr3_4:5925473-5925492 | None:intergenic | 30.0% |
| !!! | ATATTGCGTCAACCATTTTT+TGG | - | chr3_4:5925491-5925510 | Msa0487250:CDS | 30.0% |
| ATCAAATCACTAACACACAA+AGG | + | chr3_4:5925569-5925588 | None:intergenic | 30.0% | |
| ATCATGAGTATTCCAATCTA+AGG | - | chr3_4:5925624-5925643 | Msa0487250:CDS | 30.0% | |
| TCATGAGTATTCCAATCTAA+GGG | - | chr3_4:5925625-5925644 | Msa0487250:CDS | 30.0% | |
| ! | TAAGGAGTTGGTTAAATTGT+TGG | - | chr3_4:5925745-5925764 | Msa0487250:CDS | 30.0% |
| ! | TTTCAAGAAGATGGTTTTCA+TGG | - | chr3_4:5925797-5925816 | Msa0487250:CDS | 30.0% |
| ! | TTCAAGAAGATGGTTTTCAT+GGG | - | chr3_4:5925798-5925817 | Msa0487250:CDS | 30.0% |
| ! | ATGAAATTCTTTGCTTTGGA+TGG | + | chr3_4:5925839-5925858 | None:intergenic | 30.0% |
| CTCAATGAAATTCTTTGCTT+TGG | + | chr3_4:5925843-5925862 | None:intergenic | 30.0% | |
| CAAAGCAAAGAATTTCATTG+AGG | - | chr3_4:5925841-5925860 | Msa0487250:CDS | 30.0% | |
| !! | TGAATTTTGACGTATTGGTA+AGG | + | chr3_4:5924948-5924967 | None:intergenic | 30.0% |
| !! | TGTGTTGAATTTTGACGTAT+TGG | + | chr3_4:5924953-5924972 | None:intergenic | 30.0% |
| !!! | CATTTGTTGCTTTTTTAGGT+AGG | + | chr3_4:5925103-5925122 | None:intergenic | 30.0% |
| CCATGAAAGAAAACAATAAG+TGG | + | chr3_4:5925152-5925171 | None:intergenic | 30.0% | |
| ! | CCACTTATTGTTTTCTTTCA+TGG | - | chr3_4:5925149-5925168 | Msa0487250:CDS | 30.0% |
| ! | ATTGTTTTCTTTCATGGAAG+TGG | - | chr3_4:5925155-5925174 | Msa0487250:CDS | 30.0% |
| ACAAAAATTGTGGAACATAG+TGG | + | chr3_4:5925204-5925223 | None:intergenic | 30.0% | |
| CCATTTCAGAACAAAAATTG+TGG | + | chr3_4:5925214-5925233 | None:intergenic | 30.0% | |
| !!! | CCACAATTTTTGTTCTGAAA+TGG | - | chr3_4:5925211-5925230 | Msa0487250:CDS | 30.0% |
| !!! | CAATTTTTGTTCTGAAATGG+CGG | - | chr3_4:5925214-5925233 | Msa0487250:CDS | 30.0% |
| ! | ATCATCCCTAGAATTTTCAA+CGG | + | chr3_4:5925473-5925492 | None:intergenic | 30.0% |
| !!! | ATATTGCGTCAACCATTTTT+TGG | - | chr3_4:5925491-5925510 | Msa0487250:CDS | 30.0% |
| ATCAAATCACTAACACACAA+AGG | + | chr3_4:5925569-5925588 | None:intergenic | 30.0% | |
| ATCATGAGTATTCCAATCTA+AGG | - | chr3_4:5925624-5925643 | Msa0487250:CDS | 30.0% | |
| TCATGAGTATTCCAATCTAA+GGG | - | chr3_4:5925625-5925644 | Msa0487250:CDS | 30.0% | |
| ! | TAAGGAGTTGGTTAAATTGT+TGG | - | chr3_4:5925745-5925764 | Msa0487250:CDS | 30.0% |
| ! | TTTCAAGAAGATGGTTTTCA+TGG | - | chr3_4:5925797-5925816 | Msa0487250:CDS | 30.0% |
| ! | TTCAAGAAGATGGTTTTCAT+GGG | - | chr3_4:5925798-5925817 | Msa0487250:CDS | 30.0% |
| ! | ATGAAATTCTTTGCTTTGGA+TGG | + | chr3_4:5925839-5925858 | None:intergenic | 30.0% |
| CTCAATGAAATTCTTTGCTT+TGG | + | chr3_4:5925843-5925862 | None:intergenic | 30.0% | |
| CAAAGCAAAGAATTTCATTG+AGG | - | chr3_4:5925841-5925860 | Msa0487250:CDS | 30.0% | |
| TATTGGTAAGGATCGTTGAT+GGG | + | chr3_4:5924936-5924955 | None:intergenic | 35.0% | |
| !! | TGTTTGGTTTGATTGGTTGA+TGG | + | chr3_4:5925066-5925085 | None:intergenic | 35.0% |
| TCAACCAATCAAACCAAACA+TGG | - | chr3_4:5925066-5925085 | Msa0487250:CDS | 35.0% | |
| AAAATTGTGGAACATAGTGG+AGG | + | chr3_4:5925201-5925220 | None:intergenic | 35.0% | |
| !! | TGGAAGCATTGAGTTTGATT+AGG | - | chr3_4:5925318-5925337 | Msa0487250:CDS | 35.0% |
| ! | TTAGGTCAAGTGATGATGAA+TGG | - | chr3_4:5925336-5925355 | Msa0487250:CDS | 35.0% |
| TTTCTAATGGGAAATAGTGC+TGG | - | chr3_4:5925389-5925408 | Msa0487250:CDS | 35.0% | |
| TTGAGCCGTTGAAAATTCTA+GGG | - | chr3_4:5925465-5925484 | Msa0487250:CDS | 35.0% | |
| CTAACACACAAAGGAAAAAC+AGG | + | chr3_4:5925560-5925579 | None:intergenic | 35.0% | |
| TGTGTGTTAGTGATTTGATG+TGG | - | chr3_4:5925570-5925589 | Msa0487250:CDS | 35.0% | |
| GTGTGTTAGTGATTTGATGT+GGG | - | chr3_4:5925571-5925590 | Msa0487250:CDS | 35.0% | |
| TGATCACGTTTAACACCAAT+TGG | + | chr3_4:5925608-5925627 | None:intergenic | 35.0% | |
| AGTATTCCAATCTAAGGGTT+GGG | - | chr3_4:5925630-5925649 | Msa0487250:CDS | 35.0% | |
| CTAAGATTAAGGATCATGAG+TGG | - | chr3_4:5925675-5925694 | Msa0487250:CDS | 35.0% | |
| ! | TCCATTGGTTGATCGTAATA+AGG | - | chr3_4:5925727-5925746 | Msa0487250:CDS | 35.0% |
| TCCTTATTACGATCAACCAA+TGG | + | chr3_4:5925731-5925750 | None:intergenic | 35.0% | |
| GTTAAATTGTTGGAGGAGAA+GGG | - | chr3_4:5925755-5925774 | Msa0487250:CDS | 35.0% | |
| !! | GTGAAGGATTTTCAAGAAGA+TGG | - | chr3_4:5925788-5925807 | Msa0487250:CDS | 35.0% |
| ! | TCAAGAAGATGGTTTTCATG+GGG | - | chr3_4:5925799-5925818 | Msa0487250:CDS | 35.0% |
| TATTGGTAAGGATCGTTGAT+GGG | + | chr3_4:5924936-5924955 | None:intergenic | 35.0% | |
| !! | TGTTTGGTTTGATTGGTTGA+TGG | + | chr3_4:5925066-5925085 | None:intergenic | 35.0% |
| TCAACCAATCAAACCAAACA+TGG | - | chr3_4:5925066-5925085 | Msa0487250:CDS | 35.0% | |
| AAAATTGTGGAACATAGTGG+AGG | + | chr3_4:5925201-5925220 | None:intergenic | 35.0% | |
| !! | TGGAAGCATTGAGTTTGATT+AGG | - | chr3_4:5925318-5925337 | Msa0487250:CDS | 35.0% |
| ! | TTAGGTCAAGTGATGATGAA+TGG | - | chr3_4:5925336-5925355 | Msa0487250:CDS | 35.0% |
| TTTCTAATGGGAAATAGTGC+TGG | - | chr3_4:5925389-5925408 | Msa0487250:CDS | 35.0% | |
| TTGAGCCGTTGAAAATTCTA+GGG | - | chr3_4:5925465-5925484 | Msa0487250:CDS | 35.0% | |
| CTAACACACAAAGGAAAAAC+AGG | + | chr3_4:5925560-5925579 | None:intergenic | 35.0% | |
| TGTGTGTTAGTGATTTGATG+TGG | - | chr3_4:5925570-5925589 | Msa0487250:CDS | 35.0% | |
| GTGTGTTAGTGATTTGATGT+GGG | - | chr3_4:5925571-5925590 | Msa0487250:CDS | 35.0% | |
| TGATCACGTTTAACACCAAT+TGG | + | chr3_4:5925608-5925627 | None:intergenic | 35.0% | |
| AGTATTCCAATCTAAGGGTT+GGG | - | chr3_4:5925630-5925649 | Msa0487250:CDS | 35.0% | |
| CTAAGATTAAGGATCATGAG+TGG | - | chr3_4:5925675-5925694 | Msa0487250:CDS | 35.0% | |
| ! | TCCATTGGTTGATCGTAATA+AGG | - | chr3_4:5925727-5925746 | Msa0487250:CDS | 35.0% |
| TCCTTATTACGATCAACCAA+TGG | + | chr3_4:5925731-5925750 | None:intergenic | 35.0% | |
| GTTAAATTGTTGGAGGAGAA+GGG | - | chr3_4:5925755-5925774 | Msa0487250:CDS | 35.0% | |
| !! | GTGAAGGATTTTCAAGAAGA+TGG | - | chr3_4:5925788-5925807 | Msa0487250:CDS | 35.0% |
| ! | TCAAGAAGATGGTTTTCATG+GGG | - | chr3_4:5925799-5925818 | Msa0487250:CDS | 35.0% |
| ! | GTATTGGTAAGGATCGTTGA+TGG | + | chr3_4:5924937-5924956 | None:intergenic | 40.0% |
| !! | AGAAGTGTCTAATGAAGGTG+AGG | + | chr3_4:5925018-5925037 | None:intergenic | 40.0% |
| !! | GGAAGAGAAGTGTCTAATGA+AGG | + | chr3_4:5925023-5925042 | None:intergenic | 40.0% |
| GTGAGATCTTTGGTTAGAAC+AGG | + | chr3_4:5925044-5925063 | None:intergenic | 40.0% | |
| !! | TTGGTTGATGGTGAGATCTT+TGG | + | chr3_4:5925054-5925073 | None:intergenic | 40.0% |
| !! | GAAGCCATGTTTGGTTTGAT+TGG | + | chr3_4:5925073-5925092 | None:intergenic | 40.0% |
| GGAATAATCGAAGCCATGTT+TGG | + | chr3_4:5925082-5925101 | None:intergenic | 40.0% | |
| !! | GTGGTAGTAGCTTGTTGTTT+AGG | + | chr3_4:5925133-5925152 | None:intergenic | 40.0% |
| GCTACAATTGCATATCATGC+AGG | - | chr3_4:5925413-5925432 | Msa0487250:CDS | 40.0% | |
| AGGACTACGTGTAGTTCAAA+AGG | - | chr3_4:5925433-5925452 | Msa0487250:CDS | 40.0% | |
| CTTGAGCCGTTGAAAATTCT+AGG | - | chr3_4:5925464-5925483 | Msa0487250:CDS | 40.0% | |
| !!! | TTGCGTCAACCATTTTTTGG+TGG | - | chr3_4:5925494-5925513 | Msa0487250:CDS | 40.0% |
| !!! | TGCGTCAACCATTTTTTGGT+GGG | - | chr3_4:5925495-5925514 | Msa0487250:CDS | 40.0% |
| CTATTGGTCCCACCAAAAAA+TGG | + | chr3_4:5925506-5925525 | None:intergenic | 40.0% | |
| !!! | CATTTTTTGGTGGGACCAAT+AGG | - | chr3_4:5925504-5925523 | Msa0487250:CDS | 40.0% |
| TAACTCTGACTCAGTCCTAT+TGG | + | chr3_4:5925522-5925541 | None:intergenic | 40.0% | |
| GAGTATTCCAATCTAAGGGT+TGG | - | chr3_4:5925629-5925648 | Msa0487250:CDS | 40.0% | |
| AGATTAAGGATCATGAGTGG+AGG | - | chr3_4:5925678-5925697 | Msa0487250:CDS | 40.0% | |
| GATTAAGGATCATGAGTGGA+GGG | - | chr3_4:5925679-5925698 | Msa0487250:CDS | 40.0% | |
| ! | TATGAATGGTGGAGATCCAT+TGG | - | chr3_4:5925712-5925731 | Msa0487250:CDS | 40.0% |
| GGTTGATCGTAATAAGGAGT+TGG | - | chr3_4:5925733-5925752 | Msa0487250:CDS | 40.0% | |
| ! | GGAGTTGGTTAAATTGTTGG+AGG | - | chr3_4:5925748-5925767 | Msa0487250:CDS | 40.0% |
| GGTTAAATTGTTGGAGGAGA+AGG | - | chr3_4:5925754-5925773 | Msa0487250:CDS | 40.0% | |
| ! | GTATTGGTAAGGATCGTTGA+TGG | + | chr3_4:5924937-5924956 | None:intergenic | 40.0% |
| !! | AGAAGTGTCTAATGAAGGTG+AGG | + | chr3_4:5925018-5925037 | None:intergenic | 40.0% |
| !! | GGAAGAGAAGTGTCTAATGA+AGG | + | chr3_4:5925023-5925042 | None:intergenic | 40.0% |
| GTGAGATCTTTGGTTAGAAC+AGG | + | chr3_4:5925044-5925063 | None:intergenic | 40.0% | |
| !! | TTGGTTGATGGTGAGATCTT+TGG | + | chr3_4:5925054-5925073 | None:intergenic | 40.0% |
| !! | GAAGCCATGTTTGGTTTGAT+TGG | + | chr3_4:5925073-5925092 | None:intergenic | 40.0% |
| GGAATAATCGAAGCCATGTT+TGG | + | chr3_4:5925082-5925101 | None:intergenic | 40.0% | |
| !! | GTGGTAGTAGCTTGTTGTTT+AGG | + | chr3_4:5925133-5925152 | None:intergenic | 40.0% |
| GCTACAATTGCATATCATGC+AGG | - | chr3_4:5925413-5925432 | Msa0487250:CDS | 40.0% | |
| AGGACTACGTGTAGTTCAAA+AGG | - | chr3_4:5925433-5925452 | Msa0487250:CDS | 40.0% | |
| CTTGAGCCGTTGAAAATTCT+AGG | - | chr3_4:5925464-5925483 | Msa0487250:CDS | 40.0% | |
| !!! | TTGCGTCAACCATTTTTTGG+TGG | - | chr3_4:5925494-5925513 | Msa0487250:CDS | 40.0% |
| !!! | TGCGTCAACCATTTTTTGGT+GGG | - | chr3_4:5925495-5925514 | Msa0487250:CDS | 40.0% |
| CTATTGGTCCCACCAAAAAA+TGG | + | chr3_4:5925506-5925525 | None:intergenic | 40.0% | |
| !!! | CATTTTTTGGTGGGACCAAT+AGG | - | chr3_4:5925504-5925523 | Msa0487250:CDS | 40.0% |
| TAACTCTGACTCAGTCCTAT+TGG | + | chr3_4:5925522-5925541 | None:intergenic | 40.0% | |
| GAGTATTCCAATCTAAGGGT+TGG | - | chr3_4:5925629-5925648 | Msa0487250:CDS | 40.0% | |
| AGATTAAGGATCATGAGTGG+AGG | - | chr3_4:5925678-5925697 | Msa0487250:CDS | 40.0% | |
| GATTAAGGATCATGAGTGGA+GGG | - | chr3_4:5925679-5925698 | Msa0487250:CDS | 40.0% | |
| ! | TATGAATGGTGGAGATCCAT+TGG | - | chr3_4:5925712-5925731 | Msa0487250:CDS | 40.0% |
| GGTTGATCGTAATAAGGAGT+TGG | - | chr3_4:5925733-5925752 | Msa0487250:CDS | 40.0% | |
| ! | GGAGTTGGTTAAATTGTTGG+AGG | - | chr3_4:5925748-5925767 | Msa0487250:CDS | 40.0% |
| GGTTAAATTGTTGGAGGAGA+AGG | - | chr3_4:5925754-5925773 | Msa0487250:CDS | 40.0% | |
| ! | TTTCGAGTGAGTGTGTCGTT+GGG | + | chr3_4:5924978-5924997 | None:intergenic | 45.0% |
| ! | ATTTCGAGTGAGTGTGTCGT+TGG | + | chr3_4:5924979-5924998 | None:intergenic | 45.0% |
| TCTAATGAAGGTGAGGTGTG+TGG | + | chr3_4:5925011-5925030 | None:intergenic | 45.0% | |
| ATAGCATCATCATATGCCGC+CGG | + | chr3_4:5925299-5925318 | None:intergenic | 45.0% | |
| TGGGAGTTAGCGTTACCAAT+TGG | - | chr3_4:5925590-5925609 | Msa0487250:CDS | 45.0% | |
| TCCAATCTAAGGGTTGGGAA+TGG | - | chr3_4:5925635-5925654 | Msa0487250:CDS | 45.0% | |
| ACCATTCCCAACCCTTAGAT+TGG | + | chr3_4:5925639-5925658 | None:intergenic | 45.0% | |
| !! | AGGGTGTTGGTGAGTATGAA+TGG | - | chr3_4:5925698-5925717 | Msa0487250:CDS | 45.0% |
| ! | GTGTTGGTGAGTATGAATGG+TGG | - | chr3_4:5925701-5925720 | Msa0487250:CDS | 45.0% |
| ! | TTTCGAGTGAGTGTGTCGTT+GGG | + | chr3_4:5924978-5924997 | None:intergenic | 45.0% |
| ! | ATTTCGAGTGAGTGTGTCGT+TGG | + | chr3_4:5924979-5924998 | None:intergenic | 45.0% |
| TCTAATGAAGGTGAGGTGTG+TGG | + | chr3_4:5925011-5925030 | None:intergenic | 45.0% | |
| ATAGCATCATCATATGCCGC+CGG | + | chr3_4:5925299-5925318 | None:intergenic | 45.0% | |
| TGGGAGTTAGCGTTACCAAT+TGG | - | chr3_4:5925590-5925609 | Msa0487250:CDS | 45.0% | |
| TCCAATCTAAGGGTTGGGAA+TGG | - | chr3_4:5925635-5925654 | Msa0487250:CDS | 45.0% | |
| ACCATTCCCAACCCTTAGAT+TGG | + | chr3_4:5925639-5925658 | None:intergenic | 45.0% | |
| !! | AGGGTGTTGGTGAGTATGAA+TGG | - | chr3_4:5925698-5925717 | Msa0487250:CDS | 45.0% |
| ! | GTGTTGGTGAGTATGAATGG+TGG | - | chr3_4:5925701-5925720 | Msa0487250:CDS | 45.0% |
| ! | TAAGGATCGTTGATGGGTGG+TGG | + | chr3_4:5924930-5924949 | None:intergenic | 50.0% |
| ! | TGGTAAGGATCGTTGATGGG+TGG | + | chr3_4:5924933-5924952 | None:intergenic | 50.0% |
| ! | GGCGGCATATGATGATGCTA+TGG | - | chr3_4:5925298-5925317 | Msa0487250:CDS | 50.0% |
| ATTGTTGGAGGAGAAGGGTG+TGG | - | chr3_4:5925760-5925779 | Msa0487250:CDS | 50.0% | |
| ! | TAAGGATCGTTGATGGGTGG+TGG | + | chr3_4:5924930-5924949 | None:intergenic | 50.0% |
| ! | TGGTAAGGATCGTTGATGGG+TGG | + | chr3_4:5924933-5924952 | None:intergenic | 50.0% |
| ! | GGCGGCATATGATGATGCTA+TGG | - | chr3_4:5925298-5925317 | Msa0487250:CDS | 50.0% |
| ATTGTTGGAGGAGAAGGGTG+TGG | - | chr3_4:5925760-5925779 | Msa0487250:CDS | 50.0% | |
| ! | GGATCATGAGTGGAGGGTGT+TGG | - | chr3_4:5925685-5925704 | Msa0487250:CDS | 55.0% |
| ! | GAAGGGTGTGGAAGTGGTGA+AGG | - | chr3_4:5925772-5925791 | Msa0487250:CDS | 55.0% |
| ! | GGATCATGAGTGGAGGGTGT+TGG | - | chr3_4:5925685-5925704 | Msa0487250:CDS | 55.0% |
| ! | GAAGGGTGTGGAAGTGGTGA+AGG | - | chr3_4:5925772-5925791 | Msa0487250:CDS | 55.0% |
| CGAGGCGACAACTGCTTCGA+CGG | + | chr3_4:5925243-5925262 | None:intergenic | 60.0% | |
| CGTCGAAGCAGTTGTCGCCT+CGG | - | chr3_4:5925241-5925260 | Msa0487250:CDS | 60.0% | |
| TGCGAGGCGATAATCGACCG+AGG | + | chr3_4:5925261-5925280 | None:intergenic | 60.0% | |
| GGTCGATTATCGCCTCGCAC+CGG | - | chr3_4:5925262-5925281 | Msa0487250:CDS | 60.0% | |
| CATCATATGCCGCCGGTAGC+CGG | + | chr3_4:5925292-5925311 | None:intergenic | 60.0% | |
| ! | GGAGGAGAAGGGTGTGGAAG+TGG | - | chr3_4:5925766-5925785 | Msa0487250:CDS | 60.0% |
| CGAGGCGACAACTGCTTCGA+CGG | + | chr3_4:5925243-5925262 | None:intergenic | 60.0% | |
| CGTCGAAGCAGTTGTCGCCT+CGG | - | chr3_4:5925241-5925260 | Msa0487250:CDS | 60.0% | |
| TGCGAGGCGATAATCGACCG+AGG | + | chr3_4:5925261-5925280 | None:intergenic | 60.0% | |
| GGTCGATTATCGCCTCGCAC+CGG | - | chr3_4:5925262-5925281 | Msa0487250:CDS | 60.0% | |
| CATCATATGCCGCCGGTAGC+CGG | + | chr3_4:5925292-5925311 | None:intergenic | 60.0% | |
| ! | GGAGGAGAAGGGTGTGGAAG+TGG | - | chr3_4:5925766-5925785 | Msa0487250:CDS | 60.0% |
| ATCGCCTCGCACCGGAGCAC+CGG | - | chr3_4:5925270-5925289 | Msa0487250:CDS | 70.0% | |
| ATCGCCTCGCACCGGAGCAC+CGG | - | chr3_4:5925270-5925289 | Msa0487250:CDS | 70.0% | |
| GTAGCCGGTGCTCCGGTGCG+AGG | + | chr3_4:5925277-5925296 | None:intergenic | 75.0% | |
| !! | CGCACCGGAGCACCGGCTAC+CGG | - | chr3_4:5925277-5925296 | Msa0487250:CDS | 75.0% |
| !! | ACCGGAGCACCGGCTACCGG+CGG | - | chr3_4:5925280-5925299 | Msa0487250:CDS | 75.0% |
| GTAGCCGGTGCTCCGGTGCG+AGG | + | chr3_4:5925277-5925296 | None:intergenic | 75.0% | |
| !! | CGCACCGGAGCACCGGCTAC+CGG | - | chr3_4:5925277-5925296 | Msa0487250:CDS | 75.0% |
| !! | ACCGGAGCACCGGCTACCGG+CGG | - | chr3_4:5925280-5925299 | Msa0487250:CDS | 75.0% |
| ! | GCCGCCGGTAGCCGGTGCTC+CGG | + | chr3_4:5925284-5925303 | None:intergenic | 80.0% |
| ! | GCCGCCGGTAGCCGGTGCTC+CGG | + | chr3_4:5925284-5925303 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 5924909 | 5925898 | 5924909 | ID=Msa0487250;Name=Msa0487250 |
| chr3_4 | mRNA | 5924909 | 5925898 | 5924909 | ID=Msa0487250-mRNA-1;Parent=Msa0487250;Name=Msa0487250-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|329 |
| chr3_4 | exon | 5924909 | 5925898 | 5924909 | ID=Msa0487250-mRNA-1:exon:2071;Parent=Msa0487250-mRNA-1 |
| chr3_4 | CDS | 5924909 | 5925898 | 5924909 | ID=Msa0487250-mRNA-1:cds;Parent=Msa0487250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
