Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0488140 | XP_039688272.1 | 75.325 | 77 | 18 | 1 | 1 | 77 | 347 | 422 | 3.85e-25 | 121 |
Msa0488140 | XP_039688272.1 | 86.825 | 463 | 29 | 3 | 79 | 509 | 1 | 463 | 0.0 | 783 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0488140 | sp|O04539|SNL4_ARATH | 50.000 | 86 | 39 | 2 | 80 | 165 | 8 | 89 | 2.88e-14 | 80.5 |
Msa0488140 | sp|O04539|SNL4_ARATH | 46.667 | 90 | 44 | 2 | 535 | 621 | 8 | 96 | 1.93e-12 | 74.3 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0488140 | G7J085 | 75.325 | 77 | 18 | 1 | 1 | 77 | 347 | 422 | 1.84e-25 | 121 |
Msa0488140 | G7J085 | 86.825 | 463 | 29 | 3 | 79 | 509 | 1 | 463 | 0.0 | 783 |
Gene ID | Type | Classification |
---|---|---|
Msa0488140 | TR | Others |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0345270 | Msa0488140 | 0.858164 | 9.943216e-63 | -8.615850e-47 |
Msa0488140 | Msa0804410 | 0.823708 | 1.197760e-53 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0488140 | MtrunA17_Chr3g0077801 | 85.260 | 346 | 19 | 3 | 196 | 509 | 1 | 346 | 0.0 | 594 |
Msa0488140 | MtrunA17_Chr3g0077801 | 75.325 | 77 | 18 | 1 | 1 | 77 | 230 | 305 | 9.62e-30 | 120 |
Msa0488140 | MtrunA17_Chr3g0077901 | 62.286 | 350 | 100 | 3 | 192 | 509 | 17 | 366 | 1.33e-150 | 439 |
Msa0488140 | MtrunA17_Chr3g0077901 | 87.342 | 79 | 9 | 1 | 1 | 79 | 250 | 327 | 3.62e-35 | 136 |
Msa0488140 | MtrunA17_Chr3g0077851 | 66.364 | 330 | 79 | 3 | 212 | 509 | 1 | 330 | 9.28e-149 | 433 |
Msa0488140 | MtrunA17_Chr3g0077851 | 86.076 | 79 | 10 | 1 | 1 | 79 | 214 | 291 | 3.11e-36 | 139 |
Msa0488140 | MtrunA17_Chr4g0075971 | 54.525 | 442 | 139 | 7 | 100 | 509 | 185 | 596 | 7.52e-142 | 425 |
Msa0488140 | MtrunA17_Chr4g0075971 | 57.143 | 77 | 32 | 1 | 1 | 77 | 482 | 557 | 7.33e-20 | 93.6 |
Msa0488140 | MtrunA17_Chr4g0075971 | 34.815 | 135 | 78 | 3 | 84 | 218 | 10 | 134 | 2.11e-12 | 70.1 |
Msa0488140 | MtrunA17_Chr6g0488101 | 42.105 | 475 | 205 | 12 | 79 | 509 | 1 | 449 | 1.07e-110 | 340 |
Msa0488140 | MtrunA17_Chr6g0488101 | 50.000 | 76 | 37 | 1 | 1 | 76 | 327 | 401 | 1.50e-15 | 79.3 |
Msa0488140 | MtrunA17_Chr6g0488271 | 43.088 | 434 | 185 | 10 | 113 | 509 | 1 | 409 | 2.59e-105 | 324 |
Msa0488140 | MtrunA17_Chr6g0488271 | 48.684 | 76 | 38 | 1 | 1 | 76 | 287 | 361 | 7.41e-15 | 77.0 |
Msa0488140 | MtrunA17_Chr3g0112311 | 48.747 | 359 | 131 | 8 | 196 | 509 | 1 | 351 | 1.66e-99 | 307 |
Msa0488140 | MtrunA17_Chr3g0112311 | 47.945 | 73 | 37 | 1 | 1 | 73 | 229 | 300 | 1.60e-15 | 78.6 |
Msa0488140 | MtrunA17_Chr7g0252101 | 43.312 | 471 | 180 | 14 | 78 | 509 | 4 | 426 | 3.75e-99 | 309 |
Msa0488140 | MtrunA17_Chr7g0252101 | 52.500 | 80 | 34 | 2 | 1 | 77 | 310 | 388 | 1.78e-15 | 79.0 |
Msa0488140 | MtrunA17_Chr3g0093911 | 50.287 | 348 | 135 | 7 | 196 | 509 | 1 | 344 | 2.38e-96 | 299 |
Msa0488140 | MtrunA17_Chr3g0093911 | 51.250 | 80 | 35 | 2 | 1 | 77 | 228 | 306 | 4.05e-15 | 77.4 |
Msa0488140 | MtrunA17_Chr7g0243331 | 49.706 | 340 | 137 | 6 | 202 | 509 | 7 | 344 | 8.93e-93 | 290 |
Msa0488140 | MtrunA17_Chr7g0243331 | 54.167 | 72 | 32 | 1 | 1 | 72 | 228 | 298 | 4.04e-17 | 83.2 |
Msa0488140 | MtrunA17_Chr1g0207351 | 49.429 | 350 | 132 | 9 | 200 | 509 | 16 | 360 | 1.99e-90 | 284 |
Msa0488140 | MtrunA17_Chr1g0207351 | 51.250 | 80 | 35 | 2 | 1 | 77 | 244 | 322 | 4.78e-15 | 77.4 |
Msa0488140 | MtrunA17_Chr3g0122991 | 45.724 | 304 | 107 | 6 | 201 | 479 | 5 | 275 | 2.49e-76 | 244 |
Msa0488140 | MtrunA17_Chr3g0122991 | 53.623 | 69 | 31 | 1 | 1 | 69 | 189 | 256 | 2.72e-15 | 76.6 |
Msa0488140 | MtrunA17_Chr6g0452641 | 48.829 | 299 | 115 | 5 | 246 | 506 | 33 | 331 | 1.41e-73 | 239 |
Msa0488140 | MtrunA17_Chr6g0452641 | 53.425 | 73 | 33 | 1 | 1 | 73 | 211 | 282 | 4.59e-18 | 85.9 |
Msa0488140 | MtrunA17_Chr1g0209051 | 50.189 | 265 | 97 | 5 | 276 | 509 | 5 | 265 | 1.39e-67 | 221 |
Msa0488140 | MtrunA17_Chr1g0209051 | 46.341 | 82 | 40 | 2 | 1 | 79 | 149 | 229 | 1.26e-13 | 71.6 |
Msa0488140 | MtrunA17_Chr3g0123471 | 49.231 | 260 | 105 | 6 | 273 | 507 | 2 | 259 | 1.09e-61 | 205 |
Msa0488140 | MtrunA17_Chr3g0123471 | 50.000 | 78 | 38 | 1 | 1 | 78 | 146 | 222 | 6.02e-16 | 78.2 |
Msa0488140 | MtrunA17_Chr3g0077811 | 91.304 | 115 | 10 | 0 | 79 | 193 | 6 | 120 | 1.37e-56 | 187 |
Msa0488140 | MtrunA17_Chr4g0075861 | 50.000 | 216 | 75 | 3 | 101 | 311 | 186 | 373 | 5.31e-51 | 180 |
Msa0488140 | MtrunA17_Chr4g0075861 | 36.154 | 130 | 73 | 3 | 84 | 213 | 10 | 129 | 8.85e-12 | 67.4 |
Msa0488140 | MtrunA17_Chr7g0243391 | 46.698 | 212 | 93 | 2 | 192 | 383 | 14 | 225 | 2.40e-47 | 166 |
Msa0488140 | MtrunA17_Chr1g0202841 | 51.149 | 174 | 71 | 3 | 349 | 509 | 1 | 173 | 2.49e-44 | 156 |
Msa0488140 | MtrunA17_Chr1g0202841 | 50.000 | 80 | 36 | 2 | 1 | 77 | 55 | 133 | 2.83e-16 | 77.4 |
Msa0488140 | MtrunA17_Chr3g0077881 | 74.490 | 98 | 24 | 1 | 79 | 175 | 1 | 98 | 1.78e-41 | 148 |
Msa0488140 | MtrunA17_Chr3g0077881 | 57.609 | 92 | 34 | 2 | 528 | 614 | 84 | 175 | 5.94e-21 | 90.5 |
Msa0488140 | MtrunA17_Chr3g0077881 | 39.286 | 112 | 38 | 1 | 82 | 193 | 95 | 176 | 1.46e-12 | 66.6 |
Msa0488140 | MtrunA17_Chr1g0196231 | 50.993 | 151 | 66 | 3 | 188 | 333 | 219 | 366 | 6.24e-39 | 147 |
Msa0488140 | MtrunA17_Chr3g0077891 | 76.531 | 98 | 22 | 1 | 79 | 175 | 1 | 98 | 2.38e-38 | 139 |
Msa0488140 | MtrunA17_Chr3g0077891 | 63.291 | 79 | 26 | 1 | 539 | 614 | 97 | 175 | 1.29e-21 | 92.4 |
Msa0488140 | MtrunA17_Chr3g0077891 | 40.351 | 114 | 38 | 1 | 80 | 193 | 93 | 176 | 1.38e-14 | 72.4 |
Msa0488140 | MtrunA17_Chr3g0077941 | 76.042 | 96 | 23 | 0 | 79 | 174 | 1 | 96 | 5.97e-36 | 133 |
Msa0488140 | MtrunA17_Chr3g0077941 | 60.759 | 79 | 28 | 1 | 539 | 614 | 96 | 174 | 6.38e-21 | 90.5 |
Msa0488140 | MtrunA17_Chr3g0077941 | 41.964 | 112 | 35 | 1 | 82 | 193 | 94 | 175 | 2.10e-15 | 74.7 |
Msa0488140 | MtrunA17_Chr3g0077941 | 50.685 | 73 | 33 | 2 | 541 | 610 | 8 | 80 | 6.68e-11 | 61.6 |
Msa0488140 | MtrunA17_Chr6g0486591 | 45.752 | 153 | 64 | 4 | 376 | 509 | 1 | 153 | 5.19e-33 | 124 |
Msa0488140 | MtrunA17_Chr6g0486591 | 54.930 | 71 | 31 | 1 | 1 | 71 | 31 | 100 | 1.13e-18 | 83.6 |
Msa0488140 | MtrunA17_Chr3g0077911 | 62.921 | 89 | 29 | 1 | 79 | 167 | 1 | 85 | 9.76e-28 | 109 |
Msa0488140 | MtrunA17_Chr3g0077911 | 54.167 | 72 | 30 | 1 | 540 | 608 | 89 | 160 | 2.85e-13 | 68.2 |
Msa0488140 | MtrunA17_Chr3g0077911 | 47.945 | 73 | 38 | 0 | 80 | 152 | 84 | 156 | 8.78e-13 | 66.6 |
Msa0488140 | MtrunA17_Chr1g0206951 | 48.673 | 113 | 52 | 2 | 199 | 305 | 2 | 114 | 1.41e-27 | 107 |
Msa0488140 | MtrunA17_Chr1g0187941 | 46.667 | 135 | 59 | 2 | 349 | 470 | 1 | 135 | 8.30e-26 | 103 |
Msa0488140 | MtrunA17_Chr1g0187941 | 41.250 | 80 | 43 | 2 | 1 | 77 | 55 | 133 | 1.80e-11 | 62.4 |
Msa0488140 | MtrunA17_Chr3g0077861 | 60.674 | 89 | 31 | 1 | 79 | 167 | 1 | 85 | 2.34e-25 | 102 |
Msa0488140 | MtrunA17_Chr3g0077861 | 53.846 | 78 | 33 | 1 | 540 | 614 | 89 | 166 | 1.03e-15 | 75.1 |
Msa0488140 | MtrunA17_Chr3g0077861 | 47.945 | 73 | 38 | 0 | 80 | 152 | 84 | 156 | 6.97e-13 | 67.0 |
Msa0488140 | MtrunA17_Chr1g0209191 | 53.933 | 89 | 37 | 1 | 425 | 509 | 5 | 93 | 7.79e-24 | 96.3 |
Msa0488140 | MtrunA17_Chr1g0205811 | 52.809 | 89 | 39 | 2 | 81 | 169 | 9 | 94 | 1.63e-20 | 87.4 |
Msa0488140 | MtrunA17_Chr7g0238781 | 40.800 | 125 | 69 | 2 | 228 | 348 | 27 | 150 | 2.22e-20 | 88.6 |
Msa0488140 | MtrunA17_Chr6g0459061 | 25.773 | 291 | 184 | 7 | 208 | 468 | 22 | 310 | 7.52e-19 | 88.6 |
Msa0488140 | MtrunA17_Chr1g0196241 | 64.286 | 56 | 20 | 0 | 19 | 74 | 1 | 56 | 4.09e-18 | 79.7 |
Msa0488140 | MtrunA17_Chr1g0196241 | 60.317 | 63 | 24 | 1 | 421 | 482 | 12 | 74 | 1.10e-15 | 72.8 |
Msa0488140 | MtrunA17_Chr1g0205821 | 51.765 | 85 | 38 | 2 | 84 | 168 | 11 | 92 | 1.23e-17 | 81.3 |
Msa0488140 | MtrunA17_Chr1g0205821 | 44.156 | 77 | 42 | 1 | 85 | 161 | 98 | 173 | 1.30e-12 | 66.6 |
Msa0488140 | MtrunA17_Chr8g0364231 | 52.500 | 80 | 37 | 1 | 80 | 159 | 36 | 114 | 1.83e-15 | 80.5 |
Msa0488140 | MtrunA17_Chr8g0364231 | 52.564 | 78 | 33 | 2 | 535 | 609 | 36 | 112 | 3.07e-14 | 76.6 |
Msa0488140 | MtrunA17_Chr1g0205801 | 54.412 | 68 | 29 | 1 | 102 | 169 | 27 | 92 | 3.63e-15 | 72.0 |
Msa0488140 | MtrunA17_Chr5g0415031 | 53.247 | 77 | 35 | 1 | 80 | 156 | 37 | 112 | 4.45e-15 | 79.3 |
Msa0488140 | MtrunA17_Chr5g0415031 | 50.649 | 77 | 34 | 2 | 535 | 608 | 37 | 112 | 5.01e-13 | 72.8 |
Msa0488140 | MtrunA17_Chr1g0209061 | 30.000 | 150 | 53 | 4 | 86 | 235 | 10 | 107 | 1.15e-14 | 70.5 |
Msa0488140 | MtrunA17_Chr1g0206781 | 46.067 | 89 | 46 | 2 | 80 | 168 | 5 | 91 | 1.37e-14 | 70.5 |
Msa0488140 | MtrunA17_Chr1g0206781 | 50.000 | 72 | 32 | 2 | 539 | 607 | 9 | 79 | 1.90e-11 | 61.6 |
Msa0488140 | MtrunA17_Chr1g0205861 | 41.573 | 89 | 51 | 1 | 79 | 167 | 9 | 96 | 2.48e-14 | 69.7 |
Msa0488140 | MtrunA17_Chr1g0206771 | 50.704 | 71 | 34 | 1 | 84 | 154 | 93 | 162 | 4.35e-14 | 70.9 |
Msa0488140 | MtrunA17_Chr1g0206771 | 54.688 | 64 | 25 | 2 | 542 | 602 | 17 | 79 | 1.79e-11 | 63.5 |
Msa0488140 | MtrunA17_Chr1g0205831 | 44.828 | 87 | 46 | 2 | 92 | 178 | 79 | 163 | 3.05e-13 | 68.6 |
Msa0488140 | MtrunA17_Chr1g0205831 | 50.000 | 56 | 28 | 0 | 101 | 156 | 16 | 71 | 4.92e-11 | 62.0 |
Msa0488140 | MtrunA17_Chr6g0452001 | 45.783 | 83 | 44 | 1 | 80 | 162 | 57 | 138 | 5.82e-13 | 72.4 |
Msa0488140 | MtrunA17_Chr6g0452001 | 49.351 | 77 | 35 | 2 | 535 | 608 | 57 | 132 | 1.08e-11 | 68.2 |
Msa0488140 | MtrunA17_Chr7g0218891 | 37.500 | 96 | 58 | 2 | 68 | 161 | 166 | 261 | 2.66e-12 | 67.8 |
Msa0488140 | MtrunA17_Chr8g0364021 | 48.052 | 77 | 39 | 1 | 80 | 156 | 38 | 113 | 3.61e-12 | 66.6 |
Msa0488140 | MtrunA17_Chr2g0328701 | 39.583 | 96 | 53 | 2 | 84 | 179 | 27 | 117 | 1.20e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0488140 | AT5G15025.1 | 48.235 | 85 | 39 | 2 | 82 | 166 | 43 | 122 | 1.24e-15 | 73.9 |
Msa0488140 | AT1G70060.2 | 50.000 | 86 | 39 | 2 | 80 | 165 | 8 | 89 | 2.93e-15 | 80.5 |
Msa0488140 | AT1G70060.2 | 46.667 | 90 | 44 | 2 | 535 | 621 | 8 | 96 | 1.96e-13 | 74.3 |
Msa0488140 | AT1G70060.1 | 50.000 | 86 | 39 | 2 | 80 | 165 | 8 | 89 | 2.93e-15 | 80.5 |
Msa0488140 | AT1G70060.1 | 46.667 | 90 | 44 | 2 | 535 | 621 | 8 | 96 | 1.96e-13 | 74.3 |
Msa0488140 | AT1G24190.3 | 48.052 | 77 | 39 | 1 | 80 | 156 | 8 | 83 | 8.18e-14 | 75.5 |
Msa0488140 | AT1G24190.3 | 49.351 | 77 | 35 | 2 | 535 | 608 | 8 | 83 | 2.53e-12 | 70.9 |
Msa0488140 | AT1G24190.1 | 48.052 | 77 | 39 | 1 | 80 | 156 | 8 | 83 | 9.05e-14 | 75.5 |
Msa0488140 | AT1G24190.1 | 49.351 | 77 | 35 | 2 | 535 | 608 | 8 | 83 | 2.64e-12 | 70.9 |
Msa0488140 | AT1G24190.2 | 48.052 | 77 | 39 | 1 | 80 | 156 | 8 | 83 | 9.12e-14 | 75.5 |
Msa0488140 | AT1G24190.2 | 49.351 | 77 | 35 | 2 | 535 | 608 | 8 | 83 | 2.73e-12 | 70.9 |
Msa0488140 | AT3G01320.2 | 47.059 | 85 | 43 | 2 | 78 | 162 | 49 | 131 | 2.60e-13 | 73.9 |
Msa0488140 | AT3G01320.2 | 48.780 | 82 | 38 | 2 | 530 | 608 | 46 | 126 | 9.33e-13 | 72.4 |
Msa0488140 | AT3G01320.1 | 47.059 | 85 | 43 | 2 | 78 | 162 | 49 | 131 | 2.74e-13 | 73.9 |
Msa0488140 | AT3G01320.1 | 48.780 | 82 | 38 | 2 | 530 | 608 | 46 | 126 | 9.85e-13 | 72.0 |
Msa0488140 | AT1G70030.3 | 45.000 | 80 | 43 | 1 | 80 | 159 | 16 | 94 | 2.46e-12 | 64.7 |
Msa0488140 | AT1G59890.2 | 50.704 | 71 | 34 | 1 | 86 | 156 | 45 | 114 | 3.13e-12 | 70.5 |
Msa0488140 | AT1G59890.3 | 50.704 | 71 | 34 | 1 | 86 | 156 | 45 | 114 | 3.23e-12 | 70.5 |
Msa0488140 | AT1G59890.4 | 50.704 | 71 | 34 | 1 | 86 | 156 | 45 | 114 | 3.31e-12 | 70.5 |
Msa0488140 | AT1G59890.1 | 50.704 | 71 | 34 | 1 | 86 | 156 | 45 | 114 | 3.31e-12 | 70.5 |
Msa0488140 | AT1G24200.1 | 50.000 | 72 | 35 | 1 | 83 | 154 | 11 | 81 | 3.44e-12 | 66.2 |
Msa0488140 | AT5G15020.2 | 50.649 | 77 | 34 | 2 | 535 | 608 | 46 | 121 | 5.74e-12 | 69.7 |
Msa0488140 | AT5G15020.2 | 46.753 | 77 | 40 | 1 | 80 | 156 | 46 | 121 | 7.24e-12 | 69.3 |
Msa0488140 | AT5G15020.1 | 50.649 | 77 | 34 | 2 | 535 | 608 | 46 | 121 | 5.80e-12 | 69.7 |
Msa0488140 | AT5G15020.1 | 46.753 | 77 | 40 | 1 | 80 | 156 | 46 | 121 | 7.01e-12 | 69.3 |
Msa0488140 | AT1G70030.2 | 45.000 | 80 | 43 | 1 | 80 | 159 | 16 | 94 | 8.35e-12 | 63.5 |
Msa0488140 | AT1G70030.1 | 45.000 | 80 | 43 | 1 | 80 | 159 | 5 | 83 | 1.12e-11 | 63.9 |
Msa0488140 | AT4G12020.11 | 46.575 | 73 | 34 | 2 | 539 | 608 | 306 | 376 | 2.90e-11 | 67.4 |
Msa0488140 | AT4G12020.7 | 46.575 | 73 | 34 | 2 | 539 | 608 | 306 | 376 | 3.15e-11 | 67.4 |
Msa0488140 | AT4G12020.4 | 46.575 | 73 | 34 | 2 | 539 | 608 | 306 | 376 | 3.18e-11 | 67.4 |
Msa0488140 | AT4G12020.1 | 46.575 | 73 | 34 | 2 | 539 | 608 | 306 | 376 | 3.21e-11 | 67.4 |
Msa0488140 | AT4G12020.9 | 46.575 | 73 | 34 | 2 | 539 | 608 | 306 | 376 | 3.21e-11 | 67.4 |
Msa0488140 | AT4G12020.2 | 46.575 | 73 | 34 | 2 | 539 | 608 | 306 | 376 | 3.24e-11 | 67.4 |
Msa0488140 | AT4G12020.6 | 46.575 | 73 | 34 | 2 | 539 | 608 | 306 | 376 | 3.28e-11 | 67.4 |
Msa0488140 | AT4G12020.8 | 46.575 | 73 | 34 | 2 | 539 | 608 | 306 | 376 | 3.28e-11 | 67.4 |
Msa0488140 | AT4G12020.10 | 46.575 | 73 | 34 | 2 | 539 | 608 | 306 | 376 | 3.40e-11 | 67.4 |
Msa0488140 | AT4G12020.5 | 46.575 | 73 | 34 | 2 | 539 | 608 | 239 | 309 | 3.41e-11 | 67.4 |
Msa0488140 | AT4G12020.3 | 46.575 | 73 | 34 | 2 | 539 | 608 | 306 | 376 | 3.46e-11 | 67.4 |
Msa0488140 | AT1G24230.1 | 44.928 | 69 | 38 | 0 | 83 | 151 | 11 | 79 | 7.22e-11 | 63.5 |
Find 101 sgRNAs with CRISPR-Local
Find 932 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTTCAAAACTCCACCTTTC+AGG | 0.097951 | 3_4:+7410669 | None:intergenic |
TTCTGGTACTTAGCCTATTT+TGG | 0.108241 | 3_4:-7398924 | Msa0488140:CDS |
ACCTTCTTTCTTCTTGTAAA+TGG | 0.145840 | 3_4:+7398843 | None:intergenic |
AGGGCATACAAATTTAATTT+TGG | 0.179333 | 3_4:-7396661 | Msa0488140:CDS |
CTATCATGCTTAATGTATTT+TGG | 0.196702 | 3_4:+7398234 | None:intergenic |
ATATGTAGAATTGACTTTAA+AGG | 0.213151 | 3_4:+7398806 | None:intergenic |
TACCATGTCTTACTTGCTTT+TGG | 0.226717 | 3_4:-7398777 | Msa0488140:CDS |
AGAAATTGTTAAGGATTTCT+TGG | 0.273481 | 3_4:-7396741 | Msa0488140:CDS |
ATTATCTTCTATGTTATTCA+TGG | 0.297170 | 3_4:+7399181 | None:intergenic |
GGGAGTTTCATAAAACTTAC+TGG | 0.299093 | 3_4:-7399067 | Msa0488140:CDS |
ACAACATGTAAAGTGTGTTT+AGG | 0.310726 | 3_4:-7398273 | Msa0488140:CDS |
ATCTCAAAATTAAATCTTCA+TGG | 0.311366 | 3_4:+7401443 | None:intergenic |
TCAAGAATATCCCAGGAAAA+TGG | 0.316158 | 3_4:+7399155 | None:intergenic |
CTCTCCCTTGACGATGCATT+AGG | 0.326781 | 3_4:-7401607 | Msa0488140:CDS |
CAACATGTAAAGTGTGTTTA+GGG | 0.332853 | 3_4:-7398272 | Msa0488140:CDS |
GTCGCTTCATGTAAAAGTTC+TGG | 0.333120 | 3_4:-7398729 | Msa0488140:CDS |
TCAGCATTAAAATGTAAGTT+TGG | 0.340713 | 3_4:-7401577 | Msa0488140:CDS |
TTTAATAACTAATGGTTCTT+GGG | 0.345665 | 3_4:+7399028 | None:intergenic |
TTTCTTGCGTGTGCAAGAAT+TGG | 0.355227 | 3_4:-7399091 | Msa0488140:CDS |
CGAAGACCATCAATCAATTC+TGG | 0.363197 | 3_4:-7398941 | Msa0488140:intron |
TCTCCCTTGACGATGCATTA+GGG | 0.366688 | 3_4:-7401606 | Msa0488140:CDS |
TTTGATAGATGAAAGATTCA+TGG | 0.368141 | 3_4:+7410632 | None:intergenic |
TCCGCTAGAACATCCAAAAT+AGG | 0.373337 | 3_4:+7398911 | None:intergenic |
ATTAAGAGTGTACGAGTTGT+TGG | 0.382597 | 3_4:-7401470 | Msa0488140:CDS |
AGCAAGTAGGCATTCTCCTT+TGG | 0.391766 | 3_4:+7398198 | None:intergenic |
AAAGGAGAATGCCTACTTGC+TGG | 0.396598 | 3_4:-7398196 | Msa0488140:CDS |
TTTCAAAACCCCACCTCCTC+AGG | 0.410146 | 3_4:+7398328 | None:intergenic |
GTTAAGGATTTCTTGGCTGC+TGG | 0.414806 | 3_4:-7396734 | Msa0488140:CDS |
TTTCAAAACTCCACCTTTCA+GGG | 0.421497 | 3_4:+7410670 | None:intergenic |
TACATTAAGCATGATAGAAC+TGG | 0.424208 | 3_4:-7398228 | Msa0488140:CDS |
TTTGTCAAGTTGGAAAGTTT+GGG | 0.424608 | 3_4:-7410744 | Msa0488140:CDS |
GTAAGTTTGGATATGAGAAA+AGG | 0.430304 | 3_4:-7401564 | Msa0488140:CDS |
ATGAGTTTCAAGATAAGGAT+AGG | 0.432045 | 3_4:-7396784 | Msa0488140:CDS |
TAAGTTTGGATATGAGAAAA+GGG | 0.432227 | 3_4:-7401563 | Msa0488140:CDS |
AGGAAAAGAATTTCTTATCA+TGG | 0.433315 | 3_4:+7398997 | None:intergenic |
TAAACACACTTTACATGTTG+TGG | 0.439177 | 3_4:+7398275 | None:intergenic |
TTATGTCAAGCTGGAAACTT+TGG | 0.444741 | 3_4:-7398403 | Msa0488140:intron |
AGTTTGATTTCATATTTAGT+TGG | 0.445957 | 3_4:+7401406 | None:intergenic |
AAATTAAATGAGCTGTTTCA+AGG | 0.447498 | 3_4:-7396681 | Msa0488140:CDS |
TATGTCAAGCTGGAAACTTT+GGG | 0.448977 | 3_4:-7398402 | Msa0488140:intron |
GTCATCGAAATCTAGATCTC+TGG | 0.451722 | 3_4:+7399124 | None:intergenic |
TTCATATTTAGTTGGCAAGA+AGG | 0.469109 | 3_4:+7401414 | None:intergenic |
AAGTAGGCATTCTCCTTTGG+AGG | 0.471286 | 3_4:+7398201 | None:intergenic |
CTAAGGTTAGTTTGCTGTGA+TGG | 0.475690 | 3_4:-7398498 | Msa0488140:CDS |
ATATGAAATCAAACTTCCAT+TGG | 0.479714 | 3_4:-7401398 | Msa0488140:CDS |
AGCGGATATTTGATCATGAA+AGG | 0.482955 | 3_4:-7398894 | Msa0488140:CDS |
CATTGAGCAACCTGAGGAGG+TGG | 0.488223 | 3_4:-7398338 | Msa0488140:CDS |
AAAAGATGAGTTTCAAGATA+AGG | 0.489302 | 3_4:-7396789 | Msa0488140:CDS |
GTAAACATTCAATATTTCCT+CGG | 0.492474 | 3_4:+7398449 | None:intergenic |
ACAAAGTCAACAACCTTCCA+TGG | 0.493618 | 3_4:+7398645 | None:intergenic |
CTTGCGTGTGCAAGAATTGG+AGG | 0.496446 | 3_4:-7399088 | Msa0488140:CDS |
AGAATGCCTACTTGCTGGAT+TGG | 0.496684 | 3_4:-7398191 | Msa0488140:CDS |
TAAGTACCAGAATTGATTGA+TGG | 0.499348 | 3_4:+7398935 | None:intergenic |
TCCATTTACAAGAAGAAAGA+AGG | 0.500617 | 3_4:-7398844 | Msa0488140:CDS |
GCGGATATTTGATCATGAAA+GGG | 0.505605 | 3_4:-7398893 | Msa0488140:CDS |
TCGGTCAGCTATGCTGATGA+AGG | 0.509137 | 3_4:+7398977 | None:intergenic |
GTCACCAACGAGGCCATCAT+AGG | 0.512536 | 3_4:-7398597 | Msa0488140:CDS |
ACAAATTATGAAGGATTACA+AGG | 0.516015 | 3_4:-7401521 | Msa0488140:CDS |
AATCACACCTTCAGTTCAGC+TGG | 0.522086 | 3_4:-7401302 | Msa0488140:CDS |
CATCACAGCAAACTAACCTT+AGG | 0.524454 | 3_4:+7398499 | None:intergenic |
TGAGTTTCAAGATAAGGATA+GGG | 0.531894 | 3_4:-7396783 | Msa0488140:CDS |
GGCTGAAAGAATTGATGCTA+GGG | 0.536935 | 3_4:-7401500 | Msa0488140:CDS |
CAAGTCGAGTACACCTATGA+TGG | 0.537478 | 3_4:+7398584 | None:intergenic |
AGGCTGAAAGAATTGATGCT+AGG | 0.540522 | 3_4:-7401501 | Msa0488140:CDS |
GGAAATATTGAATGTTTACA+AGG | 0.540759 | 3_4:-7398445 | Msa0488140:intron |
TGTTGTGGATGAAAGATTGA+TGG | 0.544678 | 3_4:+7398290 | None:intergenic |
AATTAAATGAGCTGTTTCAA+GGG | 0.549600 | 3_4:-7396680 | Msa0488140:CDS |
CTTTAGACATCAACGATATG+AGG | 0.560266 | 3_4:-7398166 | Msa0488140:intron |
ATTTAACAGTGGGAAATCCA+TGG | 0.561286 | 3_4:-7398662 | Msa0488140:intron |
TGTGAAGTAGATGTTACATC+GGG | 0.569048 | 3_4:+7398522 | None:intergenic |
TACACCTATGATGGCCTCGT+TGG | 0.570402 | 3_4:+7398593 | None:intergenic |
ATGCATTGATAAACCCTGAA+AGG | 0.574234 | 3_4:-7410683 | Msa0488140:CDS |
AATGACATCAAGAATATCCC+AGG | 0.580022 | 3_4:+7399148 | None:intergenic |
AGTGGTTCATATTGAGTCCG+AGG | 0.581618 | 3_4:-7398466 | Msa0488140:CDS |
CCAGTGTCCAGCTGAACTGA+AGG | 0.581775 | 3_4:+7401295 | None:intergenic |
TAACCGGTGTCAATTTGAAG+TGG | 0.582458 | 3_4:+7396597 | None:intergenic |
CCTTCAGTTCAGCTGGACAC+TGG | 0.584057 | 3_4:-7401295 | Msa0488140:intron |
TCATCGTCATCACGATCCAA+TGG | 0.590882 | 3_4:+7401382 | None:intergenic |
TTGCGTGTGCAAGAATTGGA+GGG | 0.591841 | 3_4:-7399087 | Msa0488140:CDS |
ACACGCAAGAAAATTGAAAG+AGG | 0.594871 | 3_4:+7399102 | None:intergenic |
TAACATCTACTTCACACCTA+AGG | 0.596246 | 3_4:-7398515 | Msa0488140:CDS |
ATAAGGATGATTAGTTGTGA+TGG | 0.600470 | 3_4:-7410843 | None:intergenic |
TTGAGCAACCTGAGGAGGTG+GGG | 0.603109 | 3_4:-7398336 | Msa0488140:CDS |
AACAGTGGGAAATCCATGGA+AGG | 0.604878 | 3_4:-7398658 | Msa0488140:intron |
ATTGAGCAACCTGAGGAGGT+GGG | 0.606051 | 3_4:-7398337 | Msa0488140:CDS |
TAACCCTAATGCATCGTCAA+GGG | 0.606424 | 3_4:+7401603 | None:intergenic |
CATTGATAAACCCTGAAAGG+TGG | 0.610576 | 3_4:-7410680 | Msa0488140:CDS |
TAATGCTAATGCATTCTCAA+AGG | 0.613374 | 3_4:+7396901 | None:intergenic |
GTGTGAAGTAGATGTTACAT+CGG | 0.616275 | 3_4:+7398521 | None:intergenic |
CTTCCACTTCAAATTGACAC+CGG | 0.619789 | 3_4:-7396600 | Msa0488140:intron |
AAAGCACCAATCCAGCAAGT+AGG | 0.620337 | 3_4:+7398185 | None:intergenic |
CGGATATTTGATCATGAAAG+GGG | 0.623275 | 3_4:-7398892 | Msa0488140:CDS |
TTAACCCTAATGCATCGTCA+AGG | 0.624879 | 3_4:+7401602 | None:intergenic |
AGAGTGTACGAGTTGTTGGA+CGG | 0.625456 | 3_4:-7401466 | Msa0488140:CDS |
ATGCATTGAGCAACCTGAGG+AGG | 0.630478 | 3_4:-7398341 | Msa0488140:CDS |
TGCCAAAAGCAAGTAAGACA+TGG | 0.647599 | 3_4:+7398775 | None:intergenic |
TAGAACTGGAGTTCCTCCAA+AGG | 0.655923 | 3_4:-7398214 | Msa0488140:CDS |
TCTATGCATTGAGCAACCTG+AGG | 0.699387 | 3_4:-7398344 | Msa0488140:CDS |
AACATGTAAAGTGTGTTTAG+GGG | 0.701783 | 3_4:-7398271 | Msa0488140:CDS |
GACGATGATGAAGAACAAGA+TGG | 0.708057 | 3_4:-7401367 | Msa0488140:CDS |
TATATATGTTGTCACCAACG+AGG | 0.759362 | 3_4:-7398607 | Msa0488140:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTATTATATTTTGTATTGA+TGG | - | chr3_4:7397044-7397063 | Msa0488140:intron | 10.0% |
!! | TTTCTTAAATAAAATAGAAA+TGG | + | chr3_4:7397269-7397288 | None:intergenic | 10.0% |
!!! | TGTTTTATATTTTAAGTATT+AGG | - | chr3_4:7399164-7399183 | Msa0488140:CDS | 10.0% |
!!! | GTTTTATATTTTAAGTATTA+GGG | - | chr3_4:7399165-7399184 | Msa0488140:CDS | 10.0% |
!!! | ATGAATTATTTTTTTCAATT+TGG | - | chr3_4:7402056-7402075 | Msa0488140:intron | 10.0% |
!!! | AATTTAGTTGTTAATTTTAA+AGG | - | chr3_4:7405493-7405512 | Msa0488140:intron | 10.0% |
!!! | ATTTAGTTGTTAATTTTAAA+GGG | - | chr3_4:7405494-7405513 | Msa0488140:intron | 10.0% |
!! | ATTATTAAATTTCAATCTTA+GGG | + | chr3_4:7406415-7406434 | None:intergenic | 10.0% |
!! | TATTATTAAATTTCAATCTT+AGG | + | chr3_4:7406416-7406435 | None:intergenic | 10.0% |
!! | ATTGAAATTTAATAATAGAA+AGG | - | chr3_4:7406419-7406438 | Msa0488140:intron | 10.0% |
!!! | TCTTTATCTTATTATTTTTA+AGG | - | chr3_4:7407387-7407406 | Msa0488140:intron | 10.0% |
!!! | AAAAATATTTTTTTGGTTTT+AGG | - | chr3_4:7407465-7407484 | Msa0488140:intron | 10.0% |
!! | CAAATATTCTATATATTATA+AGG | - | chr3_4:7407612-7407631 | Msa0488140:intron | 10.0% |
!!! | TTCTAAAAAATTTATATTTG+AGG | + | chr3_4:7408813-7408832 | None:intergenic | 10.0% |
!! | CAAATTATTGGAAAATAAAA+GGG | + | chr3_4:7396970-7396989 | None:intergenic | 15.0% |
!! | TCAAATTATTGGAAAATAAA+AGG | + | chr3_4:7396971-7396990 | None:intergenic | 15.0% |
!! | AGTTTATTTAGTCAAATTAT+TGG | + | chr3_4:7396982-7397001 | None:intergenic | 15.0% |
!! | TTAAGTAGAAAATATAAGTT+TGG | - | chr3_4:7397479-7397498 | Msa0488140:intron | 15.0% |
!!! | AGATTTTGTCAAAAAAAATT+AGG | + | chr3_4:7397875-7397894 | None:intergenic | 15.0% |
!! | AAATATCAGACATAATAATT+TGG | + | chr3_4:7398640-7398659 | None:intergenic | 15.0% |
!!! | ATTTTTGATTTCATACTTAA+AGG | + | chr3_4:7398999-7399018 | None:intergenic | 15.0% |
!!! | AACTTTTAATATATGTTTCA+TGG | - | chr3_4:7399096-7399115 | Msa0488140:CDS | 15.0% |
!! | ACTTAAAATATAAAACAAAG+TGG | + | chr3_4:7399161-7399180 | None:intergenic | 15.0% |
!!! | ATTGAATTAATTTTTCTTCA+GGG | + | chr3_4:7399469-7399488 | None:intergenic | 15.0% |
!!! | TATTGAATTAATTTTTCTTC+AGG | + | chr3_4:7399470-7399489 | None:intergenic | 15.0% |
!! | ATAATTCAAAGTGAAATATA+AGG | - | chr3_4:7400459-7400478 | Msa0488140:intron | 15.0% |
!!! | TTTATTCCATTATCAATTTT+AGG | - | chr3_4:7400743-7400762 | Msa0488140:intron | 15.0% |
!! | TGAAAAAAATAATTCATGTA+AGG | + | chr3_4:7402053-7402072 | None:intergenic | 15.0% |
!!! | TAAAAAAGTATGTGATAATT+TGG | - | chr3_4:7402138-7402157 | Msa0488140:intron | 15.0% |
!!! | TTTATTCCATTATCAATTTT+AGG | - | chr3_4:7400743-7400762 | Msa0488140:intron | 15.0% |
!!! | TATATAAAGTGTCAATAAAT+TGG | - | chr3_4:7406215-7406234 | Msa0488140:intron | 15.0% |
!!! | AATGTTTACAAAATATTTTC+TGG | + | chr3_4:7406653-7406672 | None:intergenic | 15.0% |
!!! | TTATTTTTAAGGCTTAAATA+TGG | - | chr3_4:7407398-7407417 | Msa0488140:intron | 15.0% |
!!! | ACCAAAAAAATATTTTTACA+GGG | + | chr3_4:7407462-7407481 | None:intergenic | 15.0% |
!!! | AACCAAAAAAATATTTTTAC+AGG | + | chr3_4:7407463-7407482 | None:intergenic | 15.0% |
!!! | AAATATAGAATAATTGGTTT+TGG | - | chr3_4:7407494-7407513 | Msa0488140:intron | 15.0% |
!! | AAATCATTTCATATTGAAAT+TGG | - | chr3_4:7407545-7407564 | Msa0488140:intron | 15.0% |
!!! | AAATATACAAAATTTGGTTT+TGG | + | chr3_4:7407690-7407709 | None:intergenic | 15.0% |
!!! | ACCAAAAAAAATATTTTTAC+AGG | - | chr3_4:7407722-7407741 | Msa0488140:intron | 15.0% |
!!! | CCAAAAAAAATATTTTTACA+GGG | - | chr3_4:7407723-7407742 | Msa0488140:intron | 15.0% |
!! | TAAATAACAAAGGATAATAT+TGG | - | chr3_4:7407923-7407942 | Msa0488140:intron | 15.0% |
!!! | TAAGACTTTTTAATAACTAA+TGG | + | chr3_4:7408350-7408369 | None:intergenic | 15.0% |
!!! | AGATTTAGAACTTTAAATTA+CGG | + | chr3_4:7409578-7409597 | None:intergenic | 15.0% |
!! | AAAAAAAAAAAAAAGCAATC+TGG | + | chr3_4:7409633-7409652 | None:intergenic | 15.0% |
!!! | AGATTGCTTTTTTTTTTTTT+TGG | - | chr3_4:7409632-7409651 | Msa0488140:intron | 15.0% |
!!! | TTTGACTAAATAAACTTGTT+TGG | - | chr3_4:7396986-7397005 | Msa0488140:intron | 20.0% |
!!! | TTATATTTTGTATTGATGGA+AGG | - | chr3_4:7397048-7397067 | Msa0488140:intron | 20.0% |
!!! | TATATTTTGTATTGATGGAA+GGG | - | chr3_4:7397049-7397068 | Msa0488140:intron | 20.0% |
!!! | AAGGAATTTTTTTTTTTGCT+GGG | - | chr3_4:7397337-7397356 | Msa0488140:intron | 20.0% |
!! | TTTGTCAAAAAAAATTAGGT+AGG | + | chr3_4:7397871-7397890 | None:intergenic | 20.0% |
!! | CTGTAATTTCAATTAGTATA+TGG | - | chr3_4:7397954-7397973 | Msa0488140:intron | 20.0% |
!! | ATGGTTGTTAAATTAGTATA+TGG | - | chr3_4:7397973-7397992 | Msa0488140:intron | 20.0% |
!!! | TTAATTTTACACATTTCTTG+TGG | - | chr3_4:7398023-7398042 | Msa0488140:intron | 20.0% |
!! | TCAAGTGTAAAAAATTTACA+CGG | + | chr3_4:7398442-7398461 | None:intergenic | 20.0% |
!!! | AAAATTACATTTTACCCTTT+TGG | + | chr3_4:7398776-7398795 | None:intergenic | 20.0% |
!!! | ATATAAGTTGAACGAAAAAT+CGG | - | chr3_4:7399378-7399397 | Msa0488140:intron | 20.0% |
!!! | AAACATTTTTAGTTAACCAT+GGG | + | chr3_4:7399955-7399974 | None:intergenic | 20.0% |
!!! | AAAACATTTTTAGTTAACCA+TGG | + | chr3_4:7399956-7399975 | None:intergenic | 20.0% |
!!! | TGGTTAACTAAAAATGTTTT+TGG | - | chr3_4:7399956-7399975 | Msa0488140:intron | 20.0% |
!!! | ATTTTGATTATCATGTTTTG+TGG | + | chr3_4:7400385-7400404 | None:intergenic | 20.0% |
!! | AATGATAATTGTGAAATGAA+AGG | + | chr3_4:7400724-7400743 | None:intergenic | 20.0% |
!!! | TTTTTTAGTAAAGTATCAAG+AGG | + | chr3_4:7402125-7402144 | None:intergenic | 20.0% |
!! | CTTAAAGTGATAATCATTAT+TGG | - | chr3_4:7402170-7402189 | Msa0488140:intron | 20.0% |
!!! | TATGAGTTTAACTTTGTTAT+TGG | - | chr3_4:7402194-7402213 | Msa0488140:intron | 20.0% |
!!! | GAAAGAAAATTAAGAAGTAT+AGG | + | chr3_4:7403061-7403080 | None:intergenic | 20.0% |
!!! | TTTAGTTTATAATGACATTG+TGG | - | chr3_4:7403171-7403190 | Msa0488140:intron | 20.0% |
!!! | CTTATTGTTTATTTTGCATT+TGG | - | chr3_4:7403271-7403290 | Msa0488140:intron | 20.0% |
!! | AAAAAATCAAATAACGTGAA+GGG | + | chr3_4:7403348-7403367 | None:intergenic | 20.0% |
!! | TAAAAAATCAAATAACGTGA+AGG | + | chr3_4:7403349-7403368 | None:intergenic | 20.0% |
!! | AATGATAATTGTGAAATGAA+AGG | + | chr3_4:7400724-7400743 | None:intergenic | 20.0% |
!! | TTGTTAGATAAAAGTTGTAA+TGG | + | chr3_4:7403959-7403978 | None:intergenic | 20.0% |
!! | TGTAAATAGAGTAAAAGTTT+AGG | + | chr3_4:7404067-7404086 | None:intergenic | 20.0% |
!!! | TTTACATGACTCTTATTTAT+AGG | + | chr3_4:7404246-7404265 | None:intergenic | 20.0% |
!! | TTGAACTTCATTTATATTTG+AGG | - | chr3_4:7404472-7404491 | Msa0488140:intron | 20.0% |
!! | AAAAAGAACAAGTTAAGAAA+TGG | + | chr3_4:7404721-7404740 | None:intergenic | 20.0% |
!!! | ACTTGATTATTTTTGTATTG+TGG | + | chr3_4:7404846-7404865 | None:intergenic | 20.0% |
!! | CAATACAAAAATAATCAAGT+TGG | - | chr3_4:7404846-7404865 | Msa0488140:intron | 20.0% |
!!! | AAATAATCAAGTTGGTTTTT+TGG | - | chr3_4:7404854-7404873 | Msa0488140:intron | 20.0% |
!!! | AATAATCAAGTTGGTTTTTT+GGG | - | chr3_4:7404855-7404874 | Msa0488140:intron | 20.0% |
!!! | TCTTTGGTGTAATATTTAAT+AGG | - | chr3_4:7404965-7404984 | Msa0488140:intron | 20.0% |
!!! | CTTTGGTGTAATATTTAATA+GGG | - | chr3_4:7404966-7404985 | Msa0488140:intron | 20.0% |
!! | TGTAGATTTCTAATTGTTAT+TGG | + | chr3_4:7405067-7405086 | None:intergenic | 20.0% |
!!! | TTTTTTATCAGACAAAGTTT+AGG | + | chr3_4:7405392-7405411 | None:intergenic | 20.0% |
!! | TTAAAAGAAATTTGGAAAAG+AGG | + | chr3_4:7405520-7405539 | None:intergenic | 20.0% |
!!! | TCTTTTCCAAATTTCTTTTA+AGG | - | chr3_4:7405519-7405538 | Msa0488140:intron | 20.0% |
!!! | ATCTTTTCTACAAATTATGA+AGG | - | chr3_4:7405837-7405856 | Msa0488140:intron | 20.0% |
!! | ATCTCAAAATTAAATCTTCA+TGG | + | chr3_4:7405927-7405946 | None:intergenic | 20.0% |
!!! | AGTTTGATTTCATATTTAGT+TGG | + | chr3_4:7405964-7405983 | None:intergenic | 20.0% |
!! | TTTATATAGCTATATAGCTA+AGG | + | chr3_4:7406203-7406222 | None:intergenic | 20.0% |
!! | GAGTACTAAAAAAATGATTA+GGG | - | chr3_4:7406883-7406902 | Msa0488140:intron | 20.0% |
!! | AGTACTAAAAAAATGATTAG+GGG | - | chr3_4:7406884-7406903 | Msa0488140:intron | 20.0% |
!!! | ATAGTTTATTATCCCATTTT+CGG | + | chr3_4:7407310-7407329 | None:intergenic | 20.0% |
!! | AACTATTCACATTAAAATGT+TGG | - | chr3_4:7407324-7407343 | Msa0488140:intron | 20.0% |
!! | ATTATATTCCCAAACAAAAA+TGG | + | chr3_4:7407353-7407372 | None:intergenic | 20.0% |
!!! | ATTTTTGTTTGGGAATATAA+TGG | - | chr3_4:7407352-7407371 | Msa0488140:intron | 20.0% |
!!! | TTTTTGTTTGGGAATATAAT+GGG | - | chr3_4:7407353-7407372 | Msa0488140:intron | 20.0% |
!!! | TCCCTGTAAAAATATTTTTT+TGG | - | chr3_4:7407458-7407477 | Msa0488140:intron | 20.0% |
!!! | CAATATGAAATGATTTTACA+AGG | + | chr3_4:7407541-7407560 | None:intergenic | 20.0% |
!! | GGACTAAAATGAATATTATA+GGG | + | chr3_4:7407572-7407591 | None:intergenic | 20.0% |
!! | AGGACTAAAATGAATATTAT+AGG | + | chr3_4:7407573-7407592 | None:intergenic | 20.0% |
!!! | AAATTGATTCATATTGGATT+TGG | + | chr3_4:7407639-7407658 | None:intergenic | 20.0% |
!!! | CTTGTAAAATTGATTCATAT+TGG | + | chr3_4:7407645-7407664 | None:intergenic | 20.0% |
!!! | CAATATGAATCAATTTTACA+AGG | - | chr3_4:7407643-7407662 | Msa0488140:intron | 20.0% |
!!! | CCCTGTAAAAATATTTTTTT+TGG | + | chr3_4:7407459-7407478 | None:intergenic | 20.0% |
!! | TCAAAAAGTGACAATTAAAA+AGG | + | chr3_4:7407782-7407801 | None:intergenic | 20.0% |
!! | TGAGAGATGTTAAATTAATA+AGG | + | chr3_4:7407879-7407898 | None:intergenic | 20.0% |
!!! | TTATCCTTTGTTATTTATTG+CGG | + | chr3_4:7407920-7407939 | None:intergenic | 20.0% |
!! | TGTATACTGTCATTAAAAAT+AGG | + | chr3_4:7408070-7408089 | None:intergenic | 20.0% |
!! | ATTATCTTCTATGTTATTCA+TGG | + | chr3_4:7408189-7408208 | None:intergenic | 20.0% |
!! | TTTAATAACTAATGGTTCTT+GGG | + | chr3_4:7408342-7408361 | None:intergenic | 20.0% |
!!! | TTTTAATAACTAATGGTTCT+TGG | + | chr3_4:7408343-7408362 | None:intergenic | 20.0% |
!!! | ATATGTAGAATTGACTTTAA+AGG | + | chr3_4:7408564-7408583 | None:intergenic | 20.0% |
!! | CAAATTATTGGAAAACAAAA+GGG | + | chr3_4:7409311-7409330 | None:intergenic | 20.0% |
!! | TCAAATTATTGGAAAACAAA+AGG | + | chr3_4:7409312-7409331 | None:intergenic | 20.0% |
!!! | TTTTAGTCTAGTCAAATTAT+TGG | + | chr3_4:7409323-7409342 | None:intergenic | 20.0% |
!! | AATCACAAGAAGAAAATAAA+AGG | + | chr3_4:7409484-7409503 | None:intergenic | 20.0% |
!! | TAATTATCAACAAAATCACA+AGG | + | chr3_4:7409508-7409527 | None:intergenic | 20.0% |
!!! | GATAATTAATCATTCTTTTG+TGG | - | chr3_4:7409520-7409539 | Msa0488140:intron | 20.0% |
!!! | TTTTTTCATAATTTTTTCGC+AGG | + | chr3_4:7409602-7409621 | None:intergenic | 20.0% |
!! | TTCCAACAAAAAAATAAAGA+AGG | - | chr3_4:7409900-7409919 | Msa0488140:intron | 20.0% |
!! | TCCAACAAAAAAATAAAGAA+GGG | - | chr3_4:7409901-7409920 | Msa0488140:intron | 20.0% |
!!! | TAAAACTTATTAGTTCTCAA+TGG | - | chr3_4:7410084-7410103 | Msa0488140:intron | 20.0% |
!!! | AAAACTTATTAGTTCTCAAT+GGG | - | chr3_4:7410085-7410104 | Msa0488140:intron | 20.0% |
!! | TAAACCCTAAATAAATAAGA+GGG | + | chr3_4:7410130-7410149 | None:intergenic | 20.0% |
!! | ATAAACCCTAAATAAATAAG+AGG | + | chr3_4:7410131-7410150 | None:intergenic | 20.0% |
!!! | ATTTATTTAGGGTTTATTTG+TGG | - | chr3_4:7410134-7410153 | Msa0488140:intron | 20.0% |
!!! | TTTATTTAGGGTTTATTTGT+GGG | - | chr3_4:7410135-7410154 | Msa0488140:intron | 20.0% |
!!! | ATATGATATCAAGTTGTTTA+TGG | - | chr3_4:7410247-7410266 | Msa0488140:intron | 20.0% |
!! | AATCAAGAATTTTGTCAAGT+TGG | - | chr3_4:7396613-7396632 | Msa0488140:CDS | 25.0% |
! | TTTGATAGATGAAAGATTCA+TGG | + | chr3_4:7396738-7396757 | None:intergenic | 25.0% |
! | TATCAAATGCATAGTATGTT+TGG | - | chr3_4:7396751-7396770 | Msa0488140:CDS | 25.0% |
! | ATCAAATGCATAGTATGTTT+GGG | - | chr3_4:7396752-7396771 | Msa0488140:CDS | 25.0% |
!! | TTTTAAACATCTACACTATG+AGG | - | chr3_4:7396859-7396878 | Msa0488140:CDS | 25.0% |
! | TGTAACTTACTATTTGTGTT+TGG | - | chr3_4:7396927-7396946 | Msa0488140:intron | 25.0% |
! | CATGAAAAGTTTACTCTATA+TGG | + | chr3_4:7397240-7397259 | None:intergenic | 25.0% |
!!! | CAAGGAATTTTTTTTTTTGC+TGG | - | chr3_4:7397336-7397355 | Msa0488140:intron | 25.0% |
!!! | AGGAATTTTTTTTTTTGCTG+GGG | - | chr3_4:7397338-7397357 | Msa0488140:intron | 25.0% |
! | ACAATGCATAATATATGCAA+AGG | + | chr3_4:7397383-7397402 | None:intergenic | 25.0% |
! | TCGTTAACGAAATATAAGTT+TGG | + | chr3_4:7397506-7397525 | None:intergenic | 25.0% |
! | GAGGGATAAAATTGTAATAT+TGG | + | chr3_4:7397575-7397594 | None:intergenic | 25.0% |
!!! | CGATTGCATTTTTATTTCAT+TGG | + | chr3_4:7397804-7397823 | None:intergenic | 25.0% |
! | TCTGATATTTGTGATGTTTA+AGG | - | chr3_4:7398650-7398669 | Msa0488140:CDS | 25.0% |
! | TTGAAACTCACAAATCAAAA+TGG | + | chr3_4:7398677-7398696 | None:intergenic | 25.0% |
!! | AGGGTAAAATGTAATTTTTC+AGG | - | chr3_4:7398778-7398797 | Msa0488140:CDS | 25.0% |
! | AATGTTCATTTCAAAGTTTC+AGG | - | chr3_4:7398837-7398856 | Msa0488140:CDS | 25.0% |
! | CTTCTAATATAATAGTGAAC+CGG | + | chr3_4:7398958-7398977 | None:intergenic | 25.0% |
! | TAACTCGTATCAAATATTAG+TGG | + | chr3_4:7399067-7399086 | None:intergenic | 25.0% |
! | GTTATCTGAGAAATATTTCT+TGG | - | chr3_4:7399274-7399293 | Msa0488140:intron | 25.0% |
! | GCAAATCAATTAGATACTAA+AGG | + | chr3_4:7399333-7399352 | None:intergenic | 25.0% |
!! | TATAAGTTGAACGAAAAATC+GGG | - | chr3_4:7399379-7399398 | Msa0488140:intron | 25.0% |
!!! | ACTTTTTCTAAATTCAGAAC+CGG | - | chr3_4:7399576-7399595 | Msa0488140:intron | 25.0% |
! | TCTTATCCTTATGTATTGTA+AGG | - | chr3_4:7399675-7399694 | Msa0488140:intron | 25.0% |
! | AACTAACCTTACAATACATA+AGG | + | chr3_4:7399684-7399703 | None:intergenic | 25.0% |
! | AATGTAGCAAAACTTTACAT+AGG | + | chr3_4:7399841-7399860 | None:intergenic | 25.0% |
!! | ATTGATAAGCACAACATTTT+AGG | + | chr3_4:7399890-7399909 | None:intergenic | 25.0% |
! | TTATCAATTATCATTGCTCA+TGG | - | chr3_4:7399902-7399921 | Msa0488140:intron | 25.0% |
! | GGTGTAATATATACAACATT+GGG | - | chr3_4:7400067-7400086 | Msa0488140:intron | 25.0% |
! | GGTGTAATATATACAACATT+GGG | - | chr3_4:7400067-7400086 | Msa0488140:intron | 25.0% |
!!! | CTTTTTAGAACAAGCTAAAA+TGG | - | chr3_4:7400217-7400236 | Msa0488140:intron | 25.0% |
! | GAAATATAAGGAATTACACT+TGG | - | chr3_4:7400471-7400490 | Msa0488140:intron | 25.0% |
! | TACACTTGGCATATTATAAT+TGG | - | chr3_4:7400485-7400504 | Msa0488140:intron | 25.0% |
! | TTATAATTGGTTGAGGTAAA+TGG | - | chr3_4:7400498-7400517 | Msa0488140:intron | 25.0% |
! | TGTGTATAAATAGGAAAATG+AGG | - | chr3_4:7400550-7400569 | Msa0488140:intron | 25.0% |
! | ATGGTTCCTAAAATTGATAA+TGG | + | chr3_4:7400752-7400771 | None:intergenic | 25.0% |
!!! | AATTTTAGGAACCATTACAT+TGG | - | chr3_4:7400757-7400776 | Msa0488140:intron | 25.0% |
!!! | AATTCACCTTTGTTTTTCTT+TGG | - | chr3_4:7401010-7401029 | Msa0488140:intron | 25.0% |
! | GAATTTCCAAAGAAAAACAA+AGG | + | chr3_4:7401019-7401038 | None:intergenic | 25.0% |
! | GTATTTCAACAAACATGAAA+TGG | + | chr3_4:7401725-7401744 | None:intergenic | 25.0% |
!! | TGATTTTCCAAATTTTTTGC+TGG | - | chr3_4:7401836-7401855 | Msa0488140:intron | 25.0% |
! | AGTAACACATGTGTATTTAA+AGG | + | chr3_4:7402554-7402573 | None:intergenic | 25.0% |
!! | GCTCTAATTTCATTTTCAAA+AGG | - | chr3_4:7402899-7402918 | Msa0488140:intron | 25.0% |
!! | CTAATTTCATTTTCAAAAGG+TGG | - | chr3_4:7402902-7402921 | Msa0488140:intron | 25.0% |
!! | CAGAAAATTGATAATCTTCT+TGG | + | chr3_4:7403116-7403135 | None:intergenic | 25.0% |
! | CATTATAAACTAAATGACCA+GGG | + | chr3_4:7403165-7403184 | None:intergenic | 25.0% |
! | TCATTATAAACTAAATGACC+AGG | + | chr3_4:7403166-7403185 | None:intergenic | 25.0% |
!!! | GATTATGAAAGTTAAGTTGA+AGG | - | chr3_4:7403198-7403217 | Msa0488140:intron | 25.0% |
! | AAGAATAAACATAACAGGAA+GGG | - | chr3_4:7403307-7403326 | Msa0488140:intron | 25.0% |
! | TAGTTACAAGAAGTTATTCA+TGG | - | chr3_4:7403431-7403450 | Msa0488140:intron | 25.0% |
! | AGTTACAAGAAGTTATTCAT+GGG | - | chr3_4:7403432-7403451 | Msa0488140:intron | 25.0% |
! | ACTCCATTGTTTCATAATTA+TGG | + | chr3_4:7403494-7403513 | None:intergenic | 25.0% |
!!! | ATCTTTTTCATTCAAACAGT+GGG | - | chr3_4:7403549-7403568 | Msa0488140:intron | 25.0% |
! | AGTAATGTTATGATTCAAAG+TGG | - | chr3_4:7403638-7403657 | Msa0488140:intron | 25.0% |
! | ATGATTCAAAGTGGAATATA+AGG | - | chr3_4:7403647-7403666 | Msa0488140:intron | 25.0% |
! | TACACTTGGCATATTATAAT+TGG | - | chr3_4:7400485-7400504 | Msa0488140:intron | 25.0% |
! | TGTGTATAAATAGGAAAATG+AGG | - | chr3_4:7400550-7400569 | Msa0488140:intron | 25.0% |
! | ATGGTTCCTAAAATTGATAA+TGG | + | chr3_4:7400752-7400771 | None:intergenic | 25.0% |
!! | CAACTTTTATCTAACAATTG+AGG | - | chr3_4:7403962-7403981 | Msa0488140:intron | 25.0% |
!! | TGTTACTTAGTTAGTTAGTA+TGG | - | chr3_4:7404145-7404164 | Msa0488140:intron | 25.0% |
! | GTTACTTAGTTAGTTAGTAT+GGG | - | chr3_4:7404146-7404165 | Msa0488140:intron | 25.0% |
!!! | TTTTTTTGCCAGGTTTATTT+GGG | + | chr3_4:7404407-7404426 | None:intergenic | 25.0% |
! | GGTACAAATAATGAAATATG+TGG | - | chr3_4:7404876-7404895 | Msa0488140:intron | 25.0% |
!!! | AAAATTGATGATGACTTCTT+TGG | - | chr3_4:7404949-7404968 | Msa0488140:intron | 25.0% |
! | ACAAAATTGTCGAAGTTAAT+AGG | + | chr3_4:7405138-7405157 | None:intergenic | 25.0% |
!! | ACAATTTTGTTAGTTATGCT+AGG | - | chr3_4:7405148-7405167 | Msa0488140:intron | 25.0% |
! | TGAGTAAAATTTATACCATG+TGG | + | chr3_4:7405183-7405202 | None:intergenic | 25.0% |
! | TATAGGCCTTAAAAGAAATT+TGG | + | chr3_4:7405528-7405547 | None:intergenic | 25.0% |
!! | AAGTTTAATTAACTTGAGTC+GGG | + | chr3_4:7405578-7405597 | None:intergenic | 25.0% |
!! | GAAGTTTAATTAACTTGAGT+CGG | + | chr3_4:7405579-7405598 | None:intergenic | 25.0% |
! | ATGAAAGAAGATTACAATGA+AGG | + | chr3_4:7405659-7405678 | None:intergenic | 25.0% |
! | TCAGCATTAAAATGTAAGTT+TGG | - | chr3_4:7405790-7405809 | Msa0488140:intron | 25.0% |
! | TAAGTTTGGATATGAGAAAA+GGG | - | chr3_4:7405804-7405823 | Msa0488140:intron | 25.0% |
! | ACAAATTATGAAGGATTACA+AGG | - | chr3_4:7405846-7405865 | Msa0488140:intron | 25.0% |
! | ATATGAAATCAAACTTCCAT+TGG | - | chr3_4:7405969-7405988 | Msa0488140:intron | 25.0% |
!!! | ACAAGTTGATGTTATATCTT+TGG | - | chr3_4:7406516-7406535 | Msa0488140:intron | 25.0% |
!! | ATCTTTGGAGAATTAAAAGT+AGG | - | chr3_4:7406531-7406550 | Msa0488140:intron | 25.0% |
!! | TCTTTGGAGAATTAAAAGTA+GGG | - | chr3_4:7406532-7406551 | Msa0488140:intron | 25.0% |
!! | TTCATGCATTTTATGTCTAT+AGG | - | chr3_4:7406563-7406582 | Msa0488140:intron | 25.0% |
! | AGATAAAATAGAGAATCCTA+TGG | + | chr3_4:7406731-7406750 | None:intergenic | 25.0% |
!! | TAGTTGATGTAACAAAGATA+TGG | - | chr3_4:7406846-7406865 | Msa0488140:intron | 25.0% |
!! | GGAGTACTAAAAAAATGATT+AGG | - | chr3_4:7406882-7406901 | Msa0488140:intron | 25.0% |
!! | GCATTTTATTGTTCTAACTA+AGG | - | chr3_4:7406912-7406931 | Msa0488140:intron | 25.0% |
! | ATTTAATTCCAAAGTTTCAG+AGG | + | chr3_4:7406967-7406986 | None:intergenic | 25.0% |
! | TACACTTTCAATAGCAATAT+AGG | + | chr3_4:7407095-7407114 | None:intergenic | 25.0% |
!!! | TTTTTTTCTTTCCACCTATT+CGG | - | chr3_4:7407155-7407174 | Msa0488140:intron | 25.0% |
! | ATGTTTCAATTGCTATACAT+TGG | - | chr3_4:7407277-7407296 | Msa0488140:intron | 25.0% |
!! | TAGTTTATTATCCCATTTTC+GGG | + | chr3_4:7407309-7407328 | None:intergenic | 25.0% |
! | CCAATTATTCTATATTTGCA+TGG | + | chr3_4:7407491-7407510 | None:intergenic | 25.0% |
! | CCATGCAAATATAGAATAAT+TGG | - | chr3_4:7407488-7407507 | Msa0488140:intron | 25.0% |
! | AGGATTAAAACAAAATACGA+AGG | + | chr3_4:7407521-7407540 | None:intergenic | 25.0% |
!! | ACCAAATTTTGTATATTTGC+AGG | - | chr3_4:7407692-7407711 | Msa0488140:intron | 25.0% |
!! | CCAAATTTTGTATATTTGCA+GGG | - | chr3_4:7407693-7407712 | Msa0488140:intron | 25.0% |
! | AAGTGACAATTAAAAAGGAA+CGG | + | chr3_4:7407777-7407796 | None:intergenic | 25.0% |
!! | GAAACAATTATTGATTGTCT+TGG | + | chr3_4:7407818-7407837 | None:intergenic | 25.0% |
! | TTTGAAAGTGACAGTTAAAT+AGG | - | chr3_4:7407968-7407987 | Msa0488140:intron | 25.0% |
! | AACTTACTGGAAAAAATTCT+TGG | - | chr3_4:7408313-7408332 | Msa0488140:intron | 25.0% |
! | AGGAAAAGAATTTCTTATCA+TGG | + | chr3_4:7408373-7408392 | None:intergenic | 25.0% |
! | GTAAACATTCAATATTTCCT+CGG | + | chr3_4:7408921-7408940 | None:intergenic | 25.0% |
! | GGAAATATTGAATGTTTACA+AGG | - | chr3_4:7408922-7408941 | Msa0488140:intron | 25.0% |
!! | CTATCATGCTTAATGTATTT+TGG | + | chr3_4:7409136-7409155 | None:intergenic | 25.0% |
!! | TAGCTTGTGATATTTAAGTT+TGG | - | chr3_4:7409267-7409286 | Msa0488140:intron | 25.0% |
! | TAGACTAAAAAAACATGTCA+AGG | - | chr3_4:7409333-7409352 | Msa0488140:intron | 25.0% |
!!! | TGAGACAAATAGTTTTGAAA+TGG | - | chr3_4:7409383-7409402 | Msa0488140:intron | 25.0% |
! | CCAACAAAAAAATAAAGAAG+GGG | - | chr3_4:7409902-7409921 | Msa0488140:intron | 25.0% |
!! | TTTGTCCCTCTTATTTATTT+AGG | - | chr3_4:7410122-7410141 | Msa0488140:intron | 25.0% |
!! | TTGTCCCTCTTATTTATTTA+GGG | - | chr3_4:7410123-7410142 | Msa0488140:intron | 25.0% |
!!! | TAGATTTTAGAGAGTTTTGA+AGG | - | chr3_4:7410159-7410178 | Msa0488140:intron | 25.0% |
!! | TATGTTTGCAAATTGGATTT+TGG | + | chr3_4:7410307-7410326 | None:intergenic | 25.0% |
! | AATTTGCAAACATATCCTTA+GGG | - | chr3_4:7410313-7410332 | Msa0488140:intron | 25.0% |
!! | TGATGCATCTTTTGTTAAAA+AGG | + | chr3_4:7410541-7410560 | None:intergenic | 25.0% |
! | AAAAGATGAGTTTCAAGATA+AGG | - | chr3_4:7410578-7410597 | Msa0488140:intron | 25.0% |
!!! | CGAGTTTTTAGAAATTGTTA+AGG | - | chr3_4:7410617-7410636 | Msa0488140:intron | 25.0% |
! | AGAAATTGTTAAGGATTTCT+TGG | - | chr3_4:7410626-7410645 | Msa0488140:CDS | 25.0% |
!! | AAATTAAATGAGCTGTTTCA+AGG | - | chr3_4:7410686-7410705 | Msa0488140:CDS | 25.0% |
!! | AATTAAATGAGCTGTTTCAA+GGG | - | chr3_4:7410687-7410706 | Msa0488140:CDS | 25.0% |
!!! | AGGGCATACAAATTTAATTT+TGG | - | chr3_4:7410706-7410725 | Msa0488140:CDS | 25.0% |
!!! | TTTTGTCAAGTTGGAAAGTT+TGG | - | chr3_4:7396622-7396641 | Msa0488140:CDS | 30.0% |
!! | TTTGTCAAGTTGGAAAGTTT+GGG | - | chr3_4:7396623-7396642 | Msa0488140:CDS | 30.0% |
TCAAATGCATAGTATGTTTG+GGG | - | chr3_4:7396753-7396772 | Msa0488140:CDS | 30.0% | |
ACAAACTGCCAAAATACATT+CGG | - | chr3_4:7396783-7396802 | Msa0488140:CDS | 30.0% | |
TAGAAAAAGACCATACTTGT+TGG | - | chr3_4:7396829-7396848 | Msa0488140:CDS | 30.0% | |
GGAAAATAAAAGGGAAACAT+GGG | + | chr3_4:7396961-7396980 | None:intergenic | 30.0% | |
TGGAAAATAAAAGGGAAACA+TGG | + | chr3_4:7396962-7396981 | None:intergenic | 30.0% | |
TGGTTTATAGAAAAGATGGA+GGG | + | chr3_4:7397086-7397105 | None:intergenic | 30.0% | |
CTATAAACCACGCAAATATT+AGG | - | chr3_4:7397096-7397115 | Msa0488140:intron | 30.0% | |
CAAATATTAGGAAGTCATTG+TGG | - | chr3_4:7397108-7397127 | Msa0488140:intron | 30.0% | |
!! | TTGAGACTTTCATTTTGACA+AGG | - | chr3_4:7397318-7397337 | Msa0488140:intron | 30.0% |
! | CATAATATATGCAAAGGTAC+GGG | + | chr3_4:7397377-7397396 | None:intergenic | 30.0% |
GCATAATATATGCAAAGGTA+CGG | + | chr3_4:7397378-7397397 | None:intergenic | 30.0% | |
!! | TTGGAAGATTTTAAGAACGT+AGG | + | chr3_4:7397556-7397575 | None:intergenic | 30.0% |
GTGACAATAATAAATCAGGT+AGG | + | chr3_4:7397898-7397917 | None:intergenic | 30.0% | |
TACAGCATTTACAATTTCTC+AGG | + | chr3_4:7397939-7397958 | None:intergenic | 30.0% | |
TCCTTAGAAATAATATCTGC+AGG | - | chr3_4:7398050-7398069 | Msa0488140:intron | 30.0% | |
!! | TCCTGCAGATATTATTTCTA+AGG | + | chr3_4:7398054-7398073 | None:intergenic | 30.0% |
CTGCGTATAATGCTATTAAA+TGG | - | chr3_4:7398090-7398109 | Msa0488140:intron | 30.0% | |
ATATCCTTACGTATCTTAAC+TGG | - | chr3_4:7398208-7398227 | Msa0488140:CDS | 30.0% | |
AAATCCTTGGAAAATTATGC+AGG | - | chr3_4:7398236-7398255 | Msa0488140:CDS | 30.0% | |
! | AATACCTGCATAATTTTCCA+AGG | + | chr3_4:7398243-7398262 | None:intergenic | 30.0% |
! | AAATTATGCAGGTATTTCTG+CGG | - | chr3_4:7398247-7398266 | Msa0488140:CDS | 30.0% |
AATAATCCGCAAGAAAATCA+CGG | + | chr3_4:7398278-7398297 | None:intergenic | 30.0% | |
CATGAAATTTGTCAGATTGT+TGG | - | chr3_4:7398323-7398342 | Msa0488140:CDS | 30.0% | |
! | GACTTTTTACACATTTACTG+TGG | - | chr3_4:7398800-7398819 | Msa0488140:CDS | 30.0% |
!!! | GTTTTTTCCTGCATTATTAG+TGG | - | chr3_4:7398896-7398915 | Msa0488140:CDS | 30.0% |
AGTAGTTAATCATCATCCTA+TGG | - | chr3_4:7398920-7398939 | Msa0488140:CDS | 30.0% | |
GTAGTTAATCATCATCCTAT+GGG | - | chr3_4:7398921-7398940 | Msa0488140:CDS | 30.0% | |
TAGTTAATCATCATCCTATG+GGG | - | chr3_4:7398922-7398941 | Msa0488140:CDS | 30.0% | |
CACTCATTAACTTAAATCGA+TGG | - | chr3_4:7399119-7399138 | Msa0488140:CDS | 30.0% | |
ATCTGAGAAATATTTCTTGG+TGG | - | chr3_4:7399277-7399296 | Msa0488140:intron | 30.0% | |
TGGAATAACAAAACTACTAG+AGG | - | chr3_4:7399297-7399316 | Msa0488140:intron | 30.0% | |
!!! | TTATATGACTTGGTCTCTTT+TGG | + | chr3_4:7399364-7399383 | None:intergenic | 30.0% |
TTCGTTCAACTTATATGACT+TGG | + | chr3_4:7399374-7399393 | None:intergenic | 30.0% | |
! | CAATATATGATAGCTTGCAA+AGG | - | chr3_4:7399438-7399457 | Msa0488140:intron | 30.0% |
! | ATCAGCGACAATTTTCTAAT+CGG | + | chr3_4:7399506-7399525 | None:intergenic | 30.0% |
CTGATTCAACCACTATAAAT+AGG | - | chr3_4:7399521-7399540 | Msa0488140:intron | 30.0% | |
AGTTGTTGTCCTATTTATAG+TGG | + | chr3_4:7399533-7399552 | None:intergenic | 30.0% | |
!!! | ACAACAACTGCCATTTTTAT+GGG | - | chr3_4:7399544-7399563 | Msa0488140:intron | 30.0% |
TGATGTGAATCCCATAAAAA+TGG | + | chr3_4:7399557-7399576 | None:intergenic | 30.0% | |
TCTAAACTTTACGTAGGATA+TGG | + | chr3_4:7399750-7399769 | None:intergenic | 30.0% | |
ATCCTACGTAAAGTTTAGAT+CGG | - | chr3_4:7399751-7399770 | Msa0488140:intron | 30.0% | |
GCAAAACTTTACATAGGATA+GGG | + | chr3_4:7399835-7399854 | None:intergenic | 30.0% | |
AGCAAAACTTTACATAGGAT+AGG | + | chr3_4:7399836-7399855 | None:intergenic | 30.0% | |
TATTACACCCACAATTCTTT+AGG | + | chr3_4:7400056-7400075 | None:intergenic | 30.0% | |
GGGTGTAATATATACAACAT+TGG | - | chr3_4:7400066-7400085 | Msa0488140:intron | 30.0% | |
TATTACACCCACAATTCTTT+AGG | + | chr3_4:7400056-7400075 | None:intergenic | 30.0% | |
GGGTGTAATATATACAACAT+TGG | - | chr3_4:7400066-7400085 | Msa0488140:intron | 30.0% | |
AGAGTAAAAGTTTATTCGTG+TGG | + | chr3_4:7400199-7400218 | None:intergenic | 30.0% | |
AGTCTCTACAAAGATTTCAA+AGG | - | chr3_4:7400312-7400331 | Msa0488140:intron | 30.0% | |
GTCTCTACAAAGATTTCAAA+GGG | - | chr3_4:7400313-7400332 | Msa0488140:intron | 30.0% | |
TCTCTACAAAGATTTCAAAG+GGG | - | chr3_4:7400314-7400333 | Msa0488140:intron | 30.0% | |
TTTAATCCCCTATTGTGTAT+GGG | + | chr3_4:7400362-7400381 | None:intergenic | 30.0% | |
TGGCATATTATAATTGGTTG+AGG | - | chr3_4:7400491-7400510 | Msa0488140:intron | 30.0% | |
! | ATATTTGAAGTTGGTTTAGC+GGG | + | chr3_4:7400805-7400824 | None:intergenic | 30.0% |
! | CATATTTGAAGTTGGTTTAG+CGG | + | chr3_4:7400806-7400825 | None:intergenic | 30.0% |
ATTGTGAACTTGATGCATAT+TGG | - | chr3_4:7400842-7400861 | Msa0488140:intron | 30.0% | |
!! | CCAATGCTTGAAGTATTTTT+CGG | + | chr3_4:7400881-7400900 | None:intergenic | 30.0% |
TTTGGAAATTCAAACCTGAA+TGG | - | chr3_4:7401028-7401047 | Msa0488140:intron | 30.0% | |
! | AACAATGGGAATTTGTTCAA+CGG | + | chr3_4:7401256-7401275 | None:intergenic | 30.0% |
! | ATTCTAGGGAAGATGAAAAT+TGG | + | chr3_4:7401392-7401411 | None:intergenic | 30.0% |
GAATTTCACCGTTATATTTC+CGG | + | chr3_4:7401676-7401695 | None:intergenic | 30.0% | |
!! | CTTCACTAGTTAAGTTGTTT+TGG | + | chr3_4:7401809-7401828 | None:intergenic | 30.0% |
ACTGAAATTGCAGTATAACA+AGG | + | chr3_4:7401870-7401889 | None:intergenic | 30.0% | |
!!! | GATGATATGGTTTTTGGTTA+TGG | - | chr3_4:7401897-7401916 | Msa0488140:intron | 30.0% |
TGAGCTCTTACATTTCAAAA+TGG | - | chr3_4:7402025-7402044 | Msa0488140:intron | 30.0% | |
GAGCTCTTACATTTCAAAAT+GGG | - | chr3_4:7402026-7402045 | Msa0488140:intron | 30.0% | |
TGATTGTCACAGTGAATATT+GGG | + | chr3_4:7402431-7402450 | None:intergenic | 30.0% | |
! | ATTTTCGTTTCTCTTACTCA+TGG | - | chr3_4:7402721-7402740 | Msa0488140:intron | 30.0% |
! | TGGATATTCTTTTGTCCATT+GGG | - | chr3_4:7402922-7402941 | Msa0488140:intron | 30.0% |
CATTCTATGAAATCTTAGAC+AGG | - | chr3_4:7403032-7403051 | Msa0488140:intron | 30.0% | |
! | TTTTCAGCAAGTTATATGTG+AGG | - | chr3_4:7403242-7403261 | Msa0488140:intron | 30.0% |
GGTACAAGAATAAACATAAC+AGG | - | chr3_4:7403302-7403321 | Msa0488140:intron | 30.0% | |
CAAGAATAAACATAACAGGA+AGG | - | chr3_4:7403306-7403325 | Msa0488140:intron | 30.0% | |
AGAATAAACATAACAGGAAG+GGG | - | chr3_4:7403308-7403327 | Msa0488140:intron | 30.0% | |
! | TTTGTCTATTAGTTTGACTC+TGG | + | chr3_4:7403380-7403399 | None:intergenic | 30.0% |
ATAGACAAAGCATATGAGAT+TGG | - | chr3_4:7403391-7403410 | Msa0488140:intron | 30.0% | |
TAGACAAAGCATATGAGATT+GGG | - | chr3_4:7403392-7403411 | Msa0488140:intron | 30.0% | |
GTTACAAGAAGTTATTCATG+GGG | - | chr3_4:7403433-7403452 | Msa0488140:intron | 30.0% | |
CGACCATAATTATGAAACAA+TGG | - | chr3_4:7403488-7403507 | Msa0488140:intron | 30.0% | |
GGAAGATTTGATATGTCTAT+AGG | - | chr3_4:7403520-7403539 | Msa0488140:intron | 30.0% | |
TTTGATATGTCTATAGGCAT+AGG | - | chr3_4:7403526-7403545 | Msa0488140:intron | 30.0% | |
!! | GATCTTTTTCATTCAAACAG+TGG | - | chr3_4:7403548-7403567 | Msa0488140:intron | 30.0% |
! | AGAAAAGAACATTTTCCAAC+TGG | + | chr3_4:7403583-7403602 | None:intergenic | 30.0% |
! | AGGACAAGGTTGATTTAAAT+GGG | - | chr3_4:7403612-7403631 | Msa0488140:intron | 30.0% |
GGAATATAAGGAATTACACT+TGG | - | chr3_4:7403659-7403678 | Msa0488140:intron | 30.0% | |
TGGCATATTATAATTGGTTG+AGG | - | chr3_4:7400491-7400510 | Msa0488140:intron | 30.0% | |
!! | TGGGTTAGTTTAGTTAGTTA+AGG | - | chr3_4:7404165-7404184 | Msa0488140:intron | 30.0% |
ACTAACCATTAACCATAGTT+GGG | + | chr3_4:7404197-7404216 | None:intergenic | 30.0% | |
AACTAACCATTAACCATAGT+TGG | + | chr3_4:7404198-7404217 | None:intergenic | 30.0% | |
!!! | CTTTTTTTGCCAGGTTTATT+TGG | + | chr3_4:7404408-7404427 | None:intergenic | 30.0% |
AACAAGTTAAGAAATGGAAG+AGG | + | chr3_4:7404715-7404734 | None:intergenic | 30.0% | |
CAAGTATGACAAATAAACAG+TGG | + | chr3_4:7404783-7404802 | None:intergenic | 30.0% | |
GTGTAATATTTAATAGGGAG+TGG | - | chr3_4:7404971-7404990 | Msa0488140:intron | 30.0% | |
TCAGACGAACTAATTAAGTA+GGG | + | chr3_4:7405115-7405134 | None:intergenic | 30.0% | |
TAAATGATGTCAATGACTGT+TGG | - | chr3_4:7405246-7405265 | Msa0488140:intron | 30.0% | |
! | TTTAAGGCCTATAGATTTGT+TGG | - | chr3_4:7405535-7405554 | Msa0488140:intron | 30.0% |
! | TTAAGGCCTATAGATTTGTT+GGG | - | chr3_4:7405536-7405555 | Msa0488140:intron | 30.0% |
GTAAGTTTGGATATGAGAAA+AGG | - | chr3_4:7405803-7405822 | Msa0488140:intron | 30.0% | |
TTCATATTTAGTTGGCAAGA+AGG | + | chr3_4:7405956-7405975 | None:intergenic | 30.0% | |
ATGTCAAGTAGAATAATGGT+AGG | + | chr3_4:7406105-7406124 | None:intergenic | 30.0% | |
ACACATGTCAAGTAGAATAA+TGG | + | chr3_4:7406109-7406128 | None:intergenic | 30.0% | |
TGATAGATTACAGCAAAAAG+CGG | + | chr3_4:7406177-7406196 | None:intergenic | 30.0% | |
TTCTCTCAATACAATAACGA+TGG | + | chr3_4:7406242-7406261 | None:intergenic | 30.0% | |
AGAAGTGAGTGTAAGATTAA+GGG | - | chr3_4:7406258-7406277 | Msa0488140:intron | 30.0% | |
CTCATAGTTTAACGATAAGT+TGG | - | chr3_4:7406317-7406336 | Msa0488140:intron | 30.0% | |
!! | TAGTTTAACGATAAGTTGGT+AGG | - | chr3_4:7406321-7406340 | Msa0488140:intron | 30.0% |
!! | AGTTTAACGATAAGTTGGTA+GGG | - | chr3_4:7406322-7406341 | Msa0488140:intron | 30.0% |
TTAGGGGAAATCTTGTAAAT+TGG | - | chr3_4:7406356-7406375 | Msa0488140:intron | 30.0% | |
! | ATAATAGAAAGGTACACGAT+TGG | - | chr3_4:7406430-7406449 | Msa0488140:intron | 30.0% |
! | CTTTGGAGAATTAAAAGTAG+GGG | - | chr3_4:7406533-7406552 | Msa0488140:intron | 30.0% |
ATATGACATTGTTCAACCAT+AGG | - | chr3_4:7406712-7406731 | Msa0488140:intron | 30.0% | |
ATCAACTAAAAAACACACAG+TGG | + | chr3_4:7406834-7406853 | None:intergenic | 30.0% | |
TGATGTAACAAAGATATGGA+AGG | - | chr3_4:7406850-7406869 | Msa0488140:intron | 30.0% | |
! | AGATATGGAAGGTATATCTT+TGG | - | chr3_4:7406861-7406880 | Msa0488140:intron | 30.0% |
AGTTGGAAAACAATAGAAGA+GGG | + | chr3_4:7407025-7407044 | None:intergenic | 30.0% | |
!!! | TCATTTTAGTCCTTGTTTTG+AGG | - | chr3_4:7407580-7407599 | Msa0488140:intron | 30.0% |
!!! | CATTTTAGTCCTTGTTTTGA+GGG | - | chr3_4:7407581-7407600 | Msa0488140:intron | 30.0% |
AGGACTAAAACAAAATACCA+AGG | - | chr3_4:7407663-7407682 | Msa0488140:intron | 30.0% | |
CCCTGCAAATATACAAAATT+TGG | + | chr3_4:7407696-7407715 | None:intergenic | 30.0% | |
TCCAAAAGAGACACTTAAAA+AGG | - | chr3_4:7408004-7408023 | Msa0488140:intron | 30.0% | |
!!! | TCCTTTTTAAGTGTCTCTTT+TGG | + | chr3_4:7408008-7408027 | None:intergenic | 30.0% |
AAGAGACACTTAAAAAGGAA+CGG | - | chr3_4:7408009-7408028 | Msa0488140:intron | 30.0% | |
! | AAGATAATTGTCCATTTTCC+TGG | - | chr3_4:7408201-7408220 | Msa0488140:intron | 30.0% |
! | AGATAATTGTCCATTTTCCT+GGG | - | chr3_4:7408202-7408221 | Msa0488140:intron | 30.0% |
! | TCTTCGAGTGATAAACTTTT+CGG | + | chr3_4:7408412-7408431 | None:intergenic | 30.0% |
TAAGTACCAGAATTGATTGA+TGG | + | chr3_4:7408435-7408454 | None:intergenic | 30.0% | |
TTGGGTTACATATTTAACAG+TGG | - | chr3_4:7408694-7408713 | Msa0488140:intron | 30.0% | |
TGGGTTACATATTTAACAGT+GGG | - | chr3_4:7408695-7408714 | Msa0488140:intron | 30.0% | |
!!! | CATTGCCTTATTTTATGCTT+CGG | - | chr3_4:7408991-7409010 | Msa0488140:intron | 30.0% |
!!! | ATTGCCTTATTTTATGCTTC+GGG | - | chr3_4:7408992-7409011 | Msa0488140:intron | 30.0% |
TAAACACACTTTACATGTTG+TGG | + | chr3_4:7409095-7409114 | None:intergenic | 30.0% | |
ACAACATGTAAAGTGTGTTT+AGG | - | chr3_4:7409094-7409113 | Msa0488140:intron | 30.0% | |
CAACATGTAAAGTGTGTTTA+GGG | - | chr3_4:7409095-7409114 | Msa0488140:intron | 30.0% | |
AACATGTAAAGTGTGTTTAG+GGG | - | chr3_4:7409096-7409115 | Msa0488140:intron | 30.0% | |
TACATTAAGCATGATAGAAC+TGG | - | chr3_4:7409139-7409158 | Msa0488140:intron | 30.0% | |
! | TTTTCTCCAAATGAGTAACA+TGG | - | chr3_4:7409229-7409248 | Msa0488140:intron | 30.0% |
CAATAACCATGTTACTCATT+TGG | + | chr3_4:7409238-7409257 | None:intergenic | 30.0% | |
AAAAAACATGTCAAGGTGTA+TGG | - | chr3_4:7409340-7409359 | Msa0488140:intron | 30.0% | |
CAAAACAAAACCACAAAAGA+TGG | + | chr3_4:7409435-7409454 | None:intergenic | 30.0% | |
!!! | CATCTTTTGTGGTTTTGTTT+TGG | - | chr3_4:7409433-7409452 | Msa0488140:intron | 30.0% |
AACTGCAATGAATCCAAATT+CGG | + | chr3_4:7409805-7409824 | None:intergenic | 30.0% | |
!!! | CCCCTTCTTTATTTTTTTGT+TGG | + | chr3_4:7409905-7409924 | None:intergenic | 30.0% |
GACGTTAAAAAGAACGAATA+AGG | - | chr3_4:7410061-7410080 | Msa0488140:intron | 30.0% | |
!!! | GAGTTTTGAAGGAAAAACAT+TGG | - | chr3_4:7410170-7410189 | Msa0488140:intron | 30.0% |
!! | TTTTGAAGGAAAAACATTGG+AGG | - | chr3_4:7410173-7410192 | Msa0488140:intron | 30.0% |
! | TTTGCAAATTGGATTTTGGA+GGG | + | chr3_4:7410303-7410322 | None:intergenic | 30.0% |
CTAAGGATATGTTTGCAAAT+TGG | + | chr3_4:7410314-7410333 | None:intergenic | 30.0% | |
CAATTTGCAAACATATCCTT+AGG | - | chr3_4:7410312-7410331 | Msa0488140:intron | 30.0% | |
AAACATATCCTTAGGGTTTA+AGG | - | chr3_4:7410320-7410339 | Msa0488140:intron | 30.0% | |
TAATGCTAATGCATTCTCAA+AGG | + | chr3_4:7410469-7410488 | None:intergenic | 30.0% | |
ATGAGTTTCAAGATAAGGAT+AGG | - | chr3_4:7410583-7410602 | Msa0488140:intron | 30.0% | |
TGAGTTTCAAGATAAGGATA+GGG | - | chr3_4:7410584-7410603 | Msa0488140:intron | 30.0% | |
AATGTATGTCAAGAACTAAC+CGG | + | chr3_4:7410789-7410808 | None:intergenic | 30.0% | |
! | ATGCATTGATAAACCCTGAA+AGG | - | chr3_4:7396684-7396703 | Msa0488140:CDS | 35.0% |
TTTCAAAACTCCACCTTTCA+GGG | + | chr3_4:7396700-7396719 | None:intergenic | 35.0% | |
CAAATGCATAGTATGTTTGG+GGG | - | chr3_4:7396754-7396773 | Msa0488140:CDS | 35.0% | |
! | AAAGACCATACTTGTTGGAT+TGG | - | chr3_4:7396834-7396853 | Msa0488140:CDS | 35.0% |
AAACACCAATCCAACAAGTA+TGG | + | chr3_4:7396842-7396861 | None:intergenic | 35.0% | |
TAAACATCTACACTATGAGG+TGG | - | chr3_4:7396862-7396881 | Msa0488140:CDS | 35.0% | |
GTTTATAGAAAAGATGGAGG+GGG | + | chr3_4:7397084-7397103 | None:intergenic | 35.0% | |
GGTTTATAGAAAAGATGGAG+GGG | + | chr3_4:7397085-7397104 | None:intergenic | 35.0% | |
GTGGTTTATAGAAAAGATGG+AGG | + | chr3_4:7397087-7397106 | None:intergenic | 35.0% | |
TGCGTGGTTTATAGAAAAGA+TGG | + | chr3_4:7397090-7397109 | None:intergenic | 35.0% | |
ATGACTTCCTAATATTTGCG+TGG | + | chr3_4:7397106-7397125 | None:intergenic | 35.0% | |
TATTAGGAAGTCATTGTGGA+AGG | - | chr3_4:7397112-7397131 | Msa0488140:intron | 35.0% | |
ATTAGGAAGTCATTGTGGAA+GGG | - | chr3_4:7397113-7397132 | Msa0488140:intron | 35.0% | |
!!! | ATTTTTTTTTTTGCTGGGGC+TGG | - | chr3_4:7397342-7397361 | Msa0488140:intron | 35.0% |
!!! | TTTTTTTTTTTGCTGGGGCT+GGG | - | chr3_4:7397343-7397362 | Msa0488140:intron | 35.0% |
! | TGAGTTTAACTCAGTTGGTA+TGG | + | chr3_4:7397406-7397425 | None:intergenic | 35.0% |
! | CTCATGAGGACATTTTGAAT+AGG | - | chr3_4:7397422-7397441 | Msa0488140:intron | 35.0% |
! | GAATTTTGTGATCTCGAAGA+GGG | + | chr3_4:7397593-7397612 | None:intergenic | 35.0% |
CTCTTCGAGATCACAAAATT+CGG | - | chr3_4:7397592-7397611 | Msa0488140:intron | 35.0% | |
AATATGCGTAGGAATACCTA+AGG | - | chr3_4:7397677-7397696 | Msa0488140:intron | 35.0% | |
! | AATACCTAAGGATTTTGCAG+TGG | - | chr3_4:7397689-7397708 | Msa0488140:intron | 35.0% |
TTATCCACTGCAAAATCCTT+AGG | + | chr3_4:7397696-7397715 | None:intergenic | 35.0% | |
GAGTTATAGAGTGTGAAAAC+AGG | + | chr3_4:7397758-7397777 | None:intergenic | 35.0% | |
ATTATACGCAGCAAAATCCT+CGG | + | chr3_4:7398081-7398100 | None:intergenic | 35.0% | |
! | TTTTCCTGCGGATTTACATA+CGG | - | chr3_4:7398164-7398183 | Msa0488140:intron | 35.0% |
TTAGCCAGTTAAGATACGTA+AGG | + | chr3_4:7398215-7398234 | None:intergenic | 35.0% | |
TTAACTGGCTAAGAAATCCT+TGG | - | chr3_4:7398223-7398242 | Msa0488140:CDS | 35.0% | |
! | AATTATGCAGGTATTTCTGC+GGG | - | chr3_4:7398248-7398267 | Msa0488140:CDS | 35.0% |
! | TGTGAGTTTCAACTTTGAAG+TGG | - | chr3_4:7398685-7398704 | Msa0488140:intron | 35.0% |
! | TTTTGGATTGATCAATTCGG+AGG | + | chr3_4:7398759-7398778 | None:intergenic | 35.0% |
TCCGAATTGATCAATCCAAA+AGG | - | chr3_4:7398758-7398777 | Msa0488140:CDS | 35.0% | |
! | CCCTTTTGGATTGATCAATT+CGG | + | chr3_4:7398762-7398781 | None:intergenic | 35.0% |
CCGAATTGATCAATCCAAAA+GGG | - | chr3_4:7398759-7398778 | Msa0488140:CDS | 35.0% | |
AGATCAGCAAAGCGAATTTA+AGG | - | chr3_4:7399403-7399422 | Msa0488140:intron | 35.0% | |
!!! | GACAACAACTGCCATTTTTA+TGG | - | chr3_4:7399543-7399562 | Msa0488140:intron | 35.0% |
TTCTAAATTCAGAACCGGAA+AGG | - | chr3_4:7399581-7399600 | Msa0488140:intron | 35.0% | |
TCTAAATTCAGAACCGGAAA+GGG | - | chr3_4:7399582-7399601 | Msa0488140:intron | 35.0% | |
! | GAAGAGATTGATTCTTGAAG+TGG | + | chr3_4:7399655-7399674 | None:intergenic | 35.0% |
ATCCGATCTAAACTTTACGT+AGG | + | chr3_4:7399756-7399775 | None:intergenic | 35.0% | |
GTATGGGATTCACTATGTAT+GGG | + | chr3_4:7400346-7400365 | None:intergenic | 35.0% | |
TGTATGGGATTCACTATGTA+TGG | + | chr3_4:7400347-7400366 | None:intergenic | 35.0% | |
TAGTGAATCCCATACACAAT+AGG | - | chr3_4:7400351-7400370 | Msa0488140:intron | 35.0% | |
AGTGAATCCCATACACAATA+GGG | - | chr3_4:7400352-7400371 | Msa0488140:intron | 35.0% | |
GTTTAATCCCCTATTGTGTA+TGG | + | chr3_4:7400363-7400382 | None:intergenic | 35.0% | |
TTTATACACAACCCAAGCTT+AGG | + | chr3_4:7400540-7400559 | None:intergenic | 35.0% | |
! | AGCTTGGGTTGTGTATAAAT+AGG | - | chr3_4:7400541-7400560 | Msa0488140:intron | 35.0% |
!! | AGATGAAAGCACCAATGTAA+TGG | + | chr3_4:7400771-7400790 | None:intergenic | 35.0% |
CGCTAAACCAACTTCAAATA+TGG | - | chr3_4:7400804-7400823 | Msa0488140:intron | 35.0% | |
! | GGAATCACCATATTTGAAGT+TGG | + | chr3_4:7400814-7400833 | None:intergenic | 35.0% |
TCAAGTTCACAATCAAACAC+AGG | + | chr3_4:7400835-7400854 | None:intergenic | 35.0% | |
TGAACTTGATGCATATTGGT+GGG | - | chr3_4:7400846-7400865 | Msa0488140:intron | 35.0% | |
!! | TTGAAGTATTTTTCGGTGCA+AGG | + | chr3_4:7400874-7400893 | None:intergenic | 35.0% |
CCGAAAAATACTTCAAGCAT+TGG | - | chr3_4:7400878-7400897 | Msa0488140:intron | 35.0% | |
ATTCATCCCAATTCATCCAT+AGG | + | chr3_4:7400993-7401012 | None:intergenic | 35.0% | |
ATCAACGAAAATCGTAGTGT+CGG | + | chr3_4:7401199-7401218 | None:intergenic | 35.0% | |
ATCTTCCCTAGAATTCATGT+TGG | - | chr3_4:7401398-7401417 | Msa0488140:CDS | 35.0% | |
TTTGATCCTGGAGGAAATTT+CGG | - | chr3_4:7401513-7401532 | Msa0488140:CDS | 35.0% | |
TGTATCACTTGAAATTCCAC+GGG | + | chr3_4:7401612-7401631 | None:intergenic | 35.0% | |
CTGTATCACTTGAAATTCCA+CGG | + | chr3_4:7401613-7401632 | None:intergenic | 35.0% | |
GAAATTCATCACAACGATGT+CGG | - | chr3_4:7401689-7401708 | Msa0488140:intron | 35.0% | |
TAACATTCCAATCTCACTGA+GGG | + | chr3_4:7401748-7401767 | None:intergenic | 35.0% | |
AGAATTGTCATAAGAGTGGT+GGG | + | chr3_4:7401777-7401796 | None:intergenic | 35.0% | |
TAGAATTGTCATAAGAGTGG+TGG | + | chr3_4:7401778-7401797 | None:intergenic | 35.0% | |
TGGTAGAATTGTCATAAGAG+TGG | + | chr3_4:7401781-7401800 | None:intergenic | 35.0% | |
CTCTTATGACAATTCTACCA+AGG | - | chr3_4:7401781-7401800 | Msa0488140:intron | 35.0% | |
!!! | GTTAAGTTGTTTTGGTACCT+TGG | + | chr3_4:7401801-7401820 | None:intergenic | 35.0% |
!!! | TCCAAATTTTTTGCTGGTGT+TGG | - | chr3_4:7401842-7401861 | Msa0488140:intron | 35.0% |
ACCAACACCAGCAAAAAATT+TGG | + | chr3_4:7401846-7401865 | None:intergenic | 35.0% | |
! | CTTCGTGATGATATGGTTTT+TGG | - | chr3_4:7401891-7401910 | Msa0488140:intron | 35.0% |
!!! | TGGTTTTTGGTTATGGAACA+AGG | - | chr3_4:7401904-7401923 | Msa0488140:intron | 35.0% |
TTTGATGAAATGGTTCTTCC+AGG | - | chr3_4:7401978-7401997 | Msa0488140:intron | 35.0% | |
ACTGAAAAATAGCATGTTCC+TGG | + | chr3_4:7401999-7402018 | None:intergenic | 35.0% | |
AATTGTGTTCACACTGTTGT+TGG | - | chr3_4:7402083-7402102 | Msa0488140:intron | 35.0% | |
ATTGTGTTCACACTGTTGTT+GGG | - | chr3_4:7402084-7402103 | Msa0488140:intron | 35.0% | |
!! | ATCAAGAGGTACTGTGAAAT+AGG | + | chr3_4:7402111-7402130 | None:intergenic | 35.0% |
! | TTAGCTCTCAAATAGTTTGG+AGG | + | chr3_4:7402270-7402289 | None:intergenic | 35.0% |
! | TGCTTAGCTCTCAAATAGTT+TGG | + | chr3_4:7402273-7402292 | None:intergenic | 35.0% |
GTGATTGTCACAGTGAATAT+TGG | + | chr3_4:7402432-7402451 | None:intergenic | 35.0% | |
ACTTCAAATCAAGGCATACA+CGG | + | chr3_4:7402454-7402473 | None:intergenic | 35.0% | |
TGTGCATGAACTTCAAATCA+AGG | + | chr3_4:7402463-7402482 | None:intergenic | 35.0% | |
! | TGATTTGAAGTTCATGCACA+CGG | - | chr3_4:7402463-7402482 | Msa0488140:intron | 35.0% |
CTTGAAGCTTCTCAACTAAT+GGG | + | chr3_4:7402529-7402548 | None:intergenic | 35.0% | |
AATGTAATCAAGCCCAAGAT+AGG | + | chr3_4:7402609-7402628 | None:intergenic | 35.0% | |
AATTCACCACTTTATGACAG+AGG | + | chr3_4:7402793-7402812 | None:intergenic | 35.0% | |
! | TTTGTTGTGTGCAATGTAGT+TGG | - | chr3_4:7402839-7402858 | Msa0488140:intron | 35.0% |
ATTAGAGCTACACTGACAAT+TGG | + | chr3_4:7402887-7402906 | None:intergenic | 35.0% | |
! | GTGGATATTCTTTTGTCCAT+TGG | - | chr3_4:7402921-7402940 | Msa0488140:intron | 35.0% |
! | TATTCTTTTGTCCATTGGGA+AGG | - | chr3_4:7402926-7402945 | Msa0488140:intron | 35.0% |
! | TTTCAAGTAAACCTTCCCAA+TGG | + | chr3_4:7402940-7402959 | None:intergenic | 35.0% |
!! | ATTTTGCATTTGGAGTAGCT+TGG | - | chr3_4:7403281-7403300 | Msa0488140:intron | 35.0% |
AAAGCATATGAGATTGGGAA+TGG | - | chr3_4:7403397-7403416 | Msa0488140:intron | 35.0% | |
ATATGAGATTGGGAATGGTA+TGG | - | chr3_4:7403402-7403421 | Msa0488140:intron | 35.0% | |
TATGAGATTGGGAATGGTAT+GGG | - | chr3_4:7403403-7403422 | Msa0488140:intron | 35.0% | |
ATGAAACAATGGAGTTCATG+TGG | - | chr3_4:7403499-7403518 | Msa0488140:intron | 35.0% | |
TTAAATCAACCTTGTCCTCA+AGG | + | chr3_4:7403610-7403629 | None:intergenic | 35.0% | |
! | GAGGACAAGGTTGATTTAAA+TGG | - | chr3_4:7403611-7403630 | Msa0488140:intron | 35.0% |
! | GGACAAGGTTGATTTAAATG+GGG | - | chr3_4:7403613-7403632 | Msa0488140:intron | 35.0% |
! | GACAAGGTTGATTTAAATGG+GGG | - | chr3_4:7403614-7403633 | Msa0488140:intron | 35.0% |
! | ACAAGGTTGATTTAAATGGG+GGG | - | chr3_4:7403615-7403634 | Msa0488140:intron | 35.0% |
TTTATACACAACCCAAGCTT+AGG | + | chr3_4:7400540-7400559 | None:intergenic | 35.0% | |
! | AGCTTGGGTTGTGTATAAAT+AGG | - | chr3_4:7400541-7400560 | Msa0488140:intron | 35.0% |
! | TTAAGGTGTTAACCCAACTA+TGG | - | chr3_4:7404182-7404201 | Msa0488140:intron | 35.0% |
GTTAACCCAACTATGGTTAA+TGG | - | chr3_4:7404189-7404208 | Msa0488140:intron | 35.0% | |
TCAAGATACCCAAATAAACC+TGG | - | chr3_4:7404396-7404415 | Msa0488140:intron | 35.0% | |
!!! | GATAGTACTCTTTTTTTGCC+AGG | + | chr3_4:7404417-7404436 | None:intergenic | 35.0% |
CTTTGTTACTGCATGCAAAA+AGG | - | chr3_4:7404660-7404679 | Msa0488140:intron | 35.0% | |
TGGAAGAGGAAGTTAAGAAA+AGG | + | chr3_4:7404701-7404720 | None:intergenic | 35.0% | |
AGAAATCTACACACAAGTAG+AGG | - | chr3_4:7405076-7405095 | Msa0488140:intron | 35.0% | |
GTCAGACGAACTAATTAAGT+AGG | + | chr3_4:7405116-7405135 | None:intergenic | 35.0% | |
GTTAGTTATGCTAGGAATTG+TGG | - | chr3_4:7405156-7405175 | Msa0488140:intron | 35.0% | |
GATTACAATGAAGGAAGAGA+AGG | + | chr3_4:7405650-7405669 | None:intergenic | 35.0% | |
GAGAGATTCTTCATCTTGAA+AGG | + | chr3_4:7405745-7405764 | None:intergenic | 35.0% | |
! | ATTAAGAGTGTACGAGTTGT+TGG | - | chr3_4:7405897-7405916 | Msa0488140:intron | 35.0% |
GAGAAGTGAGTGTAAGATTA+AGG | - | chr3_4:7406257-7406276 | Msa0488140:intron | 35.0% | |
! | CACTTTGCATTTGTTGAGTA+TGG | - | chr3_4:7406294-7406313 | Msa0488140:intron | 35.0% |
CAAACTTTGTGATCGAATCT+CGG | - | chr3_4:7406454-7406473 | Msa0488140:intron | 35.0% | |
AAACTTTGTGATCGAATCTC+GGG | - | chr3_4:7406455-7406474 | Msa0488140:intron | 35.0% | |
GAGAATTAAAAGTAGGGGTT+TGG | - | chr3_4:7406538-7406557 | Msa0488140:intron | 35.0% | |
!! | GAATGAGAAGTATTCTGAGT+TGG | + | chr3_4:7406759-7406778 | None:intergenic | 35.0% |
!! | GATAGTTTCCTCTGAAACTT+TGG | - | chr3_4:7406956-7406975 | Msa0488140:intron | 35.0% |
! | TCATTGTTAGTCTCATCCTT+TGG | - | chr3_4:7406996-7407015 | Msa0488140:intron | 35.0% |
GAGTTGGAAAACAATAGAAG+AGG | + | chr3_4:7407026-7407045 | None:intergenic | 35.0% | |
AATAGCATATGAGTATGAGC+TGG | + | chr3_4:7407063-7407082 | None:intergenic | 35.0% | |
AGTGTATGAACATTCGCATT+AGG | - | chr3_4:7407109-7407128 | Msa0488140:intron | 35.0% | |
AGAATGTTAATTTCCCTCTG+AGG | - | chr3_4:7407237-7407256 | Msa0488140:intron | 35.0% | |
! | TAGCAATTTTCATCCTCAGA+GGG | + | chr3_4:7407253-7407272 | None:intergenic | 35.0% |
! | ATAGCAATTTTCATCCTCAG+AGG | + | chr3_4:7407254-7407273 | None:intergenic | 35.0% |
!! | TGTTGGTCACCATTTTTGTT+TGG | - | chr3_4:7407341-7407360 | Msa0488140:intron | 35.0% |
!! | GTTGGTCACCATTTTTGTTT+GGG | - | chr3_4:7407342-7407361 | Msa0488140:intron | 35.0% |
AAATGATCCCTGCAAATATC+TGG | - | chr3_4:7407421-7407440 | Msa0488140:intron | 35.0% | |
CAAAACACCAGATATTTGCA+GGG | + | chr3_4:7407431-7407450 | None:intergenic | 35.0% | |
!! | GATTTTAGTCCCTCAAAACA+AGG | + | chr3_4:7407593-7407612 | None:intergenic | 35.0% |
!!! | CAAAATTTGGTTTTGGTCCT+TGG | + | chr3_4:7407683-7407702 | None:intergenic | 35.0% |
TGACAATTAAAAAGGAACGG+AGG | + | chr3_4:7407774-7407793 | None:intergenic | 35.0% | |
CTCTCCGCAATAAATAACAA+AGG | - | chr3_4:7407913-7407932 | Msa0488140:intron | 35.0% | |
ATCACAACAATGACAAGGTT+AGG | + | chr3_4:7408154-7408173 | None:intergenic | 35.0% | |
TGTGTATCACAACAATGACA+AGG | + | chr3_4:7408159-7408178 | None:intergenic | 35.0% | |
TTGTCATTGTTGTGATACAC+AGG | - | chr3_4:7408158-7408177 | Msa0488140:intron | 35.0% | |
TGTCATTGTTGTGATACACA+GGG | - | chr3_4:7408159-7408178 | Msa0488140:intron | 35.0% | |
TCAAGAATATCCCAGGAAAA+TGG | + | chr3_4:7408215-7408234 | None:intergenic | 35.0% | |
AATGACATCAAGAATATCCC+AGG | + | chr3_4:7408222-7408241 | None:intergenic | 35.0% | |
ACACGCAAGAAAATTGAAAG+AGG | + | chr3_4:7408268-7408287 | None:intergenic | 35.0% | |
GGGAGTTTCATAAAACTTAC+TGG | - | chr3_4:7408300-7408319 | Msa0488140:intron | 35.0% | |
! | TTCTGGTACTTAGCCTATTT+TGG | - | chr3_4:7408443-7408462 | Msa0488140:intron | 35.0% |
AGCGGATATTTGATCATGAA+AGG | - | chr3_4:7408473-7408492 | Msa0488140:intron | 35.0% | |
GCGGATATTTGATCATGAAA+GGG | - | chr3_4:7408474-7408493 | Msa0488140:intron | 35.0% | |
CGGATATTTGATCATGAAAG+GGG | - | chr3_4:7408475-7408494 | Msa0488140:intron | 35.0% | |
! | TACCATGTCTTACTTGCTTT+TGG | - | chr3_4:7408590-7408609 | Msa0488140:intron | 35.0% |
TGTCTATCAGTCTCGAAATT+TGG | - | chr3_4:7408670-7408689 | Msa0488140:intron | 35.0% | |
GTCTATCAGTCTCGAAATTT+GGG | - | chr3_4:7408671-7408690 | Msa0488140:intron | 35.0% | |
ATTTAACAGTGGGAAATCCA+TGG | - | chr3_4:7408705-7408724 | Msa0488140:intron | 35.0% | |
TATATATGTTGTCACCAACG+AGG | - | chr3_4:7408760-7408779 | Msa0488140:intron | 35.0% | |
TGTGAAGTAGATGTTACATC+GGG | + | chr3_4:7408848-7408867 | None:intergenic | 35.0% | |
GTGTGAAGTAGATGTTACAT+CGG | + | chr3_4:7408849-7408868 | None:intergenic | 35.0% | |
TAACATCTACTTCACACCTA+AGG | - | chr3_4:7408852-7408871 | Msa0488140:intron | 35.0% | |
AACCATGAATTATGTCAAGC+TGG | - | chr3_4:7408955-7408974 | Msa0488140:intron | 35.0% | |
TTCCAGCTTGACATAATTCA+TGG | + | chr3_4:7408960-7408979 | None:intergenic | 35.0% | |
TTATGTCAAGCTGGAAACTT+TGG | - | chr3_4:7408964-7408983 | Msa0488140:intron | 35.0% | |
TATGTCAAGCTGGAAACTTT+GGG | - | chr3_4:7408965-7408984 | Msa0488140:intron | 35.0% | |
!!! | TTGCCTTATTTTATGCTTCG+GGG | - | chr3_4:7408993-7409012 | Msa0488140:intron | 35.0% |
TGTTGTGGATGAAAGATTGA+TGG | + | chr3_4:7409080-7409099 | None:intergenic | 35.0% | |
CTTTAGACATCAACGATATG+AGG | - | chr3_4:7409201-7409220 | Msa0488140:intron | 35.0% | |
ACTGCTATAAAAGCCGAATT+TGG | - | chr3_4:7409789-7409808 | Msa0488140:intron | 35.0% | |
GAACTTTGTGAGTAAACTTC+AGG | - | chr3_4:7409924-7409943 | Msa0488140:intron | 35.0% | |
! | ATTCGTTCTTTTTAACGTCG+AGG | + | chr3_4:7410060-7410079 | None:intergenic | 35.0% |
! | TATTAGTTCTCAATGGGTGA+TGG | - | chr3_4:7410091-7410110 | Msa0488140:intron | 35.0% |
! | GTTTGCAAATTGGATTTTGG+AGG | + | chr3_4:7410304-7410323 | None:intergenic | 35.0% |
GTGTTAAACCTTAAACCCTA+AGG | + | chr3_4:7410331-7410350 | None:intergenic | 35.0% | |
AAGGAGTTCATCATCTTGAA+GGG | + | chr3_4:7410450-7410469 | None:intergenic | 35.0% | |
AAAGGAGTTCATCATCTTGA+AGG | + | chr3_4:7410451-7410470 | None:intergenic | 35.0% | |
CATTGATAAACCCTGAAAGG+TGG | - | chr3_4:7396687-7396706 | Msa0488140:CDS | 40.0% | |
CTTTCAAAACTCCACCTTTC+AGG | + | chr3_4:7396701-7396720 | None:intergenic | 40.0% | |
! | CGATCTTGCCGAATGTATTT+TGG | + | chr3_4:7396794-7396813 | None:intergenic | 40.0% |
AAAAGGGAAACATGGGAACA+AGG | + | chr3_4:7396954-7396973 | None:intergenic | 40.0% | |
TTAGGAAGTCATTGTGGAAG+GGG | - | chr3_4:7397114-7397133 | Msa0488140:intron | 40.0% | |
CTACTTGTCACAGATAACAG+TGG | + | chr3_4:7397151-7397170 | None:intergenic | 40.0% | |
!!! | TTTTTTTTTTGCTGGGGCTG+GGG | - | chr3_4:7397344-7397363 | Msa0488140:intron | 40.0% |
CCTCATGAGTTTAACTCAGT+TGG | + | chr3_4:7397411-7397430 | None:intergenic | 40.0% | |
CCAACTGAGTTAAACTCATG+AGG | - | chr3_4:7397408-7397427 | Msa0488140:intron | 40.0% | |
! | CGAATTTTGTGATCTCGAAG+AGG | + | chr3_4:7397594-7397613 | None:intergenic | 40.0% |
AGAATTCTGCGCATTTCATG+CGG | - | chr3_4:7397639-7397658 | Msa0488140:intron | 40.0% | |
TCTTGAGAACGAATATGCGT+AGG | - | chr3_4:7397666-7397685 | Msa0488140:intron | 40.0% | |
TGCAGTGGATAATGCTACTA+TGG | - | chr3_4:7397704-7397723 | Msa0488140:intron | 40.0% | |
CAGGAAAAGTGGTAGTTCTT+AGG | + | chr3_4:7397739-7397758 | None:intergenic | 40.0% | |
GAGTGTGAAAACAGGAAAAG+TGG | + | chr3_4:7397750-7397769 | None:intergenic | 40.0% | |
CGCGGTGACAATAATAAATC+AGG | + | chr3_4:7397902-7397921 | None:intergenic | 40.0% | |
TTATACGCAGCAAAATCCTC+GGG | + | chr3_4:7398080-7398099 | None:intergenic | 40.0% | |
GTAATTTCCTGCTGATCATG+TGG | - | chr3_4:7398112-7398131 | Msa0488140:intron | 40.0% | |
GGAAAAGTGGTAGTTACCTT+AGG | + | chr3_4:7398150-7398169 | None:intergenic | 40.0% | |
ATGTAAATCCGCAGGAAAAG+TGG | + | chr3_4:7398163-7398182 | None:intergenic | 40.0% | |
ACTACTGCCACTAATAATGC+AGG | + | chr3_4:7398906-7398925 | None:intergenic | 40.0% | |
GCATTTGTGCTTGCTTTCAT+AGG | - | chr3_4:7399214-7399233 | Msa0488140:intron | 40.0% | |
TCAGCAAAGCGAATTTAAGG+CGG | - | chr3_4:7399406-7399425 | Msa0488140:intron | 40.0% | |
! | TCTTGAAGTGGATTCCTCAA+AGG | + | chr3_4:7399643-7399662 | None:intergenic | 40.0% |
ACACTGCTCCTAAAGAATTG+TGG | - | chr3_4:7400045-7400064 | Msa0488140:intron | 40.0% | |
CACTGCTCCTAAAGAATTGT+GGG | - | chr3_4:7400046-7400065 | Msa0488140:intron | 40.0% | |
ACACTGCTCCTAAAGAATTG+TGG | - | chr3_4:7400045-7400064 | Msa0488140:intron | 40.0% | |
CACTGCTCCTAAAGAATTGT+GGG | - | chr3_4:7400046-7400065 | Msa0488140:intron | 40.0% | |
! | TTCCTAGCATAACTTGTGCA+AGG | + | chr3_4:7400270-7400289 | None:intergenic | 40.0% |
GTGAATCCCATACACAATAG+GGG | - | chr3_4:7400353-7400372 | Msa0488140:intron | 40.0% | |
GTCAGCTACAATCTTATCGA+TGG | + | chr3_4:7400432-7400451 | None:intergenic | 40.0% | |
AGGAAAATGAGGATCACTAG+TGG | - | chr3_4:7400561-7400580 | Msa0488140:intron | 40.0% | |
GGAAAATGAGGATCACTAGT+GGG | - | chr3_4:7400562-7400581 | Msa0488140:intron | 40.0% | |
!! | CTCTACTAGAGAGTACCAAA+GGG | + | chr3_4:7400621-7400640 | None:intergenic | 40.0% |
!! | ACTCTACTAGAGAGTACCAA+AGG | + | chr3_4:7400622-7400641 | None:intergenic | 40.0% |
GTGAACTTGATGCATATTGG+TGG | - | chr3_4:7400845-7400864 | Msa0488140:intron | 40.0% | |
ATACCAGAGACGCAAAAGAT+GGG | - | chr3_4:7400904-7400923 | Msa0488140:intron | 40.0% | |
!!! | TGAATGGCGTGTCATTTTAC+CGG | - | chr3_4:7401044-7401063 | Msa0488140:intron | 40.0% |
! | CACTACGATTTTCGTTGATC+AGG | - | chr3_4:7401200-7401219 | Msa0488140:intron | 40.0% |
TGATGAGCAATCAACTGTAG+CGG | - | chr3_4:7401344-7401363 | Msa0488140:CDS | 40.0% | |
GGTCACCAACATGAATTCTA+GGG | + | chr3_4:7401406-7401425 | None:intergenic | 40.0% | |
AGGTCACCAACATGAATTCT+AGG | + | chr3_4:7401407-7401426 | None:intergenic | 40.0% | |
TGTTGTGGATGTAGTGTTCA+CGG | + | chr3_4:7401469-7401488 | None:intergenic | 40.0% | |
ATCTTGTGGCAGTTTCGATA+CGG | + | chr3_4:7401588-7401607 | None:intergenic | 40.0% | |
AACATTCCAATCTCACTGAG+GGG | + | chr3_4:7401747-7401766 | None:intergenic | 40.0% | |
CTAACATTCCAATCTCACTG+AGG | + | chr3_4:7401749-7401768 | None:intergenic | 40.0% | |
GAATTGTCATAAGAGTGGTG+GGG | + | chr3_4:7401776-7401795 | None:intergenic | 40.0% | |
TTCAGTGCTTCGTGATGATA+TGG | - | chr3_4:7401884-7401903 | Msa0488140:intron | 40.0% | |
TTCATCAAACACGTAGCAGT+TGG | + | chr3_4:7401967-7401986 | None:intergenic | 40.0% | |
CTGCTACGTGTTTGATGAAA+TGG | - | chr3_4:7401968-7401987 | Msa0488140:intron | 40.0% | |
GCTAAGCAGATGTTGTGATA+TGG | - | chr3_4:7402285-7402304 | Msa0488140:intron | 40.0% | |
! | TTTAGCTTCCTACCTCTTTG+TGG | - | chr3_4:7402349-7402368 | Msa0488140:intron | 40.0% |
TTCCTACCTCTTTGTGGTTA+TGG | - | chr3_4:7402355-7402374 | Msa0488140:intron | 40.0% | |
ATCCATAACCACAAAGAGGT+AGG | + | chr3_4:7402360-7402379 | None:intergenic | 40.0% | |
TTTGTGGTTATGGATCTGCT+AGG | - | chr3_4:7402365-7402384 | Msa0488140:intron | 40.0% | |
GATCTGCTAGGTCTTAAGAT+TGG | - | chr3_4:7402377-7402396 | Msa0488140:intron | 40.0% | |
TGGAATTTGAAGAGAACCCT+TGG | + | chr3_4:7402504-7402523 | None:intergenic | 40.0% | |
AGCTTCTCAACTAATGGGAT+TGG | + | chr3_4:7402524-7402543 | None:intergenic | 40.0% | |
GCTTGAAGCTTCTCAACTAA+TGG | + | chr3_4:7402530-7402549 | None:intergenic | 40.0% | |
TCGATCATCTCAACCTATCT+TGG | - | chr3_4:7402593-7402612 | Msa0488140:intron | 40.0% | |
CGATCATCTCAACCTATCTT+GGG | - | chr3_4:7402594-7402613 | Msa0488140:intron | 40.0% | |
TCTTGGGCTTGATTACATTG+TGG | - | chr3_4:7402610-7402629 | Msa0488140:intron | 40.0% | |
TTTCTCTTACTCATGGTGAC+AGG | - | chr3_4:7402728-7402747 | Msa0488140:intron | 40.0% | |
TTCTCTTACTCATGGTGACA+GGG | - | chr3_4:7402729-7402748 | Msa0488140:intron | 40.0% | |
TGAATGCTATCTGTCGCAAT+TGG | - | chr3_4:7402813-7402832 | Msa0488140:intron | 40.0% | |
CAACAATAGCAAAGCTCTTG+AGG | + | chr3_4:7402964-7402983 | None:intergenic | 40.0% | |
!! | CTCAAGAGCTTTGCTATTGT+TGG | - | chr3_4:7402962-7402981 | Msa0488140:intron | 40.0% |
AATGACTCCAATGAGTTGCT+TGG | + | chr3_4:7403016-7403035 | None:intergenic | 40.0% | |
GAATTAAGTGCAAGGCAGTA+TGG | + | chr3_4:7403088-7403107 | None:intergenic | 40.0% | |
! | AGGGACAAAATCACTTGTTG+CGG | + | chr3_4:7403146-7403165 | None:intergenic | 40.0% |
TAAACATAACAGGAAGGGGT+TGG | - | chr3_4:7403312-7403331 | Msa0488140:intron | 40.0% | |
!! | CATGGGGTATTGATACATTC+TGG | - | chr3_4:7403449-7403468 | Msa0488140:intron | 40.0% |
!! | ACATTCTGGAACCTTGTTAC+TGG | - | chr3_4:7403463-7403482 | Msa0488140:intron | 40.0% |
TTATGGTCGAACCAGTAACA+AGG | + | chr3_4:7403477-7403496 | None:intergenic | 40.0% | |
! | TGTTCTTTTCTACAGCCTTG+AGG | - | chr3_4:7403592-7403611 | Msa0488140:intron | 40.0% |
GGTTGAGGTAAATAGACACA+TGG | - | chr3_4:7403694-7403713 | Msa0488140:intron | 40.0% | |
ATGGCTATTGATCCTAAGCT+TGG | - | chr3_4:7400525-7400544 | Msa0488140:intron | 40.0% | |
TGGCTATTGATCCTAAGCTT+GGG | - | chr3_4:7400526-7400545 | Msa0488140:intron | 40.0% | |
AGGAAAATGAGGATCACTAG+TGG | - | chr3_4:7400561-7400580 | Msa0488140:intron | 40.0% | |
GGAAAATGAGGATCACTAGT+GGG | - | chr3_4:7400562-7400581 | Msa0488140:intron | 40.0% | |
!! | CTCTACTAGAGAGTACCAAA+GGG | + | chr3_4:7400621-7400640 | None:intergenic | 40.0% |
!! | ACTCTACTAGAGAGTACCAA+AGG | + | chr3_4:7400622-7400641 | None:intergenic | 40.0% |
TTGTGTTTGGACATCATGGA+AGG | + | chr3_4:7404018-7404037 | None:intergenic | 40.0% | |
TGTCTTGTGTTTGGACATCA+TGG | + | chr3_4:7404022-7404041 | None:intergenic | 40.0% | |
ATGATGTCCAAACACAAGAC+AGG | - | chr3_4:7404021-7404040 | Msa0488140:intron | 40.0% | |
! | TGATTTGCCTGTCTTGTGTT+TGG | + | chr3_4:7404031-7404050 | None:intergenic | 40.0% |
CTAAAGAAAAGTGAAGCTCG+AGG | + | chr3_4:7405008-7405027 | None:intergenic | 40.0% | |
!! | CTCGAGCTTCACTTTTCTTT+AGG | - | chr3_4:7405006-7405025 | Msa0488140:intron | 40.0% |
TCTACACACAAGTAGAGGAA+TGG | - | chr3_4:7405081-7405100 | Msa0488140:intron | 40.0% | |
TTACCTATTACCCACCAAAG+AGG | + | chr3_4:7405313-7405332 | None:intergenic | 40.0% | |
TACAATGAAGGAAGAGAAGG+AGG | + | chr3_4:7405647-7405666 | None:intergenic | 40.0% | |
TAACCCTAATGCATCGTCAA+GGG | + | chr3_4:7405767-7405786 | None:intergenic | 40.0% | |
TTAACCCTAATGCATCGTCA+AGG | + | chr3_4:7405768-7405787 | None:intergenic | 40.0% | |
AGGCTGAAAGAATTGATGCT+AGG | - | chr3_4:7405866-7405885 | Msa0488140:intron | 40.0% | |
GGCTGAAAGAATTGATGCTA+GGG | - | chr3_4:7405867-7405886 | Msa0488140:intron | 40.0% | |
GACGATGATGAAGAACAAGA+TGG | - | chr3_4:7406000-7406019 | Msa0488140:intron | 40.0% | |
AGATTTCCCCTAAACCTTGA+GGG | + | chr3_4:7406349-7406368 | None:intergenic | 40.0% | |
AAGATTTCCCCTAAACCTTG+AGG | + | chr3_4:7406350-7406369 | None:intergenic | 40.0% | |
CGAGATTCGATCACAAAGTT+TGG | + | chr3_4:7406456-7406475 | None:intergenic | 40.0% | |
CAATAGAAGAGGGAATCCAA+AGG | + | chr3_4:7407015-7407034 | None:intergenic | 40.0% | |
TTTCTTTCCACCTATTCGGA+AGG | - | chr3_4:7407159-7407178 | Msa0488140:intron | 40.0% | |
ATTGGCATGATCCCGAAAAT+GGG | - | chr3_4:7407295-7407314 | Msa0488140:intron | 40.0% | |
CCAAAACACCAGATATTTGC+AGG | + | chr3_4:7407432-7407451 | None:intergenic | 40.0% | |
! | CCTGCAAATATCTGGTGTTT+TGG | - | chr3_4:7407429-7407448 | Msa0488140:intron | 40.0% |
! | GGAGGTAGTATCTGACATTT+TGG | + | chr3_4:7407756-7407775 | None:intergenic | 40.0% |
AGACACTTAAAAAGGAACGG+AGG | - | chr3_4:7408012-7408031 | Msa0488140:intron | 40.0% | |
GACACTTAAAAAGGAACGGA+GGG | - | chr3_4:7408013-7408032 | Msa0488140:intron | 40.0% | |
GTCATTGTTGTGATACACAG+GGG | - | chr3_4:7408160-7408179 | Msa0488140:intron | 40.0% | |
GTCATCGAAATCTAGATCTC+TGG | + | chr3_4:7408246-7408265 | None:intergenic | 40.0% | |
TTTCTTGCGTGTGCAAGAAT+TGG | - | chr3_4:7408276-7408295 | Msa0488140:intron | 40.0% | |
CGAAGACCATCAATCAATTC+TGG | - | chr3_4:7408426-7408445 | Msa0488140:intron | 40.0% | |
!! | GCCTATTTTGGATGTTCTAG+CGG | - | chr3_4:7408455-7408474 | Msa0488140:intron | 40.0% |
TCCGCTAGAACATCCAAAAT+AGG | + | chr3_4:7408459-7408478 | None:intergenic | 40.0% | |
TGCCAAAAGCAAGTAAGACA+TGG | + | chr3_4:7408595-7408614 | None:intergenic | 40.0% | |
!! | GTCTTACTTGCTTTTGGCAA+AGG | - | chr3_4:7408596-7408615 | Msa0488140:intron | 40.0% |
GTCGCTTCATGTAAAAGTTC+TGG | - | chr3_4:7408638-7408657 | Msa0488140:intron | 40.0% | |
ATCAGTCTCGAAATTTGGGT+TGG | - | chr3_4:7408675-7408694 | Msa0488140:intron | 40.0% | |
! | TCAGTCTCGAAATTTGGGTT+GGG | - | chr3_4:7408676-7408695 | Msa0488140:intron | 40.0% |
ACAAAGTCAACAACCTTCCA+TGG | + | chr3_4:7408725-7408744 | None:intergenic | 40.0% | |
CATCACAGCAAACTAACCTT+AGG | + | chr3_4:7408871-7408890 | None:intergenic | 40.0% | |
!! | CTAAGGTTAGTTTGCTGTGA+TGG | - | chr3_4:7408869-7408888 | Msa0488140:intron | 40.0% |
!!! | CTGTGATGGACAACTTTTAG+TGG | - | chr3_4:7408883-7408902 | Msa0488140:intron | 40.0% |
!!! | TGCCTTATTTTATGCTTCGG+GGG | - | chr3_4:7408994-7409013 | Msa0488140:intron | 40.0% |
TTCCCCCGAAGCATAAAATA+AGG | + | chr3_4:7408999-7409018 | None:intergenic | 40.0% | |
TAGACATCAACGATATGAGG+TGG | - | chr3_4:7409204-7409223 | Msa0488140:intron | 40.0% | |
! | AACCACTGTACCATCTTTTG+TGG | - | chr3_4:7409422-7409441 | Msa0488140:intron | 40.0% |
AACCACAAAAGATGGTACAG+TGG | + | chr3_4:7409427-7409446 | None:intergenic | 40.0% | |
ACTCAGTTAGGCTAACTGTA+GGG | + | chr3_4:7409833-7409852 | None:intergenic | 40.0% | |
AACTCAGTTAGGCTAACTGT+AGG | + | chr3_4:7409834-7409853 | None:intergenic | 40.0% | |
! | ACAGTTAGCCTAACTGAGTT+AGG | - | chr3_4:7409834-7409853 | Msa0488140:intron | 40.0% |
!!! | AGGTGCAGTCATGTGTTTTT+TGG | - | chr3_4:7409854-7409873 | Msa0488140:intron | 40.0% |
GAGTAAACTTCAGGAACTGT+AGG | - | chr3_4:7409933-7409952 | Msa0488140:intron | 40.0% | |
!! | TTCTCAATGGGTGATGGATT+AGG | - | chr3_4:7410097-7410116 | Msa0488140:intron | 40.0% |
!! | TCTCAATGGGTGATGGATTA+GGG | - | chr3_4:7410098-7410117 | Msa0488140:intron | 40.0% |
!! | TGGATTTTGGAGGGTTTAGT+GGG | + | chr3_4:7410294-7410313 | None:intergenic | 40.0% |
!! | TTGGATTTTGGAGGGTTTAG+TGG | + | chr3_4:7410295-7410314 | None:intergenic | 40.0% |
CTTCCACTTCAAATTGACAC+CGG | - | chr3_4:7410767-7410786 | Msa0488140:CDS | 40.0% | |
! | TAACCGGTGTCAATTTGAAG+TGG | + | chr3_4:7410773-7410792 | None:intergenic | 40.0% |
GTGGATAATGCTACTATGGC+AGG | - | chr3_4:7397708-7397727 | Msa0488140:intron | 45.0% | |
AATTTCTCAGGCCAAACCCT+AGG | + | chr3_4:7397927-7397946 | None:intergenic | 45.0% | |
AATATCTGCAGGAATACCCG+AGG | - | chr3_4:7398061-7398080 | Msa0488140:intron | 45.0% | |
ATTTCCTGCTGATCATGTGG+TGG | - | chr3_4:7398115-7398134 | Msa0488140:intron | 45.0% | |
GTGGTGGCAGAAAAATCCTA+AGG | - | chr3_4:7398131-7398150 | Msa0488140:intron | 45.0% | |
!! | GGTAACTACCACTTTTCCTG+CGG | - | chr3_4:7398152-7398171 | Msa0488140:intron | 45.0% |
ATGTCCGTATGTAAATCCGC+AGG | + | chr3_4:7398171-7398190 | None:intergenic | 45.0% | |
! | GGTCTTCCGTGATTTTCTTG+CGG | - | chr3_4:7398269-7398288 | Msa0488140:CDS | 45.0% |
CCTATGGGGAAAAACTGATC+CGG | - | chr3_4:7398936-7398955 | Msa0488140:CDS | 45.0% | |
! | CTGATGCAGGTGCAATGTTT+TGG | - | chr3_4:7399925-7399944 | Msa0488140:intron | 45.0% |
!!! | GCAATGTTTTGGCTTACCCA+TGG | - | chr3_4:7399936-7399955 | Msa0488140:intron | 45.0% |
TGCCTTGCACAAGTTATGCT+AGG | - | chr3_4:7400265-7400284 | Msa0488140:intron | 45.0% | |
AAGTATCTCCTCTCTCCCTT+TGG | - | chr3_4:7400603-7400622 | Msa0488140:intron | 45.0% | |
CATACCAGAGACGCAAAAGA+TGG | - | chr3_4:7400903-7400922 | Msa0488140:intron | 45.0% | |
TACCAGAGACGCAAAAGATG+GGG | - | chr3_4:7400905-7400924 | Msa0488140:intron | 45.0% | |
ACGCCACCTATGGATGAATT+GGG | - | chr3_4:7400984-7401003 | Msa0488140:intron | 45.0% | |
CATCCCAATTCATCCATAGG+TGG | + | chr3_4:7400990-7401009 | None:intergenic | 45.0% | |
GGTAAAATGACACGCCATTC+AGG | + | chr3_4:7401045-7401064 | None:intergenic | 45.0% | |
CGATCTCAGCAAATGTGCTT+TGG | - | chr3_4:7401158-7401177 | Msa0488140:intron | 45.0% | |
TGATCAGGTACAAGCTCAGT+TGG | - | chr3_4:7401215-7401234 | Msa0488140:intron | 45.0% | |
TCTGGGAACGACTCAACAAT+GGG | + | chr3_4:7401270-7401289 | None:intergenic | 45.0% | |
! | TTCTGGGAACGACTCAACAA+TGG | + | chr3_4:7401271-7401290 | None:intergenic | 45.0% |
CCAGTTGCTCTTCATCTTCT+GGG | + | chr3_4:7401287-7401306 | None:intergenic | 45.0% | |
TCCAGTTGCTCTTCATCTTC+TGG | + | chr3_4:7401288-7401307 | None:intergenic | 45.0% | |
CAATCTCAACCATTAGCGCA+AGG | - | chr3_4:7401312-7401331 | Msa0488140:CDS | 45.0% | |
ATACTACCACCTTGCGCTAA+TGG | + | chr3_4:7401324-7401343 | None:intergenic | 45.0% | |
! | GAAGGAACCATGTGTTGTTG+CGG | + | chr3_4:7401492-7401511 | None:intergenic | 45.0% |
ATGGTTCCTTCGTTTGATCC+TGG | - | chr3_4:7401501-7401520 | Msa0488140:CDS | 45.0% | |
TTTCCTCCAGGATCAAACGA+AGG | + | chr3_4:7401510-7401529 | None:intergenic | 45.0% | |
TGAATGCCGAAATTTCCTCC+AGG | + | chr3_4:7401522-7401541 | None:intergenic | 45.0% | |
CAGTTTCGATACGGAGGTTT+GGG | + | chr3_4:7401579-7401598 | None:intergenic | 45.0% | |
GAAATTCCACGGGAATCTTG+TGG | + | chr3_4:7401602-7401621 | None:intergenic | 45.0% | |
ACCGTTATATTTCCGGTGTC+CGG | + | chr3_4:7401669-7401688 | None:intergenic | 45.0% | |
CATCACAACGATGTCGGTAT+CGG | - | chr3_4:7401695-7401714 | Msa0488140:intron | 45.0% | |
ATCACAACGATGTCGGTATC+GGG | - | chr3_4:7401696-7401715 | Msa0488140:intron | 45.0% | |
GAAATACCCCTCAGTGAGAT+TGG | - | chr3_4:7401738-7401757 | Msa0488140:intron | 45.0% | |
CAATTGAATGCCTCCACATC+AGG | - | chr3_4:7401931-7401950 | Msa0488140:intron | 45.0% | |
TGAATAAGGTCCTGATGTGG+AGG | + | chr3_4:7401944-7401963 | None:intergenic | 45.0% | |
TGGTGAATAAGGTCCTGATG+TGG | + | chr3_4:7401947-7401966 | None:intergenic | 45.0% | |
!! | CACGTAGCAGTTGGTGAATA+AGG | + | chr3_4:7401958-7401977 | None:intergenic | 45.0% |
GTTCTTGCTGCTGCAATACA+TGG | - | chr3_4:7402230-7402249 | Msa0488140:intron | 45.0% | |
GCAGATCCATAACCACAAAG+AGG | + | chr3_4:7402364-7402383 | None:intergenic | 45.0% | |
!! | GCTGCACAAGTATTGATGTC+CGG | + | chr3_4:7402679-7402698 | None:intergenic | 45.0% |
ACCACTTTATGACAGAGGTG+CGG | + | chr3_4:7402788-7402807 | None:intergenic | 45.0% | |
GCAATGTAGTTGGCATCTTC+AGG | - | chr3_4:7402849-7402868 | Msa0488140:intron | 45.0% | |
TGTTGGTCCAAGCAACTCAT+TGG | - | chr3_4:7403006-7403025 | Msa0488140:intron | 45.0% | |
CTGCCTTGCACTTAATTCTC+TGG | - | chr3_4:7403090-7403109 | Msa0488140:intron | 45.0% | |
TGGCCAGAGAATTAAGTGCA+AGG | + | chr3_4:7403096-7403115 | None:intergenic | 45.0% | |
! | GCAACAAGTGATTTTGTCCC+TGG | - | chr3_4:7403145-7403164 | Msa0488140:intron | 45.0% |
TCATTCAAACAGTGGGATCC+AGG | - | chr3_4:7403556-7403575 | Msa0488140:intron | 45.0% | |
! | GAACATTTTCCAACTGGTCC+TGG | + | chr3_4:7403577-7403596 | None:intergenic | 45.0% |
TTTCTACAGCCTTGAGGACA+AGG | - | chr3_4:7403598-7403617 | Msa0488140:intron | 45.0% | |
AAGTATCTCCTCTCTCCCTT+TGG | - | chr3_4:7400603-7400622 | Msa0488140:intron | 45.0% | |
! | CCATACACTCACGCTTTTAG+AGG | + | chr3_4:7404343-7404362 | None:intergenic | 45.0% |
! | CCTCTAAAAGCGTGAGTGTA+TGG | - | chr3_4:7404340-7404359 | Msa0488140:intron | 45.0% |
AAGAAAAGTGAAGCTCGAGG+AGG | + | chr3_4:7405005-7405024 | None:intergenic | 45.0% | |
TGATGTCAATGACTGTTGGC+TGG | - | chr3_4:7405250-7405269 | Msa0488140:intron | 45.0% | |
TGACGCAACGAACAACATTG+TGG | + | chr3_4:7405287-7405306 | None:intergenic | 45.0% | |
! | TGACCTCTTTGGTGGGTAAT+AGG | - | chr3_4:7405307-7405326 | Msa0488140:intron | 45.0% |
! | AGTTTAGGTGAGTTGAGCTC+CGG | + | chr3_4:7405377-7405396 | None:intergenic | 45.0% |
TCTCCCTTGACGATGCATTA+GGG | - | chr3_4:7405761-7405780 | Msa0488140:intron | 45.0% | |
AGAGTGTACGAGTTGTTGGA+CGG | - | chr3_4:7405901-7405920 | Msa0488140:intron | 45.0% | |
TCATCGTCATCACGATCCAA+TGG | + | chr3_4:7405988-7406007 | None:intergenic | 45.0% | |
AATCACACCTTCAGTTCAGC+TGG | - | chr3_4:7406065-7406084 | Msa0488140:intron | 45.0% | |
CTTCTTACCTTCCGAATAGG+TGG | + | chr3_4:7407169-7407188 | None:intergenic | 45.0% | |
CGTCTTCTTACCTTCCGAAT+AGG | + | chr3_4:7407172-7407191 | None:intergenic | 45.0% | |
CATTGGCATGATCCCGAAAA+TGG | - | chr3_4:7407294-7407313 | Msa0488140:intron | 45.0% | |
TTGCGTGTGCAAGAATTGGA+GGG | - | chr3_4:7408280-7408299 | Msa0488140:intron | 45.0% | |
!! | ACTTGCTTTTGGCAAAGGCT+CGG | - | chr3_4:7408601-7408620 | Msa0488140:intron | 45.0% |
AACAGTGGGAAATCCATGGA+AGG | - | chr3_4:7408709-7408728 | Msa0488140:intron | 45.0% | |
CAAGTCGAGTACACCTATGA+TGG | + | chr3_4:7408786-7408805 | None:intergenic | 45.0% | |
AGTGGTTCATATTGAGTCCG+AGG | - | chr3_4:7408901-7408920 | Msa0488140:intron | 45.0% | |
TCTATGCATTGAGCAACCTG+AGG | - | chr3_4:7409023-7409042 | Msa0488140:intron | 45.0% | |
TAGAACTGGAGTTCCTCCAA+AGG | - | chr3_4:7409153-7409172 | Msa0488140:intron | 45.0% | |
AAGTAGGCATTCTCCTTTGG+AGG | + | chr3_4:7409169-7409188 | None:intergenic | 45.0% | |
AGCAAGTAGGCATTCTCCTT+TGG | + | chr3_4:7409172-7409191 | None:intergenic | 45.0% | |
AAAGGAGAATGCCTACTTGC+TGG | - | chr3_4:7409171-7409190 | Msa0488140:intron | 45.0% | |
! | AGAATGCCTACTTGCTGGAT+TGG | - | chr3_4:7409176-7409195 | Msa0488140:intron | 45.0% |
! | AAAGCACCAATCCAGCAAGT+AGG | + | chr3_4:7409185-7409204 | None:intergenic | 45.0% |
TGACTGCACCTAACTCAGTT+AGG | + | chr3_4:7409845-7409864 | None:intergenic | 45.0% | |
! | ACGTAAGAGCGTGAGAAGTT+TGG | + | chr3_4:7409979-7409998 | None:intergenic | 45.0% |
CACATGGAGAGAAACAAAGG+AGG | + | chr3_4:7410007-7410026 | None:intergenic | 45.0% | |
GGTCACATGGAGAGAAACAA+AGG | + | chr3_4:7410010-7410029 | None:intergenic | 45.0% | |
! | AAATGAAGCACCTGTAGCGT+CGG | + | chr3_4:7410031-7410050 | None:intergenic | 45.0% |
!! | GGATTTTGGAGGGTTTAGTG+GGG | + | chr3_4:7410293-7410312 | None:intergenic | 45.0% |
GTTAAGGATTTCTTGGCTGC+TGG | - | chr3_4:7410633-7410652 | Msa0488140:CDS | 45.0% | |
!! | CAAAAAAAAAAAAAATAATT+TGG | + | chr3_4:7398604-7398623 | None:intergenic | 5.0% |
!!! | CAAATTATTTTTTTTTTTTT+TGG | - | chr3_4:7398602-7398621 | Msa0488140:CDS | 5.0% |
!!! | AAATAAAAAAACATATATTT+TGG | - | chr3_4:7408097-7408116 | Msa0488140:intron | 5.0% |
ATTATTGTCACCGCGCTCCT+AGG | - | chr3_4:7397907-7397926 | Msa0488140:intron | 50.0% | |
TTATTGTCACCGCGCTCCTA+GGG | - | chr3_4:7397908-7397927 | Msa0488140:intron | 50.0% | |
! | CCGGATCAGTTTTTCCCCAT+AGG | + | chr3_4:7398939-7398958 | None:intergenic | 50.0% |
GCAAGCTTGAAGGACCTTTG+AGG | - | chr3_4:7399626-7399645 | Msa0488140:intron | 50.0% | |
TCATTGCTCATGGCTGATGC+AGG | - | chr3_4:7399912-7399931 | Msa0488140:intron | 50.0% | |
GGTTGAGGTAAATGGACGCA+TGG | - | chr3_4:7400506-7400525 | Msa0488140:intron | 50.0% | |
!! | AGAGAGTACCAAAGGGAGAG+AGG | + | chr3_4:7400614-7400633 | None:intergenic | 50.0% |
ACCAGAGACGCAAAAGATGG+GGG | - | chr3_4:7400906-7400925 | Msa0488140:intron | 50.0% | |
ATAGGTGGCGTGGATACCAT+CGG | + | chr3_4:7400975-7400994 | None:intergenic | 50.0% | |
CAATTCATCCATAGGTGGCG+TGG | + | chr3_4:7400985-7401004 | None:intergenic | 50.0% | |
CACGCCACCTATGGATGAAT+TGG | - | chr3_4:7400983-7401002 | Msa0488140:intron | 50.0% | |
!!! | GCGTGTCATTTTACCGGTAC+CGG | - | chr3_4:7401050-7401069 | Msa0488140:intron | 50.0% |
GATGTCGCCAAGTGTATCTG+TGG | - | chr3_4:7401110-7401129 | Msa0488140:intron | 50.0% | |
TCCACAGCCACAGATACACT+TGG | + | chr3_4:7401120-7401139 | None:intergenic | 50.0% | |
TCAGGTACAAGCTCAGTTGG+TGG | - | chr3_4:7401218-7401237 | Msa0488140:intron | 50.0% | |
CCCAGAAGATGAAGAGCAAC+TGG | - | chr3_4:7401284-7401303 | Msa0488140:intron | 50.0% | |
TCTCAACCATTAGCGCAAGG+TGG | - | chr3_4:7401315-7401334 | Msa0488140:CDS | 50.0% | |
GACCTTTGCTTCAGCACTTG+CGG | - | chr3_4:7401422-7401441 | Msa0488140:CDS | 50.0% | |
!! | TACCGCAAGTGCTGAAGCAA+AGG | + | chr3_4:7401427-7401446 | None:intergenic | 50.0% |
ACGGTCGTCTTCATCGACAA+TGG | + | chr3_4:7401450-7401469 | None:intergenic | 50.0% | |
! | CATGTGTTGTTGCGGTGTTG+TGG | + | chr3_4:7401484-7401503 | None:intergenic | 50.0% |
CACAACACCGCAACAACACA+TGG | - | chr3_4:7401482-7401501 | Msa0488140:CDS | 50.0% | |
GTTCCTTCGTTTGATCCTGG+AGG | - | chr3_4:7401504-7401523 | Msa0488140:CDS | 50.0% | |
TTTCGATACGGAGGTTTGGG+TGG | + | chr3_4:7401576-7401595 | None:intergenic | 50.0% | |
GCAGTTTCGATACGGAGGTT+TGG | + | chr3_4:7401580-7401599 | None:intergenic | 50.0% | |
TTGTGGCAGTTTCGATACGG+AGG | + | chr3_4:7401585-7401604 | None:intergenic | 50.0% | |
AAACTGCCACAAGATTCCCG+TGG | - | chr3_4:7401593-7401612 | Msa0488140:CDS | 50.0% | |
GTTATATTTCCGGTGTCCGG+CGG | + | chr3_4:7401666-7401685 | None:intergenic | 50.0% | |
GCCGGACACCGGAAATATAA+CGG | - | chr3_4:7401665-7401684 | Msa0488140:intron | 50.0% | |
! | GCCTCGTTTTCACATGCCAA+GGG | - | chr3_4:7402485-7402504 | Msa0488140:intron | 50.0% |
ACCCTTGGCATGTGAAAACG+AGG | + | chr3_4:7402489-7402508 | None:intergenic | 50.0% | |
ACAACTTCGTCAGGTGGTTC+CGG | + | chr3_4:7402653-7402672 | None:intergenic | 50.0% | |
CACCTGACGAAGTTGTCATC+CGG | - | chr3_4:7402657-7402676 | Msa0488140:intron | 50.0% | |
GGTGACAGGGAACATTACTG+CGG | - | chr3_4:7402742-7402761 | Msa0488140:intron | 50.0% | |
! | CACTTTATGACAGAGGTGCG+GGG | + | chr3_4:7402786-7402805 | None:intergenic | 50.0% |
! | CCACTTTATGACAGAGGTGC+GGG | + | chr3_4:7402787-7402806 | None:intergenic | 50.0% |
TGGTGTAGAGCATGCTGTCA+TGG | - | chr3_4:7402982-7403001 | Msa0488140:intron | 50.0% | |
GGTGTAGAGCATGCTGTCAT+GGG | - | chr3_4:7402983-7403002 | Msa0488140:intron | 50.0% | |
!! | AGAGAGTACCAAAGGGAGAG+AGG | + | chr3_4:7400614-7400633 | None:intergenic | 50.0% |
GCTAGGAATTGTGGACCACA+TGG | - | chr3_4:7405165-7405184 | Msa0488140:intron | 50.0% | |
TCGTTGCGTCATGACCTCTT+TGG | - | chr3_4:7405296-7405315 | Msa0488140:intron | 50.0% | |
TTGCGTCATGACCTCTTTGG+TGG | - | chr3_4:7405299-7405318 | Msa0488140:intron | 50.0% | |
TGCGTCATGACCTCTTTGGT+GGG | - | chr3_4:7405300-7405319 | Msa0488140:intron | 50.0% | |
! | TTTAGGTGAGTTGAGCTCCG+GGG | + | chr3_4:7405375-7405394 | None:intergenic | 50.0% |
! | GTTTAGGTGAGTTGAGCTCC+GGG | + | chr3_4:7405376-7405395 | None:intergenic | 50.0% |
!! | GGCCTATAGATTTGTTGGGC+CGG | - | chr3_4:7405540-7405559 | Msa0488140:intron | 50.0% |
AGCCGGCCCAACAAATCTAT+AGG | + | chr3_4:7405545-7405564 | None:intergenic | 50.0% | |
!! | ATAGATTTGTTGGGCCGGCT+CGG | - | chr3_4:7405545-7405564 | Msa0488140:intron | 50.0% |
GGAGCATACCGTTGTATCTG+CGG | + | chr3_4:7405626-7405645 | None:intergenic | 50.0% | |
CTCTCCCTTGACGATGCATT+AGG | - | chr3_4:7405760-7405779 | Msa0488140:intron | 50.0% | |
!! | TAAGTTGGTAGGGTCCCTCA+AGG | - | chr3_4:7406332-7406351 | Msa0488140:intron | 50.0% |
GTAGGGTCCCTCAAGGTTTA+GGG | - | chr3_4:7406339-7406358 | Msa0488140:intron | 50.0% | |
TAGGGTCCCTCAAGGTTTAG+GGG | - | chr3_4:7406340-7406359 | Msa0488140:intron | 50.0% | |
! | GGATGAGAAGTGTGCTGAGT+TGG | + | chr3_4:7407042-7407061 | None:intergenic | 50.0% |
!! | GAACGGAGGGAGTATTTGCA+GGG | - | chr3_4:7408026-7408045 | Msa0488140:intron | 50.0% |
!! | AACGGAGGGAGTATTTGCAG+GGG | - | chr3_4:7408027-7408046 | Msa0488140:intron | 50.0% |
CTTGCGTGTGCAAGAATTGG+AGG | - | chr3_4:7408279-7408298 | Msa0488140:intron | 50.0% | |
TCGGTCAGCTATGCTGATGA+AGG | + | chr3_4:7408393-7408412 | None:intergenic | 50.0% | |
TACACCTATGATGGCCTCGT+TGG | + | chr3_4:7408777-7408796 | None:intergenic | 50.0% | |
ATGCATTGAGCAACCTGAGG+AGG | - | chr3_4:7409026-7409045 | Msa0488140:intron | 50.0% | |
ATTGAGCAACCTGAGGAGGT+GGG | - | chr3_4:7409030-7409049 | Msa0488140:intron | 50.0% | |
TTTCAAAACCCCACCTCCTC+AGG | + | chr3_4:7409042-7409061 | None:intergenic | 50.0% | |
GCAGTGTTGTACAAGCTCTG+AGG | + | chr3_4:7409774-7409793 | None:intergenic | 50.0% | |
TAGTGGGGAAGGTCTTTGGA+GGG | + | chr3_4:7410278-7410297 | None:intergenic | 50.0% | |
TTAGTGGGGAAGGTCTTTGG+AGG | + | chr3_4:7410279-7410298 | None:intergenic | 50.0% | |
GGTTTAGTGGGGAAGGTCTT+TGG | + | chr3_4:7410282-7410301 | None:intergenic | 50.0% | |
TTTGGAGGGTTTAGTGGGGA+AGG | + | chr3_4:7410289-7410308 | None:intergenic | 50.0% | |
TCTGCCACCACATGATCAGC+AGG | + | chr3_4:7398122-7398141 | None:intergenic | 55.0% | |
CAAGCTTGCACTCTCTCCCA+TGG | + | chr3_4:7399615-7399634 | None:intergenic | 55.0% | |
! | GGGAGAGAGTGCAAGCTTGA+AGG | - | chr3_4:7399616-7399635 | Msa0488140:intron | 55.0% |
! | ACCCCCATCTTTTGCGTCTC+TGG | + | chr3_4:7400910-7400929 | None:intergenic | 55.0% |
AGAGACGCAAAAGATGGGGG+TGG | - | chr3_4:7400909-7400928 | Msa0488140:intron | 55.0% | |
GTGGCCGCAAATGCGATGAA+AGG | - | chr3_4:7400928-7400947 | Msa0488140:intron | 55.0% | |
GGGGCCTTTCATCGCATTTG+CGG | + | chr3_4:7400935-7400954 | None:intergenic | 55.0% | |
GATGGTATCCACGCCACCTA+TGG | - | chr3_4:7400974-7400993 | Msa0488140:intron | 55.0% | |
GCCAAGTGTATCTGTGGCTG+TGG | - | chr3_4:7401116-7401135 | Msa0488140:intron | 55.0% | |
! | TTCAAGAAGTGGTGGGGGCA+TGG | + | chr3_4:7401643-7401662 | None:intergenic | 55.0% |
! | GGCCTCGTTTTCACATGCCA+AGG | - | chr3_4:7402484-7402503 | Msa0488140:intron | 55.0% |
CGGATGACAACTTCGTCAGG+TGG | + | chr3_4:7402659-7402678 | None:intergenic | 55.0% | |
GTCCGGATGACAACTTCGTC+AGG | + | chr3_4:7402662-7402681 | None:intergenic | 55.0% | |
CCCGCACCTCTGTCATAAAG+TGG | - | chr3_4:7402784-7402803 | Msa0488140:intron | 55.0% | |
GAGCATGCTGTCATGGGTGT+TGG | - | chr3_4:7402989-7403008 | Msa0488140:intron | 55.0% | |
CTCTGTCGCCGCAGATACAA+CGG | - | chr3_4:7405615-7405634 | Msa0488140:intron | 55.0% | |
CCAGTGTCCAGCTGAACTGA+AGG | + | chr3_4:7406075-7406094 | None:intergenic | 55.0% | |
CCTTCAGTTCAGCTGGACAC+TGG | - | chr3_4:7406072-7406091 | Msa0488140:intron | 55.0% | |
GGTAGGGTCCCTCAAGGTTT+AGG | - | chr3_4:7406338-7406357 | Msa0488140:intron | 55.0% | |
!! | GGAACGGAGGGAGTATTTGC+AGG | - | chr3_4:7408025-7408044 | Msa0488140:intron | 55.0% |
! | TGCTTTTGGCAAAGGCTCGG+AGG | - | chr3_4:7408604-7408623 | Msa0488140:intron | 55.0% |
GTCACCAACGAGGCCATCAT+AGG | - | chr3_4:7408770-7408789 | Msa0488140:intron | 55.0% | |
CATTGAGCAACCTGAGGAGG+TGG | - | chr3_4:7409029-7409048 | Msa0488140:intron | 55.0% | |
TTGAGCAACCTGAGGAGGTG+GGG | - | chr3_4:7409031-7409050 | Msa0488140:intron | 55.0% | |
CCATGGTCGCTCTCCCTTTC+CGG | + | chr3_4:7399598-7399617 | None:intergenic | 60.0% | |
CGGAAAGGGAGAGCGACCAT+GGG | - | chr3_4:7399596-7399615 | Msa0488140:intron | 60.0% | |
TGAAAGGCCCCGCTCTCACT+TGG | - | chr3_4:7400944-7400963 | Msa0488140:intron | 60.0% | |
TCGGAGCCACCAAGTGAGAG+CGG | + | chr3_4:7400956-7400975 | None:intergenic | 60.0% | |
! | CTCTCACTTGGTGGCTCCGA+TGG | - | chr3_4:7400956-7400975 | Msa0488140:intron | 60.0% |
TCCTCTTCGTCGTCCGGTAC+CGG | + | chr3_4:7401066-7401085 | None:intergenic | 60.0% | |
! | GGGTGGTGGCGTGAACTCTT+TGG | + | chr3_4:7401559-7401578 | None:intergenic | 60.0% |
CGATACGGAGGTTTGGGTGG+TGG | + | chr3_4:7401573-7401592 | None:intergenic | 60.0% | |
GGCGGTTCAAGAAGTGGTGG+GGG | + | chr3_4:7401648-7401667 | None:intergenic | 60.0% | |
CGGCGGTTCAAGAAGTGGTG+GGG | + | chr3_4:7401649-7401668 | None:intergenic | 60.0% | |
CCGGCGGTTCAAGAAGTGGT+GGG | + | chr3_4:7401650-7401669 | None:intergenic | 60.0% | |
CCCACCACTTCTTGAACCGC+CGG | - | chr3_4:7401647-7401666 | Msa0488140:intron | 60.0% | |
TCCGGCGGTTCAAGAAGTGG+TGG | + | chr3_4:7401651-7401670 | None:intergenic | 60.0% | |
GTGTCCGGCGGTTCAAGAAG+TGG | + | chr3_4:7401654-7401673 | None:intergenic | 60.0% | |
CTTCTTGAACCGCCGGACAC+CGG | - | chr3_4:7401654-7401673 | Msa0488140:intron | 60.0% | |
GGCAAATACTCCACCGCCAC+CGG | - | chr3_4:7402631-7402650 | Msa0488140:intron | 60.0% | |
ACTTCGTCAGGTGGTTCCGG+TGG | + | chr3_4:7402650-7402669 | None:intergenic | 60.0% | |
! | TGACAGAGGTGCGGGGTCAT+CGG | + | chr3_4:7402779-7402798 | None:intergenic | 60.0% |
CAGTGGGATCCAGGACCAGT+TGG | - | chr3_4:7403565-7403584 | Msa0488140:intron | 60.0% | |
TGAACCTTGCCGATGTGCCC+CGG | - | chr3_4:7405355-7405374 | Msa0488140:intron | 60.0% | |
AGTTGAGCTCCGGGGCACAT+CGG | + | chr3_4:7405367-7405386 | None:intergenic | 60.0% | |
AGTCGGGTTCATCACCGAGC+CGG | + | chr3_4:7405562-7405581 | None:intergenic | 60.0% | |
CGGCGACAGAGCTGAAGTGA+GGG | + | chr3_4:7405606-7405625 | None:intergenic | 60.0% | |
CTCCATGTGACCGACGCTAC+AGG | - | chr3_4:7410018-7410037 | Msa0488140:intron | 60.0% | |
!! | CACCTGTAGCGTCGGTCACA+TGG | + | chr3_4:7410023-7410042 | None:intergenic | 60.0% |
GTCACCGCGCTCCTAGGGTT+TGG | - | chr3_4:7397913-7397932 | Msa0488140:intron | 65.0% | |
CAGGCCAAACCCTAGGAGCG+CGG | + | chr3_4:7397920-7397939 | None:intergenic | 65.0% | |
CCGGAAAGGGAGAGCGACCA+TGG | - | chr3_4:7399595-7399614 | Msa0488140:intron | 65.0% | |
AAGGCCCCGCTCTCACTTGG+TGG | - | chr3_4:7400947-7400966 | Msa0488140:intron | 65.0% | |
GGAGCCACCAAGTGAGAGCG+GGG | + | chr3_4:7400954-7400973 | None:intergenic | 65.0% | |
CGGAGCCACCAAGTGAGAGC+GGG | + | chr3_4:7400955-7400974 | None:intergenic | 65.0% | |
! | ACCGGTACCGGACGACGAAG+AGG | - | chr3_4:7401062-7401081 | Msa0488140:intron | 65.0% |
! | GGTACCGGACGACGAAGAGG+AGG | - | chr3_4:7401065-7401084 | Msa0488140:intron | 65.0% |
ACCGGACGACGAAGAGGAGG+CGG | - | chr3_4:7401068-7401087 | Msa0488140:intron | 65.0% | |
GACGAAGAGGAGGCGGGTCA+TGG | - | chr3_4:7401075-7401094 | Msa0488140:intron | 65.0% | |
TCGTCAGGTGGTTCCGGTGG+CGG | + | chr3_4:7402647-7402666 | None:intergenic | 65.0% | |
GCGGCGACAGAGCTGAAGTG+AGG | + | chr3_4:7405607-7405626 | None:intergenic | 65.0% | |
CCCGCCTCCTCTTCGTCGTC+CGG | + | chr3_4:7401072-7401091 | None:intergenic | 70.0% | |
CCGGACGACGAAGAGGAGGC+GGG | - | chr3_4:7401069-7401088 | Msa0488140:intron | 70.0% | |
! | TCAGGTGGTTCCGGTGGCGG+TGG | + | chr3_4:7402644-7402663 | None:intergenic | 70.0% |
TGCGGGGTCATCGGAGGTGG+TGG | + | chr3_4:7402770-7402789 | None:intergenic | 70.0% | |
AGGTGCGGGGTCATCGGAGG+TGG | + | chr3_4:7402773-7402792 | None:intergenic | 70.0% | |
! | CAGAGGTGCGGGGTCATCGG+AGG | + | chr3_4:7402776-7402795 | None:intergenic | 70.0% |
AGCTCCGGGGCACATCGGCA+AGG | + | chr3_4:7405362-7405381 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_4 | gene | 7396530 | 7410859 | 7396530 | ID=Msa0488140;Name=Msa0488140 |
chr3_4 | mRNA | 7396530 | 7410859 | 7396530 | ID=Msa0488140-mRNA-1;Parent=Msa0488140;Name=Msa0488140-mRNA-1;_AED=0.33;_eAED=0.33;_QI=0|0|0|1|0.12|0.11|9|0|621 |
chr3_4 | exon | 7410626 | 7410859 | 7410626 | ID=Msa0488140-mRNA-1:exon:2619;Parent=Msa0488140-mRNA-1 |
chr3_4 | exon | 7401296 | 7401638 | 7401296 | ID=Msa0488140-mRNA-1:exon:2618;Parent=Msa0488140-mRNA-1 |
chr3_4 | exon | 7398974 | 7399209 | 7398974 | ID=Msa0488140-mRNA-1:exon:2617;Parent=Msa0488140-mRNA-1 |
chr3_4 | exon | 7398727 | 7398958 | 7398727 | ID=Msa0488140-mRNA-1:exon:2616;Parent=Msa0488140-mRNA-1 |
chr3_4 | exon | 7398446 | 7398675 | 7398446 | ID=Msa0488140-mRNA-1:exon:2615;Parent=Msa0488140-mRNA-1 |
chr3_4 | exon | 7398167 | 7398415 | 7398167 | ID=Msa0488140-mRNA-1:exon:2614;Parent=Msa0488140-mRNA-1 |
chr3_4 | exon | 7396721 | 7396933 | 7396721 | ID=Msa0488140-mRNA-1:exon:2613;Parent=Msa0488140-mRNA-1 |
chr3_4 | exon | 7396601 | 7396706 | 7396601 | ID=Msa0488140-mRNA-1:exon:2612;Parent=Msa0488140-mRNA-1 |
chr3_4 | exon | 7396530 | 7396552 | 7396530 | ID=Msa0488140-mRNA-1:exon:2611;Parent=Msa0488140-mRNA-1 |
chr3_4 | CDS | 7410626 | 7410859 | 7410626 | ID=Msa0488140-mRNA-1:cds;Parent=Msa0488140-mRNA-1 |
chr3_4 | CDS | 7401296 | 7401638 | 7401296 | ID=Msa0488140-mRNA-1:cds;Parent=Msa0488140-mRNA-1 |
chr3_4 | CDS | 7398974 | 7399209 | 7398974 | ID=Msa0488140-mRNA-1:cds;Parent=Msa0488140-mRNA-1 |
chr3_4 | CDS | 7398727 | 7398958 | 7398727 | ID=Msa0488140-mRNA-1:cds;Parent=Msa0488140-mRNA-1 |
chr3_4 | CDS | 7398446 | 7398675 | 7398446 | ID=Msa0488140-mRNA-1:cds;Parent=Msa0488140-mRNA-1 |
chr3_4 | CDS | 7398167 | 7398415 | 7398167 | ID=Msa0488140-mRNA-1:cds;Parent=Msa0488140-mRNA-1 |
chr3_4 | CDS | 7396721 | 7396933 | 7396721 | ID=Msa0488140-mRNA-1:cds;Parent=Msa0488140-mRNA-1 |
chr3_4 | CDS | 7396601 | 7396706 | 7396601 | ID=Msa0488140-mRNA-1:cds;Parent=Msa0488140-mRNA-1 |
chr3_4 | CDS | 7396530 | 7396552 | 7396530 | ID=Msa0488140-mRNA-1:cds;Parent=Msa0488140-mRNA-1 |
Gene Sequence |
Protein sequence |