AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0489150

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0489150 MtrunA17_Chr3g0079321 95.937 443 18 0 86 528 149 591 0.0 855
Msa0489150 MtrunA17_Chr3g0079321 90.000 90 9 0 1 90 1 90 6.26e-46 169
Msa0489150 MtrunA17_Chr4g0056511 66.895 438 145 0 87 524 148 585 0.0 625
Msa0489150 MtrunA17_Chr4g0056511 59.756 82 33 0 8 89 6 87 3.15e-13 72.4
Msa0489150 MtrunA17_Chr7g0234061 62.132 441 160 4 87 523 150 587 0.0 559
Msa0489150 MtrunA17_Chr7g0234061 63.235 68 25 0 22 89 22 89 3.99e-11 65.5
Msa0489150 MtrunA17_Chr3g0143671 49.132 403 184 7 88 489 152 534 1.87e-125 377
Msa0489150 MtrunA17_Chr1g0157341 40.476 546 241 10 8 489 8 533 2.09e-119 362
Msa0489150 MtrunA17_Chr4g0024861 39.962 533 235 11 22 489 19 531 1.99e-118 359
Msa0489150 MtrunA17_Chr4g0038671 47.395 403 190 7 88 489 152 533 8.13e-118 358
Msa0489150 MtrunA17_Chr5g0402831 47.277 404 190 6 86 489 151 531 6.31e-117 355
Msa0489150 MtrunA17_Chr8g0374271 43.578 436 213 8 56 489 130 534 2.89e-113 346
Msa0489150 MtrunA17_Chr2g0322441 46.410 390 188 6 101 489 165 534 5.09e-112 343
Msa0489150 MtrunA17_Chr4g0024641 44.337 415 210 6 82 495 66 460 3.71e-110 350
Msa0489150 MtrunA17_Chr4g0024641 43.662 71 40 0 425 495 514 584 8.60e-12 68.2
Msa0489150 MtrunA17_Chr4g0024641 43.662 71 40 0 425 495 576 646 8.60e-12 68.2
Msa0489150 MtrunA17_Chr4g0024641 43.662 71 40 0 425 495 638 708 8.60e-12 68.2
Msa0489150 MtrunA17_Chr4g0024641 43.662 71 40 0 425 495 700 770 8.60e-12 68.2
Msa0489150 MtrunA17_Chr4g0024641 43.662 71 40 0 425 495 824 894 8.60e-12 68.2
Msa0489150 MtrunA17_Chr4g0024641 46.154 65 35 0 425 489 886 950 1.52e-11 67.4
Msa0489150 MtrunA17_Chr4g0024641 45.455 66 36 0 430 495 457 522 2.21e-11 66.6
Msa0489150 MtrunA17_Chr4g0024641 42.254 71 41 0 425 495 762 832 9.60e-11 64.7
Msa0489150 MtrunA17_Chr4g0075071 44.924 394 196 6 97 489 162 535 7.98e-110 337
Msa0489150 MtrunA17_Chr4g0075071 40.964 83 49 0 7 89 9 91 8.80e-11 64.3
Msa0489150 MtrunA17_Chr8g0374261 43.826 413 204 7 88 496 151 539 1.96e-107 331
Msa0489150 MtrunA17_Chr8g0374261 51.786 56 27 0 34 89 34 89 5.55e-11 65.1
Msa0489150 MtrunA17_Chr4g0043251 41.278 407 219 8 87 489 148 538 3.95e-99 310
Msa0489150 MtrunA17_Chr4g0043251 48.837 86 40 1 4 89 6 87 2.92e-11 65.9
Msa0489150 MtrunA17_Chr1g0197301 46.246 333 171 6 159 489 4 330 1.81e-95 293
Msa0489150 MtrunA17_Chr3g0121151 40.196 408 222 9 87 489 187 577 2.32e-95 301
Msa0489150 MtrunA17_Chr4g0043261 39.853 409 218 9 87 489 146 532 2.02e-94 298
Msa0489150 MtrunA17_Chr3g0121161 39.706 408 224 9 87 489 187 577 1.07e-93 297
Msa0489150 MtrunA17_Chr3g0121171 40.686 408 220 9 87 489 147 537 2.40e-90 303
Msa0489150 MtrunA17_Chr3g0121171 39.951 408 223 9 87 489 722 1112 3.11e-89 300
Msa0489150 MtrunA17_Chr3g0121171 39.951 408 223 9 87 489 1297 1687 4.18e-88 296
Msa0489150 MtrunA17_Chr3g0121171 39.416 411 221 8 87 489 1863 2253 2.44e-87 295
Msa0489150 MtrunA17_Chr5g0404361 29.176 425 256 15 91 488 205 611 2.59e-34 137
Msa0489150 MtrunA17_Chr5g0404341 28.499 393 231 16 91 453 159 531 2.22e-30 125
Msa0489150 MtrunA17_Chr3g0118321 26.185 443 266 18 87 489 142 563 1.61e-29 122
Msa0489150 MtrunA17_Chr4g0075781 38.068 176 79 3 88 263 21 166 3.33e-29 113
Msa0489150 MtrunA17_Chr7g0237491 28.784 403 236 15 89 453 156 545 4.81e-29 121
Msa0489150 MtrunA17_Chr5g0429511 28.497 386 239 14 91 453 152 523 5.16e-29 120
Msa0489150 MtrunA17_Chr7g0238941 27.692 390 250 12 91 453 159 543 2.36e-28 119
Msa0489150 MtrunA17_Chr4g0005921 23.956 551 305 17 32 488 27 557 4.89e-28 117
Msa0489150 MtrunA17_Chr8g0346581 25.698 537 302 18 10 453 4 536 1.38e-27 116
Msa0489150 MtrunA17_Chr7g0238351 28.141 398 248 12 88 453 155 546 3.68e-27 115
Msa0489150 MtrunA17_Chr8g0382691 25.404 433 267 11 91 489 158 568 3.03e-26 112
Msa0489150 MtrunA17_Chr7g0237441 26.733 404 245 15 88 453 155 545 3.30e-26 112
Msa0489150 MtrunA17_Chr3g0104061 24.111 506 287 16 32 453 29 521 4.28e-26 112
Msa0489150 MtrunA17_Chr5g0436461 28.244 393 230 15 91 453 149 519 6.16e-26 111
Msa0489150 MtrunA17_Chr3g0118331 25.986 431 259 15 96 489 155 562 8.94e-25 108
Msa0489150 MtrunA17_Chr4g0031901 25.871 402 239 13 91 453 169 550 1.52e-24 107
Msa0489150 MtrunA17_Chr7g0238981 26.076 395 258 13 88 453 169 558 1.79e-23 104
Msa0489150 MtrunA17_Chr5g0431581 27.436 390 242 13 91 453 150 525 1.16e-20 95.5
Msa0489150 MtrunA17_Chr5g0437681 25.629 437 268 19 91 488 149 567 1.22e-19 92.4
Msa0489150 MtrunA17_Chr3g0114211 25.964 389 251 15 91 453 158 535 1.28e-19 92.4
Msa0489150 MtrunA17_Chr2g0278811 26.253 419 244 17 91 453 163 572 2.74e-19 91.3
Msa0489150 MtrunA17_Chr3g0118351 23.988 346 210 8 181 489 5 334 2.03e-18 86.7
Msa0489150 MtrunA17_Chr4g0024651 49.231 65 32 1 22 85 19 83 2.38e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0489150 AT4G25240.2 67.381 420 136 1 86 505 149 567 0.0 617
Msa0489150 AT4G25240.2 57.831 83 35 0 8 90 8 90 4.39e-17 84.7
Msa0489150 AT4G25240.1 67.381 420 136 1 86 505 149 567 0.0 617
Msa0489150 AT4G25240.1 57.831 83 35 0 8 90 8 90 4.39e-17 84.7
Msa0489150 AT5G51480.1 63.288 444 160 3 86 527 148 590 0.0 612
Msa0489150 AT5G51480.1 62.857 70 26 0 21 90 20 89 8.00e-19 90.1
Msa0489150 AT4G12420.1 65.796 421 144 0 87 507 146 566 0.0 596
Msa0489150 AT4G12420.1 57.303 89 34 1 1 89 1 85 8.56e-23 102
Msa0489150 AT4G12420.2 65.796 421 144 0 87 507 146 566 0.0 596
Msa0489150 AT4G12420.2 57.303 89 34 1 1 89 1 85 8.56e-23 102
Msa0489150 AT5G48450.2 56.696 448 174 7 87 528 150 583 7.14e-175 506
Msa0489150 AT5G48450.2 53.247 77 36 0 13 89 13 89 9.40e-16 80.5
Msa0489150 AT5G48450.1 57.079 445 170 7 87 523 150 581 4.74e-174 505
Msa0489150 AT5G48450.1 53.247 77 36 0 13 89 13 89 1.08e-15 80.5
Msa0489150 AT4G22010.1 47.772 404 189 7 88 489 148 531 1.96e-119 362
Msa0489150 AT1G21850.1 46.898 403 191 6 88 489 151 531 1.15e-117 358
Msa0489150 AT1G21850.1 44.304 79 44 0 11 89 11 89 1.06e-12 70.9
Msa0489150 AT1G76160.1 45.409 403 198 6 88 489 150 531 8.57e-116 353
Msa0489150 AT1G76160.1 42.045 88 49 1 2 89 3 88 2.55e-11 66.6
Msa0489150 AT1G41830.1 45.255 411 203 7 88 497 151 540 6.26e-113 346
Msa0489150 AT1G21860.1 44.059 404 203 6 87 489 150 531 8.09e-111 340
Msa0489150 AT1G21860.1 45.570 79 43 0 11 89 11 89 1.18e-13 73.9
Msa0489150 AT1G75790.1 42.482 419 209 8 86 492 147 545 2.44e-109 337
Msa0489150 AT4G38420.1 45.721 409 195 8 88 489 152 540 4.68e-109 336
Msa0489150 AT4G38420.1 38.272 81 49 1 10 90 12 91 2.82e-11 66.6
Msa0489150 AT3G13390.1 43.137 408 211 7 87 489 149 540 1.30e-108 335
Msa0489150 AT4G28090.1 45.074 406 199 10 88 489 150 535 2.66e-108 334
Msa0489150 AT1G55570.1 41.205 415 223 7 87 496 150 548 5.69e-106 328
Msa0489150 AT1G55560.1 37.431 545 254 13 15 489 10 537 1.90e-105 327
Msa0489150 AT5G66920.1 41.584 404 211 7 88 489 159 539 6.75e-103 320
Msa0489150 AT5G66920.1 57.143 49 21 0 41 89 49 97 5.35e-11 65.5
Msa0489150 AT3G13400.2 41.565 409 215 9 87 489 148 538 1.56e-101 317
Msa0489150 AT3G13400.1 41.565 409 215 9 87 489 148 538 1.56e-101 317
Msa0489150 AT4G37160.1 43.137 408 205 9 86 489 151 535 8.79e-99 309
Msa0489150 AT2G23630.2 41.707 410 217 7 87 495 156 544 2.16e-96 303
Msa0489150 AT2G23630.1 41.707 410 217 7 87 495 151 539 2.19e-96 303
Msa0489150 AT4G38420.3 44.857 350 166 8 88 430 152 481 7.11e-85 271
Msa0489150 AT4G38420.3 37.805 82 50 1 9 90 11 91 3.10e-11 66.2
Msa0489150 AT4G38420.2 43.034 323 157 8 88 403 152 454 9.65e-73 239
Msa0489150 AT4G38420.2 37.805 82 50 1 9 90 11 91 3.37e-11 65.9
Msa0489150 AT4G37160.2 40.312 320 168 8 86 403 151 449 1.55e-66 222
Msa0489150 AT4G39830.1 23.368 582 324 16 8 489 19 578 2.16e-37 145
Msa0489150 AT4G39830.4 24.764 424 268 10 101 489 63 470 6.85e-34 134
Msa0489150 AT4G39830.2 24.342 456 289 11 74 489 44 483 7.20e-34 134
Msa0489150 AT4G39830.3 24.342 456 289 11 74 489 42 481 1.24e-33 134
Msa0489150 AT5G21105.1 27.483 433 251 15 96 489 168 576 2.18e-31 128
Msa0489150 AT5G21105.3 28.718 390 220 14 96 446 168 538 3.30e-30 124
Msa0489150 AT5G21105.2 28.030 396 226 13 130 489 13 385 4.61e-30 122
Msa0489150 AT5G58910.2 25.185 540 300 20 5 453 6 532 5.46e-30 124
Msa0489150 AT5G58910.1 26.547 501 269 21 38 453 2 488 2.33e-29 122
Msa0489150 AT5G58910.3 26.036 507 271 20 38 453 38 531 5.52e-29 121
Msa0489150 AT5G48100.1 27.342 395 251 12 90 457 146 531 2.72e-27 116
Msa0489150 AT5G21100.1 23.963 434 267 12 96 489 151 561 1.94e-26 113
Msa0489150 AT5G03260.1 29.695 394 224 16 91 453 151 522 7.88e-25 108
Msa0489150 AT5G60020.3 27.654 405 245 15 88 453 115 510 2.92e-24 107
Msa0489150 AT5G60020.1 27.654 405 245 15 88 453 147 542 2.98e-24 107
Msa0489150 AT5G01190.1 25.140 537 297 18 8 453 1 523 8.73e-24 105
Msa0489150 AT5G60020.2 27.930 401 241 15 88 449 147 538 2.16e-23 104
Msa0489150 AT2G30210.1 27.595 395 242 15 91 453 153 535 1.77e-22 101
Msa0489150 AT1G18140.1 26.253 419 231 18 98 461 161 556 2.26e-22 101
Msa0489150 AT5G01190.2 25.203 492 268 16 49 453 31 509 2.59e-22 100
Msa0489150 AT2G38080.1 25.945 397 241 15 88 453 149 523 4.69e-22 100
Msa0489150 AT2G29130.1 24.688 401 247 13 91 453 155 538 1.86e-21 98.6
Msa0489150 AT3G09220.2 25.581 387 249 12 91 448 54 430 2.70e-21 97.4
Msa0489150 AT3G09220.1 25.581 387 249 12 91 448 151 527 2.86e-21 97.8
Msa0489150 AT2G46570.1 25.336 446 252 12 91 488 157 569 1.32e-20 95.9
Msa0489150 AT2G46570.2 25.336 446 252 12 91 488 72 484 1.37e-20 95.1

Find 117 sgRNAs with CRISPR-Local

Find 370 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCATCAACGGTACATATAA+AGG 0.235380 3_4:+9343538 Msa0489150:CDS
TTGCAGGTTATAGCTATAAA+TGG 0.248006 3_4:+9340515 Msa0489150:intron
TGTTCTGTTCATCGGCTTGC+TGG 0.257454 3_4:-9343497 None:intergenic
TCTGTGTCGCCGGCTTCTTC+AGG 0.260513 3_4:-9344514 None:intergenic
GAATCTGAGAGCAGAAAATT+TGG 0.265348 3_4:+9344447 Msa0489150:CDS
TCACATCTAGTTAAAGCTTT+TGG 0.272272 3_4:+9345004 Msa0489150:exon
CTATTCAAAATGTGATTAAA+AGG 0.277027 3_4:+9345171 Msa0489150:three_prime_UTR
TAGTAATTCATATTCTTAAT+AGG 0.282613 3_4:+9345205 Msa0489150:three_prime_UTR
TTCTTACCCAACAACGAAAA+AGG 0.291492 3_4:-9343626 None:intergenic
TCCACCACTGCTTCTCCTCT+TGG 0.296372 3_4:+9339627 Msa0489150:CDS
AAGTGTGATTAGTAATTTCT+TGG 0.309191 3_4:+9345072 Msa0489150:three_prime_UTR
TAGTAGAAATTCCCACATTA+TGG 0.323307 3_4:-9341971 None:intergenic
AATAATACTCTTGTACCTAA+TGG 0.326501 3_4:+9341380 Msa0489150:CDS
TCCTCTTGGTGTTCCTCAAA+AGG 0.329327 3_4:+9339641 Msa0489150:CDS
CTTGGATTTAGGATGGACTA+TGG 0.332483 3_4:+9343720 Msa0489150:intron
GTTTCATGATCTATCCCATT+AGG 0.337800 3_4:-9341395 None:intergenic
GCTATAAATGGGAAATTTCC+TGG 0.342290 3_4:+9340527 Msa0489150:CDS
TCATTATGGCAGAAGGTTAC+AGG 0.370428 3_4:+9342179 Msa0489150:CDS
ATAATACTCTTGTACCTAAT+GGG 0.372995 3_4:+9341381 Msa0489150:CDS
AGTAGTCTGTACTCGCGTTC+TGG 0.373371 3_4:-9342124 None:intergenic
CTCTGTTCAAAACTTTCATC+TGG 0.374331 3_4:+9343594 Msa0489150:CDS
CGAAAGGACCCTTGAGGGTT+AGG 0.374840 3_4:-9343304 None:intergenic
TAAAACCTGACGTTCCGTTT+CGG 0.375200 3_4:+9343428 Msa0489150:CDS
GGTTTGTGAATGAATCATTA+TGG 0.383149 3_4:+9342165 Msa0489150:CDS
AATTCCAAGGGTGGAGCATC+TGG 0.393938 3_4:+9342224 Msa0489150:CDS
CCAGATGGTGTTCTTATCAA+TGG 0.394586 3_4:+9341338 Msa0489150:CDS
TCAAAATCATAATCTATTGC+TGG 0.416012 3_4:+9342010 Msa0489150:CDS
TCACCGTCGGGCTGCGCAAA+AGG 0.416320 3_4:-9341125 None:intergenic
CAAGAAACACTTACAATAAG+TGG 0.417064 3_4:+9343760 Msa0489150:CDS
CTAACCCTCAAGGGTCCTTT+CGG 0.421813 3_4:+9343305 Msa0489150:CDS
CCACATTATGGACACGAATT+CGG 0.426819 3_4:-9341959 None:intergenic
GTTCAAAACTTTCATCTGGA+TGG 0.433014 3_4:+9343598 Msa0489150:CDS
ACAACTCGAGCTGCAATTAA+CGG 0.437704 3_4:+9343394 Msa0489150:CDS
TGGAGCATGGACAGCAATCC+TGG 0.442003 3_4:+9344399 Msa0489150:CDS
ATCACTGGTGTTCTGTTCAT+CGG 0.467144 3_4:-9343505 None:intergenic
TCATCAACGGTACATATAAA+GGG 0.471123 3_4:+9343539 Msa0489150:CDS
AGGATTGCTGTCCATGCTCC+AGG 0.473930 3_4:-9344397 None:intergenic
GTTCTGTTCATCGGCTTGCT+GGG 0.478544 3_4:-9343496 None:intergenic
TCATCTGGTGGTGGTGGCAG+AGG 0.480319 3_4:-9342248 None:intergenic
AGAGTATTATTGTACTGATA+AGG 0.480921 3_4:-9341368 None:intergenic
TGCAGGTTATAGCTATAAAT+GGG 0.486118 3_4:+9340516 Msa0489150:intron
TACTAATCACACTTCTTGAC+AGG 0.487280 3_4:-9345063 None:intergenic
CAGATGGTGTTCTTATCAAT+GGG 0.490691 3_4:+9341339 Msa0489150:CDS
TTCCCATGAGCAATGTGAAA+AGG 0.492544 3_4:-9344969 None:intergenic
GCAAGCCGAAACGGAACGTC+AGG 0.492678 3_4:-9343433 None:intergenic
AGGACCAGATGCTCCACCCT+TGG 0.494547 3_4:-9342228 None:intergenic
CTCTAGACAATGTTGGATCA+TGG 0.498904 3_4:+9344425 Msa0489150:CDS
TTTACACTACTCAAATTCCA+AGG 0.507295 3_4:+9342211 Msa0489150:CDS
GAAACAATTAACGTTGATCC+AGG 0.516538 3_4:+9341413 Msa0489150:CDS
TTCAAAACTTTCATCTGGAT+GGG 0.517941 3_4:+9343599 Msa0489150:CDS
ACCAACTTTGATATTCATGC+TGG 0.519723 3_4:+9342071 Msa0489150:CDS
GCTCTAAGATCAACACTTGA+CGG 0.523581 3_4:+9341296 Msa0489150:CDS
TGAAGTTCTGTGTAAACAGT+TGG 0.529500 3_4:-9339597 None:intergenic
ACCAAGAGGAGAAGCAGTGG+TGG 0.530783 3_4:-9339628 None:intergenic
CCGAATTCGTGTCCATAATG+TGG 0.531461 3_4:+9341959 Msa0489150:CDS
GCTGACAACAATCAGCTAAG+AGG 0.532345 3_4:+9343454 Msa0489150:CDS
ATTAGTAATTTCTTGGTCTG+AGG 0.532746 3_4:+9345079 Msa0489150:three_prime_UTR
GTCTGTACTCGCGTTCTGGT+CGG 0.532806 3_4:-9342120 None:intergenic
GCAGATTCTACTTTGAGAAG+TGG 0.534225 3_4:+9344943 Msa0489150:CDS
CCATTGATAAGAACACCATC+TGG 0.534528 3_4:-9341338 None:intergenic
TGCACCAGTCTCTGTGTCGC+CGG 0.537437 3_4:-9344524 None:intergenic
AGAGCAGAAAAGAGTAGGAC+TGG 0.537825 3_4:-9342094 None:intergenic
TGAAGGGTATTACACCGATC+AGG 0.538222 3_4:+9342040 Msa0489150:CDS
GAAGCCGGCGACACAGAGAC+TGG 0.541009 3_4:+9344520 Msa0489150:CDS
TTTGTAGTAACATTAATCAC+AGG 0.544812 3_4:-9340551 None:intergenic
TTGTTGTCAGCAAGCCGAAA+CGG 0.546970 3_4:-9343442 None:intergenic
CGTACCGAAAGGACCCTTGA+GGG 0.550715 3_4:-9343309 None:intergenic
CATAATGAAAATTTCACCGT+CGG 0.555555 3_4:-9341138 None:intergenic
GTTGTGCCGTTGATCGCCAC+CGG 0.555618 3_4:-9343376 None:intergenic
ATAATGAAAATTTCACCGTC+GGG 0.559708 3_4:-9341137 None:intergenic
GTAACATTAATCACAGGTCC+AGG 0.563672 3_4:-9340545 None:intergenic
AGTGAATGTGTATAATCAGC+TGG 0.564829 3_4:+9340586 Msa0489150:CDS
CGAATTCGTGTCCATAATGT+GGG 0.565215 3_4:+9341960 Msa0489150:CDS
ATGATTGATCTATCAATCAC+TGG 0.566439 3_4:-9343520 None:intergenic
GTTGGTGTAATTTGCCTGAT+CGG 0.567425 3_4:-9342054 None:intergenic
GCCAGCATGAATATCAAAGT+TGG 0.570786 3_4:-9342072 None:intergenic
ACAGCACCGGTGGCGATCAA+CGG 0.572276 3_4:+9343370 Msa0489150:CDS
TGAGAGCAGAAAATTTGGAC+AGG 0.573207 3_4:+9344452 Msa0489150:CDS
CTTGTTAAAGGTTACAGCAC+CGG 0.575674 3_4:+9343357 Msa0489150:CDS
CCAGAAAATGTTCTATATTG+CGG 0.576586 3_4:+9344547 Msa0489150:CDS
CTTGACGGTGGAAAAGACCT+TGG 0.578216 3_4:+9341311 Msa0489150:CDS
AATATCTCGCAGCACAACTC+AGG 0.579985 3_4:+9343788 Msa0489150:CDS
TGGTGTTCTTATCAATGGGA+AGG 0.580003 3_4:+9341343 Msa0489150:CDS
AAGAAACACTTACAATAAGT+GGG 0.581952 3_4:+9343761 Msa0489150:CDS
TTAGGATGGACTATGGCGAT+TGG 0.582570 3_4:+9343727 Msa0489150:intron
ATTGTCAATCCTGAAGAAGC+CGG 0.584686 3_4:+9344505 Msa0489150:CDS
CACTACTCAAATTCCAAGGG+TGG 0.584854 3_4:+9342215 Msa0489150:CDS
TGTACTCGCGTTCTGGTCGG+TGG 0.587886 3_4:-9342117 None:intergenic
ACTATATTGTTGCAAGTGCG+AGG 0.588609 3_4:+9342144 Msa0489150:CDS
AACACCAAGAGGAGAAGCAG+TGG 0.595232 3_4:-9339631 None:intergenic
GGTGGAGAGCAGAAAAGAGT+AGG 0.595801 3_4:-9342099 None:intergenic
CTGGTGTCTCTAGACAATGT+TGG 0.597006 3_4:+9344418 Msa0489150:CDS
TTACACTACTCAAATTCCAA+GGG 0.598552 3_4:+9342212 Msa0489150:CDS
GAGCTCGTCCTAACCCTCAA+GGG 0.599281 3_4:+9343296 Msa0489150:CDS
GAGCAGAAAATTTGGACAGG+TGG 0.600104 3_4:+9344455 Msa0489150:CDS
AATTTGGACAGGTGGTACCT+AGG 0.611380 3_4:+9344463 Msa0489150:CDS
TCAGATAAGTTTCTTGACCT+AGG 0.612670 3_4:-9344480 None:intergenic
GAACACCATCTGGTATTCCA+AGG 0.613050 3_4:-9341328 None:intergenic
TTGAAAACAGAGCAATGTTG+AGG 0.615325 3_4:-9339554 None:intergenic
GGTGTTCTTATCAATGGGAA+GGG 0.615393 3_4:+9341344 Msa0489150:CDS
GGAGCTCGTCCTAACCCTCA+AGG 0.616297 3_4:+9343295 Msa0489150:CDS
CCTCAAGGGTCCTTTCGGTA+CGG 0.617590 3_4:+9343310 Msa0489150:CDS
CTATTGCTGGTAGAAACTGA+AGG 0.617963 3_4:+9342023 Msa0489150:CDS
GAATGAATCATTATGGCAGA+AGG 0.620430 3_4:+9342172 Msa0489150:CDS
CTTGATTGAGCCGTACCGAA+AGG 0.621022 3_4:-9343320 None:intergenic
TATTGCTGGTAGAAACTGAA+GGG 0.621251 3_4:+9342024 Msa0489150:CDS
ATGAAGATCTTCTCATAACA+TGG 0.639852 3_4:+9340609 Msa0489150:CDS
CAACATTGTCTAGAGACACC+AGG 0.642184 3_4:-9344417 None:intergenic
AGGCTAAACACATCTGCAAG+TGG 0.642227 3_4:+9343274 Msa0489150:intron
AAAGACCTTGGAATACCAGA+TGG 0.643410 3_4:+9341323 Msa0489150:CDS
ATTGATAGATCAATCATCAA+CGG 0.647112 3_4:+9343526 Msa0489150:CDS
GTTAAAGGTTACAGCACCGG+TGG 0.660172 3_4:+9343360 Msa0489150:CDS
TAGGTCAAGAAACTTATCTG+AGG 0.669852 3_4:+9344482 Msa0489150:CDS
TTGGTATACTCAAGACTACA+CGG 0.674976 3_4:+9341169 Msa0489150:CDS
CTAAGATCAACACTTGACGG+TGG 0.682768 3_4:+9341299 Msa0489150:CDS
TATACACATTCACTATCACA+TGG 0.687900 3_4:-9340577 None:intergenic
CCGTACCGAAAGGACCCTTG+AGG 0.699100 3_4:-9343310 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTACAAATATATTTTTTC+AGG + chr3_4:9341927-9341946 Msa0489150:intron 10.0%
!!! CATTATTTCTTAATTATTTT+TGG + chr3_4:9342378-9342397 Msa0489150:intron 10.0%
!!! TTTTCTAATGATTTTAATTT+AGG + chr3_4:9343855-9343874 Msa0489150:intron 10.0%
!!! TTTCTAATGATTTTAATTTA+GGG + chr3_4:9343856-9343875 Msa0489150:intron 10.0%
!!! TTTTTTGAAAGAAAGAAAAA+AGG - chr3_4:9339752-9339771 None:intergenic 15.0%
!!! CTTTTTAAACATATTTGAAA+GGG - chr3_4:9340133-9340152 None:intergenic 15.0%
!!! ACTTTTTAAACATATTTGAA+AGG - chr3_4:9340134-9340153 None:intergenic 15.0%
!!! AAAAAGTGTAAATTTGAAAA+AGG + chr3_4:9340147-9340166 Msa0489150:intron 15.0%
!! CAGCTTAAATTAAAAAATTA+GGG - chr3_4:9340317-9340336 None:intergenic 15.0%
!! TCAGCTTAAATTAAAAAATT+AGG - chr3_4:9340318-9340337 None:intergenic 15.0%
!! TATGTTTGTTTGATAAATAT+AGG + chr3_4:9341274-9341293 Msa0489150:intron 15.0%
!! ATATCATATCATTATTTGTA+CGG - chr3_4:9341507-9341526 None:intergenic 15.0%
!!! GGATCTTTTTTTAATATAAA+AGG + chr3_4:9342399-9342418 Msa0489150:intron 15.0%
!! TATAAAATATGGTCAAATAA+TGG + chr3_4:9342612-9342631 Msa0489150:intron 15.0%
!! TACAAAATATTGTTAAATAG+TGG + chr3_4:9342953-9342972 Msa0489150:intron 15.0%
!!! GTGCTTTTTAAAATAAATTA+AGG + chr3_4:9343975-9343994 Msa0489150:intron 15.0%
!! TAGTAATTCATATTCTTAAT+AGG + chr3_4:9345205-9345224 Msa0489150:three_prime_UTR 15.0%
!!! TCAAAAAAGTGTTGTTTTTT+TGG + chr3_4:9339764-9339783 Msa0489150:intron 20.0%
!!! CAAAAAAGTGTTGTTTTTTT+GGG + chr3_4:9339765-9339784 Msa0489150:intron 20.0%
!!! AAAAAAAGGACTCATTTTTA+TGG - chr3_4:9339805-9339824 None:intergenic 20.0%
!!! AATTTTTGTTGTGTTTCTTA+TGG + chr3_4:9340087-9340106 Msa0489150:intron 20.0%
!! TAAATTCTTAGAACATTTAG+TGG - chr3_4:9340482-9340501 None:intergenic 20.0%
!!! CAAAATTTTGATTTTTACTG+CGG + chr3_4:9340712-9340731 Msa0489150:intron 20.0%
!! TAAGATAAAAAAGAAGAGAT+AGG + chr3_4:9340781-9340800 Msa0489150:intron 20.0%
!! AAATTGGACAATAAAGTTAA+TGG - chr3_4:9341450-9341469 None:intergenic 20.0%
!! ATTAACTTTATTGTCCAATT+TGG + chr3_4:9341449-9341468 Msa0489150:intron 20.0%
!!! GAAGAATAAGATATAGTTTT+TGG - chr3_4:9341664-9341683 None:intergenic 20.0%
!! AATCAAGGATATAAGAAAAA+GGG - chr3_4:9341770-9341789 None:intergenic 20.0%
!! AAATCAAGGATATAAGAAAA+AGG - chr3_4:9341771-9341790 None:intergenic 20.0%
!!! ATTTTGAATTCGAAAGTTTA+AGG - chr3_4:9341997-9342016 None:intergenic 20.0%
!!! AACAAATATCTATTGTTTCT+GGG + chr3_4:9342576-9342595 Msa0489150:intron 20.0%
!! ATGCTATTCAGTATAAAATA+TGG + chr3_4:9342601-9342620 Msa0489150:intron 20.0%
!!! AGGTAATAATAATTCAGTTT+TGG - chr3_4:9342711-9342730 None:intergenic 20.0%
!! ATATAACAATTTACAAGAGT+GGG + chr3_4:9342751-9342770 Msa0489150:intron 20.0%
!! AAAATCTGTTAGTGTTATAT+CGG - chr3_4:9342987-9343006 None:intergenic 20.0%
!!! TATATTTAGTTCTAATGACT+CGG + chr3_4:9343133-9343152 Msa0489150:intron 20.0%
!!! TACTGATTTTTACTTGTTAA+AGG + chr3_4:9343345-9343364 Msa0489150:CDS 20.0%
!!! ATTTGTAACAATTGATTTCT+TGG + chr3_4:9343702-9343721 Msa0489150:intron 20.0%
!! AATCATTTGAAAAAAACCTA+AGG - chr3_4:9343922-9343941 None:intergenic 20.0%
!!! ATTTTTTCTCGTTAATTAGA+TGG + chr3_4:9344003-9344022 Msa0489150:intron 20.0%
!! TTATAAATCTTCAATTCCTA+GGG + chr3_4:9344329-9344348 Msa0489150:intron 20.0%
!! AAAAATAGACTTGTAACAAA+CGG - chr3_4:9344631-9344650 None:intergenic 20.0%
!!! GTTTTTTGTTCTTTTAGTTA+TGG + chr3_4:9345114-9345133 Msa0489150:three_prime_UTR 20.0%
!! CTATTCAAAATGTGATTAAA+AGG + chr3_4:9345171-9345190 Msa0489150:three_prime_UTR 20.0%
!! ATTCTCACAATTTTCAACAA+TGG + chr3_4:9339500-9339519 Msa0489150:exon 25.0%
!! TTCTCACAATTTTCAACAAT+GGG + chr3_4:9339501-9339520 Msa0489150:exon 25.0%
!!! TTTAAGCTTGTTTTTTCATC+TGG + chr3_4:9339698-9339717 Msa0489150:intron 25.0%
!!! TTAAGCTTGTTTTTTCATCT+GGG + chr3_4:9339699-9339718 Msa0489150:intron 25.0%
!!! TGATCAATTTTTTTGTGTGT+TGG + chr3_4:9339971-9339990 Msa0489150:intron 25.0%
! GCACAAACAAAATAAAATTG+GGG - chr3_4:9340295-9340314 None:intergenic 25.0%
! GGCACAAACAAAATAAAATT+GGG - chr3_4:9340296-9340315 None:intergenic 25.0%
! TTTGTAGTAACATTAATCAC+AGG - chr3_4:9340554-9340573 None:intergenic 25.0%
! AAATAACATACAGAAACCAA+AGG - chr3_4:9340741-9340760 None:intergenic 25.0%
!!! GTATGTTATTTTGAAATGTG+TGG + chr3_4:9340750-9340769 Msa0489150:intron 25.0%
! TGCAAGTATATGAATAACAA+TGG - chr3_4:9340866-9340885 None:intergenic 25.0%
!! GGTGAAATTTTCATTATGAT+TGG + chr3_4:9341143-9341162 Msa0489150:CDS 25.0%
!!! TTTTCATTATGATTGGTGAT+TGG + chr3_4:9341150-9341169 Msa0489150:CDS 25.0%
!! AGAGTATTATTGTACTGATA+AGG - chr3_4:9341371-9341390 None:intergenic 25.0%
! AATAATACTCTTGTACCTAA+TGG + chr3_4:9341380-9341399 Msa0489150:CDS 25.0%
! ATAATACTCTTGTACCTAAT+GGG + chr3_4:9341381-9341400 Msa0489150:CDS 25.0%
! GAAAAAGACTAATACCAAAT+TGG - chr3_4:9341466-9341485 None:intergenic 25.0%
! AGCTTCTAAATGAAACATTT+CGG - chr3_4:9341795-9341814 None:intergenic 25.0%
! GAGTTATATTATTCAGTTGT+TGG + chr3_4:9341877-9341896 Msa0489150:intron 25.0%
! TATTATTCAGTTGTTGGAAT+TGG + chr3_4:9341883-9341902 Msa0489150:intron 25.0%
! TCAAAATCATAATCTATTGC+TGG + chr3_4:9342010-9342029 Msa0489150:CDS 25.0%
! TTGTTATAAAAATCATCTGG+TGG - chr3_4:9342263-9342282 None:intergenic 25.0%
!! ACCAGATGATTTTTATAACA+AGG + chr3_4:9342262-9342281 Msa0489150:CDS 25.0%
!! CCAGATGATTTTTATAACAA+GGG + chr3_4:9342263-9342282 Msa0489150:CDS 25.0%
! GAACAAATATCTATTGTTTC+TGG + chr3_4:9342575-9342594 Msa0489150:intron 25.0%
! GATATAACAATTTACAAGAG+TGG + chr3_4:9342750-9342769 Msa0489150:intron 25.0%
! TGACAACTTCATTAACATAT+TGG + chr3_4:9342843-9342862 Msa0489150:intron 25.0%
! TGGAGTGTAAAATATAAATG+TGG + chr3_4:9343078-9343097 Msa0489150:intron 25.0%
!! GAGTTTTGCTAAAAAGATTA+TGG + chr3_4:9343102-9343121 Msa0489150:intron 25.0%
! ATTGATAGATCAATCATCAA+CGG + chr3_4:9343526-9343545 Msa0489150:CDS 25.0%
!! ACAATTGATTTCTTGGATTT+AGG + chr3_4:9343709-9343728 Msa0489150:intron 25.0%
!! GTAAGTGTTTCTTGAATTTT+CGG - chr3_4:9343754-9343773 None:intergenic 25.0%
! AAGAAACACTTACAATAAGT+GGG + chr3_4:9343761-9343780 Msa0489150:CDS 25.0%
! AGTGCCATCTAATTAAAAAA+GGG - chr3_4:9344211-9344230 None:intergenic 25.0%
! TAGTGCCATCTAATTAAAAA+AGG - chr3_4:9344212-9344231 None:intergenic 25.0%
! ATGTAAAAGTTACAAGCATT+TGG + chr3_4:9344239-9344258 Msa0489150:intron 25.0%
! ACCTAATACATAAATACCTT+TGG + chr3_4:9344273-9344292 Msa0489150:intron 25.0%
!!! TCCAAAGGTATTTATGTATT+AGG - chr3_4:9344277-9344296 None:intergenic 25.0%
! TAATACATAAATACCTTTGG+AGG + chr3_4:9344276-9344295 Msa0489150:intron 25.0%
! AATACATAAATACCTTTGGA+GGG + chr3_4:9344277-9344296 Msa0489150:intron 25.0%
! GTTATAAATCTTCAATTCCT+AGG + chr3_4:9344328-9344347 Msa0489150:intron 25.0%
! TATAAATCTTCAATTCCTAG+GGG + chr3_4:9344330-9344349 Msa0489150:intron 25.0%
!! GTCTATTTTACCAATATAAC+AGG + chr3_4:9344369-9344388 Msa0489150:intron 25.0%
! AAAATAGACTTGTAACAAAC+GGG - chr3_4:9344630-9344649 None:intergenic 25.0%
! AAGTGTGATTAGTAATTTCT+TGG + chr3_4:9345072-9345091 Msa0489150:three_prime_UTR 25.0%
TTTACTTGTGAGAATGAATG+TGG - chr3_4:9339455-9339474 None:intergenic 30.0%
!! TTTTCAACTCTCTGTTTTTC+TGG + chr3_4:9339570-9339589 Msa0489150:CDS 30.0%
ACAAGCTTAAAAGAACGAAA+TGG - chr3_4:9339689-9339708 None:intergenic 30.0%
CAGCAGAAACAAACAAAAAA+AGG - chr3_4:9339819-9339838 None:intergenic 30.0%
CATATAACAAAGTGAAACAG+AGG - chr3_4:9339935-9339954 None:intergenic 30.0%
GTTGAGATTGTATGTGTAAA+TGG + chr3_4:9340006-9340025 Msa0489150:intron 30.0%
!! TTTGATTCTGAGGTTGAAAA+AGG + chr3_4:9340029-9340048 Msa0489150:intron 30.0%
!! TTGATTCTGAGGTTGAAAAA+GGG + chr3_4:9340030-9340049 Msa0489150:intron 30.0%
GGGCACAAACAAAATAAAAT+TGG - chr3_4:9340297-9340316 None:intergenic 30.0%
!! TTATTGTTGATTCTGATTGC+AGG + chr3_4:9340499-9340518 Msa0489150:intron 30.0%
TTGCAGGTTATAGCTATAAA+TGG + chr3_4:9340515-9340534 Msa0489150:intron 30.0%
TGCAGGTTATAGCTATAAAT+GGG + chr3_4:9340516-9340535 Msa0489150:intron 30.0%
TATACACATTCACTATCACA+TGG - chr3_4:9340580-9340599 None:intergenic 30.0%
ATGAAGATCTTCTCATAACA+TGG + chr3_4:9340609-9340628 Msa0489150:CDS 30.0%
AACACATACTATGTCACATT+CGG + chr3_4:9340812-9340831 Msa0489150:intron 30.0%
! TGAGAAAAAATGTTTGTTGC+AGG + chr3_4:9340898-9340917 Msa0489150:intron 30.0%
! TTTCAAGTGAAGGATCAAAT+AGG + chr3_4:9341011-9341030 Msa0489150:intron 30.0%
TTCAAGTGAAGGATCAAATA+GGG + chr3_4:9341012-9341031 Msa0489150:intron 30.0%
! TCCCTTTGTTATCAACAATA+GGG + chr3_4:9341088-9341107 Msa0489150:intron 30.0%
!! TCCCTATTGTTGATAACAAA+GGG - chr3_4:9341092-9341111 None:intergenic 30.0%
ATAATGAAAATTTCACCGTC+GGG - chr3_4:9341140-9341159 None:intergenic 30.0%
CATAATGAAAATTTCACCGT+CGG - chr3_4:9341141-9341160 None:intergenic 30.0%
TTAATGGCGATAATAATACC+TGG - chr3_4:9341434-9341453 None:intergenic 30.0%
!!! CAATTTTTCCACTGGTTTAT+TGG + chr3_4:9341580-9341599 Msa0489150:intron 30.0%
AAATTACTTTACAGAGAGTG+AGG - chr3_4:9341628-9341647 None:intergenic 30.0%
!!! TTTGAACCCTTTTTTTGAAC+AGG + chr3_4:9341741-9341760 Msa0489150:intron 30.0%
!!! TTGAACCCTTTTTTTGAACA+GGG + chr3_4:9341742-9341761 Msa0489150:intron 30.0%
TGAAACATTTCGGAAAATCA+AGG - chr3_4:9341785-9341804 None:intergenic 30.0%
GCTGACTATATCATATAGAA+TGG + chr3_4:9341812-9341831 Msa0489150:intron 30.0%
ATAACTCAAAAAGTAGTCTG+TGG - chr3_4:9341864-9341883 None:intergenic 30.0%
TAGTAGAAATTCCCACATTA+TGG - chr3_4:9341974-9341993 None:intergenic 30.0%
GGTTTGTGAATGAATCATTA+TGG + chr3_4:9342165-9342184 Msa0489150:CDS 30.0%
TTTACACTACTCAAATTCCA+AGG + chr3_4:9342211-9342230 Msa0489150:CDS 30.0%
TTACACTACTCAAATTCCAA+GGG + chr3_4:9342212-9342231 Msa0489150:CDS 30.0%
TTATAAAAATCATCTGGTGG+TGG - chr3_4:9342260-9342279 None:intergenic 30.0%
! CCCTTGTTATAAAAATCATC+TGG - chr3_4:9342266-9342285 None:intergenic 30.0%
! TCTAAGTTAAGTGCAGTTTT+AGG + chr3_4:9342454-9342473 Msa0489150:intron 30.0%
TGGTCAAATAATGGCTATAT+CGG + chr3_4:9342621-9342640 Msa0489150:intron 30.0%
! TTGATCAAACTGCAATTTTC+TGG + chr3_4:9342673-9342692 Msa0489150:intron 30.0%
TTAGTTGATTAACCTCACAA+GGG - chr3_4:9342789-9342808 None:intergenic 30.0%
TGATAACAAATTTCCTTGTG+AGG + chr3_4:9342819-9342838 Msa0489150:intron 30.0%
TTAAATAGGCAACGAAATAG+CGG + chr3_4:9342907-9342926 Msa0489150:intron 30.0%
ATGATTGATCTATCAATCAC+TGG - chr3_4:9343523-9343542 None:intergenic 30.0%
ATCATCAACGGTACATATAA+AGG + chr3_4:9343538-9343557 Msa0489150:CDS 30.0%
TCATCAACGGTACATATAAA+GGG + chr3_4:9343539-9343558 Msa0489150:CDS 30.0%
TTCAAAACTTTCATCTGGAT+GGG + chr3_4:9343599-9343618 Msa0489150:CDS 30.0%
TAGTAAGAAGAGAAAGTGAA+AGG - chr3_4:9343658-9343677 None:intergenic 30.0%
TTGATTTCTTGGATTTAGGA+TGG + chr3_4:9343713-9343732 Msa0489150:intron 30.0%
CAAGAAACACTTACAATAAG+TGG + chr3_4:9343760-9343779 Msa0489150:CDS 30.0%
TTTACTAAGGACATGTTTCA+TGG + chr3_4:9343883-9343902 Msa0489150:intron 30.0%
!!! TGGTTTTAAAAGAGTTCCTT+AGG + chr3_4:9343903-9343922 Msa0489150:intron 30.0%
!!! GTTGCCCTTTTTTAATTAGA+TGG + chr3_4:9344204-9344223 Msa0489150:intron 30.0%
CCAGAAAATGTTCTATATTG+CGG + chr3_4:9344547-9344566 Msa0489150:CDS 30.0%
!! ACTTTTGTTTGTATTGGAGA+GGG - chr3_4:9344573-9344592 None:intergenic 30.0%
!! TACTTTTGTTTGTATTGGAG+AGG - chr3_4:9344574-9344593 None:intergenic 30.0%
!!! GACGTTACTTTTGTTTGTAT+TGG - chr3_4:9344579-9344598 None:intergenic 30.0%
! TCACATCTAGTTAAAGCTTT+TGG + chr3_4:9345004-9345023 Msa0489150:exon 30.0%
ATTAGTAATTTCTTGGTCTG+AGG + chr3_4:9345079-9345098 Msa0489150:three_prime_UTR 30.0%
! CTTACTTTGTACACATTTTC+TGG + chr3_4:9345137-9345156 Msa0489150:three_prime_UTR 30.0%
! AAAAGTTTTGCTTGTTCCAT+TGG + chr3_4:9345280-9345299 Msa0489150:three_prime_UTR 30.0%
TTGAAAACAGAGCAATGTTG+AGG - chr3_4:9339557-9339576 None:intergenic 35.0%
TGAAGTTCTGTGTAAACAGT+TGG - chr3_4:9339600-9339619 None:intergenic 35.0%
TGGAATCAGAAAAGCAAAGA+AGG - chr3_4:9339669-9339688 None:intergenic 35.0%
!! TTGTTTGTTTCTGCTGAAAG+TGG + chr3_4:9339823-9339842 Msa0489150:intron 35.0%
GTGTAAATGGTTTGATTCTG+AGG + chr3_4:9340019-9340038 Msa0489150:intron 35.0%
! GTTTGTGATTTTGTGACTGA+TGG + chr3_4:9340205-9340224 Msa0489150:intron 35.0%
TCACCATTGAAATCACACAA+GGG - chr3_4:9340240-9340259 None:intergenic 35.0%
ATCACCATTGAAATCACACA+AGG - chr3_4:9340241-9340260 None:intergenic 35.0%
GCTATAAATGGGAAATTTCC+TGG + chr3_4:9340527-9340546 Msa0489150:CDS 35.0%
AGTGAATGTGTATAATCAGC+TGG + chr3_4:9340586-9340605 Msa0489150:CDS 35.0%
ATTGTCCAATTCCTTCGAAA+TGG + chr3_4:9340973-9340992 Msa0489150:intron 35.0%
CAATTCCATTTCGAAGGAAT+TGG - chr3_4:9340981-9341000 None:intergenic 35.0%
CAATTCCTTCGAAATGGAAT+TGG + chr3_4:9340979-9340998 Msa0489150:intron 35.0%
! CTCTTTGGAAATTAGTGGAA+GGG - chr3_4:9341052-9341071 None:intergenic 35.0%
! AGAAGCTCTTTGGAAATTAG+TGG - chr3_4:9341057-9341076 None:intergenic 35.0%
ACTAATTTCCAAAGAGCTTC+TGG + chr3_4:9341056-9341075 Msa0489150:intron 35.0%
! GTCCCTTTGTTATCAACAAT+AGG + chr3_4:9341087-9341106 Msa0489150:intron 35.0%
!! CTCCCTATTGTTGATAACAA+AGG - chr3_4:9341093-9341112 None:intergenic 35.0%
TTGGTATACTCAAGACTACA+CGG + chr3_4:9341169-9341188 Msa0489150:CDS 35.0%
CAGATGGTGTTCTTATCAAT+GGG + chr3_4:9341339-9341358 Msa0489150:CDS 35.0%
GTTTCATGATCTATCCCATT+AGG - chr3_4:9341398-9341417 None:intergenic 35.0%
GAAACAATTAACGTTGATCC+AGG + chr3_4:9341413-9341432 Msa0489150:CDS 35.0%
CCAGTGGAAAAATTGAAAGT+GGG - chr3_4:9341575-9341594 None:intergenic 35.0%
ACCAGTGGAAAAATTGAAAG+TGG - chr3_4:9341576-9341595 None:intergenic 35.0%
AACTCAAACCAATAAACCAG+TGG - chr3_4:9341591-9341610 None:intergenic 35.0%
TATTGCTGGTAGAAACTGAA+GGG + chr3_4:9342024-9342043 Msa0489150:CDS 35.0%
ACCAACTTTGATATTCATGC+TGG + chr3_4:9342071-9342090 Msa0489150:CDS 35.0%
GAATGAATCATTATGGCAGA+AGG + chr3_4:9342172-9342191 Msa0489150:CDS 35.0%
!! TGAACCAAGCAAAAAGTATC+AGG + chr3_4:9342294-9342313 Msa0489150:CDS 35.0%
!! CAAACCTGATACTTTTTGCT+TGG - chr3_4:9342301-9342320 None:intergenic 35.0%
CTTAGAATCTGATGTCATAG+AGG + chr3_4:9342324-9342343 Msa0489150:intron 35.0%
TCATAGAGGATTATATCGCA+TGG + chr3_4:9342338-9342357 Msa0489150:intron 35.0%
! TAGACTATAGTTCTATAGCG+TGG + chr3_4:9342544-9342563 Msa0489150:intron 35.0%
!!! TAATTCAGTTTTGGCTAACG+CGG - chr3_4:9342702-9342721 None:intergenic 35.0%
TTATATCCGTAACGCAAAGT+AGG - chr3_4:9342737-9342756 None:intergenic 35.0%
TGATAACAAATTCCCTTGTG+AGG + chr3_4:9342774-9342793 Msa0489150:intron 35.0%
GTTAGTTGATTAACCTCACA+AGG - chr3_4:9342790-9342809 None:intergenic 35.0%
TTTAACAACACTGCTGCAAA+AGG - chr3_4:9342892-9342911 None:intergenic 35.0%
! TTGCAGCAGTGTTGTTAAAT+AGG + chr3_4:9342893-9342912 Msa0489150:intron 35.0%
TTGTCAGTCGCATAAAATAG+CGG - chr3_4:9343017-9343036 None:intergenic 35.0%
! TAATGACTCGGAATGATCAA+GGG + chr3_4:9343145-9343164 Msa0489150:intron 35.0%
TTTACATCATGATGCTGAGT+AGG + chr3_4:9343254-9343273 Msa0489150:intron 35.0%
!!! CAGATGAAAGTTTTGAACAG+AGG - chr3_4:9343596-9343615 None:intergenic 35.0%
CTCTGTTCAAAACTTTCATC+TGG + chr3_4:9343594-9343613 Msa0489150:CDS 35.0%
GTTCAAAACTTTCATCTGGA+TGG + chr3_4:9343598-9343617 Msa0489150:CDS 35.0%
TTCTTACCCAACAACGAAAA+AGG - chr3_4:9343629-9343648 None:intergenic 35.0%
! AATTTAGGGCCTGTTTACTA+AGG + chr3_4:9343870-9343889 Msa0489150:intron 35.0%
GAAACATGTCCTTAGTAAAC+AGG - chr3_4:9343882-9343901 None:intergenic 35.0%
TTAATTAGATGGCACTACTG+AGG + chr3_4:9344014-9344033 Msa0489150:intron 35.0%
TAATTAGATGGCACTACTGA+GGG + chr3_4:9344015-9344034 Msa0489150:intron 35.0%
!!! TTACCCTGTTTTTACACAAG+AGG - chr3_4:9344112-9344131 None:intergenic 35.0%
TCTTGTGTAAAAACAGGGTA+AGG + chr3_4:9344111-9344130 Msa0489150:intron 35.0%
CTAATTAAAAAAGGGCAACC+CGG - chr3_4:9344203-9344222 None:intergenic 35.0%
TTGTAAAATACTCCCTCCAA+AGG - chr3_4:9344292-9344311 None:intergenic 35.0%
CCAGGAAAAACCTGTTATAT+TGG - chr3_4:9344382-9344401 None:intergenic 35.0%
! CCAATATAACAGGTTTTTCC+TGG + chr3_4:9344379-9344398 Msa0489150:intron 35.0%
GAATCTGAGAGCAGAAAATT+TGG + chr3_4:9344447-9344466 Msa0489150:CDS 35.0%
TCAGATAAGTTTCTTGACCT+AGG - chr3_4:9344483-9344502 None:intergenic 35.0%
TAGGTCAAGAAACTTATCTG+AGG + chr3_4:9344482-9344501 Msa0489150:CDS 35.0%
! CCGCAATATAGAACATTTTC+TGG - chr3_4:9344550-9344569 None:intergenic 35.0%
! AAACGAGTATCTCTTTTGAG+TGG + chr3_4:9344727-9344746 Msa0489150:intron 35.0%
! TTCCTTTTCACATTGCTCAT+GGG + chr3_4:9344967-9344986 Msa0489150:CDS 35.0%
! CATCTAGTTAAAGCTTTTGG+CGG + chr3_4:9345007-9345026 Msa0489150:exon 35.0%
TACTAATCACACTTCTTGAC+AGG - chr3_4:9345066-9345085 None:intergenic 35.0%
!! ACAAGCAAAACTTTTGACTC+AGG - chr3_4:9345275-9345294 None:intergenic 35.0%
! AGCAAAGAAGGAACCTTTTG+AGG - chr3_4:9339657-9339676 None:intergenic 40.0%
!! TCATCTGGGTCGTTTTCTTT+TGG + chr3_4:9339713-9339732 Msa0489150:intron 40.0%
! TGTGATTTTGTGACTGATGG+TGG + chr3_4:9340208-9340227 Msa0489150:intron 40.0%
!! TATAGTTTTGCCACCTACTG+TGG + chr3_4:9340419-9340438 Msa0489150:intron 40.0%
ATTCCGATTCATACCACAGT+AGG - chr3_4:9340435-9340454 None:intergenic 40.0%
GTAACATTAATCACAGGTCC+AGG - chr3_4:9340548-9340567 None:intergenic 40.0%
! ATTTTTACTGCGGTGTCCTT+TGG + chr3_4:9340722-9340741 Msa0489150:intron 40.0%
ACATACTATGTCACATTCGG+TGG + chr3_4:9340815-9340834 Msa0489150:intron 40.0%
! AAAAATGTTTGTTGCAGGCC+TGG + chr3_4:9340903-9340922 Msa0489150:intron 40.0%
TACGTCCAATTCCATTTCGA+AGG - chr3_4:9340987-9341006 None:intergenic 40.0%
! GACGTATCAGTTTCAAGTGA+AGG + chr3_4:9341001-9341020 Msa0489150:intron 40.0%
! GCTCTTTGGAAATTAGTGGA+AGG - chr3_4:9341053-9341072 None:intergenic 40.0%
AATTTCCAAAGAGCTTCTGG+TGG + chr3_4:9341059-9341078 Msa0489150:intron 40.0%
!! GCTCTAAGATCAACACTTGA+CGG + chr3_4:9341296-9341315 Msa0489150:CDS 40.0%
AAAGACCTTGGAATACCAGA+TGG + chr3_4:9341323-9341342 Msa0489150:CDS 40.0%
CCATTGATAAGAACACCATC+TGG - chr3_4:9341341-9341360 None:intergenic 40.0%
CCAGATGGTGTTCTTATCAA+TGG + chr3_4:9341338-9341357 Msa0489150:CDS 40.0%
TGGTGTTCTTATCAATGGGA+AGG + chr3_4:9341343-9341362 Msa0489150:CDS 40.0%
GGTGTTCTTATCAATGGGAA+GGG + chr3_4:9341344-9341363 Msa0489150:CDS 40.0%
GGAAAAATTGAAAGTGGGTG+TGG - chr3_4:9341570-9341589 None:intergenic 40.0%
! CCCACTTTCAATTTTTCCAC+TGG + chr3_4:9341572-9341591 Msa0489150:intron 40.0%
TGATGTTCTCACAGAAAGCA+CGG - chr3_4:9341718-9341737 None:intergenic 40.0%
GGGTTCCCTGTTCAAAAAAA+GGG - chr3_4:9341750-9341769 None:intergenic 40.0%
AGGGTTCCCTGTTCAAAAAA+AGG - chr3_4:9341751-9341770 None:intergenic 40.0%
GGAACAGTTTGAATTCTGAC+TGG + chr3_4:9341904-9341923 Msa0489150:intron 40.0%
CCACATTATGGACACGAATT+CGG - chr3_4:9341962-9341981 None:intergenic 40.0%
CGAATTCGTGTCCATAATGT+GGG + chr3_4:9341960-9341979 Msa0489150:CDS 40.0%
CTATTGCTGGTAGAAACTGA+AGG + chr3_4:9342023-9342042 Msa0489150:CDS 40.0%
! GTTGGTGTAATTTGCCTGAT+CGG - chr3_4:9342057-9342076 None:intergenic 40.0%
GCCAGCATGAATATCAAAGT+TGG - chr3_4:9342075-9342094 None:intergenic 40.0%
ACTATATTGTTGCAAGTGCG+AGG + chr3_4:9342144-9342163 Msa0489150:CDS 40.0%
TCATTATGGCAGAAGGTTAC+AGG + chr3_4:9342179-9342198 Msa0489150:CDS 40.0%
!! TAAAAATCATCTGGTGGTGG+TGG - chr3_4:9342257-9342276 None:intergenic 40.0%
ATTGTTTGCGAATGTCAGTG+AGG + chr3_4:9342488-9342507 Msa0489150:intron 40.0%
! TATATCGGAGCGCTATAGTA+TGG + chr3_4:9342636-9342655 Msa0489150:intron 40.0%
CCTATACCTACTTTGCGTTA+CGG + chr3_4:9342728-9342747 Msa0489150:intron 40.0%
ATGAAGTTGTCAACCTCACA+AGG - chr3_4:9342835-9342854 None:intergenic 40.0%
TTAGTGTTATATCGGCGCTA+GGG - chr3_4:9342979-9342998 None:intergenic 40.0%
AGTTAAGTGACAACTCACGT+TGG + chr3_4:9343051-9343070 Msa0489150:intron 40.0%
! CTAATGACTCGGAATGATCA+AGG + chr3_4:9343144-9343163 Msa0489150:intron 40.0%
! TGATGTTTTCCCTTATCAGC+TGG + chr3_4:9343215-9343234 Msa0489150:intron 40.0%
GCATATTAGCCAGCTGATAA+GGG - chr3_4:9343227-9343246 None:intergenic 40.0%
TGCATATTAGCCAGCTGATA+AGG - chr3_4:9343228-9343247 None:intergenic 40.0%
CTTGTTAAAGGTTACAGCAC+CGG + chr3_4:9343357-9343376 Msa0489150:CDS 40.0%
ACAACTCGAGCTGCAATTAA+CGG + chr3_4:9343394-9343413 Msa0489150:CDS 40.0%
TAAAACCTGACGTTCCGTTT+CGG + chr3_4:9343428-9343447 Msa0489150:CDS 40.0%
ATCACTGGTGTTCTGTTCAT+CGG - chr3_4:9343508-9343527 None:intergenic 40.0%
!! GGTACTCCTTTTTCGTTGTT+GGG + chr3_4:9343620-9343639 Msa0489150:CDS 40.0%
!! CTTGGATTTAGGATGGACTA+TGG + chr3_4:9343720-9343739 Msa0489150:intron 40.0%
CATGTTAGCAAGCTTATGCA+TGG + chr3_4:9343946-9343965 Msa0489150:intron 40.0%
AATTAGATGGCACTACTGAG+GGG + chr3_4:9344016-9344035 Msa0489150:intron 40.0%
GTTGTTGTCATGTGACTGTA+AGG + chr3_4:9344061-9344080 Msa0489150:intron 40.0%
ACTGCCTCTTGTGTAAAAAC+AGG + chr3_4:9344105-9344124 Msa0489150:intron 40.0%
CTGCCTCTTGTGTAAAAACA+GGG + chr3_4:9344106-9344125 Msa0489150:intron 40.0%
CGTACAATACACCAAATGGT+GGG + chr3_4:9344137-9344156 Msa0489150:intron 40.0%
AATGATTGATTGAGTCCCCT+AGG - chr3_4:9344348-9344367 None:intergenic 40.0%
CTCTAGACAATGTTGGATCA+TGG + chr3_4:9344425-9344444 Msa0489150:CDS 40.0%
TGAGAGCAGAAAATTTGGAC+AGG + chr3_4:9344452-9344471 Msa0489150:CDS 40.0%
ATTGTCAATCCTGAAGAAGC+CGG + chr3_4:9344505-9344524 Msa0489150:CDS 40.0%
GGGTACAAAAACACTGTCAA+TGG - chr3_4:9344610-9344629 None:intergenic 40.0%
! GCAGATTCTACTTTGAGAAG+TGG + chr3_4:9344943-9344962 Msa0489150:CDS 40.0%
! CTTCCTTTTCACATTGCTCA+TGG + chr3_4:9344966-9344985 Msa0489150:CDS 40.0%
TTCCCATGAGCAATGTGAAA+AGG - chr3_4:9344972-9344991 None:intergenic 40.0%
!! TCCTCTTGGTGTTCCTCAAA+AGG + chr3_4:9339641-9339660 Msa0489150:CDS 45.0%
!! ACCTTTTGAGGAACACCAAG+AGG - chr3_4:9339645-9339664 None:intergenic 45.0%
!! TTTGTGACTGATGGTGGACT+TGG + chr3_4:9340214-9340233 Msa0489150:intron 45.0%
TGGCCCTTGTGTGATTTCAA+TGG + chr3_4:9340234-9340253 Msa0489150:intron 45.0%
CCACCTACTGTGGTATGAAT+CGG + chr3_4:9340429-9340448 Msa0489150:intron 45.0%
CAAATCCACCAGAAGCTCTT+TGG - chr3_4:9341067-9341086 None:intergenic 45.0%
!! CAAAGAGCTTCTGGTGGATT+TGG + chr3_4:9341065-9341084 Msa0489150:intron 45.0%
CTAAGATCAACACTTGACGG+TGG + chr3_4:9341299-9341318 Msa0489150:CDS 45.0%
GAACACCATCTGGTATTCCA+AGG - chr3_4:9341331-9341350 None:intergenic 45.0%
TGTACGCTGTATGTAGGCAT+TGG - chr3_4:9341547-9341566 None:intergenic 45.0%
CCGAATTCGTGTCCATAATG+TGG + chr3_4:9341959-9341978 Msa0489150:CDS 45.0%
!! TGAAGGGTATTACACCGATC+AGG + chr3_4:9342040-9342059 Msa0489150:CDS 45.0%
AGAGCAGAAAAGAGTAGGAC+TGG - chr3_4:9342097-9342116 None:intergenic 45.0%
CACTACTCAAATTCCAAGGG+TGG + chr3_4:9342215-9342234 Msa0489150:CDS 45.0%
GCTATAGTATGGCTGCATAG+CGG + chr3_4:9342647-9342666 Msa0489150:intron 45.0%
CCGTAACGCAAAGTAGGTAT+AGG - chr3_4:9342731-9342750 None:intergenic 45.0%
GTTAGTGTTATATCGGCGCT+AGG - chr3_4:9342980-9342999 None:intergenic 45.0%
! TGACAACTCACGTTGGTTGA+TGG + chr3_4:9343058-9343077 Msa0489150:intron 45.0%
AGGCTAAACACATCTGCAAG+TGG + chr3_4:9343274-9343293 Msa0489150:intron 45.0%
TTGTTGTCAGCAAGCCGAAA+CGG - chr3_4:9343445-9343464 None:intergenic 45.0%
GCTGACAACAATCAGCTAAG+AGG + chr3_4:9343454-9343473 Msa0489150:CDS 45.0%
!! GGGTACTCCTTTTTCGTTGT+TGG + chr3_4:9343619-9343638 Msa0489150:CDS 45.0%
!! TTAGGATGGACTATGGCGAT+TGG + chr3_4:9343727-9343746 Msa0489150:intron 45.0%
AATATCTCGCAGCACAACTC+AGG + chr3_4:9343788-9343807 Msa0489150:CDS 45.0%
GTTAGCAAGCTTATGCATGG+AGG + chr3_4:9343949-9343968 Msa0489150:intron 45.0%
GTCATGTGACTGTAAGGTCA+CGG + chr3_4:9344067-9344086 Msa0489150:intron 45.0%
TCATGTGACTGTAAGGTCAC+GGG + chr3_4:9344068-9344087 Msa0489150:intron 45.0%
TTACACAAGAGGCAGTTTCC+AGG - chr3_4:9344101-9344120 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG + chr3_4:9344133-9344152 Msa0489150:intron 45.0%
GCGTACAATACACCAAATGG+TGG + chr3_4:9344136-9344155 Msa0489150:intron 45.0%
! AACAGGTTTTTCCTGGAGCA+TGG + chr3_4:9344386-9344405 Msa0489150:intron 45.0%
CAACATTGTCTAGAGACACC+AGG - chr3_4:9344420-9344439 None:intergenic 45.0%
CTGGTGTCTCTAGACAATGT+TGG + chr3_4:9344418-9344437 Msa0489150:CDS 45.0%
GAGCAGAAAATTTGGACAGG+TGG + chr3_4:9344455-9344474 Msa0489150:CDS 45.0%
AATTTGGACAGGTGGTACCT+AGG + chr3_4:9344463-9344482 Msa0489150:CDS 45.0%
!!! GATTATAAATTAAATTTTAA+AGG + chr3_4:9340393-9340412 Msa0489150:intron 5.0%
!! AATATATAATAAAATGAAAT+AGG - chr3_4:9342428-9342447 None:intergenic 5.0%
AACACCAAGAGGAGAAGCAG+TGG - chr3_4:9339634-9339653 None:intergenic 50.0%
CCGATTCATACCACAGTAGG+TGG - chr3_4:9340432-9340451 None:intergenic 50.0%
TTACGCCGCATTTGAACACC+AGG - chr3_4:9340924-9340943 None:intergenic 50.0%
TTCAAATGCGGCGTAACTCG+TGG + chr3_4:9340928-9340947 Msa0489150:intron 50.0%
CTTGACGGTGGAAAAGACCT+TGG + chr3_4:9341311-9341330 Msa0489150:CDS 50.0%
GTGTGGTGTACGCTGTATGT+AGG - chr3_4:9341553-9341572 None:intergenic 50.0%
GGTGGAGAGCAGAAAAGAGT+AGG - chr3_4:9342102-9342121 None:intergenic 50.0%
AGTAGTCTGTACTCGCGTTC+TGG - chr3_4:9342127-9342146 None:intergenic 50.0%
! AATTCCAAGGGTGGAGCATC+TGG + chr3_4:9342224-9342243 Msa0489150:CDS 50.0%
CTAACCCTCAAGGGTCCTTT+CGG + chr3_4:9343305-9343324 Msa0489150:CDS 50.0%
CTTGATTGAGCCGTACCGAA+AGG - chr3_4:9343323-9343342 None:intergenic 50.0%
! GTTAAAGGTTACAGCACCGG+TGG + chr3_4:9343360-9343379 Msa0489150:CDS 50.0%
!! GTTCTGTTCATCGGCTTGCT+GGG - chr3_4:9343499-9343518 None:intergenic 50.0%
!! TGTTCTGTTCATCGGCTTGC+TGG - chr3_4:9343500-9343519 None:intergenic 50.0%
CAACTTTACCAGTTGCGCCA+AGG - chr3_4:9344045-9344064 None:intergenic 50.0%
TCCACCACTGCTTCTCCTCT+TGG + chr3_4:9339627-9339646 Msa0489150:CDS 55.0%
ACCAAGAGGAGAAGCAGTGG+TGG - chr3_4:9339631-9339650 None:intergenic 55.0%
GCAGGCCTGGTGTTCAAATG+CGG + chr3_4:9340916-9340935 Msa0489150:intron 55.0%
TCGTGGCAGGATGGAGTTCT+TGG + chr3_4:9340945-9340964 Msa0489150:intron 55.0%
! ATTCCTTTTGCGCAGCCCGA+CGG + chr3_4:9341122-9341141 Msa0489150:CDS 55.0%
GTCTGTACTCGCGTTCTGGT+CGG - chr3_4:9342123-9342142 None:intergenic 55.0%
GAGCTCGTCCTAACCCTCAA+GGG + chr3_4:9343296-9343315 Msa0489150:CDS 55.0%
CGAAAGGACCCTTGAGGGTT+AGG - chr3_4:9343307-9343326 None:intergenic 55.0%
CGTACCGAAAGGACCCTTGA+GGG - chr3_4:9343312-9343331 None:intergenic 55.0%
CCTCAAGGGTCCTTTCGGTA+CGG + chr3_4:9343310-9343329 Msa0489150:CDS 55.0%
GCACTACTGAGGGGTAACCT+TGG + chr3_4:9344025-9344044 Msa0489150:intron 55.0%
AAGGTCACGGGTTCAAGTCC+TGG + chr3_4:9344080-9344099 Msa0489150:intron 55.0%
AATGCGGCGTAACTCGTGGC+AGG + chr3_4:9340932-9340951 Msa0489150:intron 60.0%
TGTACTCGCGTTCTGGTCGG+TGG - chr3_4:9342120-9342139 None:intergenic 60.0%
AGGACCAGATGCTCCACCCT+TGG - chr3_4:9342231-9342250 None:intergenic 60.0%
!! TCATCTGGTGGTGGTGGCAG+AGG - chr3_4:9342251-9342270 None:intergenic 60.0%
GGAGCTCGTCCTAACCCTCA+AGG + chr3_4:9343295-9343314 Msa0489150:CDS 60.0%
CCGTACCGAAAGGACCCTTG+AGG - chr3_4:9343313-9343332 None:intergenic 60.0%
!! ACAGCACCGGTGGCGATCAA+CGG + chr3_4:9343370-9343389 Msa0489150:CDS 60.0%
! GTTGTGCCGTTGATCGCCAC+CGG - chr3_4:9343379-9343398 None:intergenic 60.0%
GCAAGCCGAAACGGAACGTC+AGG - chr3_4:9343436-9343455 None:intergenic 60.0%
AGGGGTAACCTTGGCGCAAC+TGG + chr3_4:9344034-9344053 Msa0489150:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + chr3_4:9344149-9344168 Msa0489150:intron 60.0%
ATGCGGGAGCTTCAGTGCAC+CGG + chr3_4:9344181-9344200 Msa0489150:intron 60.0%
!! TCTGTGTCGCCGGCTTCTTC+AGG - chr3_4:9344517-9344536 None:intergenic 60.0%
TGCACCAGTCTCTGTGTCGC+CGG - chr3_4:9344527-9344546 None:intergenic 60.0%
CGGCGTAACTCGTGGCAGGA+TGG + chr3_4:9340936-9340955 Msa0489150:intron 65.0%
TCACCGTCGGGCTGCGCAAA+AGG - chr3_4:9341128-9341147 None:intergenic 65.0%
CGGGAAGGGGTCCCACCATT+TGG - chr3_4:9344151-9344170 None:intergenic 65.0%
CTGAAGCTCCCGCATCCGCA+GGG - chr3_4:9344176-9344195 None:intergenic 65.0%
ACTGAAGCTCCCGCATCCGC+AGG - chr3_4:9344177-9344196 None:intergenic 65.0%
TGCGGGAGCTTCAGTGCACC+GGG + chr3_4:9344182-9344201 Msa0489150:intron 65.0%
GAAGCCGGCGACACAGAGAC+TGG + chr3_4:9344520-9344539 Msa0489150:CDS 65.0%
CATCCGCAGGGTCCGGGAAG+GGG - chr3_4:9344164-9344183 None:intergenic 70.0%
GCATCCGCAGGGTCCGGGAA+GGG - chr3_4:9344165-9344184 None:intergenic 70.0%
CTTCCCGGACCCTGCGGATG+CGG + chr3_4:9344164-9344183 Msa0489150:intron 70.0%
TTCCCGGACCCTGCGGATGC+GGG + chr3_4:9344165-9344184 Msa0489150:intron 70.0%
GGACCCCTTCCCGGACCCTG+CGG + chr3_4:9344158-9344177 Msa0489150:intron 75.0%
CGCATCCGCAGGGTCCGGGA+AGG - chr3_4:9344166-9344185 None:intergenic 75.0%
CTCCCGCATCCGCAGGGTCC+GGG - chr3_4:9344170-9344189 None:intergenic 75.0%
GCTCCCGCATCCGCAGGGTC+CGG - chr3_4:9344171-9344190 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 9339410 9345316 9339410 ID=Msa0489150;Name=Msa0489150
chr3_4 mRNA 9339410 9345316 9339410 ID=Msa0489150-mRNA-1;Parent=Msa0489150;Name=Msa0489150-mRNA-1;_AED=0.14;_eAED=0.14;_QI=87|0.88|0.9|1|0.77|0.7|10|299|528
chr3_4 exon 9339410 9339447 9339410 ID=Msa0489150-mRNA-1:exon:3069;Parent=Msa0489150-mRNA-1
chr3_4 exon 9339470 9339662 9339470 ID=Msa0489150-mRNA-1:exon:3070;Parent=Msa0489150-mRNA-1
chr3_4 exon 9340521 9340630 9340521 ID=Msa0489150-mRNA-1:exon:3071;Parent=Msa0489150-mRNA-1
chr3_4 exon 9341109 9341190 9341109 ID=Msa0489150-mRNA-1:exon:3072;Parent=Msa0489150-mRNA-1
chr3_4 exon 9341296 9341434 9341296 ID=Msa0489150-mRNA-1:exon:3073;Parent=Msa0489150-mRNA-1
chr3_4 exon 9341949 9342315 9341949 ID=Msa0489150-mRNA-1:exon:3074;Parent=Msa0489150-mRNA-1
chr3_4 exon 9343276 9343641 9343276 ID=Msa0489150-mRNA-1:exon:3075;Parent=Msa0489150-mRNA-1
chr3_4 exon 9343731 9343809 9343731 ID=Msa0489150-mRNA-1:exon:3076;Parent=Msa0489150-mRNA-1
chr3_4 exon 9344391 9344590 9344391 ID=Msa0489150-mRNA-1:exon:3077;Parent=Msa0489150-mRNA-1
chr3_4 exon 9344918 9345316 9344918 ID=Msa0489150-mRNA-1:exon:3078;Parent=Msa0489150-mRNA-1
chr3_4 five_prime_UTR 9339410 9339447 9339410 ID=Msa0489150-mRNA-1:five_prime_utr;Parent=Msa0489150-mRNA-1
chr3_4 five_prime_UTR 9339470 9339518 9339470 ID=Msa0489150-mRNA-1:five_prime_utr;Parent=Msa0489150-mRNA-1
chr3_4 CDS 9339519 9339662 9339519 ID=Msa0489150-mRNA-1:cds;Parent=Msa0489150-mRNA-1
chr3_4 CDS 9340521 9340630 9340521 ID=Msa0489150-mRNA-1:cds;Parent=Msa0489150-mRNA-1
chr3_4 CDS 9341109 9341190 9341109 ID=Msa0489150-mRNA-1:cds;Parent=Msa0489150-mRNA-1
chr3_4 CDS 9341296 9341434 9341296 ID=Msa0489150-mRNA-1:cds;Parent=Msa0489150-mRNA-1
chr3_4 CDS 9341949 9342315 9341949 ID=Msa0489150-mRNA-1:cds;Parent=Msa0489150-mRNA-1
chr3_4 CDS 9343276 9343641 9343276 ID=Msa0489150-mRNA-1:cds;Parent=Msa0489150-mRNA-1
chr3_4 CDS 9343731 9343809 9343731 ID=Msa0489150-mRNA-1:cds;Parent=Msa0489150-mRNA-1
chr3_4 CDS 9344391 9344590 9344391 ID=Msa0489150-mRNA-1:cds;Parent=Msa0489150-mRNA-1
chr3_4 CDS 9344918 9345017 9344918 ID=Msa0489150-mRNA-1:cds;Parent=Msa0489150-mRNA-1
chr3_4 three_prime_UTR 9345018 9345316 9345018 ID=Msa0489150-mRNA-1:three_prime_utr;Parent=Msa0489150-mRNA-1
Gene Sequence

>Msa0489150

ATGGGTCTCTTCAGATTTTCTCTCTGTTTTTTCATCCTCAACATTGCTCTGTTTTCAACTCTCTGTTTTTCTGGTGATCCAACTGTTTACACAGAACTTCACGTCTCTTCCACCACTGCTTCTCCTCTTGGTGTTCCTCAAAAGGTTATAGCTATAAATGGGAAATTTCCTGGACCTGTGATTAATGTTACTACAAATAACCATGTGATAGTGAATGTGTATAATCAGCTGGATGAAGATCTTCTCATAACATGGGAGATTATACAGATTCCTTTTGCGCAGCCCGACGGTGAAATTTTCATTATGATTGGTGATTGGTATACTCAAGACTACACGGCTCTAAGATCAACACTTGACGGTGGAAAAGACCTTGGAATACCAGATGGTGTTCTTATCAATGGGAAGGGACCTTATCAGTACAATAATACTCTTGTACCTAATGGGATAGATCATGAAACAATTAACGTTGATCCAGGCAAGACTTACCGAATTCGTGTCCATAATGTGGGAATTTCTACTACCTTAAACTTTCGAATTCAAAATCATAATCTATTGCTGGTAGAAACTGAAGGGTATTACACCGATCAGGCAAATTACACCAACTTTGATATTCATGCTGGCCAGTCCTACTCTTTTCTGCTCTCCACCGACCAGAACGCGAGTACAGACTACTATATTGTTGCAAGTGCGAGGTTTGTGAATGAATCATTATGGCAGAAGGTTACAGGTGTTGCTGTTTTACACTACTCAAATTCCAAGGGTGGAGCATCTGGTCCTCTGCCACCACCACCAGATGATTTTTATAACAAGGGCGCATCAATGAACCAAGCAAAAAGTATCAGGCTAAACACATCTGCAAGTGGAGCTCGTCCTAACCCTCAAGGGTCCTTTCGGTACGGCTCAATCAAGATTACTGATTTTTACTTGTTAAAGGTTACAGCACCGGTGGCGATCAACGGCACAACTCGAGCTGCAATTAACGGAATCTCATTTCTAAAACCTGACGTTCCGTTTCGGCTTGCTGACAACAATCAGCTAAGAGGAATTTATAAGCTTGATTTTCCCAGCAAGCCGATGAACAGAACACCAGTGATTGATAGATCAATCATCAACGGTACATATAAAGGGTTCATTGAGATTGTATTGCAAAACAATGACTCCTCTGTTCAAAACTTTCATCTGGATGGGTACTCCTTTTTCGTTGTTGGGATGGACTATGGCGATTGGTCCGAAAATTCAAGAAACACTTACAATAAGTGGGATGCAATATCTCGCAGCACAACTCAGGTTTTTCCTGGAGCATGGACAGCAATCCTGGTGTCTCTAGACAATGTTGGATCATGGAATCTGAGAGCAGAAAATTTGGACAGGTGGTACCTAGGTCAAGAAACTTATCTGAGGATTGTCAATCCTGAAGAAGCCGGCGACACAGAGACTGGTGCACCAGAAAATGTTCTATATTGCGGCCCTCTCCAATACAAACAAAAAAAGCAGACACATTCTTCATCTTCTGCAGATTCTACTTTGAGAAGTGGCTTCCTTTTCACATTGCTCATGGGAATTCTTGTGATTTTCACATCTAGTTAA
Protein sequence

>Msa0489150

MGLFRFSLCFFILNIALFSTLCFSGDPTVYTELHVSSTTASPLGVPQKVIAINGKFPGPVINVTTNNHVIVNVYNQLDEDLLITWEIIQIPFAQPDGEIFIMIGDWYTQDYTALRSTLDGGKDLGIPDGVLINGKGPYQYNNTLVPNGIDHETINVDPGKTYRIRVHNVGISTTLNFRIQNHNLLLVETEGYYTDQANYTNFDIHAGQSYSFLLSTDQNASTDYYIVASARFVNESLWQKVTGVAVLHYSNSKGGASGPLPPPPDDFYNKGASMNQAKSIRLNTSASGARPNPQGSFRYGSIKITDFYLLKVTAPVAINGTTRAAINGISFLKPDVPFRLADNNQLRGIYKLDFPSKPMNRTPVIDRSIINGTYKGFIEIVLQNNDSSVQNFHLDGYSFFVVGMDYGDWSENSRNTYNKWDAISRSTTQVFPGAWTAILVSLDNVGSWNLRAENLDRWYLGQETYLRIVNPEEAGDTETGAPENVLYCGPLQYKQKKQTHSSSSADSTLRSGFLFTLLMGILVIFTSS*