Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0489740 | XP_003598315.1 | 98.976 | 293 | 3 | 0 | 1 | 293 | 1 | 293 | 0.0 | 588 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0489740 | sp|Q9FKT4|QKIL2_ARATH | 73.759 | 282 | 70 | 3 | 11 | 292 | 36 | 313 | 2.77e-146 | 416 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0489740 | G7J0G1 | 98.976 | 293 | 3 | 0 | 1 | 293 | 1 | 293 | 0.0 | 588 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0394410 | Msa0489740 | 0.878660 | 2.345954e-69 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0489740 | MtrunA17_Chr3g0080071 | 98.976 | 293 | 3 | 0 | 1 | 293 | 1 | 293 | 0.0 | 588 |
| Msa0489740 | MtrunA17_Chr7g0245301 | 57.634 | 262 | 98 | 6 | 36 | 290 | 23 | 278 | 7.23e-93 | 276 |
| Msa0489740 | MtrunA17_Chr8g0334451 | 56.818 | 264 | 99 | 6 | 30 | 291 | 24 | 274 | 6.87e-91 | 271 |
| Msa0489740 | MtrunA17_Chr5g0432901 | 51.916 | 287 | 106 | 5 | 20 | 291 | 10 | 279 | 1.15e-89 | 268 |
| Msa0489740 | MtrunA17_Chr3g0108401 | 55.253 | 257 | 104 | 7 | 40 | 291 | 10 | 260 | 3.16e-85 | 256 |
| Msa0489740 | MtrunA17_Chr2g0276961 | 50.923 | 271 | 112 | 6 | 35 | 291 | 47 | 310 | 3.20e-79 | 243 |
| Msa0489740 | MtrunA17_Chr4g0018581 | 39.623 | 159 | 85 | 5 | 113 | 269 | 184 | 333 | 1.64e-25 | 106 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0489740 | AT5G56140.1 | 73.759 | 282 | 70 | 3 | 11 | 292 | 36 | 313 | 2.81e-147 | 416 |
| Msa0489740 | AT4G26480.3 | 72.085 | 283 | 73 | 4 | 11 | 293 | 32 | 308 | 4.83e-142 | 402 |
| Msa0489740 | AT4G26480.1 | 72.085 | 283 | 73 | 4 | 11 | 293 | 32 | 308 | 4.83e-142 | 402 |
| Msa0489740 | AT4G26480.2 | 76.754 | 228 | 48 | 3 | 66 | 293 | 1 | 223 | 4.22e-124 | 353 |
| Msa0489740 | AT3G08620.1 | 51.027 | 292 | 126 | 6 | 5 | 291 | 2 | 281 | 2.60e-87 | 263 |
| Msa0489740 | AT2G38610.2 | 54.135 | 266 | 102 | 7 | 37 | 291 | 28 | 284 | 1.35e-85 | 258 |
| Msa0489740 | AT2G38610.1 | 54.135 | 266 | 102 | 7 | 37 | 291 | 28 | 284 | 1.35e-85 | 258 |
| Msa0489740 | AT1G09660.1 | 52.330 | 279 | 115 | 8 | 24 | 291 | 25 | 296 | 1.61e-85 | 258 |
| Msa0489740 | AT1G09660.3 | 52.330 | 279 | 115 | 8 | 24 | 291 | 25 | 296 | 1.61e-85 | 258 |
| Msa0489740 | AT3G08620.2 | 53.112 | 241 | 103 | 4 | 56 | 291 | 1 | 236 | 1.05e-76 | 234 |
| Msa0489740 | AT1G09660.2 | 51.282 | 234 | 98 | 6 | 24 | 248 | 25 | 251 | 1.35e-69 | 216 |
| Msa0489740 | AT5G51300.1 | 45.455 | 121 | 58 | 4 | 150 | 269 | 247 | 360 | 1.82e-24 | 103 |
| Msa0489740 | AT5G51300.2 | 45.455 | 121 | 58 | 4 | 150 | 269 | 247 | 360 | 1.82e-24 | 103 |
| Msa0489740 | AT5G51300.3 | 45.455 | 121 | 58 | 4 | 150 | 269 | 247 | 360 | 1.82e-24 | 103 |
Find 121 sgRNAs with CRISPR-Local
Find 379 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCTCACTCGCCCTTTAA+AGG | 0.165755 | 3_4:+10415740 | None:intergenic |
| CAGATATCTAAGTGAGTTAT+TGG | 0.189010 | 3_4:-10420057 | Msa0489740:CDS |
| AAGGGCGAGTGAGAAGATTT+TGG | 0.210827 | 3_4:-10415734 | Msa0489740:three_prime_UTR |
| TGTCTTCTGCATTGCATCTA+TGG | 0.234143 | 3_4:-10415376 | Msa0489740:three_prime_UTR |
| CAGTGCCTCGATCGCAGTTT+AGG | 0.253137 | 3_4:+10415648 | None:intergenic |
| GAATGAACCTCTCCATATTC+TGG | 0.257374 | 3_4:-10416089 | Msa0489740:CDS |
| CTCTCTCTCTGAGATGGCTT+TGG | 0.262037 | 3_4:+10420927 | None:intergenic |
| TGTGCAGTGTGTTTACATTC+AGG | 0.322794 | 3_4:-10415605 | Msa0489740:three_prime_UTR |
| TTGCGTGTTACGACAATCTT+GGG | 0.343708 | 3_4:-10417519 | Msa0489740:CDS |
| ATTCTGCCTCAACCAGAATA+TGG | 0.350579 | 3_4:+10416077 | None:intergenic |
| TCTCTCTCTGAGATGGCTTT+GGG | 0.365256 | 3_4:+10420928 | None:intergenic |
| TGATTGCAGTTTAACTTTGT+TGG | 0.376067 | 3_4:-10416695 | Msa0489740:intron |
| CTTCTCACTCGCCCTTTAAA+GGG | 0.380056 | 3_4:+10415741 | None:intergenic |
| CTCCGGCGCCGGCAGGTACA+TGG | 0.383567 | 3_4:-10420881 | Msa0489740:CDS |
| GAGAGATTTGTGAGTGAGTG+AGG | 0.402278 | 3_4:+10420999 | None:intergenic |
| TATAATGGTCCGCTTGAGTT+TGG | 0.403763 | 3_4:-10415556 | Msa0489740:three_prime_UTR |
| CCGACTGCCGTGTCTTGATC+AGG | 0.410981 | 3_4:-10416622 | Msa0489740:CDS |
| GAGAGTTTCCTCTCGGGCCT+AGG | 0.411830 | 3_4:+10416666 | None:intergenic |
| CGCTTTAGAGAGTTTCCTCT+CGG | 0.413364 | 3_4:+10416659 | None:intergenic |
| AATCGTGATACCCATCCATT+TGG | 0.415992 | 3_4:+10417411 | None:intergenic |
| TTTGCGTGTTACGACAATCT+TGG | 0.418558 | 3_4:-10417520 | Msa0489740:CDS |
| AGTGCCTCGATCGCAGTTTA+GGG | 0.422326 | 3_4:+10415649 | None:intergenic |
| GTCTTCTGCATTGCATCTAT+GGG | 0.437611 | 3_4:-10415375 | Msa0489740:three_prime_UTR |
| GTATTTCACGCGCCTGCATC+AGG | 0.438304 | 3_4:+10416029 | None:intergenic |
| GCAGAAGATCAGTCCCTTCA+TGG | 0.439287 | 3_4:-10420027 | Msa0489740:CDS |
| AACTTTGTTGGTCGCCTCCT+AGG | 0.450607 | 3_4:-10416683 | Msa0489740:CDS |
| AGATATCTAAGTGAGTTATT+GGG | 0.453132 | 3_4:-10420056 | Msa0489740:CDS |
| ACAACAGCCTTGGTATGAAA+AGG | 0.453437 | 3_4:-10415785 | Msa0489740:CDS |
| GATCGAGGCACTGGCACCAT+AGG | 0.457165 | 3_4:-10415638 | Msa0489740:three_prime_UTR |
| CCTTGTGGACTCAGCCAGCT+TGG | 0.458903 | 3_4:+10416859 | None:intergenic |
| TGTAGGAGGAAATGATGAGA+GGG | 0.463107 | 3_4:-10416132 | Msa0489740:intron |
| AATAGATGCTCGCCTGATGC+AGG | 0.468495 | 3_4:-10416041 | Msa0489740:CDS |
| GCTGCTTCTTGTAGAAATCA+TGG | 0.469593 | 3_4:+10415886 | None:intergenic |
| CGAGCATCTATTATTTCAGC+TGG | 0.474333 | 3_4:+10416052 | None:intergenic |
| GAAATGATGAGAGGGAAGCC+TGG | 0.474448 | 3_4:-10416124 | Msa0489740:CDS |
| TGTCTTCCTCCGGCGCCGGC+AGG | 0.476882 | 3_4:-10420888 | Msa0489740:CDS |
| AGTCCACAAGGTAGCTCGTC+TGG | 0.477212 | 3_4:-10416847 | Msa0489740:CDS |
| AAAACATTCCTCCTGCAGCC+AGG | 0.480776 | 3_4:+10417451 | None:intergenic |
| TCGCCCTTCCACAACAGCCT+TGG | 0.485899 | 3_4:-10415795 | Msa0489740:CDS |
| AAACATTCCTCCTGCAGCCA+GGG | 0.488618 | 3_4:+10417452 | None:intergenic |
| TGCACATAAAACTGACCCTA+TGG | 0.496446 | 3_4:+10415622 | None:intergenic |
| CTAAACTGCGATCGAGGCAC+TGG | 0.497181 | 3_4:-10415647 | Msa0489740:three_prime_UTR |
| CGTGAACTTGCAATGATCAA+TGG | 0.500876 | 3_4:-10415858 | Msa0489740:CDS |
| CGACTGCCGTGTCTTGATCA+GGG | 0.502241 | 3_4:-10416621 | Msa0489740:CDS |
| GTGAGGAAGCACGGCCATGA+AGG | 0.505775 | 3_4:+10420013 | None:intergenic |
| TAGCACATAGTACAGTATAA+TGG | 0.507029 | 3_4:-10415571 | Msa0489740:three_prime_UTR |
| ATGAAAAGGGCCAAAACAAG+GGG | 0.510903 | 3_4:-10415771 | Msa0489740:CDS |
| CATACCAAGGCTGTTGTGGA+AGG | 0.512162 | 3_4:+10415791 | None:intergenic |
| TGAAGCAGGTGAACGAAGAC+CGG | 0.518044 | 3_4:+10420819 | None:intergenic |
| AGCCATGTACCTGCCGGCGC+CGG | 0.519420 | 3_4:+10420879 | None:intergenic |
| CTGCTTCTTGTAGAAATCAT+GGG | 0.521092 | 3_4:+10415887 | None:intergenic |
| TTTACATTCAGGTTTAAAGA+TGG | 0.521418 | 3_4:-10415594 | Msa0489740:three_prime_UTR |
| GGGCGAAACAGAACCAGACA+TGG | 0.521700 | 3_4:+10415812 | None:intergenic |
| CAGTCACTCCCTCATCTCTC+CGG | 0.521883 | 3_4:-10420838 | Msa0489740:CDS |
| ACCTCTCCATATTCTGGTTG+AGG | 0.527638 | 3_4:-10416083 | Msa0489740:CDS |
| AAGGGAGGTCTTGATCCAAA+TGG | 0.528987 | 3_4:-10417426 | Msa0489740:CDS |
| CAACAGCCTTGGTATGAAAA+GGG | 0.534662 | 3_4:-10415784 | Msa0489740:CDS |
| CATGTACCTGCCGGCGCCGG+AGG | 0.539362 | 3_4:+10420882 | None:intergenic |
| GTAGCATTAAAGATGCAGCC+AGG | 0.547742 | 3_4:-10416592 | Msa0489740:CDS |
| GGACTCAGCCAGCTTGGTGT+TGG | 0.550808 | 3_4:+10416865 | None:intergenic |
| AAATACTCGAAGATTTGCTC+AGG | 0.552789 | 3_4:-10416012 | Msa0489740:CDS |
| TGAGGAAGCACGGCCATGAA+GGG | 0.553302 | 3_4:+10420014 | None:intergenic |
| ATCGAGGCACTGGCACCATA+GGG | 0.555088 | 3_4:-10415637 | Msa0489740:three_prime_UTR |
| GGAGAGAGAGTGTGTGTGTG+TGG | 0.555579 | 3_4:+10420949 | None:intergenic |
| GAGGTCTTGATCCAAATGGA+TGG | 0.557184 | 3_4:-10417422 | Msa0489740:CDS |
| AACGAAGACCGGAGAGATGA+GGG | 0.558422 | 3_4:+10420830 | None:intergenic |
| CAGCCAGCTTGGTGTTGGTG+AGG | 0.559629 | 3_4:+10416870 | None:intergenic |
| AAATGATGAGAGGGAAGCCT+GGG | 0.563285 | 3_4:-10416123 | Msa0489740:CDS |
| TCATTCAAATGCTCATACCC+AGG | 0.563836 | 3_4:+10416106 | None:intergenic |
| GTATGAAAAGGGCCAAAACA+AGG | 0.564066 | 3_4:-10415773 | Msa0489740:CDS |
| CGTGTCTTGATCAGGGGTCG+CGG | 0.565990 | 3_4:-10416614 | Msa0489740:CDS |
| GAACGAAGACCGGAGAGATG+AGG | 0.570250 | 3_4:+10420829 | None:intergenic |
| AACATTCCTCCTGCAGCCAG+GGG | 0.570594 | 3_4:+10417453 | None:intergenic |
| ATGATGTCTTCCTCCGGCGC+CGG | 0.571284 | 3_4:-10420892 | Msa0489740:CDS |
| AGTCCTCACCAACACCAAGC+TGG | 0.572688 | 3_4:-10416873 | Msa0489740:CDS |
| AAAGCATTTACCATTGTCAC+AGG | 0.572769 | 3_4:-10415690 | Msa0489740:three_prime_UTR |
| CGGGAAAGCCATGTACCTGC+CGG | 0.573722 | 3_4:+10420873 | None:intergenic |
| TACATTAGGAAATGAATCCA+CGG | 0.578693 | 3_4:+10416789 | None:intergenic |
| GCTTTAGAGAGTTTCCTCTC+GGG | 0.579294 | 3_4:+10416660 | None:intergenic |
| AGTTTCCTCTCGGGCCTAGG+AGG | 0.581527 | 3_4:+10416669 | None:intergenic |
| GGTCAAAGTGGGCTTGAACA+TGG | 0.582190 | 3_4:-10417480 | Msa0489740:CDS |
| AATGGCACTCTTCGCGAGGA+GGG | 0.583366 | 3_4:-10415840 | Msa0489740:CDS |
| TCAGAGATGAGAGATGAAGC+AGG | 0.585453 | 3_4:+10420805 | None:intergenic |
| TGATCGATGATGTCTTCCTC+CGG | 0.588049 | 3_4:-10420898 | Msa0489740:exon |
| GTGACTGTGATGGTGACGGC+GGG | 0.590116 | 3_4:+10420854 | None:intergenic |
| ATACCAAGGCTGTTGTGGAA+GGG | 0.592784 | 3_4:+10415792 | None:intergenic |
| TGCTATCGATTGTTAAACCA+AGG | 0.593048 | 3_4:-10419990 | Msa0489740:intron |
| CCAAGCTGGCTGAGTCCACA+AGG | 0.593852 | 3_4:-10416859 | Msa0489740:CDS |
| GACAGCATCACCTGTGACAA+TGG | 0.594522 | 3_4:+10415680 | None:intergenic |
| CGAAGATTTGCTCAGGCCTG+TGG | 0.598724 | 3_4:-10416005 | Msa0489740:intron |
| GGCGAAACAGAACCAGACAT+GGG | 0.602014 | 3_4:+10415813 | None:intergenic |
| TCGATAGCAGTGAGGAAGCA+CGG | 0.602082 | 3_4:+10420004 | None:intergenic |
| AGGTCTTGATCCAAATGGAT+GGG | 0.609971 | 3_4:-10417421 | Msa0489740:CDS |
| TATGAAAAGGGCCAAAACAA+GGG | 0.613732 | 3_4:-10415772 | Msa0489740:CDS |
| ACATTAGGAAATGAATCCAC+GGG | 0.613854 | 3_4:+10416790 | None:intergenic |
| GACTGCCGTGTCTTGATCAG+GGG | 0.614839 | 3_4:-10416620 | Msa0489740:CDS |
| CAATGGCACTCTTCGCGAGG+AGG | 0.617298 | 3_4:-10415841 | Msa0489740:CDS |
| ACAAATTCACCAAACTCAAG+CGG | 0.621388 | 3_4:+10415547 | None:intergenic |
| TTGTAGGAGGAAATGATGAG+AGG | 0.621425 | 3_4:-10416133 | Msa0489740:intron |
| CGCGACCCCTGATCAAGACA+CGG | 0.621644 | 3_4:+10416615 | None:intergenic |
| GATCAATGGCACTCTTCGCG+AGG | 0.638276 | 3_4:-10415844 | Msa0489740:CDS |
| AGACCAGACGAGCTACCTTG+TGG | 0.640570 | 3_4:+10416844 | None:intergenic |
| AATGCCCTAAACTGCGATCG+AGG | 0.641368 | 3_4:-10415653 | Msa0489740:three_prime_UTR |
| TAGCATTAAAGATGCAGCCA+GGG | 0.650076 | 3_4:-10416591 | Msa0489740:intron |
| GCGAAACAGAACCAGACATG+GGG | 0.654874 | 3_4:+10415814 | None:intergenic |
| AGTGACTGTGATGGTGACGG+CGG | 0.659124 | 3_4:+10420853 | None:intergenic |
| GGTGAGGACTGTATCAGACT+TGG | 0.662412 | 3_4:+10416886 | None:intergenic |
| CCTGATCAAGACACGGCAGT+CGG | 0.666825 | 3_4:+10416622 | None:intergenic |
| TAAGTGAGTTATTGGGAGAG+CGG | 0.667063 | 3_4:-10420049 | Msa0489740:CDS |
| TGCGTGTTACGACAATCTTG+GGG | 0.672107 | 3_4:-10417518 | Msa0489740:CDS |
| GCCTCAACCAGAATATGGAG+AGG | 0.680032 | 3_4:+10416082 | None:intergenic |
| GGTCGCCTCCTAGGCCCGAG+AGG | 0.680828 | 3_4:-10416674 | Msa0489740:CDS |
| GGGAGTGACTGTGATGGTGA+CGG | 0.691608 | 3_4:+10420850 | None:intergenic |
| GAAGACAATATATACAACGC+GGG | 0.697199 | 3_4:+10415392 | None:intergenic |
| ACATTCCTCCTGCAGCCAGG+GGG | 0.703012 | 3_4:+10417454 | None:intergenic |
| AATCAGAGTGGATATACCCG+TGG | 0.703654 | 3_4:-10416806 | Msa0489740:CDS |
| AGATGAGGGAGTGACTGTGA+TGG | 0.703735 | 3_4:+10420844 | None:intergenic |
| CGAAACAGAACCAGACATGG+GGG | 0.705906 | 3_4:+10415815 | None:intergenic |
| TGAAAAGGGCCAAAACAAGG+GGG | 0.724143 | 3_4:-10415770 | Msa0489740:CDS |
| TTTAACAATCGATAGCAGTG+AGG | 0.729649 | 3_4:+10419996 | None:intergenic |
| AGAAGACAATATATACAACG+CGG | 0.773314 | 3_4:+10415391 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATTCTTAAATTTTTCTA+TGG | - | chr3_4:10415647-10415666 | Msa0489740:three_prime_UTR | 10.0% |
| !!! | TTGAAGTATTTTATTTTTTT+TGG | - | chr3_4:10416008-10416027 | Msa0489740:CDS | 10.0% |
| !!! | TTTTTTCCTTTTTATTTTTT+CGG | + | chr3_4:10416932-10416951 | None:intergenic | 10.0% |
| !! | CTTATATGTATTAATTATTA+CGG | + | chr3_4:10417124-10417143 | None:intergenic | 10.0% |
| !!! | TAATAATCTTTTATTCATAA+CGG | - | chr3_4:10417190-10417209 | Msa0489740:intron | 10.0% |
| !! | AACAATTATAATATAGTAAA+TGG | + | chr3_4:10418313-10418332 | None:intergenic | 10.0% |
| !!! | ATGTTTTATAACTAAATTTT+GGG | - | chr3_4:10418494-10418513 | Msa0489740:intron | 10.0% |
| !!! | TTTGTTTTTTTTTTTTTTGT+TGG | - | chr3_4:10420785-10420804 | Msa0489740:intron | 10.0% |
| !! | ATCATACAAAAATATGAAAA+GGG | + | chr3_4:10415567-10415586 | None:intergenic | 15.0% |
| !! | TTAAGAATTAACAATAACAA+AGG | + | chr3_4:10415638-10415657 | None:intergenic | 15.0% |
| !!! | AAATTTTTTTGTTTGATTCA+AGG | - | chr3_4:10416464-10416483 | Msa0489740:intron | 15.0% |
| !!! | TTTTGTATTTCAAATGTTAA+AGG | - | chr3_4:10416559-10416578 | Msa0489740:intron | 15.0% |
| !! | AATATAATTATACAGTTCAA+TGG | + | chr3_4:10416611-10416630 | None:intergenic | 15.0% |
| !! | AAATAAGTAATAACAATGTA+TGG | - | chr3_4:10416638-10416657 | Msa0489740:CDS | 15.0% |
| !! | GAAAAAATAAAAAGGAAAAA+AGG | - | chr3_4:10416931-10416950 | Msa0489740:intron | 15.0% |
| !! | TGTTAATATCTTATATGTTA+AGG | - | chr3_4:10418225-10418244 | Msa0489740:intron | 15.0% |
| !!! | GATGTTTTATAACTAAATTT+TGG | - | chr3_4:10418493-10418512 | Msa0489740:intron | 15.0% |
| !! | TATCACTTATAATTATTCTA+AGG | - | chr3_4:10419909-10419928 | Msa0489740:intron | 15.0% |
| !! | ATCACTTATAATTATTCTAA+GGG | - | chr3_4:10419910-10419929 | Msa0489740:intron | 15.0% |
| !!! | TCTATATACATTTAGAATAA+GGG | + | chr3_4:10420113-10420132 | None:intergenic | 15.0% |
| !!! | ATCTATATACATTTAGAATA+AGG | + | chr3_4:10420114-10420133 | None:intergenic | 15.0% |
| !! | AAATGTATATAGATTTCATT+TGG | - | chr3_4:10420120-10420139 | Msa0489740:intron | 15.0% |
| !!! | TTTTTTTTTTTTTGTTGGTT+AGG | - | chr3_4:10420790-10420809 | Msa0489740:intron | 15.0% |
| !! | GATCATACAAAAATATGAAA+AGG | + | chr3_4:10415568-10415587 | None:intergenic | 20.0% |
| !!! | TAAATTTTTCTATGGTCAAA+TGG | - | chr3_4:10415655-10415674 | Msa0489740:three_prime_UTR | 20.0% |
| !!! | AAATTTTTCTATGGTCAAAT+GGG | - | chr3_4:10415656-10415675 | Msa0489740:three_prime_UTR | 20.0% |
| !!! | TTATTTCATGATCTAAGTTT+TGG | - | chr3_4:10415818-10415837 | Msa0489740:CDS | 20.0% |
| !! | TAATTATGTCTATATTACAG+TGG | - | chr3_4:10415931-10415950 | Msa0489740:intron | 20.0% |
| !!! | AGTGGATTTTTTTGTATAAA+TGG | - | chr3_4:10415949-10415968 | Msa0489740:intron | 20.0% |
| !!! | AGACTTCTATATTTTTAGTT+GGG | + | chr3_4:10416861-10416880 | None:intergenic | 20.0% |
| !!! | TAGACTTCTATATTTTTAGT+TGG | + | chr3_4:10416862-10416881 | None:intergenic | 20.0% |
| !! | TTATGAAATAAGAACACAAA+AGG | - | chr3_4:10417276-10417295 | Msa0489740:intron | 20.0% |
| !! | GATTAAAAAAGAAAAACACT+TGG | - | chr3_4:10417366-10417385 | Msa0489740:intron | 20.0% |
| !!! | TTTGTAACAGATTTTCTTAA+AGG | + | chr3_4:10417660-10417679 | None:intergenic | 20.0% |
| !! | ACACATTAAATTAGAATAGA+AGG | - | chr3_4:10418007-10418026 | Msa0489740:intron | 20.0% |
| !! | AAAAAACCTATTGACATTTA+AGG | + | chr3_4:10418470-10418489 | None:intergenic | 20.0% |
| !!! | CTATAAGTTAAAGCTTTTTA+TGG | + | chr3_4:10418668-10418687 | None:intergenic | 20.0% |
| !! | ATAAGATAGTTAACTCATTT+CGG | + | chr3_4:10419105-10419124 | None:intergenic | 20.0% |
| !! | AAAAAATCTAGTGTTCATTA+GGG | + | chr3_4:10419569-10419588 | None:intergenic | 20.0% |
| !! | AAAAAAATCTAGTGTTCATT+AGG | + | chr3_4:10419570-10419589 | None:intergenic | 20.0% |
| !! | TATCTATTAGATTCTTATGT+TGG | + | chr3_4:10419594-10419613 | None:intergenic | 20.0% |
| !!! | TAATATGTTAATTTTTACCC+TGG | + | chr3_4:10419743-10419762 | None:intergenic | 20.0% |
| !!! | ACAGTAAAGTAATTTTATCT+CGG | + | chr3_4:10419787-10419806 | None:intergenic | 20.0% |
| !! | ACAAGTTATGAATCTAAAAA+AGG | - | chr3_4:10419958-10419977 | Msa0489740:intron | 20.0% |
| !! | CAAAATTAAGTTTCTACATT+TGG | - | chr3_4:10420049-10420068 | Msa0489740:CDS | 20.0% |
| !!! | TGGTTTTACAATATAATGTA+TGG | - | chr3_4:10420893-10420912 | Msa0489740:CDS | 20.0% |
| ! | AATTCACATCAATATGATGA+TGG | + | chr3_4:10415790-10415809 | None:intergenic | 25.0% |
| ! | TGAAATTACAGCAAAGAAAA+GGG | + | chr3_4:10416096-10416115 | None:intergenic | 25.0% |
| ! | TTAGATATCTGCAAAACAAA+AGG | + | chr3_4:10416248-10416267 | None:intergenic | 25.0% |
| ! | AGATATCTAAGTGAGTTATT+GGG | - | chr3_4:10416258-10416277 | Msa0489740:intron | 25.0% |
| ! | ATACAAACAAGAAAAACACA+GGG | + | chr3_4:10416392-10416411 | None:intergenic | 25.0% |
| ! | TTTGATTCAAGGAAGTTTAT+GGG | - | chr3_4:10416475-10416494 | Msa0489740:intron | 25.0% |
| !! | GAGTAAGTCAAACTAAATTT+TGG | - | chr3_4:10416744-10416763 | Msa0489740:intron | 25.0% |
| ! | AAAAAATCGAGTTCCTATTT+AGG | - | chr3_4:10416780-10416799 | Msa0489740:intron | 25.0% |
| ! | GATGAGTAAAAGATTGTTAA+TGG | - | chr3_4:10416810-10416829 | Msa0489740:CDS | 25.0% |
| ! | TGCTAACCGAAAAAATAAAA+AGG | - | chr3_4:10416923-10416942 | Msa0489740:intron | 25.0% |
| ! | GATTACTTTCTCAAAATGTA+TGG | - | chr3_4:10417084-10417103 | Msa0489740:intron | 25.0% |
| ! | AAAAAGAGAAAAACCAAAGA+CGG | - | chr3_4:10417300-10417319 | Msa0489740:intron | 25.0% |
| ! | AATTCTATTGAGCCTTAAAT+GGG | + | chr3_4:10417709-10417728 | None:intergenic | 25.0% |
| ! | AAATTCTATTGAGCCTTAAA+TGG | + | chr3_4:10417710-10417729 | None:intergenic | 25.0% |
| ! | GAAAATGATCAGAAAGTAAA+GGG | + | chr3_4:10418077-10418096 | None:intergenic | 25.0% |
| ! | AGAAAATGATCAGAAAGTAA+AGG | + | chr3_4:10418078-10418097 | None:intergenic | 25.0% |
| ! | TTAAACTGATTGGATCATAT+GGG | - | chr3_4:10418134-10418153 | Msa0489740:intron | 25.0% |
| ! | AACACATCACTCAATTAAAA+AGG | + | chr3_4:10418200-10418219 | None:intergenic | 25.0% |
| !!! | TTTTTGTTATTGTAATGGTG+TGG | - | chr3_4:10418401-10418420 | Msa0489740:intron | 25.0% |
| !!! | AACTAAATTTTGGGTTATCT+TGG | - | chr3_4:10418503-10418522 | Msa0489740:intron | 25.0% |
| !! | TAAGAAAATGCTGACATTTT+TGG | - | chr3_4:10418762-10418781 | Msa0489740:intron | 25.0% |
| ! | TGGAAATGAAGTTATGTTAA+TGG | + | chr3_4:10418952-10418971 | None:intergenic | 25.0% |
| !!! | TTCTAAAGTACAGAATTAGA+TGG | + | chr3_4:10418972-10418991 | None:intergenic | 25.0% |
| !!! | GTAGTTCTATATTTTTGTAC+AGG | - | chr3_4:10419049-10419068 | Msa0489740:intron | 25.0% |
| ! | TTAACTATCTTATACCATCA+TGG | - | chr3_4:10419112-10419131 | Msa0489740:intron | 25.0% |
| !! | AACTTGCATTTTTGATGTTA+TGG | - | chr3_4:10419213-10419232 | Msa0489740:intron | 25.0% |
| ! | AGATATGATTGTCTATTTAC+CGG | + | chr3_4:10419370-10419389 | None:intergenic | 25.0% |
| ! | ATTATAAGTGATAGATCTCT+AGG | + | chr3_4:10419902-10419921 | None:intergenic | 25.0% |
| !!! | CGAATTTTGATCATATTTGT+AGG | - | chr3_4:10420165-10420184 | Msa0489740:intron | 25.0% |
| !!! | ATTTTGATCATATTTGTAGG+AGG | - | chr3_4:10420168-10420187 | Msa0489740:intron | 25.0% |
| ! | GAATTATTGTCTTATCTTTC+AGG | - | chr3_4:10420398-10420417 | Msa0489740:intron | 25.0% |
| !! | TTTACATTCAGGTTTAAAGA+TGG | - | chr3_4:10420720-10420739 | Msa0489740:intron | 25.0% |
| ! | TCTGAAATCAGAATCATCAT+TGG | + | chr3_4:10415864-10415883 | None:intergenic | 30.0% |
| GAGCTTATGAAATATCATGA+TGG | - | chr3_4:10415882-10415901 | Msa0489740:CDS | 30.0% | |
| TATAAATGGCTTGATCTTTG+TGG | - | chr3_4:10415963-10415982 | Msa0489740:intron | 30.0% | |
| AAATGAGTTTGTGGATGAAT+TGG | - | chr3_4:10416036-10416055 | Msa0489740:CDS | 30.0% | |
| CTGAAATTACAGCAAAGAAA+AGG | + | chr3_4:10416097-10416116 | None:intergenic | 30.0% | |
| CGTTTGATATTTGCGAATAA+CGG | - | chr3_4:10416185-10416204 | Msa0489740:intron | 30.0% | |
| CAGATATCTAAGTGAGTTAT+TGG | - | chr3_4:10416257-10416276 | Msa0489740:intron | 30.0% | |
| TACAAACAAGAAAAACACAG+GGG | + | chr3_4:10416391-10416410 | None:intergenic | 30.0% | |
| CATACAAACAAGAAAAACAC+AGG | + | chr3_4:10416393-10416412 | None:intergenic | 30.0% | |
| GTTTGATTCAAGGAAGTTTA+TGG | - | chr3_4:10416474-10416493 | Msa0489740:intron | 30.0% | |
| TTCATTCGTTTATTGACCAA+GGG | - | chr3_4:10416661-10416680 | Msa0489740:CDS | 30.0% | |
| ! | GGTTTATCTGTTTTGTGAAT+TGG | - | chr3_4:10416703-10416722 | Msa0489740:intron | 30.0% |
| TTACTTCTTGCGGATAAAAT+GGG | + | chr3_4:10416994-10417013 | None:intergenic | 30.0% | |
| TTTACTTCTTGCGGATAAAA+TGG | + | chr3_4:10416995-10417014 | None:intergenic | 30.0% | |
| ATTAATTATTACGGAGAGTC+AGG | + | chr3_4:10417115-10417134 | None:intergenic | 30.0% | |
| ! | CTTGGAATCTTTAGTTTCAT+TGG | - | chr3_4:10417384-10417403 | Msa0489740:intron | 30.0% |
| GTTTGTTTGTCATCTCTTAT+TGG | + | chr3_4:10417530-10417549 | None:intergenic | 30.0% | |
| TGGTCAGGAATTAAGATAAT+AGG | + | chr3_4:10417683-10417702 | None:intergenic | 30.0% | |
| ATTCTATTGAGCCTTAAATG+GGG | + | chr3_4:10417708-10417727 | None:intergenic | 30.0% | |
| CTTAATCGTAGTTAAAAGTC+AGG | - | chr3_4:10417971-10417990 | Msa0489740:intron | 30.0% | |
| AAAAGTCAGGTATTCATCTA+TGG | - | chr3_4:10417984-10418003 | Msa0489740:intron | 30.0% | |
| ! | AGTTTAAGTTTGCAAGTTGA+GGG | + | chr3_4:10418121-10418140 | None:intergenic | 30.0% |
| ACTTGCAAACTTAAACTGAT+TGG | - | chr3_4:10418124-10418143 | Msa0489740:intron | 30.0% | |
| CTTAAACTGATTGGATCATA+TGG | - | chr3_4:10418133-10418152 | Msa0489740:intron | 30.0% | |
| ! | TCTTCCTTCTGAAAAAGTAA+TGG | - | chr3_4:10418335-10418354 | Msa0489740:intron | 30.0% |
| !!! | CATTCCATTACTTTTTCAGA+AGG | + | chr3_4:10418342-10418361 | None:intergenic | 30.0% |
| !!! | GCTGCTTTTTGTTATTGTAA+TGG | - | chr3_4:10418396-10418415 | Msa0489740:intron | 30.0% |
| GAAAAAATACATGCAGTCAA+GGG | + | chr3_4:10418627-10418646 | None:intergenic | 30.0% | |
| AGAAAAAATACATGCAGTCA+AGG | + | chr3_4:10418628-10418647 | None:intergenic | 30.0% | |
| ACTCATGAAATTAATTCGAC+TGG | - | chr3_4:10419024-10419043 | Msa0489740:intron | 30.0% | |
| ATCCTTTCATTGACATAGTT+AGG | - | chr3_4:10419186-10419205 | Msa0489740:intron | 30.0% | |
| ATCCTAACTATGTCAATGAA+AGG | + | chr3_4:10419191-10419210 | None:intergenic | 30.0% | |
| TGAATTTACTACTGTATCAG+AGG | + | chr3_4:10419333-10419352 | None:intergenic | 30.0% | |
| TGTTAAAAAGACAATCAGAG+TGG | - | chr3_4:10419496-10419515 | Msa0489740:intron | 30.0% | |
| TACATTAGGAAATGAATCCA+CGG | + | chr3_4:10419528-10419547 | None:intergenic | 30.0% | |
| TGGATTCATTTCCTAATGTA+TGG | - | chr3_4:10419528-10419547 | Msa0489740:intron | 30.0% | |
| ATTCATTTCCTAATGTATGG+AGG | - | chr3_4:10419531-10419550 | Msa0489740:intron | 30.0% | |
| ! | TGATTGCAGTTTAACTTTGT+TGG | - | chr3_4:10419619-10419638 | Msa0489740:intron | 30.0% |
| GGAAAATATTCATCAGATGA+TGG | + | chr3_4:10419869-10419888 | None:intergenic | 30.0% | |
| AGATCTCTAGGTGAAATAAA+TGG | + | chr3_4:10419890-10419909 | None:intergenic | 30.0% | |
| ATGAGATTAGACAACTTGAT+AGG | - | chr3_4:10420352-10420371 | Msa0489740:intron | 30.0% | |
| TGAGATTAGACAACTTGATA+GGG | - | chr3_4:10420353-10420372 | Msa0489740:intron | 30.0% | |
| TAGCACATAGTACAGTATAA+TGG | - | chr3_4:10420743-10420762 | Msa0489740:intron | 30.0% | |
| !! | TGCATTTGACAGTTTTGATA+TGG | - | chr3_4:10420873-10420892 | Msa0489740:CDS | 30.0% |
| AGAAGACAATATATACAACG+CGG | + | chr3_4:10420926-10420945 | None:intergenic | 30.0% | |
| !! | TTTCTGTTGCTTGCTATAGT+TGG | - | chr3_4:10415693-10415712 | Msa0489740:three_prime_UTR | 35.0% |
| AATCATCATTGGCATGAACA+AGG | + | chr3_4:10415853-10415872 | None:intergenic | 35.0% | |
| TTGGTTGAGAAATGAGTTTG+TGG | - | chr3_4:10416027-10416046 | Msa0489740:CDS | 35.0% | |
| ! | TGATATTTGCGAATAACGGA+TGG | - | chr3_4:10416189-10416208 | Msa0489740:intron | 35.0% |
| TTTAACAATCGATAGCAGTG+AGG | + | chr3_4:10416321-10416340 | None:intergenic | 35.0% | |
| ! | TGCTATCGATTGTTAAACCA+AGG | - | chr3_4:10416324-10416343 | Msa0489740:intron | 35.0% |
| TCGATTGTTAAACCAAGGTT+AGG | - | chr3_4:10416329-10416348 | Msa0489740:intron | 35.0% | |
| ! | TCAATTTGCTTATAGAGCAG+AGG | + | chr3_4:10416509-10416528 | None:intergenic | 35.0% |
| GTTCATTCGTTTATTGACCA+AGG | - | chr3_4:10416660-10416679 | Msa0489740:CDS | 35.0% | |
| GTTTATTGACCAAGGGATTA+TGG | - | chr3_4:10416668-10416687 | Msa0489740:CDS | 35.0% | |
| ! | ATCGAGTTCCTATTTAGGAT+CGG | - | chr3_4:10416785-10416804 | Msa0489740:intron | 35.0% |
| ATGATGTAATCAACGTTACC+TGG | - | chr3_4:10416899-10416918 | Msa0489740:intron | 35.0% | |
| TGATGTAATCAACGTTACCT+GGG | - | chr3_4:10416900-10416919 | Msa0489740:intron | 35.0% | |
| TACTTCTTGCGGATAAAATG+GGG | + | chr3_4:10416993-10417012 | None:intergenic | 35.0% | |
| !! | TAATCAGATCGCTGATTTCT+TGG | + | chr3_4:10417069-10417088 | None:intergenic | 35.0% |
| ! | TCAATCAGTGTTATCGATTG+TGG | - | chr3_4:10417738-10417757 | Msa0489740:intron | 35.0% |
| ! | GGTGTTTTATGGAGGATTTT+GGG | + | chr3_4:10417775-10417794 | None:intergenic | 35.0% |
| ! | TGGTGTTTTATGGAGGATTT+TGG | + | chr3_4:10417776-10417795 | None:intergenic | 35.0% |
| AAAATCCTCCATAAAACACC+AGG | - | chr3_4:10417775-10417794 | Msa0489740:intron | 35.0% | |
| AAATCCTCCATAAAACACCA+GGG | - | chr3_4:10417776-10417795 | Msa0489740:intron | 35.0% | |
| ! | CAAAGTGTTTGTCATGTCTA+TGG | + | chr3_4:10417862-10417881 | None:intergenic | 35.0% |
| CATAGACATGACAAACACTT+TGG | - | chr3_4:10417860-10417879 | Msa0489740:intron | 35.0% | |
| GAGGATAAAGGATCAAGTAT+TGG | + | chr3_4:10418052-10418071 | None:intergenic | 35.0% | |
| AAGTAAAGGGAAGAGGATAA+AGG | + | chr3_4:10418064-10418083 | None:intergenic | 35.0% | |
| ! | CAGTTTAAGTTTGCAAGTTG+AGG | + | chr3_4:10418122-10418141 | None:intergenic | 35.0% |
| ! | TGGAATGATAATTTTCCTGC+CGG | - | chr3_4:10418355-10418374 | Msa0489740:intron | 35.0% |
| AAAGCAGCAATCACATAAAC+CGG | + | chr3_4:10418384-10418403 | None:intergenic | 35.0% | |
| GCAAGTCCTTAAATGTCAAT+AGG | - | chr3_4:10418461-10418480 | Msa0489740:intron | 35.0% | |
| ATCAGTGAACCATTGAAACA+GGG | + | chr3_4:10418533-10418552 | None:intergenic | 35.0% | |
| GTTCACTGATCTGATTTCTT+GGG | - | chr3_4:10418543-10418562 | Msa0489740:intron | 35.0% | |
| !!! | CATCAGTTTTAGGTCAAAGT+GGG | - | chr3_4:10418823-10418842 | Msa0489740:intron | 35.0% |
| CACGATTTCAATCAGAAGTA+CGG | - | chr3_4:10418919-10418938 | Msa0489740:intron | 35.0% | |
| TCAGGATGTCAGTAAATGAT+GGG | + | chr3_4:10419167-10419186 | None:intergenic | 35.0% | |
| ATCAGGATGTCAGTAAATGA+TGG | + | chr3_4:10419168-10419187 | None:intergenic | 35.0% | |
| ACTATGTCAATGAAAGGATC+AGG | + | chr3_4:10419185-10419204 | None:intergenic | 35.0% | |
| ACATTAGGAAATGAATCCAC+GGG | + | chr3_4:10419527-10419546 | None:intergenic | 35.0% | |
| ! | ATTCATAACTTGTGCCCTTA+GGG | + | chr3_4:10419951-10419970 | None:intergenic | 35.0% |
| AATTCACAACAACATACCAC+AGG | + | chr3_4:10420328-10420347 | None:intergenic | 35.0% | |
| CTGCTTCTTGTAGAAATCAT+GGG | + | chr3_4:10420430-10420449 | None:intergenic | 35.0% | |
| TATGAAAAGGGCCAAAACAA+GGG | - | chr3_4:10420542-10420561 | Msa0489740:intron | 35.0% | |
| ! | AAAGCATTTACCATTGTCAC+AGG | - | chr3_4:10420624-10420643 | Msa0489740:intron | 35.0% |
| ACAAATTCACCAAACTCAAG+CGG | + | chr3_4:10420770-10420789 | None:intergenic | 35.0% | |
| !! | TTTTTGTTGGTTAGGCTGTT+TGG | - | chr3_4:10420798-10420817 | Msa0489740:CDS | 35.0% |
| GAAGACAATATATACAACGC+GGG | + | chr3_4:10420925-10420944 | None:intergenic | 35.0% | |
| ! | GATGTGCTATTCTCATTGCA+TGG | - | chr3_4:10416216-10416235 | Msa0489740:intron | 40.0% |
| TAAGTGAGTTATTGGGAGAG+CGG | - | chr3_4:10416265-10416284 | Msa0489740:intron | 40.0% | |
| TTTGACAGTGAACCTAACCT+TGG | + | chr3_4:10416344-10416363 | None:intergenic | 40.0% | |
| TAGGTTCACTGTCAAAGTAG+TGG | - | chr3_4:10416348-10416367 | Msa0489740:intron | 40.0% | |
| AAACAAGAAAAACACAGGGG+AGG | + | chr3_4:10416388-10416407 | None:intergenic | 40.0% | |
| ! | TCGAGTTCCTATTTAGGATC+GGG | - | chr3_4:10416786-10416805 | Msa0489740:intron | 40.0% |
| TGATCACAACGCAGATCATA+CGG | - | chr3_4:10416835-10416854 | Msa0489740:CDS | 40.0% | |
| !!! | TATTTTTTCGGTTAGCACCC+AGG | + | chr3_4:10416920-10416939 | None:intergenic | 40.0% |
| AATGGGGGTAGTTCATTTAC+AGG | + | chr3_4:10416977-10416996 | None:intergenic | 40.0% | |
| ACTTCTTGCGGATAAAATGG+GGG | + | chr3_4:10416992-10417011 | None:intergenic | 40.0% | |
| GGTAGGACATTTACTTCTTG+CGG | + | chr3_4:10417004-10417023 | None:intergenic | 40.0% | |
| TAATCTCACTTCTCCGTCTT+TGG | + | chr3_4:10417316-10417335 | None:intergenic | 40.0% | |
| AAAGACGGAGAAGTGAGATT+AGG | - | chr3_4:10417315-10417334 | Msa0489740:intron | 40.0% | |
| TGGACAAAGAAACTAGAGAG+TGG | - | chr3_4:10417404-10417423 | Msa0489740:CDS | 40.0% | |
| GGACAAAGAAACTAGAGAGT+GGG | - | chr3_4:10417405-10417424 | Msa0489740:CDS | 40.0% | |
| TGGTTCAGTTACAAACTCAC+AGG | + | chr3_4:10417510-10417529 | None:intergenic | 40.0% | |
| ATTGAGCCTTAAATGGGGTA+TGG | + | chr3_4:10417703-10417722 | None:intergenic | 40.0% | |
| ! | TATGGAGGATTTTGGGCTTT+CGG | + | chr3_4:10417768-10417787 | None:intergenic | 40.0% |
| ! | AGATTTTGTGACAGCTGTCA+TGG | + | chr3_4:10417825-10417844 | None:intergenic | 40.0% |
| AGTGTTTGTCATGTCTATGG+TGG | + | chr3_4:10417859-10417878 | None:intergenic | 40.0% | |
| GATCAGAAAGTAAAGGGAAG+AGG | + | chr3_4:10418071-10418090 | None:intergenic | 40.0% | |
| CTGCTCAATGAAGCAAAAGA+TGG | + | chr3_4:10418271-10418290 | None:intergenic | 40.0% | |
| CTTGGAATACCCTGTTTCAA+TGG | - | chr3_4:10418521-10418540 | Msa0489740:intron | 40.0% | |
| GATCAGTGAACCATTGAAAC+AGG | + | chr3_4:10418534-10418553 | None:intergenic | 40.0% | |
| GGTTCACTGATCTGATTTCT+TGG | - | chr3_4:10418542-10418561 | Msa0489740:intron | 40.0% | |
| ! | GCTTTTTATGGTAGTACTCG+AGG | + | chr3_4:10418656-10418675 | None:intergenic | 40.0% |
| CAAACATCCAAGCTGTCTAT+CGG | - | chr3_4:10418716-10418735 | Msa0489740:intron | 40.0% | |
| TACAAAACCGATAGACAGCT+TGG | + | chr3_4:10418726-10418745 | None:intergenic | 40.0% | |
| TTTGCGTGTTACGACAATCT+TGG | - | chr3_4:10418794-10418813 | Msa0489740:intron | 40.0% | |
| TTGCGTGTTACGACAATCTT+GGG | - | chr3_4:10418795-10418814 | Msa0489740:intron | 40.0% | |
| ! | TTGGGGAATGCATCAGTTTT+AGG | - | chr3_4:10418813-10418832 | Msa0489740:intron | 40.0% |
| !!! | GCATCAGTTTTAGGTCAAAG+TGG | - | chr3_4:10418822-10418841 | Msa0489740:intron | 40.0% |
| AGGTCTTGATCCAAATGGAT+GGG | - | chr3_4:10418893-10418912 | Msa0489740:intron | 40.0% | |
| AATCGTGATACCCATCCATT+TGG | + | chr3_4:10418906-10418925 | None:intergenic | 40.0% | |
| ! | CAGATGCTTTTGAACCATGA+TGG | + | chr3_4:10419129-10419148 | None:intergenic | 40.0% |
| ! | TCAGCTAGTGCAAACCTTTT+TGG | - | chr3_4:10419304-10419323 | Msa0489740:intron | 40.0% |
| ATTCATGTTCATCTGCATGC+CGG | - | chr3_4:10419348-10419367 | Msa0489740:intron | 40.0% | |
| GATGTGATCCTCCATACATT+AGG | + | chr3_4:10419542-10419561 | None:intergenic | 40.0% | |
| TAGCATTAAAGATGCAGCCA+GGG | - | chr3_4:10419723-10419742 | Msa0489740:intron | 40.0% | |
| ! | GATTCATAACTTGTGCCCTT+AGG | + | chr3_4:10419952-10419971 | None:intergenic | 40.0% |
| CTTCTAAACTTGTGCCTTGA+GGG | - | chr3_4:10420072-10420091 | Msa0489740:intron | 40.0% | |
| !! | AATGTTAACTTGTGCCCTCA+AGG | + | chr3_4:10420089-10420108 | None:intergenic | 40.0% |
| TTGTAGGAGGAAATGATGAG+AGG | - | chr3_4:10420181-10420200 | Msa0489740:intron | 40.0% | |
| TGTAGGAGGAAATGATGAGA+GGG | - | chr3_4:10420182-10420201 | Msa0489740:intron | 40.0% | |
| TCATTCAAATGCTCATACCC+AGG | + | chr3_4:10420211-10420230 | None:intergenic | 40.0% | |
| GAATGAACCTCTCCATATTC+TGG | - | chr3_4:10420225-10420244 | Msa0489740:intron | 40.0% | |
| ATTCTGCCTCAACCAGAATA+TGG | + | chr3_4:10420240-10420259 | None:intergenic | 40.0% | |
| CGAGCATCTATTATTTCAGC+TGG | + | chr3_4:10420265-10420284 | None:intergenic | 40.0% | |
| GCTGCTTCTTGTAGAAATCA+TGG | + | chr3_4:10420431-10420450 | None:intergenic | 40.0% | |
| CGTGAACTTGCAATGATCAA+TGG | - | chr3_4:10420456-10420475 | Msa0489740:intron | 40.0% | |
| ! | TTTTCATACCAAGGCTGTTG+TGG | + | chr3_4:10420530-10420549 | None:intergenic | 40.0% |
| ACAACAGCCTTGGTATGAAA+AGG | - | chr3_4:10420529-10420548 | Msa0489740:intron | 40.0% | |
| CAACAGCCTTGGTATGAAAA+GGG | - | chr3_4:10420530-10420549 | Msa0489740:intron | 40.0% | |
| ! | TTTTGGCCCTTTTCATACCA+AGG | + | chr3_4:10420539-10420558 | None:intergenic | 40.0% |
| GTATGAAAAGGGCCAAAACA+AGG | - | chr3_4:10420541-10420560 | Msa0489740:intron | 40.0% | |
| ATGAAAAGGGCCAAAACAAG+GGG | - | chr3_4:10420543-10420562 | Msa0489740:intron | 40.0% | |
| AGGGGGTAAATTCCCTTTAA+AGG | - | chr3_4:10420561-10420580 | Msa0489740:intron | 40.0% | |
| GGGGGTAAATTCCCTTTAAA+GGG | - | chr3_4:10420562-10420581 | Msa0489740:intron | 40.0% | |
| TGCACATAAAACTGACCCTA+TGG | + | chr3_4:10420695-10420714 | None:intergenic | 40.0% | |
| TGTGCAGTGTGTTTACATTC+AGG | - | chr3_4:10420709-10420728 | Msa0489740:intron | 40.0% | |
| TATAATGGTCCGCTTGAGTT+TGG | - | chr3_4:10420758-10420777 | Msa0489740:intron | 40.0% | |
| TGTCTTCTGCATTGCATCTA+TGG | - | chr3_4:10420938-10420957 | Msa0489740:five_prime_UTR | 40.0% | |
| GTCTTCTGCATTGCATCTAT+GGG | - | chr3_4:10420939-10420958 | Msa0489740:five_prime_UTR | 40.0% | |
| GAGAGATTTGTGAGTGAGTG+AGG | + | chr3_4:10415318-10415337 | None:intergenic | 45.0% | |
| !! | TCTCTCTCTGAGATGGCTTT+GGG | + | chr3_4:10415389-10415408 | None:intergenic | 45.0% |
| TGATCGATGATGTCTTCCTC+CGG | - | chr3_4:10415416-10415435 | Msa0489740:three_prime_UTR | 45.0% | |
| TCAGAGATGAGAGATGAAGC+AGG | + | chr3_4:10415512-10415531 | None:intergenic | 45.0% | |
| GGATTATGGCTAGTGAGCAT+TGG | - | chr3_4:10416682-10416701 | Msa0489740:CDS | 45.0% | |
| CTCATCACCCGATCCTAAAT+AGG | + | chr3_4:10416796-10416815 | None:intergenic | 45.0% | |
| AGAAGTAAATGTCCTACCCC+TGG | - | chr3_4:10417006-10417025 | Msa0489740:intron | 45.0% | |
| !! | CGCTGATTTCTTGGCAAACA+GGG | + | chr3_4:10417060-10417079 | None:intergenic | 45.0% |
| !! | TCGCTGATTTCTTGGCAAAC+AGG | + | chr3_4:10417061-10417080 | None:intergenic | 45.0% |
| AAACTAGAGAGTGGGAACAG+AGG | - | chr3_4:10417413-10417432 | Msa0489740:CDS | 45.0% | |
| TCCTGACCATACCCCATTTA+AGG | - | chr3_4:10417694-10417713 | Msa0489740:intron | 45.0% | |
| ! | TCAGTGTTATCGATTGTGGC+TGG | - | chr3_4:10417742-10417761 | Msa0489740:intron | 45.0% |
| CACTGCCATCCTTCACAAAT+TGG | - | chr3_4:10417799-10417818 | Msa0489740:intron | 45.0% | |
| CATGGCCAATTTGTGAAGGA+TGG | + | chr3_4:10417807-10417826 | None:intergenic | 45.0% | |
| CTGTCATGGCCAATTTGTGA+AGG | + | chr3_4:10417811-10417830 | None:intergenic | 45.0% | |
| ATCGACCGAGTAAGATTGAG+CGG | - | chr3_4:10417916-10417935 | Msa0489740:intron | 45.0% | |
| ! | AGTTTGCAAGTTGAGGGAGA+GGG | + | chr3_4:10418115-10418134 | None:intergenic | 45.0% |
| ! | AAGTTTGCAAGTTGAGGGAG+AGG | + | chr3_4:10418116-10418135 | None:intergenic | 45.0% |
| TGCGTGTTACGACAATCTTG+GGG | - | chr3_4:10418796-10418815 | Msa0489740:intron | 45.0% | |
| ! | TGCAGGAGGAATGTTTTCGA+AGG | - | chr3_4:10418869-10418888 | Msa0489740:intron | 45.0% |
| ! | GCAGGAGGAATGTTTTCGAA+GGG | - | chr3_4:10418870-10418889 | Msa0489740:intron | 45.0% |
| AAGGGAGGTCTTGATCCAAA+TGG | - | chr3_4:10418888-10418907 | Msa0489740:intron | 45.0% | |
| GAGGTCTTGATCCAAATGGA+TGG | - | chr3_4:10418892-10418911 | Msa0489740:intron | 45.0% | |
| ! | GCTAGTGCAAACCTTTTTGG+TGG | - | chr3_4:10419307-10419326 | Msa0489740:intron | 45.0% |
| TGTATCAGAGGCCACCAAAA+AGG | + | chr3_4:10419321-10419340 | None:intergenic | 45.0% | |
| AATCAGAGTGGATATACCCG+TGG | - | chr3_4:10419508-10419527 | Msa0489740:intron | 45.0% | |
| !! | GCTTTAGAGAGTTTCCTCTC+GGG | + | chr3_4:10419657-10419676 | None:intergenic | 45.0% |
| !! | CGCTTTAGAGAGTTTCCTCT+CGG | + | chr3_4:10419658-10419677 | None:intergenic | 45.0% |
| GTAGCATTAAAGATGCAGCC+AGG | - | chr3_4:10419722-10419741 | Msa0489740:intron | 45.0% | |
| !! | TCGTGTTAACTTGTGCCCTA+AGG | - | chr3_4:10419933-10419952 | Msa0489740:intron | 45.0% |
| !! | CGTGTTAACTTGTGCCCTAA+GGG | - | chr3_4:10419934-10419953 | Msa0489740:intron | 45.0% |
| GCTTCTAAACTTGTGCCTTG+AGG | - | chr3_4:10420071-10420090 | Msa0489740:intron | 45.0% | |
| AAATGATGAGAGGGAAGCCT+GGG | - | chr3_4:10420191-10420210 | Msa0489740:intron | 45.0% | |
| ! | ACCTCTCCATATTCTGGTTG+AGG | - | chr3_4:10420231-10420250 | Msa0489740:intron | 45.0% |
| ATACCAAGGCTGTTGTGGAA+GGG | + | chr3_4:10420525-10420544 | None:intergenic | 45.0% | |
| TGAAAAGGGCCAAAACAAGG+GGG | - | chr3_4:10420544-10420563 | Msa0489740:intron | 45.0% | |
| !! | GGGAATTTACCCCCTTGTTT+TGG | + | chr3_4:10420556-10420575 | None:intergenic | 45.0% |
| CTTCTCACTCGCCCTTTAAA+GGG | + | chr3_4:10420576-10420595 | None:intergenic | 45.0% | |
| TCTTCTCACTCGCCCTTTAA+AGG | + | chr3_4:10420577-10420596 | None:intergenic | 45.0% | |
| ! | AAGGGCGAGTGAGAAGATTT+TGG | - | chr3_4:10420580-10420599 | Msa0489740:intron | 45.0% |
| ! | AGAGAGTGTGTGTGTGTGGT+TGG | + | chr3_4:10415364-10415383 | None:intergenic | 50.0% |
| !! | CTCTCTCTCTGAGATGGCTT+TGG | + | chr3_4:10415390-10415409 | None:intergenic | 50.0% |
| ! | CTCTCTCTCTCTCTCTGAGA+TGG | + | chr3_4:10415396-10415415 | None:intergenic | 50.0% |
| AGATGAGGGAGTGACTGTGA+TGG | + | chr3_4:10415473-10415492 | None:intergenic | 50.0% | |
| AACGAAGACCGGAGAGATGA+GGG | + | chr3_4:10415487-10415506 | None:intergenic | 50.0% | |
| TGAAGCAGGTGAACGAAGAC+CGG | + | chr3_4:10415498-10415517 | None:intergenic | 50.0% | |
| GCAGAAGATCAGTCCCTTCA+TGG | - | chr3_4:10416287-10416306 | Msa0489740:intron | 50.0% | |
| TCGATAGCAGTGAGGAAGCA+CGG | + | chr3_4:10416313-10416332 | None:intergenic | 50.0% | |
| GCTCACTAGCCATAATCCCT+TGG | + | chr3_4:10416680-10416699 | None:intergenic | 50.0% | |
| AGTAAATGTCCTACCCCTGG+TGG | - | chr3_4:10417009-10417028 | Msa0489740:intron | 50.0% | |
| ! | CATGTTTTCTCCTCCACCAG+GGG | + | chr3_4:10417025-10417044 | None:intergenic | 50.0% |
| ! | GCATGTTTTCTCCTCCACCA+GGG | + | chr3_4:10417026-10417045 | None:intergenic | 50.0% |
| ! | AGCATGTTTTCTCCTCCACC+AGG | + | chr3_4:10417027-10417046 | None:intergenic | 50.0% |
| TCTTGGCAAACAGGGAACTC+TGG | + | chr3_4:10417052-10417071 | None:intergenic | 50.0% | |
| ! | TGCGGATTACTGCTAGATGG+AGG | - | chr3_4:10417462-10417481 | Msa0489740:CDS | 50.0% |
| !! | AGGCATGTCAGAGCTCTGAA+GGG | - | chr3_4:10417482-10417501 | Msa0489740:CDS | 50.0% |
| ACAAACTGACAGATCGCACC+TGG | - | chr3_4:10417544-10417563 | Msa0489740:intron | 50.0% | |
| CGGAACAACAGGATGAAGTG+TGG | - | chr3_4:10417574-10417593 | Msa0489740:intron | 50.0% | |
| GCCTTAAATGGGGTATGGTC+AGG | + | chr3_4:10417698-10417717 | None:intergenic | 50.0% | |
| ! | AGTGCCCTGGTGTTTTATGG+AGG | + | chr3_4:10417783-10417802 | None:intergenic | 50.0% |
| !! | GTCATGTCTATGGTGGACTG+CGG | + | chr3_4:10417852-10417871 | None:intergenic | 50.0% |
| ACCTGCCGCTCAATCTTACT+CGG | + | chr3_4:10417924-10417943 | None:intergenic | 50.0% | |
| ! | TTTGCAAGTTGAGGGAGAGG+GGG | + | chr3_4:10418113-10418132 | None:intergenic | 50.0% |
| ! | GTTTGCAAGTTGAGGGAGAG+GGG | + | chr3_4:10418114-10418133 | None:intergenic | 50.0% |
| !! | ATAATTTTCCTGCCGGCTGC+CGG | - | chr3_4:10418362-10418381 | Msa0489740:intron | 50.0% |
| CAATCACATAAACCGGCAGC+CGG | + | chr3_4:10418377-10418396 | None:intergenic | 50.0% | |
| ! | GGTCAAAGTGGGCTTGAACA+TGG | - | chr3_4:10418834-10418853 | Msa0489740:intron | 50.0% |
| AAACATTCCTCCTGCAGCCA+GGG | + | chr3_4:10418865-10418884 | None:intergenic | 50.0% | |
| AAAACATTCCTCCTGCAGCC+AGG | + | chr3_4:10418866-10418885 | None:intergenic | 50.0% | |
| ! | GGAGGAATGTTTTCGAAGGG+AGG | - | chr3_4:10418873-10418892 | Msa0489740:intron | 50.0% |
| GGTGAGGACTGTATCAGACT+TGG | + | chr3_4:10419431-10419450 | None:intergenic | 50.0% | |
| AACTTTGTTGGTCGCCTCCT+AGG | - | chr3_4:10419631-10419650 | Msa0489740:intron | 50.0% | |
| GAAATGATGAGAGGGAAGCC+TGG | - | chr3_4:10420190-10420209 | Msa0489740:intron | 50.0% | |
| GCCTCAACCAGAATATGGAG+AGG | + | chr3_4:10420235-10420254 | None:intergenic | 50.0% | |
| AATAGATGCTCGCCTGATGC+AGG | - | chr3_4:10420273-10420292 | Msa0489740:intron | 50.0% | |
| CGAAACAGAACCAGACATGG+GGG | + | chr3_4:10420502-10420521 | None:intergenic | 50.0% | |
| GCGAAACAGAACCAGACATG+GGG | + | chr3_4:10420503-10420522 | None:intergenic | 50.0% | |
| GGCGAAACAGAACCAGACAT+GGG | + | chr3_4:10420504-10420523 | None:intergenic | 50.0% | |
| CATACCAAGGCTGTTGTGGA+AGG | + | chr3_4:10420526-10420545 | None:intergenic | 50.0% | |
| GACAGCATCACCTGTGACAA+TGG | + | chr3_4:10420637-10420656 | None:intergenic | 50.0% | |
| AATGCCCTAAACTGCGATCG+AGG | - | chr3_4:10420661-10420680 | Msa0489740:intron | 50.0% | |
| AGTGCCTCGATCGCAGTTTA+GGG | + | chr3_4:10420668-10420687 | None:intergenic | 50.0% | |
| ! | GGAGAGAGAGTGTGTGTGTG+TGG | + | chr3_4:10415368-10415387 | None:intergenic | 55.0% |
| !! | AGTGACTGTGATGGTGACGG+CGG | + | chr3_4:10415464-10415483 | None:intergenic | 55.0% |
| ! | GGGAGTGACTGTGATGGTGA+CGG | + | chr3_4:10415467-10415486 | None:intergenic | 55.0% |
| CAGTCACTCCCTCATCTCTC+CGG | - | chr3_4:10415476-10415495 | Msa0489740:three_prime_UTR | 55.0% | |
| GAACGAAGACCGGAGAGATG+AGG | + | chr3_4:10415488-10415507 | None:intergenic | 55.0% | |
| ! | TGAGGAAGCACGGCCATGAA+GGG | + | chr3_4:10416303-10416322 | None:intergenic | 55.0% |
| AAATGTCCTACCCCTGGTGG+AGG | - | chr3_4:10417012-10417031 | Msa0489740:intron | 55.0% | |
| ! | TTTTCTCCTCCACCAGGGGT+AGG | + | chr3_4:10417021-10417040 | None:intergenic | 55.0% |
| GAGTGGGAACAGAGGTTGAG+CGG | - | chr3_4:10417421-10417440 | Msa0489740:CDS | 55.0% | |
| TGAGCGGCAATGTCACCTTG+AGG | - | chr3_4:10417437-10417456 | Msa0489740:CDS | 55.0% | |
| GAGCGGCAATGTCACCTTGA+GGG | - | chr3_4:10417438-10417457 | Msa0489740:CDS | 55.0% | |
| CAATGTCACCTTGAGGGCTG+CGG | - | chr3_4:10417444-10417463 | Msa0489740:CDS | 55.0% | |
| ! | GGCTGCGGATTACTGCTAGA+TGG | - | chr3_4:10417459-10417478 | Msa0489740:CDS | 55.0% |
| ! | GAGGCATGTCAGAGCTCTGA+AGG | - | chr3_4:10417481-10417500 | Msa0489740:CDS | 55.0% |
| TGACAGATCGCACCTGGATG+AGG | - | chr3_4:10417550-10417569 | Msa0489740:intron | 55.0% | |
| GACAGATCGCACCTGGATGA+GGG | - | chr3_4:10417551-10417570 | Msa0489740:intron | 55.0% | |
| ! | GGCAGTGCCCTGGTGTTTTA+TGG | + | chr3_4:10417786-10417805 | None:intergenic | 55.0% |
| !! | ATGTCTATGGTGGACTGCGG+TGG | + | chr3_4:10417849-10417868 | None:intergenic | 55.0% |
| ACCGAGTAAGATTGAGCGGC+AGG | - | chr3_4:10417920-10417939 | Msa0489740:intron | 55.0% | |
| AACATTCCTCCTGCAGCCAG+GGG | + | chr3_4:10418864-10418883 | None:intergenic | 55.0% | |
| AGTCCTCACCAACACCAAGC+TGG | - | chr3_4:10419441-10419460 | Msa0489740:intron | 55.0% | |
| AGTCCACAAGGTAGCTCGTC+TGG | - | chr3_4:10419467-10419486 | Msa0489740:intron | 55.0% | |
| AGACCAGACGAGCTACCTTG+TGG | + | chr3_4:10419473-10419492 | None:intergenic | 55.0% | |
| CCTGATCAAGACACGGCAGT+CGG | + | chr3_4:10419695-10419714 | None:intergenic | 55.0% | |
| CGACTGCCGTGTCTTGATCA+GGG | - | chr3_4:10419693-10419712 | Msa0489740:intron | 55.0% | |
| GACTGCCGTGTCTTGATCAG+GGG | - | chr3_4:10419694-10419713 | Msa0489740:intron | 55.0% | |
| ! | CGAAGATTTGCTCAGGCCTG+TGG | - | chr3_4:10420309-10420328 | Msa0489740:intron | 55.0% |
| GATCAATGGCACTCTTCGCG+AGG | - | chr3_4:10420470-10420489 | Msa0489740:intron | 55.0% | |
| AATGGCACTCTTCGCGAGGA+GGG | - | chr3_4:10420474-10420493 | Msa0489740:intron | 55.0% | |
| GGGCGAAACAGAACCAGACA+TGG | + | chr3_4:10420505-10420524 | None:intergenic | 55.0% | |
| CAGTGCCTCGATCGCAGTTT+AGG | + | chr3_4:10420669-10420688 | None:intergenic | 55.0% | |
| CTAAACTGCGATCGAGGCAC+TGG | - | chr3_4:10420667-10420686 | Msa0489740:intron | 55.0% | |
| !! | ATCGAGGCACTGGCACCATA+GGG | - | chr3_4:10420677-10420696 | Msa0489740:intron | 55.0% |
| ATGATGTCTTCCTCCGGCGC+CGG | - | chr3_4:10415422-10415441 | Msa0489740:three_prime_UTR | 60.0% | |
| CGGGAAAGCCATGTACCTGC+CGG | + | chr3_4:10415444-10415463 | None:intergenic | 60.0% | |
| !! | GTGACTGTGATGGTGACGGC+GGG | + | chr3_4:10415463-10415482 | None:intergenic | 60.0% |
| ! | GTGAGGAAGCACGGCCATGA+AGG | + | chr3_4:10416304-10416323 | None:intergenic | 60.0% |
| GCAGTAATCCGCAGCCCTCA+AGG | + | chr3_4:10417455-10417474 | None:intergenic | 60.0% | |
| AGATCGCACCTGGATGAGGG+CGG | - | chr3_4:10417554-10417573 | Msa0489740:intron | 60.0% | |
| CTGTTGTTCCGCCCTCATCC+AGG | + | chr3_4:10417565-10417584 | None:intergenic | 60.0% | |
| CTGGATGAGGGCGGAACAAC+AGG | - | chr3_4:10417563-10417582 | Msa0489740:intron | 60.0% | |
| TGTGAAGGATGGCAGTGCCC+TGG | + | chr3_4:10417796-10417815 | None:intergenic | 60.0% | |
| GCTTGAACATGGTAGCCCCC+TGG | - | chr3_4:10418845-10418864 | Msa0489740:intron | 60.0% | |
| ACATTCCTCCTGCAGCCAGG+GGG | + | chr3_4:10418863-10418882 | None:intergenic | 60.0% | |
| !! | CAGCCAGCTTGGTGTTGGTG+AGG | + | chr3_4:10419447-10419466 | None:intergenic | 60.0% |
| !! | GGACTCAGCCAGCTTGGTGT+TGG | + | chr3_4:10419452-10419471 | None:intergenic | 60.0% |
| CCTTGTGGACTCAGCCAGCT+TGG | + | chr3_4:10419458-10419477 | None:intergenic | 60.0% | |
| CCAAGCTGGCTGAGTCCACA+AGG | - | chr3_4:10419455-10419474 | Msa0489740:intron | 60.0% | |
| AGTTTCCTCTCGGGCCTAGG+AGG | + | chr3_4:10419648-10419667 | None:intergenic | 60.0% | |
| GAGAGTTTCCTCTCGGGCCT+AGG | + | chr3_4:10419651-10419670 | None:intergenic | 60.0% | |
| CCGACTGCCGTGTCTTGATC+AGG | - | chr3_4:10419692-10419711 | Msa0489740:intron | 60.0% | |
| CGCGACCCCTGATCAAGACA+CGG | + | chr3_4:10419702-10419721 | None:intergenic | 60.0% | |
| CGTGTCTTGATCAGGGGTCG+CGG | - | chr3_4:10419700-10419719 | Msa0489740:intron | 60.0% | |
| CAATGGCACTCTTCGCGAGG+AGG | - | chr3_4:10420473-10420492 | Msa0489740:intron | 60.0% | |
| TCGCCCTTCCACAACAGCCT+TGG | - | chr3_4:10420519-10420538 | Msa0489740:intron | 60.0% | |
| !! | GATCGAGGCACTGGCACCAT+AGG | - | chr3_4:10420676-10420695 | Msa0489740:intron | 60.0% |
| AGTTGAGGGAGAGGGGGAGG+AGG | + | chr3_4:10418107-10418126 | None:intergenic | 65.0% | |
| ! | GCAAGTTGAGGGAGAGGGGG+AGG | + | chr3_4:10418110-10418129 | None:intergenic | 65.0% |
| CACATAAACCGGCAGCCGGC+AGG | + | chr3_4:10418373-10418392 | None:intergenic | 65.0% | |
| GAGGAGGGTTCCCCCATGTC+TGG | - | chr3_4:10420489-10420508 | Msa0489740:intron | 65.0% | |
| AGCCATGTACCTGCCGGCGC+CGG | + | chr3_4:10415438-10415457 | None:intergenic | 70.0% | |
| CATGGTAGCCCCCTGGCTGC+AGG | - | chr3_4:10418852-10418871 | Msa0489740:intron | 70.0% | |
| !! | TGTCTTCCTCCGGCGCCGGC+AGG | - | chr3_4:10415426-10415445 | Msa0489740:three_prime_UTR | 75.0% |
| ! | CATGTACCTGCCGGCGCCGG+AGG | + | chr3_4:10415435-10415454 | None:intergenic | 75.0% |
| !! | CTCCGGCGCCGGCAGGTACA+TGG | - | chr3_4:10415433-10415452 | Msa0489740:three_prime_UTR | 75.0% |
| GGTAGCCCCCTGGCTGCAGG+AGG | - | chr3_4:10418855-10418874 | Msa0489740:intron | 75.0% | |
| GGTCGCCTCCTAGGCCCGAG+AGG | - | chr3_4:10419640-10419659 | Msa0489740:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 10415303 | 10421033 | 10415303 | ID=Msa0489740;Name=Msa0489740 |
| chr3_4 | mRNA | 10415303 | 10421033 | 10415303 | ID=Msa0489740-mRNA-1;Parent=Msa0489740;Name=Msa0489740-mRNA-1;_AED=0.06;_eAED=0.06;_QI=119|1|1|1|1|1|7|464|293 |
| chr3_4 | exon | 10415303 | 10415916 | 10415303 | ID=Msa0489740-mRNA-1:exon:3386;Parent=Msa0489740-mRNA-1 |
| chr3_4 | exon | 10416006 | 10416149 | 10416006 | ID=Msa0489740-mRNA-1:exon:3385;Parent=Msa0489740-mRNA-1 |
| chr3_4 | exon | 10416592 | 10416708 | 10416592 | ID=Msa0489740-mRNA-1:exon:3384;Parent=Msa0489740-mRNA-1 |
| chr3_4 | exon | 10416792 | 10416911 | 10416792 | ID=Msa0489740-mRNA-1:exon:3383;Parent=Msa0489740-mRNA-1 |
| chr3_4 | exon | 10417401 | 10417546 | 10417401 | ID=Msa0489740-mRNA-1:exon:3382;Parent=Msa0489740-mRNA-1 |
| chr3_4 | exon | 10419991 | 10420076 | 10419991 | ID=Msa0489740-mRNA-1:exon:3381;Parent=Msa0489740-mRNA-1 |
| chr3_4 | exon | 10420796 | 10421033 | 10420796 | ID=Msa0489740-mRNA-1:exon:3380;Parent=Msa0489740-mRNA-1 |
| chr3_4 | five_prime_UTR | 10420915 | 10421033 | 10420915 | ID=Msa0489740-mRNA-1:five_prime_utr;Parent=Msa0489740-mRNA-1 |
| chr3_4 | CDS | 10420796 | 10420914 | 10420796 | ID=Msa0489740-mRNA-1:cds;Parent=Msa0489740-mRNA-1 |
| chr3_4 | CDS | 10419991 | 10420076 | 10419991 | ID=Msa0489740-mRNA-1:cds;Parent=Msa0489740-mRNA-1 |
| chr3_4 | CDS | 10417401 | 10417546 | 10417401 | ID=Msa0489740-mRNA-1:cds;Parent=Msa0489740-mRNA-1 |
| chr3_4 | CDS | 10416792 | 10416911 | 10416792 | ID=Msa0489740-mRNA-1:cds;Parent=Msa0489740-mRNA-1 |
| chr3_4 | CDS | 10416592 | 10416708 | 10416592 | ID=Msa0489740-mRNA-1:cds;Parent=Msa0489740-mRNA-1 |
| chr3_4 | CDS | 10416006 | 10416149 | 10416006 | ID=Msa0489740-mRNA-1:cds;Parent=Msa0489740-mRNA-1 |
| chr3_4 | CDS | 10415767 | 10415916 | 10415767 | ID=Msa0489740-mRNA-1:cds;Parent=Msa0489740-mRNA-1 |
| chr3_4 | three_prime_UTR | 10415303 | 10415766 | 10415303 | ID=Msa0489740-mRNA-1:three_prime_utr;Parent=Msa0489740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
