Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0394410 | XP_003598315.1 | 99.317 | 293 | 2 | 0 | 1 | 293 | 1 | 293 | 0.0 | 590 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0394410 | sp|Q9FKT4|QKIL2_ARATH | 74.113 | 282 | 69 | 3 | 11 | 292 | 36 | 313 | 1.06e-146 | 417 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0394410 | G7J0G1 | 99.317 | 293 | 2 | 0 | 1 | 293 | 1 | 293 | 0.0 | 590 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0394410 | 0.858237 | 9.457149e-63 | -8.615850e-47 |
| Msa0027390 | Msa0394410 | -0.809484 | 1.849205e-50 | -8.615850e-47 |
| Msa0085360 | Msa0394410 | 0.804345 | 2.259148e-49 | -8.615850e-47 |
| Msa0085720 | Msa0394410 | -0.802547 | 5.327250e-49 | -8.615850e-47 |
| Msa0125370 | Msa0394410 | 0.826059 | 3.339132e-54 | -8.615850e-47 |
| Msa0145070 | Msa0394410 | -0.808799 | 2.592846e-50 | -8.615850e-47 |
| Msa0156650 | Msa0394410 | 0.806006 | 1.014368e-49 | -8.615850e-47 |
| Msa0165300 | Msa0394410 | -0.816612 | 5.056088e-52 | -8.615850e-47 |
| Msa0177700 | Msa0394410 | 0.832371 | 9.819364e-56 | -8.615850e-47 |
| Msa0188730 | Msa0394410 | 0.806410 | 8.337886e-50 | -8.615850e-47 |
| Msa0193540 | Msa0394410 | -0.805710 | 1.170572e-49 | -8.615850e-47 |
| Msa0196020 | Msa0394410 | 0.854481 | 1.196057e-61 | -8.615850e-47 |
| Msa0210410 | Msa0394410 | 0.833117 | 6.411647e-56 | -8.615850e-47 |
| Msa0223290 | Msa0394410 | -0.803385 | 3.575397e-49 | -8.615850e-47 |
| Msa0223380 | Msa0394410 | -0.811545 | 6.636235e-51 | -8.615850e-47 |
| Msa0365490 | Msa0394410 | -0.825011 | 5.915311e-54 | -8.615850e-47 |
| Msa0377530 | Msa0394410 | -0.824987 | 5.991564e-54 | -8.615850e-47 |
| Msa0388030 | Msa0394410 | 0.857401 | 1.674429e-62 | -8.615850e-47 |
| Msa0388040 | Msa0394410 | 0.848626 | 5.437220e-60 | -8.615850e-47 |
| Msa0394410 | Msa0423360 | 0.813036 | 3.136127e-51 | -8.615850e-47 |
| Msa0394410 | Msa0445280 | -0.815543 | 8.762181e-52 | -8.615850e-47 |
| Msa0394410 | Msa0464900 | -0.813307 | 2.735072e-51 | -8.615850e-47 |
| Msa0394410 | Msa0469910 | 0.831670 | 1.463600e-55 | -8.615850e-47 |
| Msa0394410 | Msa0473240 | -0.813818 | 2.111072e-51 | -8.615850e-47 |
| Msa0394410 | Msa0478840 | 0.804763 | 1.848117e-49 | -8.615850e-47 |
| Msa0394410 | Msa0489740 | 0.878660 | 2.345954e-69 | -8.615850e-47 |
| Msa0394410 | Msa0492710 | -0.803185 | 3.933360e-49 | -8.615850e-47 |
| Msa0394410 | Msa0505060 | -0.821809 | 3.313745e-53 | -8.615850e-47 |
| Msa0394410 | Msa0517490 | -0.819797 | 9.619264e-53 | -8.615850e-47 |
| Msa0394410 | Msa0531990 | 0.810157 | 1.325293e-50 | -8.615850e-47 |
| Msa0394410 | Msa0532100 | 0.814233 | 1.710349e-51 | -8.615850e-47 |
| Msa0394410 | Msa0547400 | -0.824714 | 6.947939e-54 | -8.615850e-47 |
| Msa0394410 | Msa0580390 | 0.806260 | 8.966894e-50 | -8.615850e-47 |
| Msa0394410 | Msa0587190 | -0.804666 | 1.935914e-49 | -8.615850e-47 |
| Msa0394410 | Msa0600410 | 0.801534 | 8.607143e-49 | -8.615850e-47 |
| Msa0394410 | Msa0638280 | -0.820068 | 8.338682e-53 | -8.615850e-47 |
| Msa0394410 | Msa0638320 | -0.829473 | 5.047750e-55 | -8.615850e-47 |
| Msa0394410 | Msa0648520 | -0.801060 | 1.075973e-48 | -8.615850e-47 |
| Msa0394410 | Msa0677270 | -0.827507 | 1.505554e-54 | -8.615850e-47 |
| Msa0394410 | Msa0679550 | -0.812965 | 3.250009e-51 | -8.615850e-47 |
| Msa0394410 | Msa0682950 | -0.822996 | 1.756917e-53 | -8.615850e-47 |
| Msa0394410 | Msa0691050 | -0.814385 | 1.582744e-51 | -8.615850e-47 |
| Msa0394410 | Msa0708050 | 0.800829 | 1.199191e-48 | -8.615850e-47 |
| Msa0394410 | Msa0713240 | -0.806611 | 7.562926e-50 | -8.615850e-47 |
| Msa0394410 | Msa0743680 | -0.839809 | 1.268523e-57 | -8.615850e-47 |
| Msa0394410 | Msa0754720 | 0.839788 | 1.284755e-57 | -8.615850e-47 |
| Msa0394410 | Msa0755070 | -0.806050 | 9.927661e-50 | -8.615850e-47 |
| Msa0394410 | Msa0756630 | 0.833902 | 4.084806e-56 | -8.615850e-47 |
| Msa0394410 | Msa0784620 | -0.836113 | 1.131548e-56 | -8.615850e-47 |
| Msa0394410 | Msa0795890 | 0.815651 | 8.288207e-52 | -8.615850e-47 |
| Msa0394410 | Msa0799060 | -0.824906 | 6.260628e-54 | -8.615850e-47 |
| Msa0394410 | Msa0833670 | 0.811464 | 6.909320e-51 | -8.615850e-47 |
| Msa0394410 | Msa0834440 | -0.810042 | 1.402897e-50 | -8.615850e-47 |
| Msa0394410 | Msa0863800 | -0.823444 | 1.380308e-53 | -8.615850e-47 |
| Msa0394410 | Msa0891040 | -0.813192 | 2.898389e-51 | -8.615850e-47 |
| Msa0394410 | Msa0913480 | 0.812487 | 4.136239e-51 | -8.615850e-47 |
| Msa0394410 | Msa0947530 | 0.828502 | 8.674551e-55 | -8.615850e-47 |
| Msa0394410 | Msa0959010 | -0.814478 | 1.509390e-51 | -8.615850e-47 |
| Msa0394410 | Msa0964130 | -0.820669 | 6.070732e-53 | -8.615850e-47 |
| Msa0394410 | Msa1037700 | 0.836349 | 9.860268e-57 | -8.615850e-47 |
| Msa0394410 | Msa1069660 | 0.801328 | 9.482365e-49 | -8.615850e-47 |
| Msa0394410 | Msa1070840 | -0.805131 | 1.548272e-49 | -8.615850e-47 |
| Msa0394410 | Msa1072530 | 0.814161 | 1.773931e-51 | -8.615850e-47 |
| Msa0394410 | Msa1077670 | -0.801022 | 1.095279e-48 | -8.615850e-47 |
| Msa0394410 | Msa1079370 | 0.816627 | 5.016812e-52 | -8.615850e-47 |
| Msa0394410 | Msa1118760 | -0.813440 | 2.556437e-51 | -8.615850e-47 |
| Msa0394410 | Msa1130210 | 0.850251 | 1.916621e-60 | -8.615850e-47 |
| Msa0394410 | Msa1132860 | 0.808945 | 2.412822e-50 | -8.615850e-47 |
| Msa0394410 | Msa1158660 | -0.817225 | 3.682272e-52 | -8.615850e-47 |
| Msa0394410 | Msa1207460 | 0.827799 | 1.281049e-54 | -8.615850e-47 |
| Msa0394410 | Msa1210660 | 0.803103 | 4.090017e-49 | -8.615850e-47 |
| Msa0394410 | Msa1214880 | -0.804070 | 2.576902e-49 | -8.615850e-47 |
| Msa0394410 | Msa1219810 | -0.805188 | 1.505639e-49 | -8.615850e-47 |
| Msa0394410 | Msa1236070 | 0.815055 | 1.124573e-51 | -8.615850e-47 |
| Msa0394410 | Msa1262990 | 0.804902 | 1.728754e-49 | -8.615850e-47 |
| Msa0394410 | Msa1267060 | -0.802137 | 6.471133e-49 | -8.615850e-47 |
| Msa0394410 | Msa1280620 | -0.803030 | 4.235285e-49 | -8.615850e-47 |
| Msa0394410 | Msa1294960 | -0.802061 | 6.708084e-49 | -8.615850e-47 |
| Msa0394410 | Msa1299180 | 0.804798 | 1.817039e-49 | -8.615850e-47 |
| Msa0394410 | Msa1300860 | -0.804914 | 1.718517e-49 | -8.615850e-47 |
| Msa0394410 | Msa1314770 | -0.804574 | 2.023765e-49 | -8.615850e-47 |
| Msa0394410 | Msa1331920 | -0.801811 | 7.551197e-49 | -8.615850e-47 |
| Msa0394410 | Msa1340040 | 0.825949 | 3.545446e-54 | -8.615850e-47 |
| Msa0394410 | Msa1360890 | 0.836214 | 1.066957e-56 | -8.615850e-47 |
| Msa0394410 | Msa1362510 | -0.805165 | 1.522458e-49 | -8.615850e-47 |
| Msa0394410 | Msa1396010 | 0.803705 | 3.068930e-49 | -8.615850e-47 |
| Msa0394410 | Msa1403530 | 0.803826 | 2.896562e-49 | -8.615850e-47 |
| Msa0394410 | Msa1422840 | -0.828484 | 8.761061e-55 | -8.615850e-47 |
| Msa0394410 | Msa1439960 | -0.803939 | 2.743669e-49 | -8.615850e-47 |
| Msa0394410 | Msa1442220 | 0.849098 | 4.020567e-60 | -8.615850e-47 |
| Msa0239940 | Msa0394410 | -0.801916 | 7.182709e-49 | -8.615850e-47 |
| Msa0241460 | Msa0394410 | 0.828288 | 9.770417e-55 | -8.615850e-47 |
| Msa0268090 | Msa0394410 | -0.803460 | 3.448777e-49 | -8.615850e-47 |
| Msa0270170 | Msa0394410 | 0.808658 | 2.779233e-50 | -8.615850e-47 |
| Msa0274630 | Msa0394410 | -0.802454 | 5.567193e-49 | -8.615850e-47 |
| Msa0275400 | Msa0394410 | 0.836487 | 9.091546e-57 | -8.615850e-47 |
| Msa0314120 | Msa0394410 | -0.801874 | 7.329347e-49 | -8.615850e-47 |
| Msa0333720 | Msa0394410 | 0.812618 | 3.872284e-51 | -8.615850e-47 |
| Msa0344870 | Msa0394410 | -0.807789 | 4.257047e-50 | -8.615850e-47 |
| Msa0356890 | Msa0394410 | 0.815094 | 1.102353e-51 | -8.615850e-47 |
| Msa0363170 | Msa0394410 | -0.805937 | 1.048952e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0394410 | MtrunA17_Chr3g0080071 | 99.317 | 293 | 2 | 0 | 1 | 293 | 1 | 293 | 0.0 | 590 |
| Msa0394410 | MtrunA17_Chr7g0245301 | 56.929 | 267 | 100 | 6 | 30 | 290 | 21 | 278 | 3.80e-93 | 277 |
| Msa0394410 | MtrunA17_Chr8g0334451 | 56.818 | 264 | 99 | 6 | 30 | 291 | 24 | 274 | 5.12e-91 | 271 |
| Msa0394410 | MtrunA17_Chr5g0432901 | 51.916 | 287 | 106 | 5 | 20 | 291 | 10 | 279 | 1.67e-89 | 268 |
| Msa0394410 | MtrunA17_Chr3g0108401 | 55.253 | 257 | 104 | 7 | 40 | 291 | 10 | 260 | 3.48e-85 | 256 |
| Msa0394410 | MtrunA17_Chr2g0276961 | 50.923 | 271 | 112 | 6 | 35 | 291 | 47 | 310 | 3.10e-79 | 243 |
| Msa0394410 | MtrunA17_Chr4g0018581 | 39.623 | 159 | 85 | 5 | 113 | 269 | 184 | 333 | 1.63e-25 | 106 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0394410 | AT5G56140.1 | 74.113 | 282 | 69 | 3 | 11 | 292 | 36 | 313 | 1.07e-147 | 417 |
| Msa0394410 | AT4G26480.3 | 71.731 | 283 | 74 | 4 | 11 | 293 | 32 | 308 | 1.61e-141 | 401 |
| Msa0394410 | AT4G26480.1 | 71.731 | 283 | 74 | 4 | 11 | 293 | 32 | 308 | 1.61e-141 | 401 |
| Msa0394410 | AT4G26480.2 | 76.754 | 228 | 48 | 3 | 66 | 293 | 1 | 223 | 4.76e-124 | 353 |
| Msa0394410 | AT3G08620.1 | 51.370 | 292 | 125 | 6 | 5 | 291 | 2 | 281 | 9.05e-88 | 264 |
| Msa0394410 | AT1G09660.1 | 52.330 | 279 | 115 | 8 | 24 | 291 | 25 | 296 | 1.01e-85 | 259 |
| Msa0394410 | AT1G09660.3 | 52.330 | 279 | 115 | 8 | 24 | 291 | 25 | 296 | 1.01e-85 | 259 |
| Msa0394410 | AT2G38610.2 | 54.135 | 266 | 102 | 7 | 37 | 291 | 28 | 284 | 1.34e-85 | 258 |
| Msa0394410 | AT2G38610.1 | 54.135 | 266 | 102 | 7 | 37 | 291 | 28 | 284 | 1.34e-85 | 258 |
| Msa0394410 | AT3G08620.2 | 53.112 | 241 | 103 | 4 | 56 | 291 | 1 | 236 | 1.21e-76 | 234 |
| Msa0394410 | AT1G09660.2 | 51.282 | 234 | 98 | 6 | 24 | 248 | 25 | 251 | 1.05e-69 | 217 |
| Msa0394410 | AT5G51300.1 | 45.455 | 121 | 58 | 4 | 150 | 269 | 247 | 360 | 1.72e-24 | 103 |
| Msa0394410 | AT5G51300.2 | 45.455 | 121 | 58 | 4 | 150 | 269 | 247 | 360 | 1.72e-24 | 103 |
| Msa0394410 | AT5G51300.3 | 45.455 | 121 | 58 | 4 | 150 | 269 | 247 | 360 | 1.72e-24 | 103 |
Find 119 sgRNAs with CRISPR-Local
Find 370 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCTCACTCGCCCTTTAA+AGG | 0.165755 | 3_2:+9015960 | None:intergenic |
| CAGATATCTAAGTGAGTTAT+TGG | 0.189010 | 3_2:-9020078 | Msa0394410:CDS |
| TGTCTTCTGCATTGCATCTA+TGG | 0.234143 | 3_2:-9015595 | Msa0394410:three_prime_UTR |
| CAGTGCCTCGATCGCAGTTT+AGG | 0.253137 | 3_2:+9015868 | None:intergenic |
| GAATGAACCTCTCCATATTC+TGG | 0.257374 | 3_2:-9016309 | Msa0394410:CDS |
| CTCTCTCTCTGAGATGGCTT+TGG | 0.291520 | 3_2:+9020944 | None:intergenic |
| TGTGCAGTGTGTTTACATTC+AGG | 0.322794 | 3_2:-9015825 | Msa0394410:three_prime_UTR |
| TTGCGTGTTACGACAATCTT+GGG | 0.343708 | 3_2:-9017548 | Msa0394410:CDS |
| ATTCTGCCTCAACCAGAATA+TGG | 0.350579 | 3_2:+9016297 | None:intergenic |
| TCTCTCTCTGAGATGGCTTT+GGG | 0.365256 | 3_2:+9020945 | None:intergenic |
| CTTCTCACTCGCCCTTTAAA+GGG | 0.380056 | 3_2:+9015961 | None:intergenic |
| TATAATGGTCCGCTTGAGTT+TGG | 0.381892 | 3_2:-9015776 | Msa0394410:three_prime_UTR |
| TGATTGCAGTTTAACTTTGT+CGG | 0.382796 | 3_2:-9016723 | Msa0394410:intron |
| CTCCGGCGCCGGCAGGTACA+TGG | 0.383567 | 3_2:-9020902 | Msa0394410:CDS |
| TCAGAAGATCAGTCCCTTCA+TGG | 0.405871 | 3_2:-9020048 | Msa0394410:CDS |
| AACTTTGTCGGTCGCCTCCT+AGG | 0.409990 | 3_2:-9016711 | Msa0394410:CDS |
| CCGACTGCCGTGTCTTGATC+AGG | 0.410981 | 3_2:-9016650 | Msa0394410:CDS |
| GAGAGTTTCCTCTCGGGCCT+AGG | 0.411830 | 3_2:+9016694 | None:intergenic |
| CGCTTTAGAGAGTTTCCTCT+CGG | 0.413364 | 3_2:+9016687 | None:intergenic |
| AATCGTGATACCCATCCATT+TGG | 0.415992 | 3_2:+9017440 | None:intergenic |
| TTTGCGTGTTACGACAATCT+TGG | 0.418558 | 3_2:-9017549 | Msa0394410:CDS |
| AGTGCCTCGATCGCAGTTTA+GGG | 0.422326 | 3_2:+9015869 | None:intergenic |
| GTCTTCTGCATTGCATCTAT+GGG | 0.437611 | 3_2:-9015594 | Msa0394410:three_prime_UTR |
| GTATTTCACGCGCCTGCATC+AGG | 0.438304 | 3_2:+9016249 | None:intergenic |
| AGATATCTAAGTGAGTTATT+GGG | 0.453132 | 3_2:-9020077 | Msa0394410:CDS |
| ACAACAGCCTTGGTATGAAA+AGG | 0.453437 | 3_2:-9016005 | Msa0394410:CDS |
| GATCGAGGCACTGGCACCAT+AGG | 0.457165 | 3_2:-9015858 | Msa0394410:three_prime_UTR |
| CCTTGTGGACTCAGCCAGCT+TGG | 0.458903 | 3_2:+9016888 | None:intergenic |
| TGTAGGAGGAAATGATGAGA+GGG | 0.463107 | 3_2:-9016352 | Msa0394410:intron |
| AATAGATGCTCGCCTGATGC+AGG | 0.468495 | 3_2:-9016261 | Msa0394410:CDS |
| GCTGCTTCTTGTAGAAATCA+TGG | 0.469593 | 3_2:+9016106 | None:intergenic |
| CGAGCATCTATTATTTCAGC+TGG | 0.474333 | 3_2:+9016272 | None:intergenic |
| GAAATGATGAGAGGGAAGCC+TGG | 0.474448 | 3_2:-9016344 | Msa0394410:CDS |
| TGTCTTCCTCCGGCGCCGGC+AGG | 0.476882 | 3_2:-9020909 | Msa0394410:CDS |
| AGTCCACAAGGTAGCTCGTC+TGG | 0.477212 | 3_2:-9016876 | Msa0394410:CDS |
| AAAACATTCCTCCTGCAGCC+AGG | 0.480776 | 3_2:+9017480 | None:intergenic |
| TCGCCCTTCCACAACAGCCT+TGG | 0.485899 | 3_2:-9016015 | Msa0394410:CDS |
| AAACATTCCTCCTGCAGCCA+GGG | 0.488618 | 3_2:+9017481 | None:intergenic |
| TGCACATAAAACTGACCCTA+TGG | 0.496446 | 3_2:+9015842 | None:intergenic |
| CTAAACTGCGATCGAGGCAC+TGG | 0.497181 | 3_2:-9015867 | Msa0394410:three_prime_UTR |
| GATTTGTGAGTGAGTGAGTG+AGG | 0.500607 | 3_2:+9021022 | None:intergenic |
| CGTGAACTTGCAATGATCAA+TGG | 0.500876 | 3_2:-9016078 | Msa0394410:CDS |
| CGACTGCCGTGTCTTGATCA+GGG | 0.502241 | 3_2:-9016649 | Msa0394410:CDS |
| GTGAGGAAGCACGGCCATGA+AGG | 0.505775 | 3_2:+9020034 | None:intergenic |
| TAGCACATAGTACAGTATAA+TGG | 0.507029 | 3_2:-9015791 | Msa0394410:three_prime_UTR |
| ATGAAAAGGGCCAAAACAAG+GGG | 0.510903 | 3_2:-9015991 | Msa0394410:CDS |
| CATACCAAGGCTGTTGTGGA+AGG | 0.512162 | 3_2:+9016011 | None:intergenic |
| TGAAGCAGGTGAACGAAGAC+CGG | 0.518044 | 3_2:+9020840 | None:intergenic |
| AGCCATGTACCTGCCGGCGC+CGG | 0.519420 | 3_2:+9020900 | None:intergenic |
| CTGCTTCTTGTAGAAATCAT+GGG | 0.521092 | 3_2:+9016107 | None:intergenic |
| TTTACATTCAGGTTTAAAGA+TGG | 0.521418 | 3_2:-9015814 | Msa0394410:three_prime_UTR |
| GGGCGAAACAGAACCAGACA+TGG | 0.521700 | 3_2:+9016032 | None:intergenic |
| CAGTCACTCCCTCATCTCTC+CGG | 0.521883 | 3_2:-9020859 | Msa0394410:CDS |
| ACCTCTCCATATTCTGGTTG+AGG | 0.527638 | 3_2:-9016303 | Msa0394410:CDS |
| AAGGGAGGTCTTGATCCAAA+TGG | 0.528987 | 3_2:-9017455 | Msa0394410:CDS |
| CAACAGCCTTGGTATGAAAA+GGG | 0.534662 | 3_2:-9016004 | Msa0394410:CDS |
| CATGTACCTGCCGGCGCCGG+AGG | 0.539362 | 3_2:+9020903 | None:intergenic |
| GTAGCATTAAAGATGCAGCC+AGG | 0.547742 | 3_2:-9016620 | Msa0394410:CDS |
| GGACTCAGCCAGCTTGGTGT+TGG | 0.550808 | 3_2:+9016894 | None:intergenic |
| AAATACTCGAAGATTTGCTC+AGG | 0.552789 | 3_2:-9016232 | Msa0394410:CDS |
| TGAGGAAGCACGGCCATGAA+GGG | 0.553302 | 3_2:+9020035 | None:intergenic |
| ATCGAGGCACTGGCACCATA+GGG | 0.555088 | 3_2:-9015857 | Msa0394410:three_prime_UTR |
| GGAGAGAGAGTGTGTGTGTG+TGG | 0.555579 | 3_2:+9020966 | None:intergenic |
| GAGGTCTTGATCCAAATGGA+TGG | 0.557184 | 3_2:-9017451 | Msa0394410:CDS |
| AACGAAGACCGGAGAGATGA+GGG | 0.558422 | 3_2:+9020851 | None:intergenic |
| CAGCCAGCTTGGTGTTGGTG+AGG | 0.559629 | 3_2:+9016899 | None:intergenic |
| AAATGATGAGAGGGAAGCCT+GGG | 0.563285 | 3_2:-9016343 | Msa0394410:CDS |
| TCATTCAAATGCTCATACCC+AGG | 0.563836 | 3_2:+9016326 | None:intergenic |
| GTATGAAAAGGGCCAAAACA+AGG | 0.564066 | 3_2:-9015993 | Msa0394410:CDS |
| CGTGTCTTGATCAGGGGTCG+CGG | 0.565990 | 3_2:-9016642 | Msa0394410:CDS |
| GAACGAAGACCGGAGAGATG+AGG | 0.570250 | 3_2:+9020850 | None:intergenic |
| AACATTCCTCCTGCAGCCAG+GGG | 0.570594 | 3_2:+9017482 | None:intergenic |
| ATGATGTCTTCCTCCGGCGC+CGG | 0.571284 | 3_2:-9020913 | Msa0394410:CDS |
| AGTCCTCACCAACACCAAGC+TGG | 0.572688 | 3_2:-9016902 | Msa0394410:CDS |
| AAAGCATTTACCATTGTCAC+AGG | 0.572769 | 3_2:-9015910 | Msa0394410:three_prime_UTR |
| CGGGAAAGCCATGTACCTGC+CGG | 0.573722 | 3_2:+9020894 | None:intergenic |
| TACATTAGGAAATGAATCCA+CGG | 0.578693 | 3_2:+9016818 | None:intergenic |
| GCTTTAGAGAGTTTCCTCTC+GGG | 0.579294 | 3_2:+9016688 | None:intergenic |
| AGTTTCCTCTCGGGCCTAGG+AGG | 0.581527 | 3_2:+9016697 | None:intergenic |
| GGTCAAAGTGGGCTTGAACA+TGG | 0.582190 | 3_2:-9017509 | Msa0394410:CDS |
| AATGGCACTCTTCGCGAGGA+GGG | 0.583366 | 3_2:-9016060 | Msa0394410:CDS |
| TGATCGATGATGTCTTCCTC+CGG | 0.588049 | 3_2:-9020919 | Msa0394410:exon |
| GTGACTGTGATGGTGACGGC+GGG | 0.590116 | 3_2:+9020875 | None:intergenic |
| ATACCAAGGCTGTTGTGGAA+GGG | 0.592784 | 3_2:+9016012 | None:intergenic |
| TGCTATCGATTGTTAAACCA+AGG | 0.593048 | 3_2:-9020011 | Msa0394410:intron |
| CCAAGCTGGCTGAGTCCACA+AGG | 0.593852 | 3_2:-9016888 | Msa0394410:CDS |
| GACAGCATCACCTGTGACAA+TGG | 0.594522 | 3_2:+9015900 | None:intergenic |
| CGAAGATTTGCTCAGGCCTG+TGG | 0.598724 | 3_2:-9016225 | Msa0394410:intron |
| GGCGAAACAGAACCAGACAT+GGG | 0.602014 | 3_2:+9016033 | None:intergenic |
| TCGATAGCAGTGAGGAAGCA+CGG | 0.602082 | 3_2:+9020025 | None:intergenic |
| TCAGAGATGACAGATGAAGC+AGG | 0.603828 | 3_2:+9020826 | None:intergenic |
| ACAAATTCGCCAAACTCAAG+CGG | 0.608540 | 3_2:+9015767 | None:intergenic |
| AGGTCTTGATCCAAATGGAT+GGG | 0.609971 | 3_2:-9017450 | Msa0394410:CDS |
| TATGAAAAGGGCCAAAACAA+GGG | 0.613732 | 3_2:-9015992 | Msa0394410:CDS |
| ACATTAGGAAATGAATCCAC+GGG | 0.613854 | 3_2:+9016819 | None:intergenic |
| GACTGCCGTGTCTTGATCAG+GGG | 0.614839 | 3_2:-9016648 | Msa0394410:CDS |
| CAATGGCACTCTTCGCGAGG+AGG | 0.617298 | 3_2:-9016061 | Msa0394410:CDS |
| TTGTAGGAGGAAATGATGAG+AGG | 0.621425 | 3_2:-9016353 | Msa0394410:intron |
| CGCGACCCCTGATCAAGACA+CGG | 0.621644 | 3_2:+9016643 | None:intergenic |
| GATCAATGGCACTCTTCGCG+AGG | 0.638276 | 3_2:-9016064 | Msa0394410:CDS |
| AGACCAGACGAGCTACCTTG+TGG | 0.640570 | 3_2:+9016873 | None:intergenic |
| AATGCCCTAAACTGCGATCG+AGG | 0.641368 | 3_2:-9015873 | Msa0394410:three_prime_UTR |
| TAGCATTAAAGATGCAGCCA+GGG | 0.650076 | 3_2:-9016619 | Msa0394410:intron |
| GCGAAACAGAACCAGACATG+GGG | 0.654874 | 3_2:+9016034 | None:intergenic |
| AGTGACTGTGATGGTGACGG+CGG | 0.659124 | 3_2:+9020874 | None:intergenic |
| GGTGAGGACTGTATCAGACT+TGG | 0.662412 | 3_2:+9016915 | None:intergenic |
| CCTGATCAAGACACGGCAGT+CGG | 0.666825 | 3_2:+9016650 | None:intergenic |
| TGCGTGTTACGACAATCTTG+GGG | 0.672107 | 3_2:-9017547 | Msa0394410:CDS |
| GGTCGCCTCCTAGGCCCGAG+AGG | 0.679588 | 3_2:-9016702 | Msa0394410:CDS |
| GCCTCAACCAGAATATGGAG+AGG | 0.680032 | 3_2:+9016302 | None:intergenic |
| GGGAGTGACTGTGATGGTGA+CGG | 0.691608 | 3_2:+9020871 | None:intergenic |
| GAAGACAATATATACAACGC+GGG | 0.697199 | 3_2:+9015611 | None:intergenic |
| ACATTCCTCCTGCAGCCAGG+GGG | 0.703012 | 3_2:+9017483 | None:intergenic |
| AATCAGAGTGGATATACCCG+TGG | 0.703654 | 3_2:-9016835 | Msa0394410:CDS |
| AGATGAGGGAGTGACTGTGA+TGG | 0.703735 | 3_2:+9020865 | None:intergenic |
| CGAAACAGAACCAGACATGG+GGG | 0.705906 | 3_2:+9016035 | None:intergenic |
| TGAAAAGGGCCAAAACAAGG+GGG | 0.724143 | 3_2:-9015990 | Msa0394410:CDS |
| TTTAACAATCGATAGCAGTG+AGG | 0.729649 | 3_2:+9020017 | None:intergenic |
| AGAAGACAATATATACAACG+CGG | 0.773314 | 3_2:+9015610 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATTCTTAAATTTTTCTA+TGG | - | chr3_2:9015868-9015887 | Msa0394410:three_prime_UTR | 10.0% |
| !!! | TTTTTTCCTTTTTATTTTTT+CGG | + | chr3_2:9017153-9017172 | None:intergenic | 10.0% |
| !! | CTTATATGTATTAATTATTA+CGG | + | chr3_2:9017345-9017364 | None:intergenic | 10.0% |
| !!! | TAATAATCTTTTATTCATAA+CGG | - | chr3_2:9017411-9017430 | Msa0394410:intron | 10.0% |
| !!! | ATGTTTTAAAACTAAATTAT+GGG | - | chr3_2:9018690-9018709 | Msa0394410:intron | 10.0% |
| !!! | TTGTTTTTTTTTTTTTTTGT+TGG | - | chr3_2:9020808-9020827 | Msa0394410:intron | 10.0% |
| !! | ATCATACAAAAATATGAAAA+GGG | + | chr3_2:9015788-9015807 | None:intergenic | 15.0% |
| !! | TTAAGAATTAACAATAACAA+AGG | + | chr3_2:9015859-9015878 | None:intergenic | 15.0% |
| !!! | TTGAAGTGTTTTATTTTTTT+TGG | - | chr3_2:9016229-9016248 | Msa0394410:CDS | 15.0% |
| !!! | AAATTTTTTTGTTTGATTCA+AGG | - | chr3_2:9016685-9016704 | Msa0394410:CDS | 15.0% |
| !!! | TTTTGTATTTCAAATGTTAA+AGG | - | chr3_2:9016780-9016799 | Msa0394410:intron | 15.0% |
| !! | AATATAATTATACAGTTCAA+TGG | + | chr3_2:9016832-9016851 | None:intergenic | 15.0% |
| !! | AAATAAGTAATAACAATGTA+TGG | - | chr3_2:9016859-9016878 | Msa0394410:CDS | 15.0% |
| !! | GAAAAAATAAAAAGGAAAAA+AGG | - | chr3_2:9017152-9017171 | Msa0394410:intron | 15.0% |
| !! | TGTTAATATCTTATATGTTA+AGG | - | chr3_2:9018443-9018462 | Msa0394410:intron | 15.0% |
| !! | AACAACTATAATATAGTAAA+TGG | + | chr3_2:9018528-9018547 | None:intergenic | 15.0% |
| !! | AAAAAACTTAATGACATTTA+AGG | + | chr3_2:9018666-9018685 | None:intergenic | 15.0% |
| !!! | GATGTTTTAAAACTAAATTA+TGG | - | chr3_2:9018689-9018708 | Msa0394410:intron | 15.0% |
| !! | ATAAGATAGTTAATTCATTT+CGG | + | chr3_2:9019318-9019337 | None:intergenic | 15.0% |
| !!! | ACAGTAAAATAATTTTATCT+CGG | + | chr3_2:9020001-9020020 | None:intergenic | 15.0% |
| !!! | ACATTTAGAATAATTATAAG+TGG | + | chr3_2:9020128-9020147 | None:intergenic | 15.0% |
| !! | AAATGTATATAGATTTCATT+TGG | - | chr3_2:9020142-9020161 | Msa0394410:intron | 15.0% |
| !!! | TTTTTTTTTTTTTGTTGGTT+AGG | - | chr3_2:9020813-9020832 | Msa0394410:intron | 15.0% |
| !! | GATCATACAAAAATATGAAA+AGG | + | chr3_2:9015789-9015808 | None:intergenic | 20.0% |
| !!! | TAAATTTTTCTATGGTCAAA+TGG | - | chr3_2:9015876-9015895 | Msa0394410:three_prime_UTR | 20.0% |
| !!! | AAATTTTTCTATGGTCAAAT+GGG | - | chr3_2:9015877-9015896 | Msa0394410:three_prime_UTR | 20.0% |
| !!! | TTATTTCATGATCTAAGTTT+TGG | - | chr3_2:9016039-9016058 | Msa0394410:CDS | 20.0% |
| !! | TAATTATGTCTATATTACAG+TGG | - | chr3_2:9016152-9016171 | Msa0394410:intron | 20.0% |
| !!! | AGTGGATTTTTTTGTATAAA+TGG | - | chr3_2:9016170-9016189 | Msa0394410:intron | 20.0% |
| !!! | AGACTTCTATATTTTTAGTA+GGG | + | chr3_2:9017082-9017101 | None:intergenic | 20.0% |
| !!! | TAGACTTCTATATTTTTAGT+AGG | + | chr3_2:9017083-9017102 | None:intergenic | 20.0% |
| !! | TTATGAAATAAGAACACAAA+AGG | - | chr3_2:9017494-9017513 | Msa0394410:CDS | 20.0% |
| !! | GATTAAAAAAGAAAAACACT+TGG | - | chr3_2:9017584-9017603 | Msa0394410:intron | 20.0% |
| !! | TTAAGATAATAGGTTTGTAA+CGG | + | chr3_2:9017891-9017910 | None:intergenic | 20.0% |
| !!! | CTATAAGTTAAAGCTTTTTA+TGG | + | chr3_2:9018881-9018900 | None:intergenic | 20.0% |
| !! | AAAAAATCTAGTGTTCATTA+GGG | + | chr3_2:9019782-9019801 | None:intergenic | 20.0% |
| !! | AAAAAAATCTAGTGTTCATT+AGG | + | chr3_2:9019783-9019802 | None:intergenic | 20.0% |
| !! | TATCTATTAGATTCTTATGT+CGG | + | chr3_2:9019808-9019827 | None:intergenic | 20.0% |
| !!! | TAATATGTTAATTTTTACCC+TGG | + | chr3_2:9019957-9019976 | None:intergenic | 20.0% |
| ! | AATTCACATCAATATGATGA+TGG | + | chr3_2:9016011-9016030 | None:intergenic | 25.0% |
| ! | TATAAATGGTTTGATCTTTG+TGG | - | chr3_2:9016184-9016203 | Msa0394410:intron | 25.0% |
| ! | TGAAATTACAGCAAAGAAAA+GGG | + | chr3_2:9016317-9016336 | None:intergenic | 25.0% |
| ! | TTAGATATCTGCAAAACAAA+AGG | + | chr3_2:9016469-9016488 | None:intergenic | 25.0% |
| ! | AGATATCTAAGTGAGTTATT+GGG | - | chr3_2:9016479-9016498 | Msa0394410:intron | 25.0% |
| ! | ATACAAACAAGAAAAACACA+GGG | + | chr3_2:9016613-9016632 | None:intergenic | 25.0% |
| ! | TTTGATTCAAGGAAGTTTAT+GGG | - | chr3_2:9016696-9016715 | Msa0394410:CDS | 25.0% |
| ! | AAAAAATCGAGTTCCTATTT+AGG | - | chr3_2:9017001-9017020 | Msa0394410:intron | 25.0% |
| ! | GATGAGTAAAAGATTGTTAA+TGG | - | chr3_2:9017031-9017050 | Msa0394410:intron | 25.0% |
| ! | TGCTAACCGAAAAAATAAAA+AGG | - | chr3_2:9017144-9017163 | Msa0394410:intron | 25.0% |
| ! | GATTACTTTCTCAAAATGTA+TGG | - | chr3_2:9017305-9017324 | Msa0394410:intron | 25.0% |
| ! | AAAAAGAGAAAAACCAAAGA+CGG | - | chr3_2:9017518-9017537 | Msa0394410:CDS | 25.0% |
| !!! | TTTGTAACGGATTTTCTTAA+AGG | + | chr3_2:9017878-9017897 | None:intergenic | 25.0% |
| ! | AATTCTATTGAGCCTTAAAT+GGG | + | chr3_2:9017927-9017946 | None:intergenic | 25.0% |
| ! | AAATTCTATTGAGCCTTAAA+TGG | + | chr3_2:9017928-9017947 | None:intergenic | 25.0% |
| ! | CATATGTATTACTCTCTTAA+TGG | - | chr3_2:9018174-9018193 | Msa0394410:intron | 25.0% |
| ! | GCACATTAAATTAGAATAGA+AGG | - | chr3_2:9018225-9018244 | Msa0394410:intron | 25.0% |
| ! | TTAAACTGATTGGATCATAT+TGG | - | chr3_2:9018352-9018371 | Msa0394410:intron | 25.0% |
| ! | AACACATCACTCAATTAAAA+AGG | + | chr3_2:9018418-9018437 | None:intergenic | 25.0% |
| !! | AACTAAATTATGGGTTATCT+TGG | - | chr3_2:9018699-9018718 | Msa0394410:intron | 25.0% |
| !! | TAAGAAAATGCTGACATTTT+TGG | - | chr3_2:9018975-9018994 | Msa0394410:intron | 25.0% |
| ! | TGGAAATGAAGTTATGTTAA+TGG | + | chr3_2:9019165-9019184 | None:intergenic | 25.0% |
| !!! | TTCTAAAGTACAGAATTAGA+TGG | + | chr3_2:9019185-9019204 | None:intergenic | 25.0% |
| !!! | GTAGTTCTATATTTTTGTAC+AGG | - | chr3_2:9019262-9019281 | Msa0394410:intron | 25.0% |
| ! | TTAACTATCTTATACCATCA+TGG | - | chr3_2:9019325-9019344 | Msa0394410:intron | 25.0% |
| !! | AACTTGCATTTTTGATGTTA+TGG | - | chr3_2:9019426-9019445 | Msa0394410:intron | 25.0% |
| !! | ATGAGTAGTTTTCTGAATTT+TGG | - | chr3_2:9019494-9019513 | Msa0394410:intron | 25.0% |
| ! | AGATATGATTGTCTATTTAC+CGG | + | chr3_2:9019583-9019602 | None:intergenic | 25.0% |
| !!! | CGAATTTTGATCATATTTGT+AGG | - | chr3_2:9020187-9020206 | Msa0394410:intron | 25.0% |
| !!! | ATTTTGATCATATTTGTAGG+AGG | - | chr3_2:9020190-9020209 | Msa0394410:intron | 25.0% |
| ! | GAATTATTGTCTTATCTTTC+AGG | - | chr3_2:9020420-9020439 | Msa0394410:intron | 25.0% |
| !! | TTTACATTCAGGTTTAAAGA+TGG | - | chr3_2:9020742-9020761 | Msa0394410:intron | 25.0% |
| !!! | TGGTTTTGCAATATAATGTA+TGG | - | chr3_2:9020916-9020935 | Msa0394410:CDS | 25.0% |
| ! | TTTCTGTTTCTTGCTATAGT+TGG | - | chr3_2:9015914-9015933 | Msa0394410:three_prime_UTR | 30.0% |
| ! | TCTGAAATCAGAATCATCAT+TGG | + | chr3_2:9016085-9016104 | None:intergenic | 30.0% |
| GAGCTTATGAAATATCATGA+TGG | - | chr3_2:9016103-9016122 | Msa0394410:CDS | 30.0% | |
| CTGAAATTACAGCAAAGAAA+AGG | + | chr3_2:9016318-9016337 | None:intergenic | 30.0% | |
| CGTTTGATATTTGCGAATAA+CGG | - | chr3_2:9016406-9016425 | Msa0394410:intron | 30.0% | |
| CAGATATCTAAGTGAGTTAT+TGG | - | chr3_2:9016478-9016497 | Msa0394410:intron | 30.0% | |
| TACAAACAAGAAAAACACAG+GGG | + | chr3_2:9016612-9016631 | None:intergenic | 30.0% | |
| CATACAAACAAGAAAAACAC+AGG | + | chr3_2:9016614-9016633 | None:intergenic | 30.0% | |
| GTTTGATTCAAGGAAGTTTA+TGG | - | chr3_2:9016695-9016714 | Msa0394410:CDS | 30.0% | |
| TTCATTCGTTTATTGACCAA+GGG | - | chr3_2:9016882-9016901 | Msa0394410:CDS | 30.0% | |
| ! | GGTTTATCTGTTTTGTGAAT+TGG | - | chr3_2:9016924-9016943 | Msa0394410:intron | 30.0% |
| TTACTTCTTGCGGATAAAAT+GGG | + | chr3_2:9017215-9017234 | None:intergenic | 30.0% | |
| TTTACTTCTTGCGGATAAAA+TGG | + | chr3_2:9017216-9017235 | None:intergenic | 30.0% | |
| ATTAATTATTACGGAGAGTC+AGG | + | chr3_2:9017336-9017355 | None:intergenic | 30.0% | |
| ! | CTTGGAATCTTTAGTTTCAT+TGG | - | chr3_2:9017602-9017621 | Msa0394410:intron | 30.0% |
| TGGTCAGGAATTAAGATAAT+AGG | + | chr3_2:9017901-9017920 | None:intergenic | 30.0% | |
| ATTCTATTGAGCCTTAAATG+GGG | + | chr3_2:9017926-9017945 | None:intergenic | 30.0% | |
| CTTAATGGTAGTTAAAAGTC+AGG | - | chr3_2:9018189-9018208 | Msa0394410:intron | 30.0% | |
| AAAAGTCAGGTATTCATCTA+TGG | - | chr3_2:9018202-9018221 | Msa0394410:intron | 30.0% | |
| AAAGTCAGGTATTCATCTAT+GGG | - | chr3_2:9018203-9018222 | Msa0394410:intron | 30.0% | |
| AATGAAGAAAATGATCGGAA+AGG | + | chr3_2:9018301-9018320 | None:intergenic | 30.0% | |
| GAGGAAATGAAGAAAATGAT+CGG | + | chr3_2:9018306-9018325 | None:intergenic | 30.0% | |
| ! | AGTTTAAGTTTGCAAGTTGA+GGG | + | chr3_2:9018339-9018358 | None:intergenic | 30.0% |
| ACTTGCAAACTTAAACTGAT+TGG | - | chr3_2:9018342-9018361 | Msa0394410:intron | 30.0% | |
| ! | TCTTCCTTCTGAAAAAGTAA+TGG | - | chr3_2:9018550-9018569 | Msa0394410:intron | 30.0% |
| !!! | CATTCCATTACTTTTTCAGA+AGG | + | chr3_2:9018557-9018576 | None:intergenic | 30.0% |
| AGAAAAAATACATGCAGTCA+AGG | + | chr3_2:9018841-9018860 | None:intergenic | 30.0% | |
| ATCCTTTCATTGACATAGTT+AGG | - | chr3_2:9019399-9019418 | Msa0394410:intron | 30.0% | |
| ATCCTAACTATGTCAATGAA+AGG | + | chr3_2:9019404-9019423 | None:intergenic | 30.0% | |
| TGAATTTACTACTGAATCAG+AGG | + | chr3_2:9019546-9019565 | None:intergenic | 30.0% | |
| TGTTAAAAAGACAATCAGAG+TGG | - | chr3_2:9019709-9019728 | Msa0394410:intron | 30.0% | |
| TACATTAGGAAATGAATCCA+CGG | + | chr3_2:9019741-9019760 | None:intergenic | 30.0% | |
| TGGATTCATTTCCTAATGTA+TGG | - | chr3_2:9019741-9019760 | Msa0394410:intron | 30.0% | |
| ATTCATTTCCTAATGTATGG+AGG | - | chr3_2:9019744-9019763 | Msa0394410:intron | 30.0% | |
| ! | TGATTGCAGTTTAACTTTGT+CGG | - | chr3_2:9019833-9019852 | Msa0394410:intron | 30.0% |
| GGAAAATATTCATCAGATGA+TGG | + | chr3_2:9020083-9020102 | None:intergenic | 30.0% | |
| AGATCTCTAGGTGAAATAAA+TGG | + | chr3_2:9020104-9020123 | None:intergenic | 30.0% | |
| ATTATAAGTGGTAGATCTCT+AGG | + | chr3_2:9020116-9020135 | None:intergenic | 30.0% | |
| ATGAGATTAGACAACTTGAT+AGG | - | chr3_2:9020374-9020393 | Msa0394410:intron | 30.0% | |
| TGAGATTAGACAACTTGATA+GGG | - | chr3_2:9020375-9020394 | Msa0394410:intron | 30.0% | |
| TAGCACATAGTACAGTATAA+TGG | - | chr3_2:9020765-9020784 | Msa0394410:intron | 30.0% | |
| !! | TGCATTTGACAGTTTTGATA+TGG | - | chr3_2:9020896-9020915 | Msa0394410:CDS | 30.0% |
| AGAAGACAATATATACAACG+CGG | + | chr3_2:9020949-9020968 | None:intergenic | 30.0% | |
| AATCATCATTGGCATGAACA+AGG | + | chr3_2:9016074-9016093 | None:intergenic | 35.0% | |
| TTGGTTGAGAAATGAGTTTG+TGG | - | chr3_2:9016248-9016267 | Msa0394410:CDS | 35.0% | |
| ! | TGATATTTGCGAATAACGGA+TGG | - | chr3_2:9016410-9016429 | Msa0394410:intron | 35.0% |
| TTTAACAATCGATAGCAGTG+AGG | + | chr3_2:9016542-9016561 | None:intergenic | 35.0% | |
| ! | TGCTATCGATTGTTAAACCA+AGG | - | chr3_2:9016545-9016564 | Msa0394410:intron | 35.0% |
| TCGATTGTTAAACCAAGGTT+AGG | - | chr3_2:9016550-9016569 | Msa0394410:intron | 35.0% | |
| ! | TCAATTTGCTTATAGAGCAG+AGG | + | chr3_2:9016730-9016749 | None:intergenic | 35.0% |
| GTTCATTCGTTTATTGACCA+AGG | - | chr3_2:9016881-9016900 | Msa0394410:CDS | 35.0% | |
| GTTTATTGACCAAGGGATTA+TGG | - | chr3_2:9016889-9016908 | Msa0394410:CDS | 35.0% | |
| ! | GAGTAAGTCGAACTGAATTT+TGG | - | chr3_2:9016965-9016984 | Msa0394410:intron | 35.0% |
| ! | ATCGAGTTCCTATTTAGGAT+CGG | - | chr3_2:9017006-9017025 | Msa0394410:intron | 35.0% |
| ATGATGTAATCAACGTTACC+TGG | - | chr3_2:9017120-9017139 | Msa0394410:intron | 35.0% | |
| TGATGTAATCAACGTTACCT+GGG | - | chr3_2:9017121-9017140 | Msa0394410:intron | 35.0% | |
| TACTTCTTGCGGATAAAATG+GGG | + | chr3_2:9017214-9017233 | None:intergenic | 35.0% | |
| !! | TAATCAGATCGCTGATTTCT+TGG | + | chr3_2:9017290-9017309 | None:intergenic | 35.0% |
| GTCTGTTTGTCATCTCTTAT+TGG | + | chr3_2:9017748-9017767 | None:intergenic | 35.0% | |
| ! | TCAATCAGTGTTATCGATTG+TGG | - | chr3_2:9017956-9017975 | Msa0394410:intron | 35.0% |
| !!! | TATGGAGGATTTTGGGTTTT+CGG | + | chr3_2:9017986-9018005 | None:intergenic | 35.0% |
| ! | GGTGTTTTATGGAGGATTTT+GGG | + | chr3_2:9017993-9018012 | None:intergenic | 35.0% |
| ! | TGGTGTTTTATGGAGGATTT+TGG | + | chr3_2:9017994-9018013 | None:intergenic | 35.0% |
| AAAATCCTCCATAAAACACC+AGG | - | chr3_2:9017993-9018012 | Msa0394410:intron | 35.0% | |
| AAATCCTCCATAAAACACCA+GGG | - | chr3_2:9017994-9018013 | Msa0394410:intron | 35.0% | |
| ! | CAAAGTGTTTGTCATGTCTA+TGG | + | chr3_2:9018080-9018099 | None:intergenic | 35.0% |
| CATAGACATGACAAACACTT+TGG | - | chr3_2:9018078-9018097 | Msa0394410:intron | 35.0% | |
| GAGGATAAAGGATCAAGTAT+TGG | + | chr3_2:9018270-9018289 | None:intergenic | 35.0% | |
| GAAAATGATCGGAAAGGAAA+GGG | + | chr3_2:9018295-9018314 | None:intergenic | 35.0% | |
| AGAAAATGATCGGAAAGGAA+AGG | + | chr3_2:9018296-9018315 | None:intergenic | 35.0% | |
| ! | CAGTTTAAGTTTGCAAGTTG+AGG | + | chr3_2:9018340-9018359 | None:intergenic | 35.0% |
| CTACTGTTCAAAGCAAAAGA+TGG | + | chr3_2:9018489-9018508 | None:intergenic | 35.0% | |
| ! | TGGAATGATAATTTTCCTGC+CGG | - | chr3_2:9018570-9018589 | Msa0394410:intron | 35.0% |
| AAAGCAGCAATCACATAAAC+CGG | + | chr3_2:9018599-9018618 | None:intergenic | 35.0% | |
| ATCAGTGAACCATTGAAACA+GGG | + | chr3_2:9018729-9018748 | None:intergenic | 35.0% | |
| GTTCACTGATCTGATTTCTT+GGG | - | chr3_2:9018739-9018758 | Msa0394410:intron | 35.0% | |
| !!! | CATCAGTTTTAGGTCAAAGT+GGG | - | chr3_2:9019036-9019055 | Msa0394410:intron | 35.0% |
| CACGATTTCAATCAGAAGTA+CGG | - | chr3_2:9019132-9019151 | Msa0394410:intron | 35.0% | |
| ACTCATGAAATTCATTCGAC+TGG | - | chr3_2:9019237-9019256 | Msa0394410:intron | 35.0% | |
| TCAGGATGTCAGTAAATGAT+GGG | + | chr3_2:9019380-9019399 | None:intergenic | 35.0% | |
| ATCAGGATGTCAGTAAATGA+TGG | + | chr3_2:9019381-9019400 | None:intergenic | 35.0% | |
| ACTATGTCAATGAAAGGATC+AGG | + | chr3_2:9019398-9019417 | None:intergenic | 35.0% | |
| ACATTAGGAAATGAATCCAC+GGG | + | chr3_2:9019740-9019759 | None:intergenic | 35.0% | |
| ! | AAATACTCGAAGATTTGCTC+AGG | - | chr3_2:9020324-9020343 | Msa0394410:intron | 35.0% |
| AATTCACAACAACATACCAC+AGG | + | chr3_2:9020350-9020369 | None:intergenic | 35.0% | |
| CTGCTTCTTGTAGAAATCAT+GGG | + | chr3_2:9020452-9020471 | None:intergenic | 35.0% | |
| TATGAAAAGGGCCAAAACAA+GGG | - | chr3_2:9020564-9020583 | Msa0394410:intron | 35.0% | |
| ! | AAAGCATTTACCATTGTCAC+AGG | - | chr3_2:9020646-9020665 | Msa0394410:intron | 35.0% |
| !! | TTTTTGTTGGTTAGGCTGTT+TGG | - | chr3_2:9020821-9020840 | Msa0394410:CDS | 35.0% |
| GAAGACAATATATACAACGC+GGG | + | chr3_2:9020948-9020967 | None:intergenic | 35.0% | |
| TTTGACAGTGAACCTAACCT+TGG | + | chr3_2:9016565-9016584 | None:intergenic | 40.0% | |
| TAGGTTCACTGTCAAAGTAG+TGG | - | chr3_2:9016569-9016588 | Msa0394410:intron | 40.0% | |
| AAACAAGAAAAACACAGGGG+AGG | + | chr3_2:9016609-9016628 | None:intergenic | 40.0% | |
| ! | TCGAGTTCCTATTTAGGATC+GGG | - | chr3_2:9017007-9017026 | Msa0394410:intron | 40.0% |
| TGATCACAACGCAGATCATA+CGG | - | chr3_2:9017056-9017075 | Msa0394410:intron | 40.0% | |
| !!! | TATTTTTTCGGTTAGCACCC+AGG | + | chr3_2:9017141-9017160 | None:intergenic | 40.0% |
| ACTTCTTGCGGATAAAATGG+GGG | + | chr3_2:9017213-9017232 | None:intergenic | 40.0% | |
| GGTAGGACATTTACTTCTTG+CGG | + | chr3_2:9017225-9017244 | None:intergenic | 40.0% | |
| TAATCTCACTTCTCCGTCTT+TGG | + | chr3_2:9017534-9017553 | None:intergenic | 40.0% | |
| AAAGACGGAGAAGTGAGATT+AGG | - | chr3_2:9017533-9017552 | Msa0394410:CDS | 40.0% | |
| TGGACAAAGAAACTAGAGAG+TGG | - | chr3_2:9017622-9017641 | Msa0394410:intron | 40.0% | |
| GGACAAAGAAACTAGAGAGT+GGG | - | chr3_2:9017623-9017642 | Msa0394410:intron | 40.0% | |
| ATTGAGCCTTAAATGGGGTA+TGG | + | chr3_2:9017921-9017940 | None:intergenic | 40.0% | |
| ! | AGATTTTGTGACAGCTGTCA+TGG | + | chr3_2:9018043-9018062 | None:intergenic | 40.0% |
| AGTGTTTGTCATGTCTATGG+TGG | + | chr3_2:9018077-9018096 | None:intergenic | 40.0% | |
| AAGGAAAGGGAAGAGGATAA+AGG | + | chr3_2:9018282-9018301 | None:intergenic | 40.0% | |
| CTTGGAATACCCTGTTTCAA+TGG | - | chr3_2:9018717-9018736 | Msa0394410:intron | 40.0% | |
| GATCAGTGAACCATTGAAAC+AGG | + | chr3_2:9018730-9018749 | None:intergenic | 40.0% | |
| GGTTCACTGATCTGATTTCT+TGG | - | chr3_2:9018738-9018757 | Msa0394410:intron | 40.0% | |
| ! | GCTTTTTATGGTAGTACTCG+AGG | + | chr3_2:9018869-9018888 | None:intergenic | 40.0% |
| CAAACATCCAAGCTGTCTAT+CGG | - | chr3_2:9018929-9018948 | Msa0394410:intron | 40.0% | |
| TACAAAACCGATAGACAGCT+TGG | + | chr3_2:9018939-9018958 | None:intergenic | 40.0% | |
| TTTGCGTGTTACGACAATCT+TGG | - | chr3_2:9019007-9019026 | Msa0394410:intron | 40.0% | |
| TTGCGTGTTACGACAATCTT+GGG | - | chr3_2:9019008-9019027 | Msa0394410:intron | 40.0% | |
| ! | TTGGGGAATGCATCAGTTTT+AGG | - | chr3_2:9019026-9019045 | Msa0394410:intron | 40.0% |
| !!! | GCATCAGTTTTAGGTCAAAG+TGG | - | chr3_2:9019035-9019054 | Msa0394410:intron | 40.0% |
| AGGTCTTGATCCAAATGGAT+GGG | - | chr3_2:9019106-9019125 | Msa0394410:intron | 40.0% | |
| AATCGTGATACCCATCCATT+TGG | + | chr3_2:9019119-9019138 | None:intergenic | 40.0% | |
| ! | CAGATGCTTTTGAACCATGA+TGG | + | chr3_2:9019342-9019361 | None:intergenic | 40.0% |
| ! | TCAGCTAGTGCAAACCTTTT+TGG | - | chr3_2:9019517-9019536 | Msa0394410:intron | 40.0% |
| ATTCATGTTCATCTGCATGC+CGG | - | chr3_2:9019561-9019580 | Msa0394410:intron | 40.0% | |
| GATGTGATCCTCCATACATT+AGG | + | chr3_2:9019755-9019774 | None:intergenic | 40.0% | |
| TAGCATTAAAGATGCAGCCA+GGG | - | chr3_2:9019937-9019956 | Msa0394410:intron | 40.0% | |
| TTGTAGGAGGAAATGATGAG+AGG | - | chr3_2:9020203-9020222 | Msa0394410:intron | 40.0% | |
| TGTAGGAGGAAATGATGAGA+GGG | - | chr3_2:9020204-9020223 | Msa0394410:intron | 40.0% | |
| TCATTCAAATGCTCATACCC+AGG | + | chr3_2:9020233-9020252 | None:intergenic | 40.0% | |
| GAATGAACCTCTCCATATTC+TGG | - | chr3_2:9020247-9020266 | Msa0394410:intron | 40.0% | |
| ATTCTGCCTCAACCAGAATA+TGG | + | chr3_2:9020262-9020281 | None:intergenic | 40.0% | |
| CGAGCATCTATTATTTCAGC+TGG | + | chr3_2:9020287-9020306 | None:intergenic | 40.0% | |
| GCTGCTTCTTGTAGAAATCA+TGG | + | chr3_2:9020453-9020472 | None:intergenic | 40.0% | |
| CGTGAACTTGCAATGATCAA+TGG | - | chr3_2:9020478-9020497 | Msa0394410:intron | 40.0% | |
| ! | TTTTCATACCAAGGCTGTTG+TGG | + | chr3_2:9020552-9020571 | None:intergenic | 40.0% |
| ACAACAGCCTTGGTATGAAA+AGG | - | chr3_2:9020551-9020570 | Msa0394410:intron | 40.0% | |
| CAACAGCCTTGGTATGAAAA+GGG | - | chr3_2:9020552-9020571 | Msa0394410:intron | 40.0% | |
| ! | TTTTGGCCCTTTTCATACCA+AGG | + | chr3_2:9020561-9020580 | None:intergenic | 40.0% |
| GTATGAAAAGGGCCAAAACA+AGG | - | chr3_2:9020563-9020582 | Msa0394410:intron | 40.0% | |
| ATGAAAAGGGCCAAAACAAG+GGG | - | chr3_2:9020565-9020584 | Msa0394410:intron | 40.0% | |
| AGGGGGTAAATTCCCTTTAA+AGG | - | chr3_2:9020583-9020602 | Msa0394410:intron | 40.0% | |
| GGGGGTAAATTCCCTTTAAA+GGG | - | chr3_2:9020584-9020603 | Msa0394410:intron | 40.0% | |
| TGCACATAAAACTGACCCTA+TGG | + | chr3_2:9020717-9020736 | None:intergenic | 40.0% | |
| TGTGCAGTGTGTTTACATTC+AGG | - | chr3_2:9020731-9020750 | Msa0394410:intron | 40.0% | |
| TATAATGGTCCGCTTGAGTT+TGG | - | chr3_2:9020780-9020799 | Msa0394410:intron | 40.0% | |
| ACAAATTCGCCAAACTCAAG+CGG | + | chr3_2:9020792-9020811 | None:intergenic | 40.0% | |
| TGTCTTCTGCATTGCATCTA+TGG | - | chr3_2:9020961-9020980 | Msa0394410:five_prime_UTR | 40.0% | |
| GTCTTCTGCATTGCATCTAT+GGG | - | chr3_2:9020962-9020981 | Msa0394410:five_prime_UTR | 40.0% | |
| GATTTGTGAGTGAGTGAGTG+AGG | + | chr3_2:9015537-9015556 | None:intergenic | 45.0% | |
| !! | TCTCTCTCTGAGATGGCTTT+GGG | + | chr3_2:9015614-9015633 | None:intergenic | 45.0% |
| ! | ATCACTCTCTCTCTCTGAGA+TGG | + | chr3_2:9015621-9015640 | None:intergenic | 45.0% |
| TGATCGATGATGTCTTCCTC+CGG | - | chr3_2:9015637-9015656 | Msa0394410:three_prime_UTR | 45.0% | |
| TCAGAGATGACAGATGAAGC+AGG | + | chr3_2:9015733-9015752 | None:intergenic | 45.0% | |
| ! | GATGTGCTATTCTCACTGCA+TGG | - | chr3_2:9016437-9016456 | Msa0394410:intron | 45.0% |
| TCAGAAGATCAGTCCCTTCA+TGG | - | chr3_2:9016508-9016527 | Msa0394410:intron | 45.0% | |
| ! | GGATTATGGCTTGTGAGCAT+TGG | - | chr3_2:9016903-9016922 | Msa0394410:CDS | 45.0% |
| CTCATCACCCGATCCTAAAT+AGG | + | chr3_2:9017017-9017036 | None:intergenic | 45.0% | |
| AGAAGTAAATGTCCTACCCC+TGG | - | chr3_2:9017227-9017246 | Msa0394410:intron | 45.0% | |
| !! | CGCTGATTTCTTGGCAAACA+GGG | + | chr3_2:9017281-9017300 | None:intergenic | 45.0% |
| !! | TCGCTGATTTCTTGGCAAAC+AGG | + | chr3_2:9017282-9017301 | None:intergenic | 45.0% |
| AAACTAGAGAGTGGGAACAG+AGG | - | chr3_2:9017631-9017650 | Msa0394410:intron | 45.0% | |
| TGCAGATTACTGCTAGATGG+AGG | - | chr3_2:9017680-9017699 | Msa0394410:intron | 45.0% | |
| TGGTCCAGTTACAAACTCAC+AGG | + | chr3_2:9017728-9017747 | None:intergenic | 45.0% | |
| TCCTGACCATACCCCATTTA+AGG | - | chr3_2:9017912-9017931 | Msa0394410:intron | 45.0% | |
| ! | TCAGTGTTATCGATTGTGGC+TGG | - | chr3_2:9017960-9017979 | Msa0394410:intron | 45.0% |
| ATCGACCGAGTAAGATTGAG+CGG | - | chr3_2:9018134-9018153 | Msa0394410:intron | 45.0% | |
| ! | AGTTTGCAAGTTGAGGGAGA+GGG | + | chr3_2:9018333-9018352 | None:intergenic | 45.0% |
| ! | AAGTTTGCAAGTTGAGGGAG+AGG | + | chr3_2:9018334-9018353 | None:intergenic | 45.0% |
| !! | ATAATTTTCCTGCCGGTTGC+CGG | - | chr3_2:9018577-9018596 | Msa0394410:intron | 45.0% |
| CAATCACATAAACCGGCAAC+CGG | + | chr3_2:9018592-9018611 | None:intergenic | 45.0% | |
| ACATGACCCTTGAGTCAAGA+AGG | - | chr3_2:9018814-9018833 | Msa0394410:intron | 45.0% | |
| CATGACCCTTGAGTCAAGAA+GGG | - | chr3_2:9018815-9018834 | Msa0394410:intron | 45.0% | |
| TGCGTGTTACGACAATCTTG+GGG | - | chr3_2:9019009-9019028 | Msa0394410:intron | 45.0% | |
| ! | TGCAGGAGGAATGTTTTCGA+AGG | - | chr3_2:9019082-9019101 | Msa0394410:intron | 45.0% |
| ! | GCAGGAGGAATGTTTTCGAA+GGG | - | chr3_2:9019083-9019102 | Msa0394410:intron | 45.0% |
| AAGGGAGGTCTTGATCCAAA+TGG | - | chr3_2:9019101-9019120 | Msa0394410:intron | 45.0% | |
| GAGGTCTTGATCCAAATGGA+TGG | - | chr3_2:9019105-9019124 | Msa0394410:intron | 45.0% | |
| ! | GCTAGTGCAAACCTTTTTGG+TGG | - | chr3_2:9019520-9019539 | Msa0394410:intron | 45.0% |
| TGAATCAGAGGCCACCAAAA+AGG | + | chr3_2:9019534-9019553 | None:intergenic | 45.0% | |
| AATCAGAGTGGATATACCCG+TGG | - | chr3_2:9019721-9019740 | Msa0394410:intron | 45.0% | |
| !! | GCTTTAGAGAGTTTCCTCTC+GGG | + | chr3_2:9019871-9019890 | None:intergenic | 45.0% |
| !! | CGCTTTAGAGAGTTTCCTCT+CGG | + | chr3_2:9019872-9019891 | None:intergenic | 45.0% |
| GTAGCATTAAAGATGCAGCC+AGG | - | chr3_2:9019936-9019955 | Msa0394410:intron | 45.0% | |
| AAATGATGAGAGGGAAGCCT+GGG | - | chr3_2:9020213-9020232 | Msa0394410:intron | 45.0% | |
| ! | ACCTCTCCATATTCTGGTTG+AGG | - | chr3_2:9020253-9020272 | Msa0394410:intron | 45.0% |
| ATACCAAGGCTGTTGTGGAA+GGG | + | chr3_2:9020547-9020566 | None:intergenic | 45.0% | |
| TGAAAAGGGCCAAAACAAGG+GGG | - | chr3_2:9020566-9020585 | Msa0394410:intron | 45.0% | |
| !! | GGGAATTTACCCCCTTGTTT+TGG | + | chr3_2:9020578-9020597 | None:intergenic | 45.0% |
| CTTCTCACTCGCCCTTTAAA+GGG | + | chr3_2:9020598-9020617 | None:intergenic | 45.0% | |
| TCTTCTCACTCGCCCTTTAA+AGG | + | chr3_2:9020599-9020618 | None:intergenic | 45.0% | |
| ! | AGAGAGTGTGTGTGTGTGGT+TGG | + | chr3_2:9015589-9015608 | None:intergenic | 50.0% |
| !! | CTCTCTCTCTGAGATGGCTT+TGG | + | chr3_2:9015615-9015634 | None:intergenic | 50.0% |
| AGATGAGGGAGTGACTGTGA+TGG | + | chr3_2:9015694-9015713 | None:intergenic | 50.0% | |
| AACGAAGACCGGAGAGATGA+GGG | + | chr3_2:9015708-9015727 | None:intergenic | 50.0% | |
| TGAAGCAGGTGAACGAAGAC+CGG | + | chr3_2:9015719-9015738 | None:intergenic | 50.0% | |
| TCGATAGCAGTGAGGAAGCA+CGG | + | chr3_2:9016534-9016553 | None:intergenic | 50.0% | |
| GCTCACAAGCCATAATCCCT+TGG | + | chr3_2:9016901-9016920 | None:intergenic | 50.0% | |
| AGTAAATGTCCTACCCCTGG+TGG | - | chr3_2:9017230-9017249 | Msa0394410:intron | 50.0% | |
| ! | CATGTTTTCTCCTCCACCAG+GGG | + | chr3_2:9017246-9017265 | None:intergenic | 50.0% |
| ! | GCATGTTTTCTCCTCCACCA+GGG | + | chr3_2:9017247-9017266 | None:intergenic | 50.0% |
| ! | AGCATGTTTTCTCCTCCACC+AGG | + | chr3_2:9017248-9017267 | None:intergenic | 50.0% |
| TCTTGGCAAACAGGGAACTC+TGG | + | chr3_2:9017273-9017292 | None:intergenic | 50.0% | |
| GGCTGCAGATTACTGCTAGA+TGG | - | chr3_2:9017677-9017696 | Msa0394410:intron | 50.0% | |
| ! | ACTGCTAGATGGAGGCATGT+CGG | - | chr3_2:9017688-9017707 | Msa0394410:intron | 50.0% |
| GGCTCCTGTGAGTTTGTAAC+TGG | - | chr3_2:9017721-9017740 | Msa0394410:intron | 50.0% | |
| CTCATCCAGGTGTGATCTGT+CGG | + | chr3_2:9017770-9017789 | None:intergenic | 50.0% | |
| GACAGATCACACCTGGATGA+GGG | - | chr3_2:9017769-9017788 | Msa0394410:intron | 50.0% | |
| CGGAACAACAGGATGAAGTG+TGG | - | chr3_2:9017792-9017811 | Msa0394410:intron | 50.0% | |
| GCCTTAAATGGGGTATGGTC+AGG | + | chr3_2:9017916-9017935 | None:intergenic | 50.0% | |
| ! | AGTGCCCTGGTGTTTTATGG+AGG | + | chr3_2:9018001-9018020 | None:intergenic | 50.0% |
| CACTGCCATCCTTCGCAAAT+TGG | - | chr3_2:9018017-9018036 | Msa0394410:intron | 50.0% | |
| CATGGCCAATTTGCGAAGGA+TGG | + | chr3_2:9018025-9018044 | None:intergenic | 50.0% | |
| CTGTCATGGCCAATTTGCGA+AGG | + | chr3_2:9018029-9018048 | None:intergenic | 50.0% | |
| !! | GTCATGTCTATGGTGGACTG+CGG | + | chr3_2:9018070-9018089 | None:intergenic | 50.0% |
| ACCTGCCGCTCAATCTTACT+CGG | + | chr3_2:9018142-9018161 | None:intergenic | 50.0% | |
| GATCGGAAAGGAAAGGGAAG+AGG | + | chr3_2:9018289-9018308 | None:intergenic | 50.0% | |
| ! | TTTGCAAGTTGAGGGAGAGG+GGG | + | chr3_2:9018331-9018350 | None:intergenic | 50.0% |
| ! | GTTTGCAAGTTGAGGGAGAG+GGG | + | chr3_2:9018332-9018351 | None:intergenic | 50.0% |
| CAAGGCCCTTCTTGACTCAA+GGG | + | chr3_2:9018823-9018842 | None:intergenic | 50.0% | |
| TCAAGGCCCTTCTTGACTCA+AGG | + | chr3_2:9018824-9018843 | None:intergenic | 50.0% | |
| ! | GGTCAAAGTGGGCTTGAACA+TGG | - | chr3_2:9019047-9019066 | Msa0394410:intron | 50.0% |
| AAACATTCCTCCTGCAGCCA+GGG | + | chr3_2:9019078-9019097 | None:intergenic | 50.0% | |
| AAAACATTCCTCCTGCAGCC+AGG | + | chr3_2:9019079-9019098 | None:intergenic | 50.0% | |
| ! | GGAGGAATGTTTTCGAAGGG+AGG | - | chr3_2:9019086-9019105 | Msa0394410:intron | 50.0% |
| GGTGAGGACTGTATCAGACT+TGG | + | chr3_2:9019644-9019663 | None:intergenic | 50.0% | |
| GAAATGATGAGAGGGAAGCC+TGG | - | chr3_2:9020212-9020231 | Msa0394410:intron | 50.0% | |
| GCCTCAACCAGAATATGGAG+AGG | + | chr3_2:9020257-9020276 | None:intergenic | 50.0% | |
| AATAGATGCTCGCCTGATGC+AGG | - | chr3_2:9020295-9020314 | Msa0394410:intron | 50.0% | |
| GCGAAACAGAACCAGACATG+GGG | + | chr3_2:9020525-9020544 | None:intergenic | 50.0% | |
| GGCGAAACAGAACCAGACAT+GGG | + | chr3_2:9020526-9020545 | None:intergenic | 50.0% | |
| CATACCAAGGCTGTTGTGGA+AGG | + | chr3_2:9020548-9020567 | None:intergenic | 50.0% | |
| GACAGCATCACCTGTGACAA+TGG | + | chr3_2:9020659-9020678 | None:intergenic | 50.0% | |
| AATGCCCTAAACTGCGATCG+AGG | - | chr3_2:9020683-9020702 | Msa0394410:intron | 50.0% | |
| AGTGCCTCGATCGCAGTTTA+GGG | + | chr3_2:9020690-9020709 | None:intergenic | 50.0% | |
| ! | GGAGAGAGAGTGTGTGTGTG+TGG | + | chr3_2:9015593-9015612 | None:intergenic | 55.0% |
| !! | AGTGACTGTGATGGTGACGG+CGG | + | chr3_2:9015685-9015704 | None:intergenic | 55.0% |
| ! | GGGAGTGACTGTGATGGTGA+CGG | + | chr3_2:9015688-9015707 | None:intergenic | 55.0% |
| CAGTCACTCCCTCATCTCTC+CGG | - | chr3_2:9015697-9015716 | Msa0394410:three_prime_UTR | 55.0% | |
| GAACGAAGACCGGAGAGATG+AGG | + | chr3_2:9015709-9015728 | None:intergenic | 55.0% | |
| ! | TGAGGAAGCACGGCCATGAA+GGG | + | chr3_2:9016524-9016543 | None:intergenic | 55.0% |
| AAATGTCCTACCCCTGGTGG+AGG | - | chr3_2:9017233-9017252 | Msa0394410:intron | 55.0% | |
| ! | TTTTCTCCTCCACCAGGGGT+AGG | + | chr3_2:9017242-9017261 | None:intergenic | 55.0% |
| GAGTGGGAACAGAGGTTGAG+CGG | - | chr3_2:9017639-9017658 | Msa0394410:intron | 55.0% | |
| TGAGCGGCAATGTCACCTTG+AGG | - | chr3_2:9017655-9017674 | Msa0394410:intron | 55.0% | |
| GAGCGGCAATGTCACCTTGA+GGG | - | chr3_2:9017656-9017675 | Msa0394410:intron | 55.0% | |
| GCAGTAATCTGCAGCCCTCA+AGG | + | chr3_2:9017673-9017692 | None:intergenic | 55.0% | |
| !! | AGGCATGTCGGAGCTCTGAA+GGG | - | chr3_2:9017700-9017719 | Msa0394410:intron | 55.0% |
| ACAGACCGACAGATCACACC+TGG | - | chr3_2:9017762-9017781 | Msa0394410:intron | 55.0% | |
| CGACAGATCACACCTGGATG+AGG | - | chr3_2:9017768-9017787 | Msa0394410:intron | 55.0% | |
| AGATCACACCTGGATGAGGG+CGG | - | chr3_2:9017772-9017791 | Msa0394410:intron | 55.0% | |
| ! | GGCAGTGCCCTGGTGTTTTA+TGG | + | chr3_2:9018004-9018023 | None:intergenic | 55.0% |
| !! | ATGTCTATGGTGGACTGCGG+TGG | + | chr3_2:9018067-9018086 | None:intergenic | 55.0% |
| ACCGAGTAAGATTGAGCGGC+AGG | - | chr3_2:9018138-9018157 | Msa0394410:intron | 55.0% | |
| AACATTCCTCCTGCAGCCAG+GGG | + | chr3_2:9019077-9019096 | None:intergenic | 55.0% | |
| AGTCCTCACCAACACCAAGC+TGG | - | chr3_2:9019654-9019673 | Msa0394410:intron | 55.0% | |
| AGTCCACAAGGTAGCTCGTC+TGG | - | chr3_2:9019680-9019699 | Msa0394410:intron | 55.0% | |
| AGACCAGACGAGCTACCTTG+TGG | + | chr3_2:9019686-9019705 | None:intergenic | 55.0% | |
| AACTTTGTCGGTCGCCTCCT+AGG | - | chr3_2:9019845-9019864 | Msa0394410:intron | 55.0% | |
| CCTGATCAAGACACGGCAGT+CGG | + | chr3_2:9019909-9019928 | None:intergenic | 55.0% | |
| CGACTGCCGTGTCTTGATCA+GGG | - | chr3_2:9019907-9019926 | Msa0394410:intron | 55.0% | |
| GACTGCCGTGTCTTGATCAG+GGG | - | chr3_2:9019908-9019927 | Msa0394410:intron | 55.0% | |
| GTATTTCACGCGCCTGCATC+AGG | + | chr3_2:9020310-9020329 | None:intergenic | 55.0% | |
| ! | CGAAGATTTGCTCAGGCCTG+TGG | - | chr3_2:9020331-9020350 | Msa0394410:intron | 55.0% |
| GATCAATGGCACTCTTCGCG+AGG | - | chr3_2:9020492-9020511 | Msa0394410:intron | 55.0% | |
| AATGGCACTCTTCGCGAGGA+GGG | - | chr3_2:9020496-9020515 | Msa0394410:intron | 55.0% | |
| GGGCGAAACAGAACCAGACA+TGG | + | chr3_2:9020527-9020546 | None:intergenic | 55.0% | |
| CAGTGCCTCGATCGCAGTTT+AGG | + | chr3_2:9020691-9020710 | None:intergenic | 55.0% | |
| CTAAACTGCGATCGAGGCAC+TGG | - | chr3_2:9020689-9020708 | Msa0394410:intron | 55.0% | |
| !! | ATCGAGGCACTGGCACCATA+GGG | - | chr3_2:9020699-9020718 | Msa0394410:intron | 55.0% |
| ATGATGTCTTCCTCCGGCGC+CGG | - | chr3_2:9015643-9015662 | Msa0394410:three_prime_UTR | 60.0% | |
| CGGGAAAGCCATGTACCTGC+CGG | + | chr3_2:9015665-9015684 | None:intergenic | 60.0% | |
| !! | GTGACTGTGATGGTGACGGC+GGG | + | chr3_2:9015684-9015703 | None:intergenic | 60.0% |
| ! | GTGAGGAAGCACGGCCATGA+AGG | + | chr3_2:9016525-9016544 | None:intergenic | 60.0% |
| ! | GAGGCATGTCGGAGCTCTGA+AGG | - | chr3_2:9017699-9017718 | Msa0394410:intron | 60.0% |
| CTGTTGTTCCGCCCTCATCC+AGG | + | chr3_2:9017783-9017802 | None:intergenic | 60.0% | |
| CTGGATGAGGGCGGAACAAC+AGG | - | chr3_2:9017781-9017800 | Msa0394410:intron | 60.0% | |
| CACATAAACCGGCAACCGGC+AGG | + | chr3_2:9018588-9018607 | None:intergenic | 60.0% | |
| GCTTGAACATGGTAGCCCCC+TGG | - | chr3_2:9019058-9019077 | Msa0394410:intron | 60.0% | |
| ACATTCCTCCTGCAGCCAGG+GGG | + | chr3_2:9019076-9019095 | None:intergenic | 60.0% | |
| !! | CAGCCAGCTTGGTGTTGGTG+AGG | + | chr3_2:9019660-9019679 | None:intergenic | 60.0% |
| !! | GGACTCAGCCAGCTTGGTGT+TGG | + | chr3_2:9019665-9019684 | None:intergenic | 60.0% |
| CCTTGTGGACTCAGCCAGCT+TGG | + | chr3_2:9019671-9019690 | None:intergenic | 60.0% | |
| CCAAGCTGGCTGAGTCCACA+AGG | - | chr3_2:9019668-9019687 | Msa0394410:intron | 60.0% | |
| AGTTTCCTCTCGGGCCTAGG+AGG | + | chr3_2:9019862-9019881 | None:intergenic | 60.0% | |
| GAGAGTTTCCTCTCGGGCCT+AGG | + | chr3_2:9019865-9019884 | None:intergenic | 60.0% | |
| CCGACTGCCGTGTCTTGATC+AGG | - | chr3_2:9019906-9019925 | Msa0394410:intron | 60.0% | |
| CGCGACCCCTGATCAAGACA+CGG | + | chr3_2:9019916-9019935 | None:intergenic | 60.0% | |
| CGTGTCTTGATCAGGGGTCG+CGG | - | chr3_2:9019914-9019933 | Msa0394410:intron | 60.0% | |
| CAATGGCACTCTTCGCGAGG+AGG | - | chr3_2:9020495-9020514 | Msa0394410:intron | 60.0% | |
| TCGCCCTTCCACAACAGCCT+TGG | - | chr3_2:9020541-9020560 | Msa0394410:intron | 60.0% | |
| !! | GATCGAGGCACTGGCACCAT+AGG | - | chr3_2:9020698-9020717 | Msa0394410:intron | 60.0% |
| TGCGAAGGATGGCAGTGCCC+TGG | + | chr3_2:9018014-9018033 | None:intergenic | 65.0% | |
| AGTTGAGGGAGAGGGGGAGG+AGG | + | chr3_2:9018325-9018344 | None:intergenic | 65.0% | |
| ! | GCAAGTTGAGGGAGAGGGGG+AGG | + | chr3_2:9018328-9018347 | None:intergenic | 65.0% |
| AGCCATGTACCTGCCGGCGC+CGG | + | chr3_2:9015659-9015678 | None:intergenic | 70.0% | |
| CATGGTAGCCCCCTGGCTGC+AGG | - | chr3_2:9019065-9019084 | Msa0394410:intron | 70.0% | |
| !! | TGTCTTCCTCCGGCGCCGGC+AGG | - | chr3_2:9015647-9015666 | Msa0394410:three_prime_UTR | 75.0% |
| ! | CATGTACCTGCCGGCGCCGG+AGG | + | chr3_2:9015656-9015675 | None:intergenic | 75.0% |
| !! | CTCCGGCGCCGGCAGGTACA+TGG | - | chr3_2:9015654-9015673 | Msa0394410:three_prime_UTR | 75.0% |
| GGTAGCCCCCTGGCTGCAGG+AGG | - | chr3_2:9019068-9019087 | Msa0394410:intron | 75.0% | |
| GGTCGCCTCCTAGGCCCGAG+AGG | - | chr3_2:9019854-9019873 | Msa0394410:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 9015522 | 9021056 | 9015522 | ID=Msa0394410;Name=Msa0394410 |
| chr3_2 | mRNA | 9015522 | 9021056 | 9015522 | ID=Msa0394410-mRNA-1;Parent=Msa0394410;Name=Msa0394410-mRNA-1;_AED=0.07;_eAED=0.07;_QI=121|1|1|1|1|1|7|465|293 |
| chr3_2 | exon | 9015522 | 9016136 | 9015522 | ID=Msa0394410-mRNA-1:exon:2393;Parent=Msa0394410-mRNA-1 |
| chr3_2 | exon | 9016226 | 9016369 | 9016226 | ID=Msa0394410-mRNA-1:exon:2392;Parent=Msa0394410-mRNA-1 |
| chr3_2 | exon | 9016620 | 9016736 | 9016620 | ID=Msa0394410-mRNA-1:exon:2391;Parent=Msa0394410-mRNA-1 |
| chr3_2 | exon | 9016821 | 9016940 | 9016821 | ID=Msa0394410-mRNA-1:exon:2390;Parent=Msa0394410-mRNA-1 |
| chr3_2 | exon | 9017430 | 9017575 | 9017430 | ID=Msa0394410-mRNA-1:exon:2389;Parent=Msa0394410-mRNA-1 |
| chr3_2 | exon | 9020012 | 9020097 | 9020012 | ID=Msa0394410-mRNA-1:exon:2388;Parent=Msa0394410-mRNA-1 |
| chr3_2 | exon | 9020817 | 9021056 | 9020817 | ID=Msa0394410-mRNA-1:exon:2387;Parent=Msa0394410-mRNA-1 |
| chr3_2 | five_prime_UTR | 9020936 | 9021056 | 9020936 | ID=Msa0394410-mRNA-1:five_prime_utr;Parent=Msa0394410-mRNA-1 |
| chr3_2 | CDS | 9020817 | 9020935 | 9020817 | ID=Msa0394410-mRNA-1:cds;Parent=Msa0394410-mRNA-1 |
| chr3_2 | CDS | 9020012 | 9020097 | 9020012 | ID=Msa0394410-mRNA-1:cds;Parent=Msa0394410-mRNA-1 |
| chr3_2 | CDS | 9017430 | 9017575 | 9017430 | ID=Msa0394410-mRNA-1:cds;Parent=Msa0394410-mRNA-1 |
| chr3_2 | CDS | 9016821 | 9016940 | 9016821 | ID=Msa0394410-mRNA-1:cds;Parent=Msa0394410-mRNA-1 |
| chr3_2 | CDS | 9016620 | 9016736 | 9016620 | ID=Msa0394410-mRNA-1:cds;Parent=Msa0394410-mRNA-1 |
| chr3_2 | CDS | 9016226 | 9016369 | 9016226 | ID=Msa0394410-mRNA-1:cds;Parent=Msa0394410-mRNA-1 |
| chr3_2 | CDS | 9015987 | 9016136 | 9015987 | ID=Msa0394410-mRNA-1:cds;Parent=Msa0394410-mRNA-1 |
| chr3_2 | three_prime_UTR | 9015522 | 9015986 | 9015522 | ID=Msa0394410-mRNA-1:three_prime_utr;Parent=Msa0394410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
