Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0495340 | XP_003600046.1 | 98.301 | 412 | 7 | 0 | 1 | 412 | 1 | 412 | 0.0 | 839 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0495340 | sp|O50046|TRPB_CAMAC | 89.196 | 398 | 43 | 0 | 15 | 412 | 69 | 466 | 0.0 | 750 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0495340 | G7IXJ6 | 98.301 | 412 | 7 | 0 | 1 | 412 | 1 | 412 | 0.0 | 839 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0495330 | Msa0495340 | 0.814166 | 1.769082e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0495340 | MtrunA17_Chr3g0098621 | 98.301 | 412 | 7 | 0 | 1 | 412 | 1 | 412 | 0.0 | 839 |
| Msa0495340 | MtrunA17_Chr3g0097941 | 90.571 | 403 | 38 | 0 | 10 | 412 | 64 | 466 | 0.0 | 772 |
| Msa0495340 | MtrunA17_Chr5g0394121 | 65.394 | 393 | 131 | 3 | 12 | 402 | 68 | 457 | 0.0 | 521 |
| Msa0495340 | MtrunA17_Chr6g0456431 | 30.831 | 373 | 210 | 13 | 67 | 411 | 124 | 476 | 1.42e-28 | 117 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0495340 | AT4G27070.1 | 87.940 | 398 | 48 | 0 | 15 | 412 | 78 | 475 | 0.0 | 749 |
| Msa0495340 | AT5G54810.1 | 87.688 | 398 | 49 | 0 | 15 | 412 | 73 | 470 | 0.0 | 744 |
| Msa0495340 | AT5G28237.1 | 65.261 | 403 | 134 | 2 | 9 | 408 | 58 | 457 | 0.0 | 554 |
| Msa0495340 | AT5G28237.2 | 64.183 | 349 | 119 | 2 | 9 | 354 | 58 | 403 | 2.11e-167 | 476 |
| Msa0495340 | AT5G38530.1 | 31.818 | 374 | 216 | 12 | 62 | 411 | 124 | 482 | 1.49e-29 | 120 |
Find 148 sgRNAs with CRISPR-Local
Find 398 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAGACAACACATTACATTT+TGG | 0.167440 | 3_4:+24480504 | Msa0495340:CDS |
| AGAGCATGGATGAGAGTTTC+AGG | 0.195377 | 3_4:-24478063 | None:intergenic |
| CCTCTTCTTCCCCAACTTCT+TGG | 0.234101 | 3_4:-24479772 | None:intergenic |
| GTTGGAATGTGTTGTTTATA+TGG | 0.236833 | 3_4:+24479860 | Msa0495340:CDS |
| GGCGCATTCTGAACACATTA+AGG | 0.259437 | 3_4:-24479908 | None:intergenic |
| CACTTGTGAAAGAATTCTTC+TGG | 0.259677 | 3_4:+24483408 | Msa0495340:three_prime_UTR |
| AACCGGTGTCGTTGTTGTTA+TGG | 0.292720 | 3_4:-24477978 | None:intergenic |
| ACGCTACATCGGAAGCTATA+AGG | 0.294070 | 3_4:+24480464 | Msa0495340:CDS |
| GAAAATTCCTAGGCATATAT+TGG | 0.297954 | 3_4:-24483452 | None:intergenic |
| CCCGATTCATTTGGCCGGTT+CGG | 0.324101 | 3_4:+24478018 | Msa0495340:CDS |
| TCTCTTACCATCATAGGATA+TGG | 0.329995 | 3_4:-24480547 | None:intergenic |
| TTGATTGGAGTGGAAGCTTC+TGG | 0.343516 | 3_4:+24480715 | Msa0495340:CDS |
| GACAATGATGTTAGGTTGAT+TGG | 0.357122 | 3_4:+24480700 | Msa0495340:CDS |
| AGAGAGTTTCATGCAGTGAT+AGG | 0.362237 | 3_4:+24480565 | Msa0495340:CDS |
| TTATATGGGTGCTCTAGATA+TGG | 0.362987 | 3_4:+24479875 | Msa0495340:CDS |
| GCTTTGCTTGCCAAGAAGTT+GGG | 0.367781 | 3_4:+24479762 | Msa0495340:CDS |
| GCCACCGTGTGCGCTCGGTT+TGG | 0.368576 | 3_4:+24479837 | Msa0495340:CDS |
| TTGGAATGTGTTGTTTATAT+GGG | 0.371672 | 3_4:+24479861 | Msa0495340:CDS |
| TTTGGCCGGTTCGGCCGGTT+TGG | 0.373394 | 3_4:+24478027 | Msa0495340:CDS |
| CATTGTCATCAATAAATTCA+TGG | 0.377221 | 3_4:-24480684 | None:intergenic |
| TGCCTCCAAACCGGCCGAAC+CGG | 0.381392 | 3_4:-24478032 | None:intergenic |
| TGAAACTCTCTTACCATCAT+AGG | 0.388518 | 3_4:-24480553 | None:intergenic |
| GGAAGGCATAATTCCAGCTT+TGG | 0.390156 | 3_4:+24483149 | Msa0495340:CDS |
| CGGCATGCTTGCCACTTTCA+AGG | 0.390728 | 3_4:-24480744 | None:intergenic |
| CCACCGTGTGCGCTCGGTTT+GGG | 0.391099 | 3_4:+24479838 | Msa0495340:CDS |
| CTGGAATTATGCCTTCCAAC+TGG | 0.392476 | 3_4:-24483143 | None:intergenic |
| ACCACAACCTTAGTTCCATT+TGG | 0.393747 | 3_4:-24483219 | None:intergenic |
| GTGTTCAGAATGCGCCTTCT+TGG | 0.395625 | 3_4:+24479915 | Msa0495340:CDS |
| ACACATGCTACTAGAATATC+TGG | 0.397041 | 3_4:-24480631 | None:intergenic |
| GCCGAACCGGCCAAATGAAT+CGG | 0.397829 | 3_4:-24478019 | None:intergenic |
| CGCTACATCGGAAGCTATAA+GGG | 0.408523 | 3_4:+24480465 | Msa0495340:CDS |
| TTGTATAGGTTGGACTATCC+AGG | 0.411873 | 3_4:+24480952 | Msa0495340:intron |
| GGCTTTGCTTGCCAAGAAGT+TGG | 0.415062 | 3_4:+24479761 | Msa0495340:CDS |
| TCTCAGCGACCCGATTCATT+TGG | 0.416247 | 3_4:+24478009 | Msa0495340:CDS |
| CTTCTCCTTTCCTCTTCCAA+TGG | 0.418006 | 3_4:+24477951 | Msa0495340:exon |
| GGCCGGTTCGGCCGGTTTGG+AGG | 0.421831 | 3_4:+24478030 | Msa0495340:CDS |
| TTATTGATGACAATGATGTT+AGG | 0.431139 | 3_4:+24480692 | Msa0495340:CDS |
| CTGCAGTGGTAGAGGGGATA+AGG | 0.435553 | 3_4:+24483245 | Msa0495340:CDS |
| ATCTCAATAAGAAAAGAAAA+AGG | 0.437338 | 3_4:-24483354 | None:intergenic |
| CATAGTTTCTTGAGAGATGC+AGG | 0.443096 | 3_4:+24480988 | Msa0495340:CDS |
| ATTCATTTGGCCGGTTCGGC+CGG | 0.443209 | 3_4:+24478022 | Msa0495340:CDS |
| GAGACTGGTGCTGGTCAACA+TGG | 0.446439 | 3_4:+24479804 | Msa0495340:CDS |
| CATCGGAAGCTATAAGGGAT+TGG | 0.447133 | 3_4:+24480470 | Msa0495340:CDS |
| GCATGTGATGTTTCCAAAGC+TGG | 0.447135 | 3_4:-24483162 | None:intergenic |
| CTCTGCCCTACCCTTCCAAA+TGG | 0.447885 | 3_4:+24483204 | Msa0495340:CDS |
| GGAGTGGAAGCTTCTGGACT+AGG | 0.450561 | 3_4:+24480721 | Msa0495340:CDS |
| ACTTGTGAAAGAATTCTTCT+GGG | 0.455338 | 3_4:+24483409 | Msa0495340:three_prime_UTR |
| AAATCTAATGAGGCAAAGAT+AGG | 0.457929 | 3_4:-24483617 | None:intergenic |
| GATCAATAACGCTGTCGCTC+AGG | 0.464928 | 3_4:+24479740 | Msa0495340:CDS |
| CGTGTGCGCTCGGTTTGGGT+TGG | 0.467425 | 3_4:+24479842 | Msa0495340:CDS |
| TGCTCTAGATATGGAAAGAC+AGG | 0.471872 | 3_4:+24479884 | Msa0495340:CDS |
| ATCGGAAGCTATAAGGGATT+GGG | 0.473125 | 3_4:+24480471 | Msa0495340:CDS |
| TACCCTTCCAAATGGAACTA+AGG | 0.476426 | 3_4:+24483212 | Msa0495340:CDS |
| GAACCTCATTCTATCAGTGC+AGG | 0.477608 | 3_4:+24480847 | Msa0495340:CDS |
| TAACAACAACGACACCGGTT+CGG | 0.481988 | 3_4:+24477981 | Msa0495340:CDS |
| CTATGCTCCGGTCCAACCCC+TGG | 0.482187 | 3_4:-24480970 | None:intergenic |
| GTGGTTAACTGCAGTGGTAG+AGG | 0.485885 | 3_4:+24483237 | Msa0495340:CDS |
| CCGAACCGGCCAAATGAATC+GGG | 0.491097 | 3_4:-24478018 | None:intergenic |
| TTGGAAACCAATATATGCCT+AGG | 0.493682 | 3_4:+24483445 | Msa0495340:three_prime_UTR |
| CTTGATCTGAAGCAAGGGAA+TGG | 0.494427 | 3_4:-24478107 | None:intergenic |
| TGTGAAGTTGACTGAGTTTG+AGG | 0.498512 | 3_4:+24483380 | Msa0495340:three_prime_UTR |
| CCACTGCCACCGTGTGCGCT+CGG | 0.502454 | 3_4:+24479832 | Msa0495340:CDS |
| CAACCTTAGTTCCATTTGGA+AGG | 0.503155 | 3_4:-24483215 | None:intergenic |
| GCGCATTCTGAACACATTAA+GGG | 0.507369 | 3_4:-24479907 | None:intergenic |
| TTAGTTCCATTTGGAAGGGT+AGG | 0.508332 | 3_4:-24483210 | None:intergenic |
| CCGAGCGCACACGGTGGCAG+TGG | 0.509221 | 3_4:-24479832 | None:intergenic |
| TTATGGTTCTCCATTGGAAG+AGG | 0.513320 | 3_4:-24477961 | None:intergenic |
| GGACTATCCAGGGGTTGGAC+CGG | 0.514577 | 3_4:+24480963 | Msa0495340:CDS |
| GGAAAGGAGAAGAAGAAAAG+TGG | 0.517656 | 3_4:-24477940 | None:intergenic |
| GAAAATCTTGATCTGAAGCA+AGG | 0.518407 | 3_4:-24478113 | None:intergenic |
| GGACATACTTGCCTCCAAAC+CGG | 0.518644 | 3_4:-24478041 | None:intergenic |
| TCGCTGAGATTGAACCGAAC+CGG | 0.519753 | 3_4:-24477995 | None:intergenic |
| TTGTTGTTATGGTTCTCCAT+TGG | 0.525377 | 3_4:-24477967 | None:intergenic |
| ACAACATCTAGAAAATTCCT+AGG | 0.529483 | 3_4:-24483462 | None:intergenic |
| TAGTTCCATTTGGAAGGGTA+GGG | 0.530426 | 3_4:-24483209 | None:intergenic |
| GTTATTGCTGAGACTGGTGC+TGG | 0.531555 | 3_4:+24479795 | Msa0495340:CDS |
| AAGAGGGTTATTGCTGAGAC+TGG | 0.533813 | 3_4:+24479789 | Msa0495340:CDS |
| AGACTGGTGCTGGTCAACAT+GGG | 0.533920 | 3_4:+24479805 | Msa0495340:CDS |
| CAATTATTACAAGGCATCAA+AGG | 0.533920 | 3_4:+24483487 | Msa0495340:three_prime_UTR |
| TGGTTAACTGCAGTGGTAGA+GGG | 0.534156 | 3_4:+24483238 | Msa0495340:CDS |
| GAGCACTACAAGCATGGTAA+TGG | 0.534256 | 3_4:+24479660 | Msa0495340:CDS |
| CATGCCGCTACGTTAACAAA+AGG | 0.534438 | 3_4:+24480760 | Msa0495340:CDS |
| AGAAACAAGAAAGCAAGCAT+TGG | 0.537869 | 3_4:+24480591 | Msa0495340:CDS |
| AGCGACCCGATTCATTTGGC+CGG | 0.540989 | 3_4:+24478013 | Msa0495340:CDS |
| CTTTGCTTGCCAAGAAGTTG+GGG | 0.542568 | 3_4:+24479763 | Msa0495340:CDS |
| TCCAAATGGAACTAAGGTTG+TGG | 0.543503 | 3_4:+24483218 | Msa0495340:CDS |
| TGTATAGGTTGGACTATCCA+GGG | 0.543512 | 3_4:+24480953 | Msa0495340:intron |
| GGCGGTGGTTCAAATGCCAT+TGG | 0.543912 | 3_4:+24480655 | Msa0495340:CDS |
| CAACCCAAACCGAGCGCACA+CGG | 0.544755 | 3_4:-24479841 | None:intergenic |
| TTCTGAGGGACTATGTAGGT+AGG | 0.547837 | 3_4:+24479604 | Msa0495340:CDS |
| CTAGTAGCATGTGTTGGCGG+TGG | 0.548237 | 3_4:+24480640 | Msa0495340:CDS |
| TACAAGCATGGTAATGGTGA+AGG | 0.548461 | 3_4:+24479666 | Msa0495340:CDS |
| AAAATCTTGATCTGAAGCAA+GGG | 0.548836 | 3_4:-24478112 | None:intergenic |
| CCAAGAAGTTGGGGAAGAAG+AGG | 0.548869 | 3_4:+24479772 | Msa0495340:CDS |
| AGCCTCTCAGCAAAGTAAAG+AGG | 0.549430 | 3_4:-24479633 | None:intergenic |
| GGCCACACATATATCTAAAG+AGG | 0.550075 | 3_4:+24479688 | Msa0495340:CDS |
| CTTCTAGCTCAGTGAGAGCA+TGG | 0.550223 | 3_4:-24478077 | None:intergenic |
| TGGAATTATGCCTTCCAACT+GGG | 0.554632 | 3_4:-24483142 | None:intergenic |
| TAACAAAACAAAATCTAATG+AGG | 0.556778 | 3_4:-24483627 | None:intergenic |
| GCCCTCTTTACTTTGCTGAG+AGG | 0.557166 | 3_4:+24479631 | Msa0495340:CDS |
| AAGAGCTAGCTGGGGTTCTG+AGG | 0.557320 | 3_4:+24479589 | Msa0495340:CDS |
| GAGAGTTTCATGCAGTGATA+GGG | 0.558758 | 3_4:+24480566 | Msa0495340:CDS |
| AAGAGAGTATCCCAGTTGGA+AGG | 0.562559 | 3_4:+24483132 | Msa0495340:CDS |
| GCCACATCCATATCCTATGA+TGG | 0.564966 | 3_4:+24480540 | Msa0495340:CDS |
| AGAGCTAGCTGGGGTTCTGA+GGG | 0.567779 | 3_4:+24479590 | Msa0495340:CDS |
| ATGTTGTTACAATTATTACA+AGG | 0.569326 | 3_4:+24483478 | Msa0495340:three_prime_UTR |
| GAGCATGGATGAGAGTTTCA+GGG | 0.571006 | 3_4:-24478062 | None:intergenic |
| GCCTCTCAGCAAAGTAAAGA+GGG | 0.574214 | 3_4:-24479632 | None:intergenic |
| CACATACCTCAGCACCAAGA+AGG | 0.577652 | 3_4:-24479929 | None:intergenic |
| AAGGGATTGGGTGACTAATG+TGG | 0.577880 | 3_4:+24480483 | Msa0495340:CDS |
| CAAGAAGTTGGGGAAGAAGA+GGG | 0.578771 | 3_4:+24479773 | Msa0495340:CDS |
| TGCTGAATACTACAGTGTTA+CGG | 0.584106 | 3_4:+24481014 | Msa0495340:CDS |
| AACCTTAGTTCCATTTGGAA+GGG | 0.584611 | 3_4:-24483214 | None:intergenic |
| TACCCTGCACTGATAGAATG+AGG | 0.584616 | 3_4:-24480850 | None:intergenic |
| TACGCTGAAAGACGCTACAT+CGG | 0.585234 | 3_4:+24480453 | Msa0495340:CDS |
| TAGGTGAGAGCTGTACATGC+AGG | 0.586790 | 3_4:+24480424 | Msa0495340:intron |
| TGATGTTAGGTTGATTGGAG+TGG | 0.587033 | 3_4:+24480705 | Msa0495340:CDS |
| ACGTTAACAAAAGGAGAAGT+CGG | 0.599467 | 3_4:+24480769 | Msa0495340:CDS |
| AGGTTGGACTATCCAGGGGT+TGG | 0.602541 | 3_4:+24480958 | Msa0495340:intron |
| GACTGGTGCTGGTCAACATG+GGG | 0.604038 | 3_4:+24479806 | Msa0495340:CDS |
| GCTGAACTGTTCAACTACGC+TGG | 0.605718 | 3_4:-24483321 | None:intergenic |
| TCTCTCAAGAAACTATGCTC+CGG | 0.606203 | 3_4:-24480982 | None:intergenic |
| ATTCTAGTAGCATGTGTTGG+CGG | 0.607534 | 3_4:+24480637 | Msa0495340:CDS |
| ACCATCATAGGATATGGATG+TGG | 0.610205 | 3_4:-24480541 | None:intergenic |
| AATGCGCCTTCTTGGTGCTG+AGG | 0.615279 | 3_4:+24479923 | Msa0495340:CDS |
| TCTGAGGGACTATGTAGGTA+GGG | 0.616514 | 3_4:+24479605 | Msa0495340:CDS |
| GGGGTTCTGAGGGACTATGT+AGG | 0.619682 | 3_4:+24479600 | Msa0495340:CDS |
| ACAAGCATGGTAATGGTGAA+GGG | 0.620915 | 3_4:+24479667 | Msa0495340:CDS |
| GTTCTCCATTGGAAGAGGAA+AGG | 0.621485 | 3_4:-24477956 | None:intergenic |
| GATATTCTAGTAGCATGTGT+TGG | 0.622400 | 3_4:+24480634 | Msa0495340:CDS |
| AACCTCATTCTATCAGTGCA+GGG | 0.622671 | 3_4:+24480848 | Msa0495340:CDS |
| AAGGTTGTGGTTAACTGCAG+TGG | 0.622726 | 3_4:+24483231 | Msa0495340:CDS |
| TCTGGACTAGGCCTTGAAAG+TGG | 0.628959 | 3_4:+24480733 | Msa0495340:CDS |
| AAATTCATGGAAAAGACCAA+TGG | 0.629623 | 3_4:-24480671 | None:intergenic |
| CTGACAGAGCACTACAAGCA+TGG | 0.630025 | 3_4:+24479654 | Msa0495340:CDS |
| AACCATAACAACAACGACAC+CGG | 0.630926 | 3_4:+24477976 | Msa0495340:CDS |
| GCCACACATATATCTAAAGA+GGG | 0.631401 | 3_4:+24479689 | Msa0495340:CDS |
| TCCCTCTTTAGATATATGTG+TGG | 0.649235 | 3_4:-24479690 | None:intergenic |
| GGTTAACTGCAGTGGTAGAG+GGG | 0.650282 | 3_4:+24483239 | Msa0495340:CDS |
| ATAGTTTCTTGAGAGATGCA+GGG | 0.654486 | 3_4:+24480989 | Msa0495340:CDS |
| GTATAGGTTGGACTATCCAG+GGG | 0.658334 | 3_4:+24480954 | Msa0495340:intron |
| AGGGAGGATCTCAACCACAC+TGG | 0.676349 | 3_4:+24479708 | Msa0495340:CDS |
| TGATCTTGTGAGCGCCAGTG+TGG | 0.691274 | 3_4:-24479722 | None:intergenic |
| ACACATATATCTAAAGAGGG+AGG | 0.694405 | 3_4:+24479692 | Msa0495340:CDS |
| GAAGTTGACTGAGTTTGAGG+AGG | 0.700210 | 3_4:+24483383 | Msa0495340:three_prime_UTR |
| ACGGACGAAGAAGCACTCGA+AGG | 0.702904 | 3_4:+24481033 | Msa0495340:CDS |
| TTTGCAGAAAGAGCTAGCTG+GGG | 0.719660 | 3_4:+24479581 | Msa0495340:intron |
| CCCAAACCGAGCGCACACGG+TGG | 0.745249 | 3_4:-24479838 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATATTTTTTTATACAAAAG+TGG | - | chr3_4:24479056-24479075 | None:intergenic | 10.0% |
| !!! | AGTATTATTTTCAAATTTTT+AGG | - | chr3_4:24481350-24481369 | None:intergenic | 10.0% |
| !! | TTGAAAATTCTTTATTAATT+TGG | + | chr3_4:24482959-24482978 | Msa0495340:intron | 10.0% |
| !!! | ATGTTGATTTGTTAAATAAA+AGG | - | chr3_4:24478837-24478856 | None:intergenic | 15.0% |
| !! | ATAAAATTACTACTATTCTT+AGG | + | chr3_4:24479118-24479137 | Msa0495340:intron | 15.0% |
| !! | TAAAATTACTACTATTCTTA+GGG | + | chr3_4:24479119-24479138 | Msa0495340:intron | 15.0% |
| !! | ATACAAGTTAAAAGAAAATT+CGG | + | chr3_4:24479204-24479223 | Msa0495340:intron | 15.0% |
| !!! | TTTAGTATAAACTTTGTTTT+TGG | + | chr3_4:24480273-24480292 | Msa0495340:intron | 15.0% |
| !!! | ATTTTTTTTGTTAAAGGATT+TGG | - | chr3_4:24481146-24481165 | None:intergenic | 15.0% |
| !!! | TGAGTTATATGAATTTTTTA+AGG | + | chr3_4:24482169-24482188 | Msa0495340:intron | 15.0% |
| !! | CACCTAATATAAAAATAAAT+TGG | - | chr3_4:24482911-24482930 | None:intergenic | 15.0% |
| !!! | ATTAATTTGGAAAGAAAATA+AGG | + | chr3_4:24482972-24482991 | Msa0495340:intron | 15.0% |
| !! | ATTTGAAAAATAAAATAGCA+TGG | + | chr3_4:24483526-24483545 | Msa0495340:three_prime_UTR | 15.0% |
| !!! | GTAATTTTGAGGAATTTAAA+GGG | - | chr3_4:24477913-24477932 | None:intergenic | 20.0% |
| !!! | TGTAATTTTGAGGAATTTAA+AGG | - | chr3_4:24477914-24477933 | None:intergenic | 20.0% |
| !!! | ATTAATAAGTCATTTTGGAA+TGG | - | chr3_4:24478174-24478193 | None:intergenic | 20.0% |
| !!! | AAGCTATTAATAAGTCATTT+TGG | - | chr3_4:24478179-24478198 | None:intergenic | 20.0% |
| !! | TTTGTTAAATAAAAGGCAAA+AGG | - | chr3_4:24478830-24478849 | None:intergenic | 20.0% |
| !! | TTAAGTGAACATAAGATATA+AGG | - | chr3_4:24478884-24478903 | None:intergenic | 20.0% |
| !! | CTAAAAATTAATGATGACAA+TGG | + | chr3_4:24479158-24479177 | Msa0495340:intron | 20.0% |
| !! | ATAAGTCAAATAATGTCATT+AGG | - | chr3_4:24480304-24480323 | None:intergenic | 20.0% |
| !! | TAATTCATCTTGTTGATATT+TGG | + | chr3_4:24480871-24480890 | Msa0495340:intron | 20.0% |
| !! | TGAAAATGGAATATCAAATA+TGG | - | chr3_4:24480919-24480938 | None:intergenic | 20.0% |
| !! | ATGAAAACAAGAAATGAAAA+TGG | - | chr3_4:24480933-24480952 | None:intergenic | 20.0% |
| !!! | ATTTCTTGTTTTCATTGTAT+AGG | + | chr3_4:24480938-24480957 | Msa0495340:intron | 20.0% |
| !! | TACATTTGGCAATTAATATA+GGG | - | chr3_4:24481066-24481085 | None:intergenic | 20.0% |
| !! | TAAACATATGATTGTACATT+TGG | - | chr3_4:24481080-24481099 | None:intergenic | 20.0% |
| !! | AATACTAATCGTAAAATCAT+AGG | - | chr3_4:24482033-24482052 | None:intergenic | 20.0% |
| !! | TGGAATAACATTTACAAAAA+TGG | - | chr3_4:24482327-24482346 | None:intergenic | 20.0% |
| !! | TTATTCCATTATTCTTAATC+TGG | + | chr3_4:24482339-24482358 | Msa0495340:intron | 20.0% |
| !! | ATTGCTATATATTTAGCATT+TGG | + | chr3_4:24482381-24482400 | Msa0495340:intron | 20.0% |
| !!! | AGCATTATTTTTTACAATGT+TGG | + | chr3_4:24482533-24482552 | Msa0495340:intron | 20.0% |
| !!! | GGCCAATTTATTTTTATATT+AGG | + | chr3_4:24482906-24482925 | Msa0495340:intron | 20.0% |
| !!! | TTATGTTATTTCATTTTCCA+AGG | + | chr3_4:24483052-24483071 | Msa0495340:intron | 20.0% |
| !! | ATCTCAATAAGAAAAGAAAA+AGG | - | chr3_4:24483357-24483376 | None:intergenic | 20.0% |
| !! | ATGTTGTTACAATTATTACA+AGG | + | chr3_4:24483478-24483497 | Msa0495340:three_prime_UTR | 20.0% |
| !! | TAACAAAACAAAATCTAATG+AGG | - | chr3_4:24483630-24483649 | None:intergenic | 20.0% |
| ! | AAAAAGTGAAAGAGAAAGAA+CGG | - | chr3_4:24478144-24478163 | None:intergenic | 25.0% |
| !! | ATGAAGTTTCTGAATTTTGA+AGG | + | chr3_4:24478217-24478236 | Msa0495340:intron | 25.0% |
| ! | AAAATAAGCTGAAAACAACT+TGG | + | chr3_4:24478371-24478390 | Msa0495340:intron | 25.0% |
| ! | AAATAAGCTGAAAACAACTT+GGG | + | chr3_4:24478372-24478391 | Msa0495340:intron | 25.0% |
| ! | TAAGCTGTGTTTATTAAAAC+AGG | + | chr3_4:24478586-24478605 | Msa0495340:intron | 25.0% |
| ! | AAGCTGTGTTTATTAAAACA+GGG | + | chr3_4:24478587-24478606 | Msa0495340:intron | 25.0% |
| ! | TAAATAAAAGGCAAAAGGTA+TGG | - | chr3_4:24478825-24478844 | None:intergenic | 25.0% |
| ! | TTATTACTTGAACAAGTGTT+TGG | + | chr3_4:24479081-24479100 | Msa0495340:intron | 25.0% |
| ! | AATCAAAAGCAACTAAACAA+AGG | - | chr3_4:24479480-24479499 | None:intergenic | 25.0% |
| ! | TTTGTGAATAAAACTCAAGT+TGG | + | chr3_4:24479527-24479546 | Msa0495340:intron | 25.0% |
| !!! | TTGGAATGTGTTGTTTATAT+GGG | + | chr3_4:24479861-24479880 | Msa0495340:CDS | 25.0% |
| ! | CAATTTCAATTCATCAAAGT+TGG | - | chr3_4:24480168-24480187 | None:intergenic | 25.0% |
| ! | CAACTTTGATGAATTGAAAT+TGG | + | chr3_4:24480166-24480185 | Msa0495340:intron | 25.0% |
| ! | GATGAATTGAAATTGGAAAT+AGG | + | chr3_4:24480173-24480192 | Msa0495340:intron | 25.0% |
| !! | ATTACATACTTTTGTGATGT+AGG | + | chr3_4:24480405-24480424 | Msa0495340:intron | 25.0% |
| ! | CATTGTCATCAATAAATTCA+TGG | - | chr3_4:24480687-24480706 | None:intergenic | 25.0% |
| !! | TTATTGATGACAATGATGTT+AGG | + | chr3_4:24480692-24480711 | Msa0495340:CDS | 25.0% |
| ! | GTACATTTGGCAATTAATAT+AGG | - | chr3_4:24481067-24481086 | None:intergenic | 25.0% |
| ! | GTAATTGCACAACTAAAATT+TGG | - | chr3_4:24481116-24481135 | None:intergenic | 25.0% |
| !! | ATTGAGATTTTGCTTAAGAT+CGG | + | chr3_4:24481236-24481255 | Msa0495340:intron | 25.0% |
| ! | ACAATTAATTACGTAGGATT+GGG | + | chr3_4:24481303-24481322 | Msa0495340:intron | 25.0% |
| !!! | GCTTTAAGTATTTTCTGTTA+TGG | - | chr3_4:24481477-24481496 | None:intergenic | 25.0% |
| !!! | TTTCTATGTTTTTTTCCAAC+TGG | + | chr3_4:24481648-24481667 | Msa0495340:intron | 25.0% |
| !!! | TTCTATGTTTTTTTCCAACT+GGG | + | chr3_4:24481649-24481668 | Msa0495340:intron | 25.0% |
| ! | ATTATGGGATAAAAAGAATC+AGG | - | chr3_4:24481684-24481703 | None:intergenic | 25.0% |
| !!! | TCAAGAATCGTGTATTTTTA+AGG | + | chr3_4:24481714-24481733 | Msa0495340:intron | 25.0% |
| !! | TATGATTTAACTCACGATTT+TGG | + | chr3_4:24481842-24481861 | Msa0495340:intron | 25.0% |
| ! | ACAAAAATGGATGTTGAATA+TGG | - | chr3_4:24482314-24482333 | None:intergenic | 25.0% |
| ! | AAACACCAGATTAAGAATAA+TGG | - | chr3_4:24482347-24482366 | None:intergenic | 25.0% |
| !! | ATATCTTGCTATGATGTTAT+AGG | + | chr3_4:24482431-24482450 | Msa0495340:intron | 25.0% |
| ! | TTTCCTCATTCAAATTTGAT+AGG | - | chr3_4:24482459-24482478 | None:intergenic | 25.0% |
| !! | ACTAATACTGATGTTTGTTA+AGG | - | chr3_4:24482498-24482517 | None:intergenic | 25.0% |
| ! | TCCAGGATAATTTATGAAAA+CGG | + | chr3_4:24482740-24482759 | Msa0495340:intron | 25.0% |
| ! | ATTGAGTTATTTATCCAAAC+AGG | + | chr3_4:24482866-24482885 | Msa0495340:intron | 25.0% |
| ! | TTGAGTTATTTATCCAAACA+GGG | + | chr3_4:24482867-24482886 | Msa0495340:intron | 25.0% |
| ! | TTTCTGTATGTGATGATAAA+TGG | - | chr3_4:24483026-24483045 | None:intergenic | 25.0% |
| !!! | GTGGTTAGTTTGTAATTTTG+AGG | - | chr3_4:24477924-24477943 | None:intergenic | 30.0% |
| ! | AAAATCTTGATCTGAAGCAA+GGG | - | chr3_4:24478115-24478134 | None:intergenic | 30.0% |
| !! | TTTCTGAATTTTGAAGGAAG+TGG | + | chr3_4:24478223-24478242 | Msa0495340:intron | 30.0% |
| !! | ATAAGTTTTGTGAGACTGTT+TGG | + | chr3_4:24478433-24478452 | Msa0495340:intron | 30.0% |
| !! | TAAGTTTTGTGAGACTGTTT+GGG | + | chr3_4:24478434-24478453 | Msa0495340:intron | 30.0% |
| ! | GTTTATTAAAACAGGGCTTT+TGG | + | chr3_4:24478594-24478613 | Msa0495340:intron | 30.0% |
| TCTCACTCATAAAAATGAGT+AGG | + | chr3_4:24478728-24478747 | Msa0495340:intron | 30.0% | |
| TACTCATACTTGTATACTTC+TGG | - | chr3_4:24479252-24479271 | None:intergenic | 30.0% | |
| TGTCTGTTTGGCAAAAATAA+GGG | - | chr3_4:24479327-24479346 | None:intergenic | 30.0% | |
| ATGTCTGTTTGGCAAAAATA+AGG | - | chr3_4:24479328-24479347 | None:intergenic | 30.0% | |
| !! | CGTCTTATTTAATGTCTGTT+TGG | - | chr3_4:24479339-24479358 | None:intergenic | 30.0% |
| !! | GTTGGAATGTGTTGTTTATA+TGG | + | chr3_4:24479860-24479879 | Msa0495340:CDS | 30.0% |
| AACAATAAGTATCAAGCATC+AGG | - | chr3_4:24480059-24480078 | None:intergenic | 30.0% | |
| ATTGAAATTGGAAATAGGCA+CGG | + | chr3_4:24480178-24480197 | Msa0495340:intron | 30.0% | |
| ! | AAGGTTTCTTTTGTAAATGC+AGG | + | chr3_4:24480204-24480223 | Msa0495340:intron | 30.0% |
| ! | AGGTTTCTTTTGTAAATGCA+GGG | + | chr3_4:24480205-24480224 | Msa0495340:intron | 30.0% |
| ! | GAGACAACACATTACATTTT+GGG | + | chr3_4:24480505-24480524 | Msa0495340:CDS | 30.0% |
| !!! | AACACATTACATTTTGGGTT+CGG | + | chr3_4:24480510-24480529 | Msa0495340:CDS | 30.0% |
| !! | AAAGCAAGCATTGGAAAAAT+GGG | + | chr3_4:24480600-24480619 | Msa0495340:CDS | 30.0% |
| AAATTCATGGAAAAGACCAA+TGG | - | chr3_4:24480674-24480693 | None:intergenic | 30.0% | |
| ATGGATAGACAACAAGAAAA+TGG | - | chr3_4:24480900-24480919 | None:intergenic | 30.0% | |
| !! | CTTGTTTTCATTGTATAGGT+TGG | + | chr3_4:24480942-24480961 | Msa0495340:intron | 30.0% |
| ! | TTGAGATTTTGCTTAAGATC+GGG | + | chr3_4:24481237-24481256 | Msa0495340:intron | 30.0% |
| TCCTACACAATTAATTACGT+AGG | + | chr3_4:24481297-24481316 | Msa0495340:intron | 30.0% | |
| TCCTACGTAATTAATTGTGT+AGG | - | chr3_4:24481301-24481320 | None:intergenic | 30.0% | |
| CACAATTAATTACGTAGGAT+TGG | + | chr3_4:24481302-24481321 | Msa0495340:intron | 30.0% | |
| !! | AGTAGTTTATTTAGTGGACT+TGG | - | chr3_4:24481422-24481441 | None:intergenic | 30.0% |
| ! | AGTATTTTCTGTTATGGACT+TGG | - | chr3_4:24481471-24481490 | None:intergenic | 30.0% |
| TAATCTTATGGAGGATGATA+TGG | - | chr3_4:24481529-24481548 | None:intergenic | 30.0% | |
| ATAGAAAACCTTAAACGCAA+AGG | - | chr3_4:24481635-24481654 | None:intergenic | 30.0% | |
| CTTGAGTCTTGCTTAATTAT+GGG | - | chr3_4:24481699-24481718 | None:intergenic | 30.0% | |
| TCTTGAGTCTTGCTTAATTA+TGG | - | chr3_4:24481700-24481719 | None:intergenic | 30.0% | |
| !!! | ATCGTGTATTTTTAAGGTCT+AGG | + | chr3_4:24481720-24481739 | Msa0495340:intron | 30.0% |
| ATCTAACATTGATACCTGAT+GGG | - | chr3_4:24481906-24481925 | None:intergenic | 30.0% | |
| AGGTATCAATGTTAGATGAA+TGG | + | chr3_4:24481909-24481928 | Msa0495340:intron | 30.0% | |
| GGTATCAATGTTAGATGAAT+GGG | + | chr3_4:24481910-24481929 | Msa0495340:intron | 30.0% | |
| !!! | TTTGTTTTTTCTCAGACTTC+AGG | - | chr3_4:24481954-24481973 | None:intergenic | 30.0% |
| TCTACAAGGTATAACTATTG+TGG | + | chr3_4:24482265-24482284 | Msa0495340:intron | 30.0% | |
| CTTTATGGCTTATTCAAAGT+CGG | + | chr3_4:24482580-24482599 | Msa0495340:intron | 30.0% | |
| ATTCAAAGTCGGAGATTAAT+AGG | + | chr3_4:24482591-24482610 | Msa0495340:intron | 30.0% | |
| TTCAAAGTCGGAGATTAATA+GGG | + | chr3_4:24482592-24482611 | Msa0495340:intron | 30.0% | |
| AATAAGCTGAAAACAGCTTA+TGG | - | chr3_4:24482709-24482728 | None:intergenic | 30.0% | |
| ! | TTTTATATTAGGTGTGTGCA+AGG | + | chr3_4:24482917-24482936 | Msa0495340:intron | 30.0% |
| ACTTGTGAAAGAATTCTTCT+GGG | + | chr3_4:24483409-24483428 | Msa0495340:three_prime_UTR | 30.0% | |
| GAAAATTCCTAGGCATATAT+TGG | - | chr3_4:24483455-24483474 | None:intergenic | 30.0% | |
| ACAACATCTAGAAAATTCCT+AGG | - | chr3_4:24483465-24483484 | None:intergenic | 30.0% | |
| ! | CAATTATTACAAGGCATCAA+AGG | + | chr3_4:24483487-24483506 | Msa0495340:three_prime_UTR | 30.0% |
| AAATCTAATGAGGCAAAGAT+AGG | - | chr3_4:24483620-24483639 | None:intergenic | 30.0% | |
| ! | TTGTTGTTATGGTTCTCCAT+TGG | - | chr3_4:24477970-24477989 | None:intergenic | 35.0% |
| ! | GAAAATCTTGATCTGAAGCA+AGG | - | chr3_4:24478116-24478135 | None:intergenic | 35.0% |
| ! | TGCTTCAGATCAAGATTTTC+AGG | + | chr3_4:24478116-24478135 | Msa0495340:CDS | 35.0% |
| !! | ATTTTGAAGGAAGTGGTTAG+TGG | + | chr3_4:24478230-24478249 | Msa0495340:intron | 35.0% |
| !! | TTTTGAAGGAAGTGGTTAGT+GGG | + | chr3_4:24478231-24478250 | Msa0495340:intron | 35.0% |
| ACCATGAATCATCGTTGTTT+CGG | + | chr3_4:24478777-24478796 | Msa0495340:intron | 35.0% | |
| TGTTCTTGATGCATCGTTTA+AGG | + | chr3_4:24479018-24479037 | Msa0495340:intron | 35.0% | |
| GTCTGTTTGGCAAAAATAAG+GGG | - | chr3_4:24479326-24479345 | None:intergenic | 35.0% | |
| !! | TTTTGATTCTCGAAACCCAT+TGG | + | chr3_4:24479492-24479511 | Msa0495340:intron | 35.0% |
| TTTGATTCTCGAAACCCATT+GGG | + | chr3_4:24479493-24479512 | Msa0495340:intron | 35.0% | |
| AAAAACTGAATCACCCCAAT+GGG | - | chr3_4:24479510-24479529 | None:intergenic | 35.0% | |
| !! | AAACTCAAGTTGGTATCTTC+AGG | + | chr3_4:24479537-24479556 | Msa0495340:intron | 35.0% |
| !! | AACTCAAGTTGGTATCTTCA+GGG | + | chr3_4:24479538-24479557 | Msa0495340:intron | 35.0% |
| GCCACACATATATCTAAAGA+GGG | + | chr3_4:24479689-24479708 | Msa0495340:CDS | 35.0% | |
| TCCCTCTTTAGATATATGTG+TGG | - | chr3_4:24479693-24479712 | None:intergenic | 35.0% | |
| ACACATATATCTAAAGAGGG+AGG | + | chr3_4:24479692-24479711 | Msa0495340:CDS | 35.0% | |
| ! | TTATATGGGTGCTCTAGATA+TGG | + | chr3_4:24479875-24479894 | Msa0495340:CDS | 35.0% |
| TGCAAAATGTGTCACCTTTA+TGG | - | chr3_4:24479999-24480018 | None:intergenic | 35.0% | |
| AGGATCAGTGATCAGTTAAT+TGG | - | chr3_4:24480097-24480116 | None:intergenic | 35.0% | |
| TTGAAATTGGAAATAGGCAC+GGG | + | chr3_4:24480179-24480198 | Msa0495340:intron | 35.0% | |
| TTCAAGTACACATCTAGCAT+TGG | - | chr3_4:24480236-24480255 | None:intergenic | 35.0% | |
| ATGTAGCTGAAATTGAACAG+TGG | + | chr3_4:24480322-24480341 | Msa0495340:intron | 35.0% | |
| TGTAGCTGAAATTGAACAGT+GGG | + | chr3_4:24480323-24480342 | Msa0495340:intron | 35.0% | |
| ! | GGAGACAACACATTACATTT+TGG | + | chr3_4:24480504-24480523 | Msa0495340:CDS | 35.0% |
| TCTCTTACCATCATAGGATA+TGG | - | chr3_4:24480550-24480569 | None:intergenic | 35.0% | |
| TGAAACTCTCTTACCATCAT+AGG | - | chr3_4:24480556-24480575 | None:intergenic | 35.0% | |
| AGAAACAAGAAAGCAAGCAT+TGG | + | chr3_4:24480591-24480610 | Msa0495340:CDS | 35.0% | |
| !! | GAAAGCAAGCATTGGAAAAA+TGG | + | chr3_4:24480599-24480618 | Msa0495340:CDS | 35.0% |
| !! | AAGCAAGCATTGGAAAAATG+GGG | + | chr3_4:24480601-24480620 | Msa0495340:CDS | 35.0% |
| ACACATGCTACTAGAATATC+TGG | - | chr3_4:24480634-24480653 | None:intergenic | 35.0% | |
| GATATTCTAGTAGCATGTGT+TGG | + | chr3_4:24480634-24480653 | Msa0495340:CDS | 35.0% | |
| !! | GACAATGATGTTAGGTTGAT+TGG | + | chr3_4:24480700-24480719 | Msa0495340:CDS | 35.0% |
| ! | TTCTCCTTTTGTTAACGTAG+CGG | - | chr3_4:24480767-24480786 | None:intergenic | 35.0% |
| ACGTTAACAAAAGGAGAAGT+CGG | + | chr3_4:24480769-24480788 | Msa0495340:CDS | 35.0% | |
| ! | TATCTTTTGCAGGATGATGA+TGG | + | chr3_4:24480814-24480833 | Msa0495340:CDS | 35.0% |
| ! | ATCTTTTGCAGGATGATGAT+GGG | + | chr3_4:24480815-24480834 | Msa0495340:CDS | 35.0% |
| ATAGTTTCTTGAGAGATGCA+GGG | + | chr3_4:24480989-24481008 | Msa0495340:CDS | 35.0% | |
| TGCTGAATACTACAGTGTTA+CGG | + | chr3_4:24481014-24481033 | Msa0495340:CDS | 35.0% | |
| ATTGTATCAAACCATGCAGT+GGG | - | chr3_4:24481207-24481226 | None:intergenic | 35.0% | |
| TATTGTATCAAACCATGCAG+TGG | - | chr3_4:24481208-24481227 | None:intergenic | 35.0% | |
| ! | GCTCTGAGTAGTTTATTTAG+TGG | - | chr3_4:24481428-24481447 | None:intergenic | 35.0% |
| ! | GCACATAAGTGATTTGAGTT+AGG | - | chr3_4:24481499-24481518 | None:intergenic | 35.0% |
| ATCCTCCATAAGATTAACAG+AGG | + | chr3_4:24481533-24481552 | Msa0495340:intron | 35.0% | |
| TCTAACATTGATACCTGATG+GGG | - | chr3_4:24481905-24481924 | None:intergenic | 35.0% | |
| CATCTAACATTGATACCTGA+TGG | - | chr3_4:24481907-24481926 | None:intergenic | 35.0% | |
| TGAATGGGAAAGAAAGAAAG+TGG | + | chr3_4:24481925-24481944 | Msa0495340:intron | 35.0% | |
| ATAACAAGTGATCACTTCCA+TGG | + | chr3_4:24481977-24481996 | Msa0495340:intron | 35.0% | |
| !!! | AATCCAGATTTTGACTACCA+TGG | - | chr3_4:24481997-24482016 | None:intergenic | 35.0% |
| ACATGATGCTTAATTGGAAG+TGG | - | chr3_4:24482059-24482078 | None:intergenic | 35.0% | |
| CTTCCAATTAAGCATCATGT+AGG | + | chr3_4:24482059-24482078 | Msa0495340:intron | 35.0% | |
| GCATATAAAATAGCACACAC+AGG | - | chr3_4:24482142-24482161 | None:intergenic | 35.0% | |
| TCTCAAACTGCATGTGTAAA+TGG | - | chr3_4:24482409-24482428 | None:intergenic | 35.0% | |
| GCACCTATCAAATTTGAATG+AGG | + | chr3_4:24482453-24482472 | Msa0495340:intron | 35.0% | |
| TAAGCCATAAAGTCGTTTCA+TGG | - | chr3_4:24482572-24482591 | None:intergenic | 35.0% | |
| TCAAATAAGTCAACTCGAAC+AGG | - | chr3_4:24482618-24482637 | None:intergenic | 35.0% | |
| AGACAGTTTGAGAGATTCTA+TGG | + | chr3_4:24482665-24482684 | Msa0495340:intron | 35.0% | |
| !! | CTTATTTTCATAAGCTCTCC+AGG | + | chr3_4:24482723-24482742 | Msa0495340:intron | 35.0% |
| !! | GCCGTTTTCATAAATTATCC+TGG | - | chr3_4:24482744-24482763 | None:intergenic | 35.0% |
| GGTTTCTTAACTGATTGTTC+AGG | + | chr3_4:24482993-24483012 | Msa0495340:intron | 35.0% | |
| GTATGTGATGATAAATGGCA+TGG | - | chr3_4:24483021-24483040 | None:intergenic | 35.0% | |
| !!! | TTTTAAGAGAGTATCCCAGT+TGG | + | chr3_4:24483128-24483147 | Msa0495340:CDS | 35.0% |
| AACCTTAGTTCCATTTGGAA+GGG | - | chr3_4:24483217-24483236 | None:intergenic | 35.0% | |
| CACTTGTGAAAGAATTCTTC+TGG | + | chr3_4:24483408-24483427 | Msa0495340:three_prime_UTR | 35.0% | |
| !!! | TCTGGGAAGAGTTTAGTTTT+TGG | + | chr3_4:24483426-24483445 | Msa0495340:three_prime_UTR | 35.0% |
| TTGGAAACCAATATATGCCT+AGG | + | chr3_4:24483445-24483464 | Msa0495340:three_prime_UTR | 35.0% | |
| GGAAAGGAGAAGAAGAAAAG+TGG | - | chr3_4:24477943-24477962 | None:intergenic | 40.0% | |
| TTATGGTTCTCCATTGGAAG+AGG | - | chr3_4:24477964-24477983 | None:intergenic | 40.0% | |
| AACCATAACAACAACGACAC+CGG | + | chr3_4:24477976-24477995 | Msa0495340:CDS | 40.0% | |
| !! | AAGTGGTTAGTGGGTTGTAA+TGG | + | chr3_4:24478240-24478259 | Msa0495340:intron | 40.0% |
| GAAAACAACTTGGGTGTGTT+TGG | + | chr3_4:24478381-24478400 | Msa0495340:intron | 40.0% | |
| GAGTGAGACAATGATCTGAT+TGG | - | chr3_4:24478716-24478735 | None:intergenic | 40.0% | |
| ! | TGTGAGCTTTTACTTCCGAT+AGG | + | chr3_4:24478753-24478772 | Msa0495340:intron | 40.0% |
| CGATGATTCATGGTACCTAT+CGG | - | chr3_4:24478771-24478790 | None:intergenic | 40.0% | |
| ! | CCATGAATCATCGTTGTTTC+GGG | + | chr3_4:24478778-24478797 | Msa0495340:intron | 40.0% |
| GAAAGTCACAAGTGACTAAC+TGG | + | chr3_4:24479180-24479199 | Msa0495340:intron | 40.0% | |
| ACTGACGAAGTAGAAACTCA+TGG | - | chr3_4:24479390-24479409 | None:intergenic | 40.0% | |
| ACATGTGATGTGGTCTACAA+AGG | - | chr3_4:24479449-24479468 | None:intergenic | 40.0% | |
| !! | GGTTGTTTCTACATGTGATG+TGG | - | chr3_4:24479459-24479478 | None:intergenic | 40.0% |
| TTGATTCTCGAAACCCATTG+GGG | + | chr3_4:24479494-24479513 | Msa0495340:intron | 40.0% | |
| CAAAAACTGAATCACCCCAA+TGG | - | chr3_4:24479511-24479530 | None:intergenic | 40.0% | |
| ! | TTTTTGCAGAAAGAGCTAGC+TGG | + | chr3_4:24479579-24479598 | Msa0495340:intron | 40.0% |
| ! | TTTTGCAGAAAGAGCTAGCT+GGG | + | chr3_4:24479580-24479599 | Msa0495340:intron | 40.0% |
| !! | TACAAGCATGGTAATGGTGA+AGG | + | chr3_4:24479666-24479685 | Msa0495340:CDS | 40.0% |
| !! | ACAAGCATGGTAATGGTGAA+GGG | + | chr3_4:24479667-24479686 | Msa0495340:CDS | 40.0% |
| GGCCACACATATATCTAAAG+AGG | + | chr3_4:24479688-24479707 | Msa0495340:CDS | 40.0% | |
| ! | TGCTCTAGATATGGAAAGAC+AGG | + | chr3_4:24479884-24479903 | Msa0495340:CDS | 40.0% |
| GCGCATTCTGAACACATTAA+GGG | - | chr3_4:24479910-24479929 | None:intergenic | 40.0% | |
| CAACAGCTAGTGTTCCATAA+AGG | + | chr3_4:24479982-24480001 | Msa0495340:intron | 40.0% | |
| ! | TGCCATCTGAGGTAAACATT+TGG | + | chr3_4:24480120-24480139 | Msa0495340:intron | 40.0% |
| TGCCAAATGTTTACCTCAGA+TGG | - | chr3_4:24480125-24480144 | None:intergenic | 40.0% | |
| CTGAAATTGAACAGTGGGAT+AGG | + | chr3_4:24480328-24480347 | Msa0495340:intron | 40.0% | |
| ATCGGAAGCTATAAGGGATT+GGG | + | chr3_4:24480471-24480490 | Msa0495340:CDS | 40.0% | |
| !!! | TACATTTTGGGTTCGGTTTG+TGG | + | chr3_4:24480517-24480536 | Msa0495340:CDS | 40.0% |
| !!! | ACATTTTGGGTTCGGTTTGT+GGG | + | chr3_4:24480518-24480537 | Msa0495340:CDS | 40.0% |
| ACCATCATAGGATATGGATG+TGG | - | chr3_4:24480544-24480563 | None:intergenic | 40.0% | |
| AGAGAGTTTCATGCAGTGAT+AGG | + | chr3_4:24480565-24480584 | Msa0495340:CDS | 40.0% | |
| GAGAGTTTCATGCAGTGATA+GGG | + | chr3_4:24480566-24480585 | Msa0495340:CDS | 40.0% | |
| !! | AAGCATTGGAAAAATGGGGA+GGG | + | chr3_4:24480605-24480624 | Msa0495340:CDS | 40.0% |
| ATTCTAGTAGCATGTGTTGG+CGG | + | chr3_4:24480637-24480656 | Msa0495340:CDS | 40.0% | |
| !! | TGATGTTAGGTTGATTGGAG+TGG | + | chr3_4:24480705-24480724 | Msa0495340:CDS | 40.0% |
| ! | AGCAATGAGCTATCTTTTGC+AGG | + | chr3_4:24480804-24480823 | Msa0495340:CDS | 40.0% |
| AACCTCATTCTATCAGTGCA+GGG | + | chr3_4:24480848-24480867 | Msa0495340:CDS | 40.0% | |
| ! | TTGTATAGGTTGGACTATCC+AGG | + | chr3_4:24480952-24480971 | Msa0495340:intron | 40.0% |
| ! | TGTATAGGTTGGACTATCCA+GGG | + | chr3_4:24480953-24480972 | Msa0495340:intron | 40.0% |
| TCTCTCAAGAAACTATGCTC+CGG | - | chr3_4:24480985-24481004 | None:intergenic | 40.0% | |
| CATAGTTTCTTGAGAGATGC+AGG | + | chr3_4:24480988-24481007 | Msa0495340:CDS | 40.0% | |
| ! | AGATTTTGCTTAAGATCGGG+AGG | + | chr3_4:24481240-24481259 | Msa0495340:intron | 40.0% |
| ! | GATTTTGCTTAAGATCGGGA+GGG | + | chr3_4:24481241-24481260 | Msa0495340:intron | 40.0% |
| ! | ATTTTGCTTAAGATCGGGAG+GGG | + | chr3_4:24481242-24481261 | Msa0495340:intron | 40.0% |
| TAATTACGTAGGATTGGGTG+TGG | + | chr3_4:24481308-24481327 | Msa0495340:intron | 40.0% | |
| TGGAGGATGATATGGTTGAT+TGG | - | chr3_4:24481521-24481540 | None:intergenic | 40.0% | |
| TGCCTCTGTTAATCTTATGG+AGG | - | chr3_4:24481538-24481557 | None:intergenic | 40.0% | |
| CTCTGCCTCTGTTAATCTTA+TGG | - | chr3_4:24481541-24481560 | None:intergenic | 40.0% | |
| AAGATTAACAGAGGCAGAGA+CGG | + | chr3_4:24481542-24481561 | Msa0495340:intron | 40.0% | |
| TTGATCTGCCTTTGCGTTTA+AGG | + | chr3_4:24481624-24481643 | Msa0495340:intron | 40.0% | |
| TTGTTCTCGATTCAAACTGC+AGG | + | chr3_4:24481788-24481807 | Msa0495340:intron | 40.0% | |
| TGTTCTCGATTCAAACTGCA+GGG | + | chr3_4:24481789-24481808 | Msa0495340:intron | 40.0% | |
| TGACATCATAATTCCCCATC+AGG | + | chr3_4:24481889-24481908 | Msa0495340:intron | 40.0% | |
| CTTCCATGGTAGTCAAAATC+TGG | + | chr3_4:24481991-24482010 | Msa0495340:intron | 40.0% | |
| GCACCTACATGATGCTTAAT+TGG | - | chr3_4:24482065-24482084 | None:intergenic | 40.0% | |
| AGGGTAGTCAAAATCCATGT+GGG | - | chr3_4:24482238-24482257 | None:intergenic | 40.0% | |
| ATACCTTGTAGAAGTGAGCA+GGG | - | chr3_4:24482257-24482276 | None:intergenic | 40.0% | |
| TATACCTTGTAGAAGTGAGC+AGG | - | chr3_4:24482258-24482277 | None:intergenic | 40.0% | |
| AGTCGTTTCATGGTGGTAAA+TGG | - | chr3_4:24482562-24482581 | None:intergenic | 40.0% | |
| ACCACCATGAAACGACTTTA+TGG | + | chr3_4:24482565-24482584 | Msa0495340:intron | 40.0% | |
| TATTTATCCAAACAGGGCCT+AGG | + | chr3_4:24482873-24482892 | Msa0495340:intron | 40.0% | |
| TGGAATTATGCCTTCCAACT+GGG | - | chr3_4:24483145-24483164 | None:intergenic | 40.0% | |
| TAGTTCCATTTGGAAGGGTA+GGG | - | chr3_4:24483212-24483231 | None:intergenic | 40.0% | |
| TTAGTTCCATTTGGAAGGGT+AGG | - | chr3_4:24483213-24483232 | None:intergenic | 40.0% | |
| TACCCTTCCAAATGGAACTA+AGG | + | chr3_4:24483212-24483231 | Msa0495340:CDS | 40.0% | |
| CAACCTTAGTTCCATTTGGA+AGG | - | chr3_4:24483218-24483237 | None:intergenic | 40.0% | |
| TCCAAATGGAACTAAGGTTG+TGG | + | chr3_4:24483218-24483237 | Msa0495340:CDS | 40.0% | |
| ACCACAACCTTAGTTCCATT+TGG | - | chr3_4:24483222-24483241 | None:intergenic | 40.0% | |
| TGTGAAGTTGACTGAGTTTG+AGG | + | chr3_4:24483380-24483399 | Msa0495340:three_prime_UTR | 40.0% | |
| CTTCTCCTTTCCTCTTCCAA+TGG | + | chr3_4:24477951-24477970 | Msa0495340:exon | 45.0% | |
| GTTCTCCATTGGAAGAGGAA+AGG | - | chr3_4:24477959-24477978 | None:intergenic | 45.0% | |
| !! | AACCGGTGTCGTTGTTGTTA+TGG | - | chr3_4:24477981-24478000 | None:intergenic | 45.0% |
| ! | TAACAACAACGACACCGGTT+CGG | + | chr3_4:24477981-24478000 | Msa0495340:CDS | 45.0% |
| GAGCATGGATGAGAGTTTCA+GGG | - | chr3_4:24478065-24478084 | None:intergenic | 45.0% | |
| AGAGCATGGATGAGAGTTTC+AGG | - | chr3_4:24478066-24478085 | None:intergenic | 45.0% | |
| ! | CTTGATCTGAAGCAAGGGAA+TGG | - | chr3_4:24478110-24478129 | None:intergenic | 45.0% |
| CCCGAAACAACGATGATTCA+TGG | - | chr3_4:24478781-24478800 | None:intergenic | 45.0% | |
| ! | CGTTGTTTCGGGTGATTCAT+TGG | + | chr3_4:24478789-24478808 | Msa0495340:intron | 45.0% |
| !! | CGGGTGATTCATTGGTCTTT+AGG | + | chr3_4:24478797-24478816 | Msa0495340:intron | 45.0% |
| ATGTCTTAGTCGCGATGACA+AGG | + | chr3_4:24479360-24479379 | Msa0495340:intron | 45.0% | |
| TTTGCAGAAAGAGCTAGCTG+GGG | + | chr3_4:24479581-24479600 | Msa0495340:intron | 45.0% | |
| ! | TTCTGAGGGACTATGTAGGT+AGG | + | chr3_4:24479604-24479623 | Msa0495340:CDS | 45.0% |
| TCTGAGGGACTATGTAGGTA+GGG | + | chr3_4:24479605-24479624 | Msa0495340:CDS | 45.0% | |
| GCCTCTCAGCAAAGTAAAGA+GGG | - | chr3_4:24479635-24479654 | None:intergenic | 45.0% | |
| AGCCTCTCAGCAAAGTAAAG+AGG | - | chr3_4:24479636-24479655 | None:intergenic | 45.0% | |
| GAGCACTACAAGCATGGTAA+TGG | + | chr3_4:24479660-24479679 | Msa0495340:CDS | 45.0% | |
| GCTTTGCTTGCCAAGAAGTT+GGG | + | chr3_4:24479762-24479781 | Msa0495340:CDS | 45.0% | |
| CTTTGCTTGCCAAGAAGTTG+GGG | + | chr3_4:24479763-24479782 | Msa0495340:CDS | 45.0% | |
| CAAGAAGTTGGGGAAGAAGA+GGG | + | chr3_4:24479773-24479792 | Msa0495340:CDS | 45.0% | |
| AAGAGGGTTATTGCTGAGAC+TGG | + | chr3_4:24479789-24479808 | Msa0495340:CDS | 45.0% | |
| GGCGCATTCTGAACACATTA+AGG | - | chr3_4:24479911-24479930 | None:intergenic | 45.0% | |
| !! | TGTTGATAGCCATCAGGTCA+AGG | - | chr3_4:24479967-24479986 | None:intergenic | 45.0% |
| !! | ACTAGCTGTTGATAGCCATC+AGG | - | chr3_4:24479973-24479992 | None:intergenic | 45.0% |
| GTTTACCTCAGATGGCAACT+AGG | - | chr3_4:24480117-24480136 | None:intergenic | 45.0% | |
| TTGGAAATAGGCACGGGAAA+AGG | + | chr3_4:24480185-24480204 | Msa0495340:intron | 45.0% | |
| TTGAACAGTGGGATAGGACT+TGG | + | chr3_4:24480334-24480353 | Msa0495340:intron | 45.0% | |
| TACGCTGAAAGACGCTACAT+CGG | + | chr3_4:24480453-24480472 | Msa0495340:CDS | 45.0% | |
| ACGCTACATCGGAAGCTATA+AGG | + | chr3_4:24480464-24480483 | Msa0495340:CDS | 45.0% | |
| CGCTACATCGGAAGCTATAA+GGG | + | chr3_4:24480465-24480484 | Msa0495340:CDS | 45.0% | |
| CATCGGAAGCTATAAGGGAT+TGG | + | chr3_4:24480470-24480489 | Msa0495340:CDS | 45.0% | |
| AAGGGATTGGGTGACTAATG+TGG | + | chr3_4:24480483-24480502 | Msa0495340:CDS | 45.0% | |
| GCCACATCCATATCCTATGA+TGG | + | chr3_4:24480540-24480559 | Msa0495340:CDS | 45.0% | |
| !! | CAAGCATTGGAAAAATGGGG+AGG | + | chr3_4:24480604-24480623 | Msa0495340:CDS | 45.0% |
| TTGATTGGAGTGGAAGCTTC+TGG | + | chr3_4:24480715-24480734 | Msa0495340:CDS | 45.0% | |
| CATGCCGCTACGTTAACAAA+AGG | + | chr3_4:24480760-24480779 | Msa0495340:CDS | 45.0% | |
| GAACCTCATTCTATCAGTGC+AGG | + | chr3_4:24480847-24480866 | Msa0495340:CDS | 45.0% | |
| ! | TACCCTGCACTGATAGAATG+AGG | - | chr3_4:24480853-24480872 | None:intergenic | 45.0% |
| ! | GTATAGGTTGGACTATCCAG+GGG | + | chr3_4:24480954-24480973 | Msa0495340:intron | 45.0% |
| TCAAACCATGCAGTGGGATA+TGG | - | chr3_4:24481201-24481220 | None:intergenic | 45.0% | |
| ! | TTTTGCTTAAGATCGGGAGG+GGG | + | chr3_4:24481243-24481262 | Msa0495340:intron | 45.0% |
| !! | AGACGGTTGATGATGATCTG+TGG | + | chr3_4:24481559-24481578 | Msa0495340:intron | 45.0% |
| !! | GACGGTTGATGATGATCTGT+GGG | + | chr3_4:24481560-24481579 | Msa0495340:intron | 45.0% |
| !! | GTTGATGATGATCTGTGGGA+GGG | + | chr3_4:24481564-24481583 | Msa0495340:intron | 45.0% |
| GATCAATCCTTTCCCTCTCT+TGG | - | chr3_4:24481610-24481629 | None:intergenic | 45.0% | |
| GGTAGTCAAAATCCATGTGG+GGG | - | chr3_4:24482236-24482255 | None:intergenic | 45.0% | |
| GGGTAGTCAAAATCCATGTG+GGG | - | chr3_4:24482237-24482256 | None:intergenic | 45.0% | |
| CAGGGTAGTCAAAATCCATG+TGG | - | chr3_4:24482239-24482258 | None:intergenic | 45.0% | |
| CGTTTCATGGTGGTAAATGG+TGG | - | chr3_4:24482559-24482578 | None:intergenic | 45.0% | |
| GCCATAAAGTCGTTTCATGG+TGG | - | chr3_4:24482569-24482588 | None:intergenic | 45.0% | |
| GCAACTTCAACTTCTGACCT+TGG | - | chr3_4:24483072-24483091 | None:intergenic | 45.0% | |
| !! | AAGAGAGTATCCCAGTTGGA+AGG | + | chr3_4:24483132-24483151 | Msa0495340:CDS | 45.0% |
| CTGGAATTATGCCTTCCAAC+TGG | - | chr3_4:24483146-24483165 | None:intergenic | 45.0% | |
| ! | GGAAGGCATAATTCCAGCTT+TGG | + | chr3_4:24483149-24483168 | Msa0495340:CDS | 45.0% |
| GCATGTGATGTTTCCAAAGC+TGG | - | chr3_4:24483165-24483184 | None:intergenic | 45.0% | |
| AAGGTTGTGGTTAACTGCAG+TGG | + | chr3_4:24483231-24483250 | Msa0495340:CDS | 45.0% | |
| TGGTTAACTGCAGTGGTAGA+GGG | + | chr3_4:24483238-24483257 | Msa0495340:CDS | 45.0% | |
| GAAGTTGACTGAGTTTGAGG+AGG | + | chr3_4:24483383-24483402 | Msa0495340:three_prime_UTR | 45.0% | |
| !!! | TATTTTATTTTTTTTGTTAA+AGG | - | chr3_4:24481152-24481171 | None:intergenic | 5.0% |
| TCGCTGAGATTGAACCGAAC+CGG | - | chr3_4:24477998-24478017 | None:intergenic | 50.0% | |
| TCTCAGCGACCCGATTCATT+TGG | + | chr3_4:24478009-24478028 | Msa0495340:CDS | 50.0% | |
| GGACATACTTGCCTCCAAAC+CGG | - | chr3_4:24478044-24478063 | None:intergenic | 50.0% | |
| !! | CTTCTAGCTCAGTGAGAGCA+TGG | - | chr3_4:24478080-24478099 | None:intergenic | 50.0% |
| GCCCTCTTTACTTTGCTGAG+AGG | + | chr3_4:24479631-24479650 | Msa0495340:CDS | 50.0% | |
| ! | CTGACAGAGCACTACAAGCA+TGG | + | chr3_4:24479654-24479673 | Msa0495340:CDS | 50.0% |
| GATCAATAACGCTGTCGCTC+AGG | + | chr3_4:24479740-24479759 | Msa0495340:CDS | 50.0% | |
| GGCTTTGCTTGCCAAGAAGT+TGG | + | chr3_4:24479761-24479780 | Msa0495340:CDS | 50.0% | |
| CCTCTTCTTCCCCAACTTCT+TGG | - | chr3_4:24479775-24479794 | None:intergenic | 50.0% | |
| CCAAGAAGTTGGGGAAGAAG+AGG | + | chr3_4:24479772-24479791 | Msa0495340:CDS | 50.0% | |
| GTTATTGCTGAGACTGGTGC+TGG | + | chr3_4:24479795-24479814 | Msa0495340:CDS | 50.0% | |
| !! | AGACTGGTGCTGGTCAACAT+GGG | + | chr3_4:24479805-24479824 | Msa0495340:CDS | 50.0% |
| GTGTTCAGAATGCGCCTTCT+TGG | + | chr3_4:24479915-24479934 | Msa0495340:CDS | 50.0% | |
| CACATACCTCAGCACCAAGA+AGG | - | chr3_4:24479932-24479951 | None:intergenic | 50.0% | |
| TTCTGAGTGCCTTGACCTGA+TGG | + | chr3_4:24479955-24479974 | Msa0495340:intron | 50.0% | |
| CTGATCCTAGTTGCCATCTG+AGG | + | chr3_4:24480109-24480128 | Msa0495340:intron | 50.0% | |
| TAGGTGAGAGCTGTACATGC+AGG | + | chr3_4:24480424-24480443 | Msa0495340:intron | 50.0% | |
| ! | TCTGGACTAGGCCTTGAAAG+TGG | + | chr3_4:24480733-24480752 | Msa0495340:CDS | 50.0% |
| !! | GGAGAAGTCGGTGTTTTGCA+TGG | + | chr3_4:24480781-24480800 | Msa0495340:CDS | 50.0% |
| !! | ACGAAGAAGCACTCGAAGGT+AGG | + | chr3_4:24481037-24481056 | Msa0495340:intron | 50.0% |
| CCATGCAGTGGGATATGGTT+TGG | - | chr3_4:24481196-24481215 | None:intergenic | 50.0% | |
| CCAAACCATATCCCACTGCA+TGG | + | chr3_4:24481193-24481212 | Msa0495340:intron | 50.0% | |
| TTTGCTTAAGATCGGGAGGG+GGG | + | chr3_4:24481244-24481263 | Msa0495340:intron | 50.0% | |
| GGGGTAGCAAGATCGTAACT+AGG | + | chr3_4:24481265-24481284 | Msa0495340:intron | 50.0% | |
| !! | GGTTGATGATGATCTGTGGG+AGG | + | chr3_4:24481563-24481582 | Msa0495340:intron | 50.0% |
| GGGAGAATGAGATGCAGAGA+AGG | + | chr3_4:24481584-24481603 | Msa0495340:intron | 50.0% | |
| ATGCAGAGAAGGCCAAGAGA+GGG | + | chr3_4:24481595-24481614 | Msa0495340:intron | 50.0% | |
| GGTCTAGGAAGCGAATTACG+CGG | + | chr3_4:24481735-24481754 | Msa0495340:intron | 50.0% | |
| TCAAAATCCATGTGGGGGTG+TGG | - | chr3_4:24482231-24482250 | None:intergenic | 50.0% | |
| CTACCCTGCTCACTTCTACA+AGG | + | chr3_4:24482251-24482270 | Msa0495340:intron | 50.0% | |
| GTGGTTAACTGCAGTGGTAG+AGG | + | chr3_4:24483237-24483256 | Msa0495340:CDS | 50.0% | |
| GGTTAACTGCAGTGGTAGAG+GGG | + | chr3_4:24483239-24483258 | Msa0495340:CDS | 50.0% | |
| GCTGAACTGTTCAACTACGC+TGG | - | chr3_4:24483324-24483343 | None:intergenic | 50.0% | |
| AGCGACCCGATTCATTTGGC+CGG | + | chr3_4:24478013-24478032 | Msa0495340:CDS | 55.0% | |
| CCGAACCGGCCAAATGAATC+GGG | - | chr3_4:24478021-24478040 | None:intergenic | 55.0% | |
| CCCGATTCATTTGGCCGGTT+CGG | + | chr3_4:24478018-24478037 | Msa0495340:CDS | 55.0% | |
| GCCGAACCGGCCAAATGAAT+CGG | - | chr3_4:24478022-24478041 | None:intergenic | 55.0% | |
| !! | ATTCATTTGGCCGGTTCGGC+CGG | + | chr3_4:24478022-24478041 | Msa0495340:CDS | 55.0% |
| AAGAGCTAGCTGGGGTTCTG+AGG | + | chr3_4:24479589-24479608 | Msa0495340:CDS | 55.0% | |
| ! | AGAGCTAGCTGGGGTTCTGA+GGG | + | chr3_4:24479590-24479609 | Msa0495340:CDS | 55.0% |
| !! | GGGGTTCTGAGGGACTATGT+AGG | + | chr3_4:24479600-24479619 | Msa0495340:CDS | 55.0% |
| AGGGAGGATCTCAACCACAC+TGG | + | chr3_4:24479708-24479727 | Msa0495340:CDS | 55.0% | |
| TGATCTTGTGAGCGCCAGTG+TGG | - | chr3_4:24479725-24479744 | None:intergenic | 55.0% | |
| !! | GAGACTGGTGCTGGTCAACA+TGG | + | chr3_4:24479804-24479823 | Msa0495340:CDS | 55.0% |
| !! | GACTGGTGCTGGTCAACATG+GGG | + | chr3_4:24479806-24479825 | Msa0495340:CDS | 55.0% |
| !! | AATGCGCCTTCTTGGTGCTG+AGG | + | chr3_4:24479923-24479942 | Msa0495340:CDS | 55.0% |
| ! | CTAGTAGCATGTGTTGGCGG+TGG | + | chr3_4:24480640-24480659 | Msa0495340:CDS | 55.0% |
| GGCGGTGGTTCAAATGCCAT+TGG | + | chr3_4:24480655-24480674 | Msa0495340:CDS | 55.0% | |
| GGAGTGGAAGCTTCTGGACT+AGG | + | chr3_4:24480721-24480740 | Msa0495340:CDS | 55.0% | |
| !! | CGGCATGCTTGCCACTTTCA+AGG | - | chr3_4:24480747-24480766 | None:intergenic | 55.0% |
| AGGTTGGACTATCCAGGGGT+TGG | + | chr3_4:24480958-24480977 | Msa0495340:intron | 55.0% | |
| !! | ACGGACGAAGAAGCACTCGA+AGG | + | chr3_4:24481033-24481052 | Msa0495340:CDS | 55.0% |
| TTGCTTAAGATCGGGAGGGG+GGG | + | chr3_4:24481245-24481264 | Msa0495340:intron | 55.0% | |
| GATGCAGAGAAGGCCAAGAG+AGG | + | chr3_4:24481594-24481613 | Msa0495340:intron | 55.0% | |
| GAGAAGGCCAAGAGAGGGAA+AGG | + | chr3_4:24481600-24481619 | Msa0495340:intron | 55.0% | |
| TCAGGTTTGCACGACCCAGT+TGG | - | chr3_4:24481666-24481685 | None:intergenic | 55.0% | |
| ! | AATCCATGTGGGGGTGTGGT+GGG | - | chr3_4:24482227-24482246 | None:intergenic | 55.0% |
| ! | AAATCCATGTGGGGGTGTGG+TGG | - | chr3_4:24482228-24482247 | None:intergenic | 55.0% |
| CTCTGCCCTACCCTTCCAAA+TGG | + | chr3_4:24483204-24483223 | Msa0495340:CDS | 55.0% | |
| CTGCAGTGGTAGAGGGGATA+AGG | + | chr3_4:24483245-24483264 | Msa0495340:CDS | 55.0% | |
| CAACCCAAACCGAGCGCACA+CGG | - | chr3_4:24479844-24479863 | None:intergenic | 60.0% | |
| GGACTATCCAGGGGTTGGAC+CGG | + | chr3_4:24480963-24480982 | Msa0495340:CDS | 60.0% | |
| TGCTTAAGATCGGGAGGGGG+GGG | + | chr3_4:24481246-24481265 | Msa0495340:intron | 60.0% | |
| ! | ATCCATGTGGGGGTGTGGTG+GGG | - | chr3_4:24482226-24482245 | None:intergenic | 60.0% |
| !! | TTTGGCCGGTTCGGCCGGTT+TGG | + | chr3_4:24478027-24478046 | Msa0495340:CDS | 65.0% |
| TGCCTCCAAACCGGCCGAAC+CGG | - | chr3_4:24478035-24478054 | None:intergenic | 65.0% | |
| CCACCGTGTGCGCTCGGTTT+GGG | + | chr3_4:24479838-24479857 | Msa0495340:CDS | 65.0% | |
| !! | CGTGTGCGCTCGGTTTGGGT+TGG | + | chr3_4:24479842-24479861 | Msa0495340:CDS | 65.0% |
| CTATGCTCCGGTCCAACCCC+TGG | - | chr3_4:24480973-24480992 | None:intergenic | 65.0% | |
| ! | TCCATGTGGGGGTGTGGTGG+GGG | - | chr3_4:24482225-24482244 | None:intergenic | 65.0% |
| CCACTGCCACCGTGTGCGCT+CGG | + | chr3_4:24479832-24479851 | Msa0495340:CDS | 70.0% | |
| GCCACCGTGTGCGCTCGGTT+TGG | + | chr3_4:24479837-24479856 | Msa0495340:CDS | 70.0% | |
| CCCAAACCGAGCGCACACGG+TGG | - | chr3_4:24479841-24479860 | None:intergenic | 70.0% | |
| ! | TGGGGGTGTGGTGGGGGGTT+GGG | - | chr3_4:24482219-24482238 | None:intergenic | 70.0% |
| ! | CCATGTGGGGGTGTGGTGGG+GGG | - | chr3_4:24482224-24482243 | None:intergenic | 70.0% |
| !! | GGCCGGTTCGGCCGGTTTGG+AGG | + | chr3_4:24478030-24478049 | Msa0495340:CDS | 75.0% |
| CCGAGCGCACACGGTGGCAG+TGG | - | chr3_4:24479835-24479854 | None:intergenic | 75.0% | |
| TGGTGGGGGGTTGGGGGGTC+GGG | - | chr3_4:24482211-24482230 | None:intergenic | 75.0% | |
| ! | GTGGTGGGGGGTTGGGGGGT+CGG | - | chr3_4:24482212-24482231 | None:intergenic | 75.0% |
| ! | GGGTGTGGTGGGGGGTTGGG+GGG | - | chr3_4:24482216-24482235 | None:intergenic | 75.0% |
| ! | GGGGTGTGGTGGGGGGTTGG+GGG | - | chr3_4:24482217-24482236 | None:intergenic | 75.0% |
| ! | GGGGGTGTGGTGGGGGGTTG+GGG | - | chr3_4:24482218-24482237 | None:intergenic | 75.0% |
| ! | GTGGGGGTGTGGTGGGGGGT+TGG | - | chr3_4:24482220-24482239 | None:intergenic | 75.0% |
| CCCCCCACCACACCCCCACA+TGG | + | chr3_4:24482221-24482240 | Msa0495340:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 24477899 | 24483656 | 24477899 | ID=Msa0495340;Name=Msa0495340 |
| chr3_4 | mRNA | 24477899 | 24483656 | 24477899 | ID=Msa0495340-mRNA-1;Parent=Msa0495340;Name=Msa0495340-mRNA-1;_AED=0.04;_eAED=0.04;_QI=71|1|1|1|1|1|5|354|412 |
| chr3_4 | exon | 24477899 | 24478137 | 24477899 | ID=Msa0495340-mRNA-1:exon:5921;Parent=Msa0495340-mRNA-1 |
| chr3_4 | exon | 24479588 | 24479944 | 24479588 | ID=Msa0495340-mRNA-1:exon:5922;Parent=Msa0495340-mRNA-1 |
| chr3_4 | exon | 24480427 | 24480869 | 24480427 | ID=Msa0495340-mRNA-1:exon:5923;Parent=Msa0495340-mRNA-1 |
| chr3_4 | exon | 24480960 | 24481054 | 24480960 | ID=Msa0495340-mRNA-1:exon:5924;Parent=Msa0495340-mRNA-1 |
| chr3_4 | exon | 24483127 | 24483656 | 24483127 | ID=Msa0495340-mRNA-1:exon:5925;Parent=Msa0495340-mRNA-1 |
| chr3_4 | five_prime_UTR | 24477899 | 24477969 | 24477899 | ID=Msa0495340-mRNA-1:five_prime_utr;Parent=Msa0495340-mRNA-1 |
| chr3_4 | CDS | 24477970 | 24478137 | 24477970 | ID=Msa0495340-mRNA-1:cds;Parent=Msa0495340-mRNA-1 |
| chr3_4 | CDS | 24479588 | 24479944 | 24479588 | ID=Msa0495340-mRNA-1:cds;Parent=Msa0495340-mRNA-1 |
| chr3_4 | CDS | 24480427 | 24480869 | 24480427 | ID=Msa0495340-mRNA-1:cds;Parent=Msa0495340-mRNA-1 |
| chr3_4 | CDS | 24480960 | 24481054 | 24480960 | ID=Msa0495340-mRNA-1:cds;Parent=Msa0495340-mRNA-1 |
| chr3_4 | CDS | 24483127 | 24483302 | 24483127 | ID=Msa0495340-mRNA-1:cds;Parent=Msa0495340-mRNA-1 |
| chr3_4 | three_prime_UTR | 24483303 | 24483656 | 24483303 | ID=Msa0495340-mRNA-1:three_prime_utr;Parent=Msa0495340-mRNA-1 |
| Gene Sequence |
| Protein sequence |
