Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0498480 | KEH33559.1 | 84.167 | 120 | 18 | 1 | 1 | 119 | 5 | 124 | 3.30e-64 | 205 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0498480 | A0A072UUP8 | 84.167 | 120 | 18 | 1 | 1 | 119 | 5 | 124 | 1.58e-64 | 205 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0498480 | Msa0502730 | 0.835986 | 1.218825e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0498480 | MtrunA17_Chr3g0095941 | 84.167 | 120 | 18 | 1 | 1 | 119 | 5 | 124 | 4.70e-68 | 204 |
| Msa0498480 | MtrunA17_Chr3g0095931 | 67.568 | 111 | 30 | 3 | 5 | 115 | 9 | 113 | 1.63e-42 | 139 |
| Msa0498480 | MtrunA17_Chr3g0094521 | 60.345 | 116 | 39 | 4 | 5 | 119 | 9 | 118 | 1.24e-40 | 135 |
| Msa0498480 | MtrunA17_Chr3g0105041 | 52.632 | 114 | 48 | 2 | 9 | 122 | 13 | 120 | 6.13e-32 | 112 |
| Msa0498480 | MtrunA17_Chr3g0105001 | 53.043 | 115 | 48 | 2 | 5 | 119 | 9 | 117 | 6.95e-32 | 112 |
| Msa0498480 | MtrunA17_Chr3g0104901 | 54.054 | 111 | 45 | 2 | 9 | 119 | 13 | 117 | 1.29e-31 | 112 |
| Msa0498480 | MtrunA17_Chr3g0104981 | 53.153 | 111 | 46 | 2 | 9 | 119 | 13 | 117 | 1.48e-31 | 111 |
| Msa0498480 | MtrunA17_Chr3g0105021 | 53.153 | 111 | 46 | 2 | 9 | 119 | 13 | 117 | 1.55e-31 | 111 |
| Msa0498480 | MtrunA17_Chr3g0105011 | 53.153 | 111 | 46 | 2 | 9 | 119 | 13 | 117 | 1.55e-31 | 111 |
| Msa0498480 | MtrunA17_Chr3g0104951 | 53.153 | 111 | 46 | 2 | 9 | 119 | 13 | 117 | 1.59e-31 | 111 |
| Msa0498480 | MtrunA17_Chr3g0104931 | 53.153 | 111 | 46 | 2 | 9 | 119 | 13 | 117 | 1.59e-31 | 111 |
| Msa0498480 | MtrunA17_Chr3g0104971 | 53.153 | 111 | 46 | 2 | 9 | 119 | 13 | 117 | 1.59e-31 | 111 |
| Msa0498480 | MtrunA17_Chr3g0104941 | 53.153 | 111 | 46 | 2 | 9 | 119 | 13 | 117 | 1.59e-31 | 111 |
| Msa0498480 | MtrunA17_Chr3g0104921 | 53.153 | 111 | 46 | 2 | 9 | 119 | 3 | 107 | 1.68e-31 | 111 |
| Msa0498480 | MtrunA17_Chr3g0104911 | 53.153 | 111 | 46 | 2 | 9 | 119 | 3 | 107 | 1.68e-31 | 111 |
| Msa0498480 | MtrunA17_Chr3g0104991 | 53.153 | 111 | 46 | 2 | 9 | 119 | 13 | 117 | 3.56e-31 | 110 |
| Msa0498480 | MtrunA17_Chr3g0105031 | 52.252 | 111 | 47 | 2 | 9 | 119 | 3 | 107 | 6.44e-31 | 109 |
| Msa0498480 | MtrunA17_Chr3g0101431 | 52.252 | 111 | 47 | 2 | 9 | 119 | 12 | 116 | 7.37e-31 | 110 |
| Msa0498480 | MtrunA17_Chr3g0104961 | 52.252 | 111 | 47 | 2 | 9 | 119 | 13 | 117 | 2.89e-30 | 108 |
| Msa0498480 | MtrunA17_Chr3g0095991 | 47.748 | 111 | 52 | 2 | 9 | 119 | 13 | 117 | 2.83e-28 | 103 |
| Msa0498480 | MtrunA17_Chr3g0096021 | 47.748 | 111 | 52 | 2 | 9 | 119 | 13 | 117 | 3.05e-28 | 103 |
| Msa0498480 | MtrunA17_Chr3g0095951 | 47.748 | 111 | 52 | 2 | 9 | 119 | 13 | 117 | 3.67e-28 | 102 |
| Msa0498480 | MtrunA17_Chr3g0096031 | 46.847 | 111 | 53 | 2 | 9 | 119 | 13 | 117 | 5.51e-27 | 100 |
| Msa0498480 | MtrunA17_Chr3g0096051 | 43.478 | 115 | 59 | 2 | 5 | 119 | 9 | 117 | 1.02e-21 | 86.3 |
| Msa0498480 | MtrunA17_Chr3g0096041 | 42.342 | 111 | 58 | 2 | 9 | 119 | 13 | 117 | 1.42e-19 | 80.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 64 sgRNAs with CRISPR-Local
Find 318 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTATTCCAGGAGTGTTTA+TGG | 0.176030 | 3_4:+34914029 | Msa0498480:CDS |
| CGCGACGGCGGCGGGTTTGA+TGG | 0.254904 | 3_4:-34915862 | None:intergenic |
| TGAGGGAAGGGTGAGAAATT+AGG | 0.259401 | 3_4:-34915779 | None:intergenic |
| GATAGGTGGTGTTGGCCTTT+TGG | 0.290143 | 3_4:-34914137 | None:intergenic |
| TTCAGTGAGGGTGAGGGCTT+TGG | 0.315107 | 3_4:-34915953 | None:intergenic |
| TGCTCTTCTGAATCTATTCC+AGG | 0.337734 | 3_4:+34914018 | Msa0498480:CDS |
| CAATCACTAGATGGTGTTGC+TGG | 0.367615 | 3_4:-34914090 | None:intergenic |
| GATGAGAGTTGGCTGAGATT+TGG | 0.370271 | 3_4:-34915821 | None:intergenic |
| AGCATGCATAAAACCATTAC+AGG | 0.388129 | 3_4:-34913955 | None:intergenic |
| TGCGGGTTTCGCGACGGCGG+CGG | 0.393428 | 3_4:-34915871 | None:intergenic |
| TTTGGATCTCGCACAGGAAT+GGG | 0.396091 | 3_4:-34915803 | None:intergenic |
| AGCATGAGATATCATCGATT+TGG | 0.397296 | 3_4:-34913999 | None:intergenic |
| AAGTGATTCGACAGTTGGTT+TGG | 0.399948 | 3_4:-34916009 | None:intergenic |
| GCGGGTTTCGCGACGGCGGC+GGG | 0.410340 | 3_4:-34915870 | None:intergenic |
| GAAGGGTGAGAAATTAGGTT+TGG | 0.415266 | 3_4:-34915774 | None:intergenic |
| AGTGATTCGACAGTTGGTTT+GGG | 0.420631 | 3_4:-34916008 | None:intergenic |
| AGTGGGTTTCGCGACGGAGG+TGG | 0.425903 | 3_4:-34915901 | None:intergenic |
| AGCAACTAATTTGTTCCAAA+AGG | 0.441819 | 3_4:+34914122 | Msa0498480:CDS |
| ACGGAGGTGGGTGGATGTGC+GGG | 0.442949 | 3_4:-34915888 | None:intergenic |
| ACCAACTGTCGAATCACTTT+CGG | 0.445226 | 3_4:+34916013 | Msa0498480:CDS |
| GAGGGATTTGCAGAGAATAG+AGG | 0.460199 | 3_4:-34915978 | None:intergenic |
| CCGACACAACAATCACTAGA+TGG | 0.461966 | 3_4:-34914099 | None:intergenic |
| AAGGGTGAGAAATTAGGTTT+GGG | 0.462215 | 3_4:-34915773 | None:intergenic |
| CGGGTTTGATGGTTAATAAG+AGG | 0.474336 | 3_4:-34915851 | None:intergenic |
| ACCGAAAGTGATTCGACAGT+TGG | 0.478210 | 3_4:-34916014 | None:intergenic |
| ACAGGAATGGGGTGAGGGAA+GGG | 0.479657 | 3_4:-34915791 | None:intergenic |
| TCGACAGTTGGTTTGGGTAA+CGG | 0.481586 | 3_4:-34916002 | None:intergenic |
| AACAATGCCATAAACACTCC+TGG | 0.485785 | 3_4:-34914036 | None:intergenic |
| AGGGATTTGCAGAGAATAGA+GGG | 0.487362 | 3_4:-34915977 | None:intergenic |
| ATTTGGATCTCGCACAGGAA+TGG | 0.490897 | 3_4:-34915804 | None:intergenic |
| ACAGAGATATCTCCGAAGAT+AGG | 0.495289 | 3_4:-34914154 | None:intergenic |
| CACAGGAATGGGGTGAGGGA+AGG | 0.499993 | 3_4:-34915792 | None:intergenic |
| TCTCGCACAGGAATGGGGTG+AGG | 0.506915 | 3_4:-34915797 | None:intergenic |
| ACAAACCTTGAGGTGATGAG+TGG | 0.515801 | 3_4:-34915919 | None:intergenic |
| GACGGAGGTGGGTGGATGTG+CGG | 0.516023 | 3_4:-34915889 | None:intergenic |
| GTGGGTTTCGCGACGGAGGT+GGG | 0.517588 | 3_4:-34915900 | None:intergenic |
| AGAGGGTTTCAGTGAGGGTG+AGG | 0.518579 | 3_4:-34915960 | None:intergenic |
| AGGCCAACACCACCTATCTT+CGG | 0.526531 | 3_4:+34914142 | Msa0498480:CDS |
| TGAGGGTGAGGGCTTTGGTG+AGG | 0.543216 | 3_4:-34915948 | None:intergenic |
| GAGGGTCGATTGATGAGAGT+TGG | 0.548870 | 3_4:-34915832 | None:intergenic |
| AGAATAGAGGGTTTCAGTGA+GGG | 0.549692 | 3_4:-34915965 | None:intergenic |
| CTGAGATTTGGATCTCGCAC+AGG | 0.551453 | 3_4:-34915809 | None:intergenic |
| AATCACTAGATGGTGTTGCT+GGG | 0.551706 | 3_4:-34914089 | None:intergenic |
| GGTTTCGCGACGGAGGTGGG+TGG | 0.552072 | 3_4:-34915897 | None:intergenic |
| TTAGCTCTCTCTGAAACCAA+TGG | 0.553037 | 3_4:-34914210 | None:intergenic |
| CTCGCACAGGAATGGGGTGA+GGG | 0.559095 | 3_4:-34915796 | None:intergenic |
| CCATCTAGTGATTGTTGTGT+CGG | 0.560637 | 3_4:+34914099 | Msa0498480:CDS |
| GTTGGTTTGGGTAACGGTGA+GGG | 0.562097 | 3_4:-34915996 | None:intergenic |
| GGGTTTGATGGTTAATAAGA+GGG | 0.574360 | 3_4:-34915850 | None:intergenic |
| TGGATGTGCGGGTTTCGCGA+CGG | 0.579738 | 3_4:-34915877 | None:intergenic |
| GAGGGTTTCAGTGAGGGTGA+GGG | 0.599666 | 3_4:-34915959 | None:intergenic |
| TCTCCGAAGATAGGTGGTGT+TGG | 0.611842 | 3_4:-34914145 | None:intergenic |
| ATGAGTGGGTTTCGCGACGG+AGG | 0.613840 | 3_4:-34915904 | None:intergenic |
| TTGGATCTCGCACAGGAATG+GGG | 0.626363 | 3_4:-34915802 | None:intergenic |
| AGTTGGTTTGGGTAACGGTG+AGG | 0.630852 | 3_4:-34915997 | None:intergenic |
| GAGATATCTCCGAAGATAGG+TGG | 0.640801 | 3_4:-34914151 | None:intergenic |
| CAAACCTTGAGGTGATGAGT+GGG | 0.641737 | 3_4:-34915918 | None:intergenic |
| ACACTAATGTGACAAAGTTG+AGG | 0.643864 | 3_4:-34914240 | None:intergenic |
| GAGAATAGAGGGTTTCAGTG+AGG | 0.643929 | 3_4:-34915966 | None:intergenic |
| TGAGTCATTCAATCGTAATG+TGG | 0.657113 | 3_4:-34916045 | None:intergenic |
| ATGTGCGGGTTTCGCGACGG+CGG | 0.668686 | 3_4:-34915874 | None:intergenic |
| GAAACCCACTCATCACCTCA+AGG | 0.669056 | 3_4:+34915914 | Msa0498480:CDS |
| GTGATGAGTGGGTTTCGCGA+CGG | 0.669184 | 3_4:-34915907 | None:intergenic |
| GAGGTTTCGCACAAACCTTG+AGG | 0.674465 | 3_4:-34915929 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGTTTTATTATGTATATAT+AGG | + | chr3_4:34914367-34914386 | Msa0498480:intron | 10.0% |
| !! | TAATATTTATTATCAACTTT+AGG | + | chr3_4:34914604-34914623 | Msa0498480:intron | 10.0% |
| !!! | TTTTTTGTATAATTTGTTTA+TGG | - | chr3_4:34914685-34914704 | None:intergenic | 10.0% |
| !!! | TTTTATTTTATTTGAATTGA+AGG | + | chr3_4:34915191-34915210 | Msa0498480:intron | 10.0% |
| !!! | TATAAAATTGTTTTTAAATC+GGG | - | chr3_4:34915696-34915715 | None:intergenic | 10.0% |
| !!! | TTGTTTTATTATGTATATAT+AGG | + | chr3_4:34914367-34914386 | Msa0498480:intron | 10.0% |
| !! | TAATATTTATTATCAACTTT+AGG | + | chr3_4:34914604-34914623 | Msa0498480:intron | 10.0% |
| !!! | TTTTTTGTATAATTTGTTTA+TGG | - | chr3_4:34914685-34914704 | None:intergenic | 10.0% |
| !!! | TTTTATTTTATTTGAATTGA+AGG | + | chr3_4:34915191-34915210 | Msa0498480:intron | 10.0% |
| !!! | TATAAAATTGTTTTTAAATC+GGG | - | chr3_4:34915696-34915715 | None:intergenic | 10.0% |
| !!! | AACAAAAACAAAAACATTTT+TGG | - | chr3_4:34915275-34915294 | None:intergenic | 15.0% |
| !!! | AAAAATGTTTTTGTTTTTGT+TGG | + | chr3_4:34915274-34915293 | Msa0498480:intron | 15.0% |
| !!! | TTGATTTTAAGTTTGAAAAT+TGG | + | chr3_4:34915297-34915316 | Msa0498480:intron | 15.0% |
| !! | AATTTGATTAAGAAAATGAA+AGG | + | chr3_4:34915430-34915449 | Msa0498480:intron | 15.0% |
| !! | ATTTGATTAAGAAAATGAAA+GGG | + | chr3_4:34915431-34915450 | Msa0498480:intron | 15.0% |
| !!! | TGATATTGTTCATATTTTTT+TGG | + | chr3_4:34915505-34915524 | Msa0498480:intron | 15.0% |
| !!! | AACAAAAACAAAAACATTTT+TGG | - | chr3_4:34915275-34915294 | None:intergenic | 15.0% |
| !!! | AAAAATGTTTTTGTTTTTGT+TGG | + | chr3_4:34915274-34915293 | Msa0498480:intron | 15.0% |
| !!! | TTGATTTTAAGTTTGAAAAT+TGG | + | chr3_4:34915297-34915316 | Msa0498480:intron | 15.0% |
| !! | AATTTGATTAAGAAAATGAA+AGG | + | chr3_4:34915430-34915449 | Msa0498480:intron | 15.0% |
| !! | ATTTGATTAAGAAAATGAAA+GGG | + | chr3_4:34915431-34915450 | Msa0498480:intron | 15.0% |
| !!! | TGATATTGTTCATATTTTTT+TGG | + | chr3_4:34915505-34915524 | Msa0498480:intron | 15.0% |
| !!! | ATCAAAAATATTTTTTCGAC+AGG | + | chr3_4:34914183-34914202 | Msa0498480:CDS | 20.0% |
| !!! | GTAAATCAACTTTAAAAGTT+GGG | - | chr3_4:34914519-34914538 | None:intergenic | 20.0% |
| !!! | CGTTTTATGATATTCATTAA+TGG | + | chr3_4:34914538-34914557 | Msa0498480:intron | 20.0% |
| !! | ATACATTAAACACTAGAAAT+TGG | - | chr3_4:34914635-34914654 | None:intergenic | 20.0% |
| !!! | TTCTAGTGTTTAATGTATTT+TGG | + | chr3_4:34914637-34914656 | Msa0498480:intron | 20.0% |
| !!! | TTTTTTTTCCGAATTAACAA+AGG | - | chr3_4:34914731-34914750 | None:intergenic | 20.0% |
| !! | ATTTAATTGTTAGTGAAAAG+AGG | + | chr3_4:34914753-34914772 | Msa0498480:intron | 20.0% |
| !! | AAGAAAAAATAAGATATCAC+CGG | - | chr3_4:34914954-34914973 | None:intergenic | 20.0% |
| !!! | GTGATATCTTATTTTTTCTT+GGG | + | chr3_4:34914954-34914973 | Msa0498480:intron | 20.0% |
| !!! | ATTAACTCAGAGATTTTAAA+TGG | + | chr3_4:34915598-34915617 | Msa0498480:intron | 20.0% |
| !!! | TTAACTCAGAGATTTTAAAT+GGG | + | chr3_4:34915599-34915618 | Msa0498480:intron | 20.0% |
| !!! | ATCAAAAATATTTTTTCGAC+AGG | + | chr3_4:34914183-34914202 | Msa0498480:CDS | 20.0% |
| !!! | GTAAATCAACTTTAAAAGTT+GGG | - | chr3_4:34914519-34914538 | None:intergenic | 20.0% |
| !!! | CGTTTTATGATATTCATTAA+TGG | + | chr3_4:34914538-34914557 | Msa0498480:intron | 20.0% |
| !! | ATACATTAAACACTAGAAAT+TGG | - | chr3_4:34914635-34914654 | None:intergenic | 20.0% |
| !!! | TTCTAGTGTTTAATGTATTT+TGG | + | chr3_4:34914637-34914656 | Msa0498480:intron | 20.0% |
| !!! | TTTTTTTTCCGAATTAACAA+AGG | - | chr3_4:34914731-34914750 | None:intergenic | 20.0% |
| !! | ATTTAATTGTTAGTGAAAAG+AGG | + | chr3_4:34914753-34914772 | Msa0498480:intron | 20.0% |
| !! | AAGAAAAAATAAGATATCAC+CGG | - | chr3_4:34914954-34914973 | None:intergenic | 20.0% |
| !!! | GTGATATCTTATTTTTTCTT+GGG | + | chr3_4:34914954-34914973 | Msa0498480:intron | 20.0% |
| !!! | ATTAACTCAGAGATTTTAAA+TGG | + | chr3_4:34915598-34915617 | Msa0498480:intron | 20.0% |
| !!! | TTAACTCAGAGATTTTAAAT+GGG | + | chr3_4:34915599-34915618 | Msa0498480:intron | 20.0% |
| !!! | CAATCAATTTTAGGATCAAT+TGG | - | chr3_4:34914273-34914292 | None:intergenic | 25.0% |
| !! | TACGAGTTACAATCAATTTT+AGG | - | chr3_4:34914282-34914301 | None:intergenic | 25.0% |
| !! | CGTAAATCAACTTTAAAAGT+TGG | - | chr3_4:34914520-34914539 | None:intergenic | 25.0% |
| !!! | TTTAATGTATTTTGGTGAGT+AGG | + | chr3_4:34914645-34914664 | Msa0498480:intron | 25.0% |
| ! | TGAGATATTTCAATGTGATT+TGG | + | chr3_4:34914826-34914845 | Msa0498480:intron | 25.0% |
| !!! | GGTGATATCTTATTTTTTCT+TGG | + | chr3_4:34914953-34914972 | Msa0498480:intron | 25.0% |
| !!! | TATCTTATTTTTTCTTGGGA+AGG | + | chr3_4:34914958-34914977 | Msa0498480:intron | 25.0% |
| !!! | ATCTTATTTTTTCTTGGGAA+GGG | + | chr3_4:34914959-34914978 | Msa0498480:intron | 25.0% |
| !!! | AAAATTGGAGTTTTGAAGAA+TGG | + | chr3_4:34915312-34915331 | Msa0498480:intron | 25.0% |
| ! | ATGAGATTTGAAAAAAAGTG+AGG | + | chr3_4:34915356-34915375 | Msa0498480:intron | 25.0% |
| ! | AATGAAAGGGAAAATTACAA+TGG | + | chr3_4:34915444-34915463 | Msa0498480:intron | 25.0% |
| ! | ATGAAAGGGAAAATTACAAT+GGG | + | chr3_4:34915445-34915464 | Msa0498480:intron | 25.0% |
| !! | TCCTTTTCATAATAAACCTT+GGG | - | chr3_4:34915479-34915498 | None:intergenic | 25.0% |
| !! | ATCCTTTTCATAATAAACCT+TGG | - | chr3_4:34915480-34915499 | None:intergenic | 25.0% |
| !! | TCAAAATCTTTTCTTGTCAT+GGG | - | chr3_4:34915648-34915667 | None:intergenic | 25.0% |
| !!! | CAATCAATTTTAGGATCAAT+TGG | - | chr3_4:34914273-34914292 | None:intergenic | 25.0% |
| !! | TACGAGTTACAATCAATTTT+AGG | - | chr3_4:34914282-34914301 | None:intergenic | 25.0% |
| !! | CGTAAATCAACTTTAAAAGT+TGG | - | chr3_4:34914520-34914539 | None:intergenic | 25.0% |
| !!! | TTTAATGTATTTTGGTGAGT+AGG | + | chr3_4:34914645-34914664 | Msa0498480:intron | 25.0% |
| ! | TGAGATATTTCAATGTGATT+TGG | + | chr3_4:34914826-34914845 | Msa0498480:intron | 25.0% |
| !!! | GGTGATATCTTATTTTTTCT+TGG | + | chr3_4:34914953-34914972 | Msa0498480:intron | 25.0% |
| !!! | TATCTTATTTTTTCTTGGGA+AGG | + | chr3_4:34914958-34914977 | Msa0498480:intron | 25.0% |
| !!! | ATCTTATTTTTTCTTGGGAA+GGG | + | chr3_4:34914959-34914978 | Msa0498480:intron | 25.0% |
| !!! | AAAATTGGAGTTTTGAAGAA+TGG | + | chr3_4:34915312-34915331 | Msa0498480:intron | 25.0% |
| ! | ATGAGATTTGAAAAAAAGTG+AGG | + | chr3_4:34915356-34915375 | Msa0498480:intron | 25.0% |
| ! | AATGAAAGGGAAAATTACAA+TGG | + | chr3_4:34915444-34915463 | Msa0498480:intron | 25.0% |
| ! | ATGAAAGGGAAAATTACAAT+GGG | + | chr3_4:34915445-34915464 | Msa0498480:intron | 25.0% |
| !! | TCCTTTTCATAATAAACCTT+GGG | - | chr3_4:34915479-34915498 | None:intergenic | 25.0% |
| !! | ATCCTTTTCATAATAAACCT+TGG | - | chr3_4:34915480-34915499 | None:intergenic | 25.0% |
| !! | TCAAAATCTTTTCTTGTCAT+GGG | - | chr3_4:34915648-34915667 | None:intergenic | 25.0% |
| ! | ATATCTTTTTGTGCCTGTAA+TGG | + | chr3_4:34913942-34913961 | Msa0498480:CDS | 30.0% |
| !!! | AATGGTTTTATGCATGCTAA+TGG | + | chr3_4:34913960-34913979 | Msa0498480:CDS | 30.0% |
| !! | AGCAACTAATTTGTTCCAAA+AGG | + | chr3_4:34914122-34914141 | Msa0498480:CDS | 30.0% |
| ATCCCATGATTTATGCAATA+GGG | + | chr3_4:34914390-34914409 | Msa0498480:intron | 30.0% | |
| ! | AGGTTGCAATCATTTTATTG+AGG | - | chr3_4:34914711-34914730 | None:intergenic | 30.0% |
| GATTGCAACCTTTGTTAATT+CGG | + | chr3_4:34914720-34914739 | Msa0498480:intron | 30.0% | |
| !!! | TGAAAAGTGTTGTTTTATCC+TGG | + | chr3_4:34914887-34914906 | Msa0498480:intron | 30.0% |
| !!! | TGTTGTTTTATCCTGGTTTT+CGG | + | chr3_4:34914894-34914913 | Msa0498480:intron | 30.0% |
| ! | TACGTTTGAACCTTTTTAAC+CGG | + | chr3_4:34914932-34914951 | Msa0498480:intron | 30.0% |
| ! | TAAGATATCACCGGTTAAAA+AGG | - | chr3_4:34914945-34914964 | None:intergenic | 30.0% |
| TAGGATACTATAGTCGTTAT+GGG | - | chr3_4:34915053-34915072 | None:intergenic | 30.0% | |
| ATAGGATACTATAGTCGTTA+TGG | - | chr3_4:34915054-34915073 | None:intergenic | 30.0% | |
| TAACGACTATAGTATCCTAT+AGG | + | chr3_4:34915054-34915073 | Msa0498480:intron | 30.0% | |
| TTACTAAGTCAAGAATTGGA+GGG | + | chr3_4:34915150-34915169 | Msa0498480:intron | 30.0% | |
| !! | ACATTTTTGGAAGAGAACTA+CGG | - | chr3_4:34915262-34915281 | None:intergenic | 30.0% |
| TTTCAAATCTCATGCCTATA+AGG | - | chr3_4:34915349-34915368 | None:intergenic | 30.0% | |
| AGATTTGAAAAAAAGTGAGG+TGG | + | chr3_4:34915359-34915378 | Msa0498480:intron | 30.0% | |
| TCCCAAGGTTTATTATGAAA+AGG | + | chr3_4:34915475-34915494 | Msa0498480:intron | 30.0% | |
| CTAGTGATTGTATGTTTAGA+TGG | - | chr3_4:34915564-34915583 | None:intergenic | 30.0% | |
| ! | GTCAAAATCTTTTCTTGTCA+TGG | - | chr3_4:34915649-34915668 | None:intergenic | 30.0% |
| ! | ATATCTTTTTGTGCCTGTAA+TGG | + | chr3_4:34913942-34913961 | Msa0498480:CDS | 30.0% |
| !!! | AATGGTTTTATGCATGCTAA+TGG | + | chr3_4:34913960-34913979 | Msa0498480:CDS | 30.0% |
| !! | AGCAACTAATTTGTTCCAAA+AGG | + | chr3_4:34914122-34914141 | Msa0498480:CDS | 30.0% |
| ATCCCATGATTTATGCAATA+GGG | + | chr3_4:34914390-34914409 | Msa0498480:intron | 30.0% | |
| ! | AGGTTGCAATCATTTTATTG+AGG | - | chr3_4:34914711-34914730 | None:intergenic | 30.0% |
| GATTGCAACCTTTGTTAATT+CGG | + | chr3_4:34914720-34914739 | Msa0498480:intron | 30.0% | |
| !!! | TGAAAAGTGTTGTTTTATCC+TGG | + | chr3_4:34914887-34914906 | Msa0498480:intron | 30.0% |
| !!! | TGTTGTTTTATCCTGGTTTT+CGG | + | chr3_4:34914894-34914913 | Msa0498480:intron | 30.0% |
| ! | TACGTTTGAACCTTTTTAAC+CGG | + | chr3_4:34914932-34914951 | Msa0498480:intron | 30.0% |
| ! | TAAGATATCACCGGTTAAAA+AGG | - | chr3_4:34914945-34914964 | None:intergenic | 30.0% |
| TAGGATACTATAGTCGTTAT+GGG | - | chr3_4:34915053-34915072 | None:intergenic | 30.0% | |
| ATAGGATACTATAGTCGTTA+TGG | - | chr3_4:34915054-34915073 | None:intergenic | 30.0% | |
| TAACGACTATAGTATCCTAT+AGG | + | chr3_4:34915054-34915073 | Msa0498480:intron | 30.0% | |
| TTACTAAGTCAAGAATTGGA+GGG | + | chr3_4:34915150-34915169 | Msa0498480:intron | 30.0% | |
| !! | ACATTTTTGGAAGAGAACTA+CGG | - | chr3_4:34915262-34915281 | None:intergenic | 30.0% |
| TTTCAAATCTCATGCCTATA+AGG | - | chr3_4:34915349-34915368 | None:intergenic | 30.0% | |
| AGATTTGAAAAAAAGTGAGG+TGG | + | chr3_4:34915359-34915378 | Msa0498480:intron | 30.0% | |
| TCCCAAGGTTTATTATGAAA+AGG | + | chr3_4:34915475-34915494 | Msa0498480:intron | 30.0% | |
| CTAGTGATTGTATGTTTAGA+TGG | - | chr3_4:34915564-34915583 | None:intergenic | 30.0% | |
| ! | GTCAAAATCTTTTCTTGTCA+TGG | - | chr3_4:34915649-34915668 | None:intergenic | 30.0% |
| AGCATGCATAAAACCATTAC+AGG | - | chr3_4:34913958-34913977 | None:intergenic | 35.0% | |
| ! | AGCATGAGATATCATCGATT+TGG | - | chr3_4:34914002-34914021 | None:intergenic | 35.0% |
| !! | ATCTATTCCAGGAGTGTTTA+TGG | + | chr3_4:34914029-34914048 | Msa0498480:CDS | 35.0% |
| ACACTAATGTGACAAAGTTG+AGG | - | chr3_4:34914243-34914262 | None:intergenic | 35.0% | |
| GATCCCATGATTTATGCAAT+AGG | + | chr3_4:34914389-34914408 | Msa0498480:intron | 35.0% | |
| GACCCTATTGCATAAATCAT+GGG | - | chr3_4:34914395-34914414 | None:intergenic | 35.0% | |
| TGACCCTATTGCATAAATCA+TGG | - | chr3_4:34914396-34914415 | None:intergenic | 35.0% | |
| !! | GTTGTTTTATCCTGGTTTTC+GGG | + | chr3_4:34914895-34914914 | Msa0498480:intron | 35.0% |
| AAAGTAAAGACGGTTCCTAT+AGG | - | chr3_4:34915072-34915091 | None:intergenic | 35.0% | |
| TCTTGACTTAGTAAGCTCTT+AGG | - | chr3_4:34915144-34915163 | None:intergenic | 35.0% | |
| GAGCTTACTAAGTCAAGAAT+TGG | + | chr3_4:34915146-34915165 | Msa0498480:intron | 35.0% | |
| CTTACTAAGTCAAGAATTGG+AGG | + | chr3_4:34915149-34915168 | Msa0498480:intron | 35.0% | |
| TTTGAAGAATGGAGATTGAG+AGG | + | chr3_4:34915323-34915342 | Msa0498480:intron | 35.0% | |
| GTATGTTTAGATGGATGCTT+AGG | - | chr3_4:34915555-34915574 | None:intergenic | 35.0% | |
| !!! | TCATGGGTTTTTAAGTCAAG+TGG | - | chr3_4:34915632-34915651 | None:intergenic | 35.0% |
| ! | GTTTGGGATCTGATGAATTT+GGG | - | chr3_4:34915760-34915779 | None:intergenic | 35.0% |
| AAGGGTGAGAAATTAGGTTT+GGG | - | chr3_4:34915776-34915795 | None:intergenic | 35.0% | |
| ! | GGGTTTGATGGTTAATAAGA+GGG | - | chr3_4:34915853-34915872 | None:intergenic | 35.0% |
| AGCATGCATAAAACCATTAC+AGG | - | chr3_4:34913958-34913977 | None:intergenic | 35.0% | |
| ! | AGCATGAGATATCATCGATT+TGG | - | chr3_4:34914002-34914021 | None:intergenic | 35.0% |
| !! | ATCTATTCCAGGAGTGTTTA+TGG | + | chr3_4:34914029-34914048 | Msa0498480:CDS | 35.0% |
| ACACTAATGTGACAAAGTTG+AGG | - | chr3_4:34914243-34914262 | None:intergenic | 35.0% | |
| GATCCCATGATTTATGCAAT+AGG | + | chr3_4:34914389-34914408 | Msa0498480:intron | 35.0% | |
| GACCCTATTGCATAAATCAT+GGG | - | chr3_4:34914395-34914414 | None:intergenic | 35.0% | |
| TGACCCTATTGCATAAATCA+TGG | - | chr3_4:34914396-34914415 | None:intergenic | 35.0% | |
| !! | GTTGTTTTATCCTGGTTTTC+GGG | + | chr3_4:34914895-34914914 | Msa0498480:intron | 35.0% |
| AAAGTAAAGACGGTTCCTAT+AGG | - | chr3_4:34915072-34915091 | None:intergenic | 35.0% | |
| TCTTGACTTAGTAAGCTCTT+AGG | - | chr3_4:34915144-34915163 | None:intergenic | 35.0% | |
| GAGCTTACTAAGTCAAGAAT+TGG | + | chr3_4:34915146-34915165 | Msa0498480:intron | 35.0% | |
| CTTACTAAGTCAAGAATTGG+AGG | + | chr3_4:34915149-34915168 | Msa0498480:intron | 35.0% | |
| TTTGAAGAATGGAGATTGAG+AGG | + | chr3_4:34915323-34915342 | Msa0498480:intron | 35.0% | |
| GTATGTTTAGATGGATGCTT+AGG | - | chr3_4:34915555-34915574 | None:intergenic | 35.0% | |
| !!! | TCATGGGTTTTTAAGTCAAG+TGG | - | chr3_4:34915632-34915651 | None:intergenic | 35.0% |
| ! | GTTTGGGATCTGATGAATTT+GGG | - | chr3_4:34915760-34915779 | None:intergenic | 35.0% |
| AAGGGTGAGAAATTAGGTTT+GGG | - | chr3_4:34915776-34915795 | None:intergenic | 35.0% | |
| ! | GGGTTTGATGGTTAATAAGA+GGG | - | chr3_4:34915853-34915872 | None:intergenic | 35.0% |
| TGCTCTTCTGAATCTATTCC+AGG | + | chr3_4:34914018-34914037 | Msa0498480:CDS | 40.0% | |
| AACAATGCCATAAACACTCC+TGG | - | chr3_4:34914039-34914058 | None:intergenic | 40.0% | |
| !!! | CCATGTCTGCCATTTTTGAA+CGG | + | chr3_4:34914060-34914079 | Msa0498480:CDS | 40.0% |
| !! | AATCACTAGATGGTGTTGCT+GGG | - | chr3_4:34914092-34914111 | None:intergenic | 40.0% |
| CCATCTAGTGATTGTTGTGT+CGG | + | chr3_4:34914099-34914118 | Msa0498480:CDS | 40.0% | |
| ACAGAGATATCTCCGAAGAT+AGG | - | chr3_4:34914157-34914176 | None:intergenic | 40.0% | |
| !! | TTTTTCGACAGGACTTCCAT+TGG | + | chr3_4:34914194-34914213 | Msa0498480:CDS | 40.0% |
| !! | TTAGCTCTCTCTGAAACCAA+TGG | - | chr3_4:34914213-34914232 | None:intergenic | 40.0% |
| TTACCTACGTACCCGTTTAA+GGG | + | chr3_4:34915226-34915245 | Msa0498480:intron | 40.0% | |
| GTGGATTTGATCCCTTAAAC+GGG | - | chr3_4:34915240-34915259 | None:intergenic | 40.0% | |
| ! | GGTGGATTTGATCCCTTAAA+CGG | - | chr3_4:34915241-34915260 | None:intergenic | 40.0% |
| !! | TTTTTGGAAGAGAACTACGG+TGG | - | chr3_4:34915259-34915278 | None:intergenic | 40.0% |
| !! | ACAATGGGATTTTGATCCCA+AGG | + | chr3_4:34915460-34915479 | Msa0498480:intron | 40.0% |
| ! | GGTTTGGGATCTGATGAATT+TGG | - | chr3_4:34915761-34915780 | None:intergenic | 40.0% |
| GAAGGGTGAGAAATTAGGTT+TGG | - | chr3_4:34915777-34915796 | None:intergenic | 40.0% | |
| ! | CGGGTTTGATGGTTAATAAG+AGG | - | chr3_4:34915854-34915873 | None:intergenic | 40.0% |
| AGAATAGAGGGTTTCAGTGA+GGG | - | chr3_4:34915968-34915987 | None:intergenic | 40.0% | |
| AGGGATTTGCAGAGAATAGA+GGG | - | chr3_4:34915980-34915999 | None:intergenic | 40.0% | |
| ! | AGTGATTCGACAGTTGGTTT+GGG | - | chr3_4:34916011-34916030 | None:intergenic | 40.0% |
| AAGTGATTCGACAGTTGGTT+TGG | - | chr3_4:34916012-34916031 | None:intergenic | 40.0% | |
| ACCAACTGTCGAATCACTTT+CGG | + | chr3_4:34916013-34916032 | Msa0498480:CDS | 40.0% | |
| TGCTCTTCTGAATCTATTCC+AGG | + | chr3_4:34914018-34914037 | Msa0498480:CDS | 40.0% | |
| AACAATGCCATAAACACTCC+TGG | - | chr3_4:34914039-34914058 | None:intergenic | 40.0% | |
| !!! | CCATGTCTGCCATTTTTGAA+CGG | + | chr3_4:34914060-34914079 | Msa0498480:CDS | 40.0% |
| !! | AATCACTAGATGGTGTTGCT+GGG | - | chr3_4:34914092-34914111 | None:intergenic | 40.0% |
| CCATCTAGTGATTGTTGTGT+CGG | + | chr3_4:34914099-34914118 | Msa0498480:CDS | 40.0% | |
| ACAGAGATATCTCCGAAGAT+AGG | - | chr3_4:34914157-34914176 | None:intergenic | 40.0% | |
| !! | TTTTTCGACAGGACTTCCAT+TGG | + | chr3_4:34914194-34914213 | Msa0498480:CDS | 40.0% |
| !! | TTAGCTCTCTCTGAAACCAA+TGG | - | chr3_4:34914213-34914232 | None:intergenic | 40.0% |
| TTACCTACGTACCCGTTTAA+GGG | + | chr3_4:34915226-34915245 | Msa0498480:intron | 40.0% | |
| GTGGATTTGATCCCTTAAAC+GGG | - | chr3_4:34915240-34915259 | None:intergenic | 40.0% | |
| ! | GGTGGATTTGATCCCTTAAA+CGG | - | chr3_4:34915241-34915260 | None:intergenic | 40.0% |
| !! | TTTTTGGAAGAGAACTACGG+TGG | - | chr3_4:34915259-34915278 | None:intergenic | 40.0% |
| !! | ACAATGGGATTTTGATCCCA+AGG | + | chr3_4:34915460-34915479 | Msa0498480:intron | 40.0% |
| ! | GGTTTGGGATCTGATGAATT+TGG | - | chr3_4:34915761-34915780 | None:intergenic | 40.0% |
| GAAGGGTGAGAAATTAGGTT+TGG | - | chr3_4:34915777-34915796 | None:intergenic | 40.0% | |
| ! | CGGGTTTGATGGTTAATAAG+AGG | - | chr3_4:34915854-34915873 | None:intergenic | 40.0% |
| AGAATAGAGGGTTTCAGTGA+GGG | - | chr3_4:34915968-34915987 | None:intergenic | 40.0% | |
| AGGGATTTGCAGAGAATAGA+GGG | - | chr3_4:34915980-34915999 | None:intergenic | 40.0% | |
| ! | AGTGATTCGACAGTTGGTTT+GGG | - | chr3_4:34916011-34916030 | None:intergenic | 40.0% |
| AAGTGATTCGACAGTTGGTT+TGG | - | chr3_4:34916012-34916031 | None:intergenic | 40.0% | |
| ACCAACTGTCGAATCACTTT+CGG | + | chr3_4:34916013-34916032 | Msa0498480:CDS | 40.0% | |
| CCGTTCAAAAATGGCAGACA+TGG | - | chr3_4:34914063-34914082 | None:intergenic | 45.0% | |
| GGGAGAGAACCGTTCAAAAA+TGG | - | chr3_4:34914072-34914091 | None:intergenic | 45.0% | |
| !! | CAATCACTAGATGGTGTTGC+TGG | - | chr3_4:34914093-34914112 | None:intergenic | 45.0% |
| CCGACACAACAATCACTAGA+TGG | - | chr3_4:34914102-34914121 | None:intergenic | 45.0% | |
| GAGATATCTCCGAAGATAGG+TGG | - | chr3_4:34914154-34914173 | None:intergenic | 45.0% | |
| ATGTTTGACACCCGAAAACC+AGG | - | chr3_4:34914908-34914927 | None:intergenic | 45.0% | |
| AGCAAAACCCTTGAGAATCG+AGG | + | chr3_4:34914990-34915009 | Msa0498480:intron | 45.0% | |
| GCGCACGTAGAAAGTAAAGA+CGG | - | chr3_4:34915082-34915101 | None:intergenic | 45.0% | |
| CTTAAACGGGTACGTAGGTA+AGG | - | chr3_4:34915227-34915246 | None:intergenic | 45.0% | |
| CTTACCTACGTACCCGTTTA+AGG | + | chr3_4:34915225-34915244 | Msa0498480:intron | 45.0% | |
| ! | TGGAGATTGAGAGGCCTTAT+AGG | + | chr3_4:34915332-34915351 | Msa0498480:intron | 45.0% |
| TGAGGGAAGGGTGAGAAATT+AGG | - | chr3_4:34915782-34915801 | None:intergenic | 45.0% | |
| TTTGGATCTCGCACAGGAAT+GGG | - | chr3_4:34915806-34915825 | None:intergenic | 45.0% | |
| ATTTGGATCTCGCACAGGAA+TGG | - | chr3_4:34915807-34915826 | None:intergenic | 45.0% | |
| GATGAGAGTTGGCTGAGATT+TGG | - | chr3_4:34915824-34915843 | None:intergenic | 45.0% | |
| CAAACCTTGAGGTGATGAGT+GGG | - | chr3_4:34915921-34915940 | None:intergenic | 45.0% | |
| ACAAACCTTGAGGTGATGAG+TGG | - | chr3_4:34915922-34915941 | None:intergenic | 45.0% | |
| GAGAATAGAGGGTTTCAGTG+AGG | - | chr3_4:34915969-34915988 | None:intergenic | 45.0% | |
| GAGGGATTTGCAGAGAATAG+AGG | - | chr3_4:34915981-34916000 | None:intergenic | 45.0% | |
| !! | TCGACAGTTGGTTTGGGTAA+CGG | - | chr3_4:34916005-34916024 | None:intergenic | 45.0% |
| ACCGAAAGTGATTCGACAGT+TGG | - | chr3_4:34916017-34916036 | None:intergenic | 45.0% | |
| CCGTTCAAAAATGGCAGACA+TGG | - | chr3_4:34914063-34914082 | None:intergenic | 45.0% | |
| GGGAGAGAACCGTTCAAAAA+TGG | - | chr3_4:34914072-34914091 | None:intergenic | 45.0% | |
| !! | CAATCACTAGATGGTGTTGC+TGG | - | chr3_4:34914093-34914112 | None:intergenic | 45.0% |
| CCGACACAACAATCACTAGA+TGG | - | chr3_4:34914102-34914121 | None:intergenic | 45.0% | |
| GAGATATCTCCGAAGATAGG+TGG | - | chr3_4:34914154-34914173 | None:intergenic | 45.0% | |
| ATGTTTGACACCCGAAAACC+AGG | - | chr3_4:34914908-34914927 | None:intergenic | 45.0% | |
| AGCAAAACCCTTGAGAATCG+AGG | + | chr3_4:34914990-34915009 | Msa0498480:intron | 45.0% | |
| GCGCACGTAGAAAGTAAAGA+CGG | - | chr3_4:34915082-34915101 | None:intergenic | 45.0% | |
| CTTAAACGGGTACGTAGGTA+AGG | - | chr3_4:34915227-34915246 | None:intergenic | 45.0% | |
| CTTACCTACGTACCCGTTTA+AGG | + | chr3_4:34915225-34915244 | Msa0498480:intron | 45.0% | |
| ! | TGGAGATTGAGAGGCCTTAT+AGG | + | chr3_4:34915332-34915351 | Msa0498480:intron | 45.0% |
| TGAGGGAAGGGTGAGAAATT+AGG | - | chr3_4:34915782-34915801 | None:intergenic | 45.0% | |
| TTTGGATCTCGCACAGGAAT+GGG | - | chr3_4:34915806-34915825 | None:intergenic | 45.0% | |
| ATTTGGATCTCGCACAGGAA+TGG | - | chr3_4:34915807-34915826 | None:intergenic | 45.0% | |
| GATGAGAGTTGGCTGAGATT+TGG | - | chr3_4:34915824-34915843 | None:intergenic | 45.0% | |
| CAAACCTTGAGGTGATGAGT+GGG | - | chr3_4:34915921-34915940 | None:intergenic | 45.0% | |
| ACAAACCTTGAGGTGATGAG+TGG | - | chr3_4:34915922-34915941 | None:intergenic | 45.0% | |
| GAGAATAGAGGGTTTCAGTG+AGG | - | chr3_4:34915969-34915988 | None:intergenic | 45.0% | |
| GAGGGATTTGCAGAGAATAG+AGG | - | chr3_4:34915981-34916000 | None:intergenic | 45.0% | |
| !! | TCGACAGTTGGTTTGGGTAA+CGG | - | chr3_4:34916005-34916024 | None:intergenic | 45.0% |
| ACCGAAAGTGATTCGACAGT+TGG | - | chr3_4:34916017-34916036 | None:intergenic | 45.0% | |
| !!! | GATAATAAATATTATTTTAA+CGG | - | chr3_4:34914598-34914617 | None:intergenic | 5.0% |
| !!! | ATATAAAATTGTTTTTAAAT+CGG | - | chr3_4:34915697-34915716 | None:intergenic | 5.0% |
| !!! | GATAATAAATATTATTTTAA+CGG | - | chr3_4:34914598-34914617 | None:intergenic | 5.0% |
| !!! | ATATAAAATTGTTTTTAAAT+CGG | - | chr3_4:34915697-34915716 | None:intergenic | 5.0% |
| !!! | GATAGGTGGTGTTGGCCTTT+TGG | - | chr3_4:34914140-34914159 | None:intergenic | 50.0% |
| AGGCCAACACCACCTATCTT+CGG | + | chr3_4:34914142-34914161 | Msa0498480:CDS | 50.0% | |
| TCTCCGAAGATAGGTGGTGT+TGG | - | chr3_4:34914148-34914167 | None:intergenic | 50.0% | |
| AACCCTTGAGAATCGAGGTC+CGG | + | chr3_4:34914995-34915014 | Msa0498480:intron | 50.0% | |
| !! | TCCGGGAGTTGTTTTCGCTA+CGG | + | chr3_4:34915013-34915032 | Msa0498480:intron | 50.0% |
| !! | GAGTTGTTTTCGCTACGGGA+AGG | + | chr3_4:34915018-34915037 | Msa0498480:intron | 50.0% |
| !! | TTTCGCTACGGGAAGGTGTT+AGG | + | chr3_4:34915025-34915044 | Msa0498480:intron | 50.0% |
| GATCCCTTAAACGGGTACGT+AGG | - | chr3_4:34915232-34915251 | None:intergenic | 50.0% | |
| TTGGATCTCGCACAGGAATG+GGG | - | chr3_4:34915805-34915824 | None:intergenic | 50.0% | |
| CTGAGATTTGGATCTCGCAC+AGG | - | chr3_4:34915812-34915831 | None:intergenic | 50.0% | |
| GAGGGTCGATTGATGAGAGT+TGG | - | chr3_4:34915835-34915854 | None:intergenic | 50.0% | |
| GAAACCCACTCATCACCTCA+AGG | + | chr3_4:34915914-34915933 | Msa0498480:CDS | 50.0% | |
| GAGGTTTCGCACAAACCTTG+AGG | - | chr3_4:34915932-34915951 | None:intergenic | 50.0% | |
| !! | GTTGGTTTGGGTAACGGTGA+GGG | - | chr3_4:34915999-34916018 | None:intergenic | 50.0% |
| !! | AGTTGGTTTGGGTAACGGTG+AGG | - | chr3_4:34916000-34916019 | None:intergenic | 50.0% |
| !!! | GATAGGTGGTGTTGGCCTTT+TGG | - | chr3_4:34914140-34914159 | None:intergenic | 50.0% |
| AGGCCAACACCACCTATCTT+CGG | + | chr3_4:34914142-34914161 | Msa0498480:CDS | 50.0% | |
| TCTCCGAAGATAGGTGGTGT+TGG | - | chr3_4:34914148-34914167 | None:intergenic | 50.0% | |
| AACCCTTGAGAATCGAGGTC+CGG | + | chr3_4:34914995-34915014 | Msa0498480:intron | 50.0% | |
| !! | TCCGGGAGTTGTTTTCGCTA+CGG | + | chr3_4:34915013-34915032 | Msa0498480:intron | 50.0% |
| !! | GAGTTGTTTTCGCTACGGGA+AGG | + | chr3_4:34915018-34915037 | Msa0498480:intron | 50.0% |
| !! | TTTCGCTACGGGAAGGTGTT+AGG | + | chr3_4:34915025-34915044 | Msa0498480:intron | 50.0% |
| GATCCCTTAAACGGGTACGT+AGG | - | chr3_4:34915232-34915251 | None:intergenic | 50.0% | |
| TTGGATCTCGCACAGGAATG+GGG | - | chr3_4:34915805-34915824 | None:intergenic | 50.0% | |
| CTGAGATTTGGATCTCGCAC+AGG | - | chr3_4:34915812-34915831 | None:intergenic | 50.0% | |
| GAGGGTCGATTGATGAGAGT+TGG | - | chr3_4:34915835-34915854 | None:intergenic | 50.0% | |
| GAAACCCACTCATCACCTCA+AGG | + | chr3_4:34915914-34915933 | Msa0498480:CDS | 50.0% | |
| GAGGTTTCGCACAAACCTTG+AGG | - | chr3_4:34915932-34915951 | None:intergenic | 50.0% | |
| !! | GTTGGTTTGGGTAACGGTGA+GGG | - | chr3_4:34915999-34916018 | None:intergenic | 50.0% |
| !! | AGTTGGTTTGGGTAACGGTG+AGG | - | chr3_4:34916000-34916019 | None:intergenic | 50.0% |
| ACCCTTGAGAATCGAGGTCC+GGG | + | chr3_4:34914996-34915015 | Msa0498480:intron | 55.0% | |
| TCCCGGACCTCGATTCTCAA+GGG | - | chr3_4:34915000-34915019 | None:intergenic | 55.0% | |
| CCCGTAGCGAAAACAACTCC+CGG | - | chr3_4:34915017-34915036 | None:intergenic | 55.0% | |
| !! | CCGGGAGTTGTTTTCGCTAC+GGG | + | chr3_4:34915014-34915033 | Msa0498480:intron | 55.0% |
| ACAGGAATGGGGTGAGGGAA+GGG | - | chr3_4:34915794-34915813 | None:intergenic | 55.0% | |
| ! | GTGATGAGTGGGTTTCGCGA+CGG | - | chr3_4:34915910-34915929 | None:intergenic | 55.0% |
| TTCAGTGAGGGTGAGGGCTT+TGG | - | chr3_4:34915956-34915975 | None:intergenic | 55.0% | |
| GAGGGTTTCAGTGAGGGTGA+GGG | - | chr3_4:34915962-34915981 | None:intergenic | 55.0% | |
| AGAGGGTTTCAGTGAGGGTG+AGG | - | chr3_4:34915963-34915982 | None:intergenic | 55.0% | |
| ACCCTTGAGAATCGAGGTCC+GGG | + | chr3_4:34914996-34915015 | Msa0498480:intron | 55.0% | |
| TCCCGGACCTCGATTCTCAA+GGG | - | chr3_4:34915000-34915019 | None:intergenic | 55.0% | |
| CCCGTAGCGAAAACAACTCC+CGG | - | chr3_4:34915017-34915036 | None:intergenic | 55.0% | |
| !! | CCGGGAGTTGTTTTCGCTAC+GGG | + | chr3_4:34915014-34915033 | Msa0498480:intron | 55.0% |
| ACAGGAATGGGGTGAGGGAA+GGG | - | chr3_4:34915794-34915813 | None:intergenic | 55.0% | |
| ! | GTGATGAGTGGGTTTCGCGA+CGG | - | chr3_4:34915910-34915929 | None:intergenic | 55.0% |
| TTCAGTGAGGGTGAGGGCTT+TGG | - | chr3_4:34915956-34915975 | None:intergenic | 55.0% | |
| GAGGGTTTCAGTGAGGGTGA+GGG | - | chr3_4:34915962-34915981 | None:intergenic | 55.0% | |
| AGAGGGTTTCAGTGAGGGTG+AGG | - | chr3_4:34915963-34915982 | None:intergenic | 55.0% | |
| CTCCCGGACCTCGATTCTCA+AGG | - | chr3_4:34915001-34915020 | None:intergenic | 60.0% | |
| CACAGGAATGGGGTGAGGGA+AGG | - | chr3_4:34915795-34915814 | None:intergenic | 60.0% | |
| CTCGCACAGGAATGGGGTGA+GGG | - | chr3_4:34915799-34915818 | None:intergenic | 60.0% | |
| TCTCGCACAGGAATGGGGTG+AGG | - | chr3_4:34915800-34915819 | None:intergenic | 60.0% | |
| TGGATGTGCGGGTTTCGCGA+CGG | - | chr3_4:34915880-34915899 | None:intergenic | 60.0% | |
| ! | ATGAGTGGGTTTCGCGACGG+AGG | - | chr3_4:34915907-34915926 | None:intergenic | 60.0% |
| ! | TGAGGGTGAGGGCTTTGGTG+AGG | - | chr3_4:34915951-34915970 | None:intergenic | 60.0% |
| CTCCCGGACCTCGATTCTCA+AGG | - | chr3_4:34915001-34915020 | None:intergenic | 60.0% | |
| CACAGGAATGGGGTGAGGGA+AGG | - | chr3_4:34915795-34915814 | None:intergenic | 60.0% | |
| CTCGCACAGGAATGGGGTGA+GGG | - | chr3_4:34915799-34915818 | None:intergenic | 60.0% | |
| TCTCGCACAGGAATGGGGTG+AGG | - | chr3_4:34915800-34915819 | None:intergenic | 60.0% | |
| TGGATGTGCGGGTTTCGCGA+CGG | - | chr3_4:34915880-34915899 | None:intergenic | 60.0% | |
| ! | ATGAGTGGGTTTCGCGACGG+AGG | - | chr3_4:34915907-34915926 | None:intergenic | 60.0% |
| ! | TGAGGGTGAGGGCTTTGGTG+AGG | - | chr3_4:34915951-34915970 | None:intergenic | 60.0% |
| ATGTGCGGGTTTCGCGACGG+CGG | - | chr3_4:34915877-34915896 | None:intergenic | 65.0% | |
| ACGGAGGTGGGTGGATGTGC+GGG | - | chr3_4:34915891-34915910 | None:intergenic | 65.0% | |
| GACGGAGGTGGGTGGATGTG+CGG | - | chr3_4:34915892-34915911 | None:intergenic | 65.0% | |
| GTGGGTTTCGCGACGGAGGT+GGG | - | chr3_4:34915903-34915922 | None:intergenic | 65.0% | |
| ! | AGTGGGTTTCGCGACGGAGG+TGG | - | chr3_4:34915904-34915923 | None:intergenic | 65.0% |
| ATGTGCGGGTTTCGCGACGG+CGG | - | chr3_4:34915877-34915896 | None:intergenic | 65.0% | |
| ACGGAGGTGGGTGGATGTGC+GGG | - | chr3_4:34915891-34915910 | None:intergenic | 65.0% | |
| GACGGAGGTGGGTGGATGTG+CGG | - | chr3_4:34915892-34915911 | None:intergenic | 65.0% | |
| GTGGGTTTCGCGACGGAGGT+GGG | - | chr3_4:34915903-34915922 | None:intergenic | 65.0% | |
| ! | AGTGGGTTTCGCGACGGAGG+TGG | - | chr3_4:34915904-34915923 | None:intergenic | 65.0% |
| GGTTTCGCGACGGAGGTGGG+TGG | - | chr3_4:34915900-34915919 | None:intergenic | 70.0% | |
| GGTTTCGCGACGGAGGTGGG+TGG | - | chr3_4:34915900-34915919 | None:intergenic | 70.0% | |
| ! | CGCGACGGCGGCGGGTTTGA+TGG | - | chr3_4:34915865-34915884 | None:intergenic | 75.0% |
| TGCGGGTTTCGCGACGGCGG+CGG | - | chr3_4:34915874-34915893 | None:intergenic | 75.0% | |
| ! | CGCGACGGCGGCGGGTTTGA+TGG | - | chr3_4:34915865-34915884 | None:intergenic | 75.0% |
| TGCGGGTTTCGCGACGGCGG+CGG | - | chr3_4:34915874-34915893 | None:intergenic | 75.0% | |
| ! | GCGGGTTTCGCGACGGCGGC+GGG | - | chr3_4:34915873-34915892 | None:intergenic | 80.0% |
| ! | GCGGGTTTCGCGACGGCGGC+GGG | - | chr3_4:34915873-34915892 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 34913934 | 34916063 | 34913934 | ID=Msa0498480;Name=Msa0498480 |
| chr3_4 | mRNA | 34913934 | 34916063 | 34913934 | ID=Msa0498480-mRNA-1;Parent=Msa0498480;Name=Msa0498480-mRNA-1;_AED=0.32;_eAED=0.55;_QI=0|0|0|1|1|1|2|0|216 |
| chr3_4 | exon | 34913934 | 34914291 | 34913934 | ID=Msa0498480-mRNA-1:exon:7376;Parent=Msa0498480-mRNA-1 |
| chr3_4 | exon | 34915771 | 34916063 | 34915771 | ID=Msa0498480-mRNA-1:exon:7377;Parent=Msa0498480-mRNA-1 |
| chr3_4 | CDS | 34913934 | 34914291 | 34913934 | ID=Msa0498480-mRNA-1:cds;Parent=Msa0498480-mRNA-1 |
| chr3_4 | CDS | 34915771 | 34916063 | 34915771 | ID=Msa0498480-mRNA-1:cds;Parent=Msa0498480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
