AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0502280

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0502280 MtrunA17_Chr3g0100961 78.251 915 179 8 1 908 1 902 0.0 1405
Msa0502280 MtrunA17_Chr3g0100831 75.216 924 210 7 1 917 1 912 0.0 1363
Msa0502280 MtrunA17_Chr3g0100971 84.345 741 105 4 1 737 1 734 0.0 1251
Msa0502280 MtrunA17_Chr3g0100851 79.073 798 147 3 108 904 1 779 0.0 1240
Msa0502280 MtrunA17_Chr3g0100801 75.453 827 145 6 4 829 1 770 0.0 1211
Msa0502280 MtrunA17_Chr3g0112511 69.594 911 261 6 1 908 1 898 0.0 1211
Msa0502280 MtrunA17_Chr3g0100761 79.757 741 99 6 1 737 1 694 0.0 1162
Msa0502280 MtrunA17_Chr3g0101321 60.566 918 337 12 1 908 1 903 0.0 1031
Msa0502280 MtrunA17_Chr1g0189351 60.044 906 327 12 1 882 1 895 0.0 1016
Msa0502280 MtrunA17_Chr3g0101331 60.133 903 333 10 1 880 1 899 0.0 1006
Msa0502280 MtrunA17_Chr3g0100731 76.497 668 150 3 243 908 1 663 0.0 992
Msa0502280 MtrunA17_Chr3g0100681 77.342 587 128 1 185 771 1 582 0.0 880
Msa0502280 MtrunA17_Chr3g0101271 50.445 898 414 13 21 908 8 884 0.0 825
Msa0502280 MtrunA17_Chr3g0101241 50.334 898 415 13 21 908 8 884 0.0 822
Msa0502280 MtrunA17_Chr3g0101201 49.077 921 435 15 5 908 15 918 0.0 813
Msa0502280 MtrunA17_Chr3g0101231 49.083 927 442 15 5 911 13 929 0.0 809
Msa0502280 MtrunA17_Chr3g0080601 46.845 935 457 16 1 909 1 921 0.0 781
Msa0502280 MtrunA17_Chr3g0101011 48.623 944 436 23 1 908 1 931 0.0 780
Msa0502280 MtrunA17_Chr3g0101181 49.776 892 414 13 19 887 29 909 0.0 779
Msa0502280 MtrunA17_Chr3g0080741 45.299 936 471 15 1 908 1 923 0.0 773
Msa0502280 MtrunA17_Chr3g0101221 48.318 892 437 13 11 886 13 896 0.0 764
Msa0502280 MtrunA17_Chr3g0080791 45.824 934 468 15 1 909 1 921 0.0 756
Msa0502280 MtrunA17_Chr3g0080771 45.513 936 468 15 1 909 1 921 0.0 754
Msa0502280 MtrunA17_Chr3g0080751 45.037 937 471 14 1 908 1 922 0.0 753
Msa0502280 MtrunA17_Chr1g0151481 45.989 935 464 15 1 908 1 921 0.0 751
Msa0502280 MtrunA17_Chr3g0094301 45.027 935 475 14 1 909 1 922 0.0 749
Msa0502280 MtrunA17_Chr7g0229761 45.027 935 475 14 1 909 1 922 0.0 749
Msa0502280 MtrunA17_Chr3g0101251 47.002 934 419 20 1 913 1 879 0.0 739
Msa0502280 MtrunA17_Chr3g0080731 44.099 932 488 12 1 909 1 922 0.0 728
Msa0502280 MtrunA17_Chr3g0081391 44.313 932 486 10 1 909 1 922 0.0 719
Msa0502280 MtrunA17_Chr3g0081211 44.791 931 482 10 1 909 1 921 0.0 710
Msa0502280 MtrunA17_Chr3g0081341 44.791 931 480 13 1 908 66 985 0.0 702
Msa0502280 MtrunA17_Chr3g0080631 41.845 932 462 13 1 908 1 876 0.0 682
Msa0502280 MtrunA17_Chr3g0081191 42.427 931 499 11 1 908 1 917 0.0 674
Msa0502280 MtrunA17_Chr3g0100791 78.330 443 90 2 463 904 1 438 0.0 665
Msa0502280 MtrunA17_Chr3g0081361 43.060 915 482 13 19 908 27 927 0.0 659
Msa0502280 MtrunA17_Chr3g0100781 86.290 372 51 0 1 372 1 372 0.0 655
Msa0502280 MtrunA17_Chr3g0081371 42.489 932 495 14 3 908 11 927 0.0 645
Msa0502280 MtrunA17_Chr3g0100701 72.017 461 119 4 449 908 282 733 0.0 621
Msa0502280 MtrunA17_Chr3g0100701 72.792 283 72 2 1 279 1 282 1.15e-134 421
Msa0502280 MtrunA17_Chr3g0081181 41.075 930 503 13 1 909 1 906 0.0 619
Msa0502280 MtrunA17_Chr3g0101391 54.310 580 249 7 317 885 2 576 0.0 578
Msa0502280 MtrunA17_Chr5g0410001 37.620 941 542 21 1 920 1 917 0.0 559
Msa0502280 MtrunA17_Chr5g0410031 37.421 946 542 20 1 920 1 922 5.88e-180 545
Msa0502280 MtrunA17_Chr3g0084351 48.668 563 273 9 71 625 1 555 4.67e-173 514
Msa0502280 MtrunA17_Chr1g0189271 71.517 323 92 0 161 483 1 323 7.75e-165 484
Msa0502280 MtrunA17_Chr5g0410021 36.508 945 540 23 1 917 1 913 3.59e-160 494
Msa0502280 MtrunA17_Chr5g0409971 35.381 944 555 21 1 917 1 916 4.16e-159 491
Msa0502280 MtrunA17_Chr3g0080721 41.617 668 362 11 259 909 2 658 5.36e-159 482
Msa0502280 MtrunA17_Chr5g0409991 36.220 947 543 22 1 920 1 913 1.12e-157 487
Msa0502280 MtrunA17_Chr3g0101211 55.231 411 173 5 200 609 1 401 7.99e-148 443
Msa0502280 MtrunA17_Chr3g0080651 41.225 604 323 12 324 908 246 836 1.25e-128 409
Msa0502280 MtrunA17_Chr3g0080651 56.951 223 87 5 1 216 4 224 2.11e-63 230
Msa0502280 MtrunA17_Chr3g0101421 64.931 288 94 3 1 282 1 287 7.71e-127 384
Msa0502280 MtrunA17_Chr5g0444301 51.333 450 205 6 441 882 1 444 2.73e-119 370
Msa0502280 MtrunA17_Chr1g0149071 40.962 603 205 12 230 832 1 452 4.02e-117 365
Msa0502280 MtrunA17_Chr3g0100721 83.562 219 36 0 1 219 1 219 1.38e-113 347
Msa0502280 MtrunA17_Chr5g0404741 31.760 932 564 20 1 897 1 895 3.52e-113 369
Msa0502280 MtrunA17_Chr4g0037421 31.342 954 560 31 1 890 38 960 1.23e-107 355
Msa0502280 MtrunA17_Chr3g0101361 43.552 473 240 9 462 908 295 766 3.97e-102 335
Msa0502280 MtrunA17_Chr3g0101361 48.754 281 134 4 5 279 15 291 6.35e-72 253
Msa0502280 MtrunA17_Chr7g0219851 30.278 971 581 33 1 911 3 937 7.77e-98 328
Msa0502280 MtrunA17_Chr2g0299001 28.378 962 608 29 1 916 1 927 6.17e-97 325
Msa0502280 MtrunA17_Chr1g0189281 45.431 383 183 7 511 878 2 373 1.60e-87 284
Msa0502280 MtrunA17_Chr1g0189321 61.250 240 85 3 404 637 1 238 1.65e-84 271
Msa0502280 MtrunA17_Chr3g0096971 70.286 175 52 0 262 436 1 175 2.04e-75 244
Msa0502280 MtrunA17_Chr3g0101341 49.632 272 118 5 23 279 1 268 6.33e-74 244
Msa0502280 MtrunA17_Chr3g0101401 61.957 184 64 2 86 263 1 184 2.35e-69 228
Msa0502280 MtrunA17_Chr5g0430721 27.370 939 576 30 1 895 42 918 2.92e-69 249
Msa0502280 MtrunA17_Chr5g0414311 27.095 919 568 34 1 868 1 868 2.98e-68 247
Msa0502280 MtrunA17_Chr1g0197241 26.580 918 557 27 22 880 668 1527 6.20e-68 248
Msa0502280 MtrunA17_Chr6g0467961 29.275 690 438 19 1 684 1 646 8.43e-68 243
Msa0502280 MtrunA17_Chr1g0189551 27.373 906 533 31 19 898 51 857 1.86e-67 242
Msa0502280 MtrunA17_Chr3g0092261 27.144 921 573 34 28 898 83 955 3.22e-66 242
Msa0502280 MtrunA17_Chr1g0164611 28.189 784 468 32 42 776 52 789 8.97e-66 239
Msa0502280 MtrunA17_Chr3g0082101 28.497 765 438 31 42 776 52 737 1.12e-65 238
Msa0502280 MtrunA17_Chr6g0468151 27.706 924 551 37 1 884 1 847 1.57e-65 239
Msa0502280 MtrunA17_Chr7g0257541 26.265 929 539 30 3 882 2 833 1.61e-65 236
Msa0502280 MtrunA17_Chr5g0414181 27.419 930 559 34 1 877 1 867 1.12e-64 235
Msa0502280 MtrunA17_Chr3g0080701 55.204 221 83 5 1 209 1 217 1.21e-64 217
Msa0502280 MtrunA17_Chr2g0309721 26.139 922 569 36 33 898 43 908 1.93e-64 236
Msa0502280 MtrunA17_Chr7g0248221 27.792 806 484 30 19 773 23 781 2.81e-64 233
Msa0502280 MtrunA17_Chr5g0415471 27.457 936 568 34 1 884 1 877 3.15e-64 235
Msa0502280 MtrunA17_Chr6g0468121 28.674 694 440 20 1 684 1 649 4.20e-64 235
Msa0502280 MtrunA17_Chr6g0468021 28.199 805 502 27 1 784 1 750 4.41e-64 235
Msa0502280 MtrunA17_Chr3g0091081 26.455 945 572 40 31 902 41 935 1.86e-61 228
Msa0502280 MtrunA17_Chr3g0090651 27.083 912 558 40 42 898 52 911 2.20e-61 226
Msa0502280 MtrunA17_Chr1g0164391 26.063 917 554 33 38 885 47 908 2.65e-61 227
Msa0502280 MtrunA17_Chr3g0092241 26.458 926 564 38 33 898 43 911 3.55e-61 226
Msa0502280 MtrunA17_Chr6g0470081 29.143 700 432 27 1 684 1 652 4.07e-61 226
Msa0502280 MtrunA17_Chr5g0430621 25.589 934 537 35 1 887 1 823 9.42e-61 224
Msa0502280 MtrunA17_Chr8g0352831 26.962 790 498 28 40 785 50 804 1.05e-60 225
Msa0502280 MtrunA17_Chr3g0089911 27.364 698 399 21 28 681 38 671 1.05e-60 219
Msa0502280 MtrunA17_Chr3g0082311 27.051 902 552 35 38 885 47 896 1.30e-60 224
Msa0502280 MtrunA17_Chr8g0355411 26.754 912 550 33 9 898 15 830 2.24e-60 221
Msa0502280 MtrunA17_Chr6g0470011 27.601 913 562 37 1 882 1 845 2.55e-60 224
Msa0502280 MtrunA17_Chr3g0082871 25.672 744 450 25 3 708 2 680 2.58e-60 219
Msa0502280 MtrunA17_Chr3g0082391 27.461 823 503 32 1 774 1 778 3.28e-60 220
Msa0502280 MtrunA17_Chr3g0123111 27.730 696 446 21 1 686 1 649 3.56e-60 223
Msa0502280 MtrunA17_Chr3g0089501 27.089 790 470 28 33 774 41 772 3.91e-60 221
Msa0502280 MtrunA17_Chr3g0089601 27.342 790 468 28 33 774 41 772 8.49e-60 220
Msa0502280 MtrunA17_Chr7g0248531 26.544 923 557 38 42 908 50 907 8.61e-60 220
Msa0502280 MtrunA17_Chr7g0257221 25.866 924 555 26 1 884 1 834 1.04e-59 219
Msa0502280 MtrunA17_Chr6g0468101 26.595 925 546 35 1 889 1 828 1.18e-59 221
Msa0502280 MtrunA17_Chr3g0082351 26.409 905 566 33 33 886 42 897 1.47e-59 221
Msa0502280 MtrunA17_Chr3g0091061 27.113 911 559 39 42 898 52 911 1.80e-59 221
Msa0502280 MtrunA17_Chr6g0468451 27.260 708 431 23 1 684 1 648 1.95e-59 221
Msa0502280 MtrunA17_Chr4g0025391 25.683 915 573 33 17 875 27 890 2.95e-59 221
Msa0502280 MtrunA17_Chr1g0155321 26.172 917 534 31 1 867 1 824 3.07e-59 219
Msa0502280 MtrunA17_Chr5g0430291 25.910 934 587 34 1 889 1 874 4.84e-59 219
Msa0502280 MtrunA17_Chr3g0089871 26.944 913 555 39 31 884 41 900 5.34e-59 220
Msa0502280 MtrunA17_Chr1g0155991 26.981 934 560 33 1 887 1 859 6.99e-59 218
Msa0502280 MtrunA17_Chr3g0082131 27.483 906 533 39 42 878 50 900 7.63e-59 219
Msa0502280 MtrunA17_Chr5g0431051 26.269 906 516 35 1 865 1 795 9.20e-59 218
Msa0502280 MtrunA17_Chr3g0090691 25.918 926 556 37 42 890 52 924 9.21e-59 219
Msa0502280 MtrunA17_Chr3g0089991 26.343 782 490 27 33 774 43 778 1.92e-58 218
Msa0502280 MtrunA17_Chr3g0100981 78.261 138 30 0 774 911 1 138 2.50e-58 196
Msa0502280 MtrunA17_Chr3g0100771 78.261 138 30 0 774 911 1 138 2.50e-58 196
Msa0502280 MtrunA17_Chr3g0089651 25.918 926 574 36 33 898 43 916 4.97e-58 217
Msa0502280 MtrunA17_Chr3g0090141 25.112 896 559 33 41 877 51 893 1.10e-57 216
Msa0502280 MtrunA17_Chr3g0089761 25.959 886 526 35 63 877 67 893 1.20e-57 216
Msa0502280 MtrunA17_Chr5g0430141 25.727 894 540 32 1 865 1 799 1.52e-57 214
Msa0502280 MtrunA17_Chr1g0197201 25.260 962 574 30 15 893 453 1352 2.07e-57 215
Msa0502280 MtrunA17_Chr8g0352861 25.383 914 568 34 28 877 38 901 2.67e-57 214
Msa0502280 MtrunA17_Chr4g0009781 28.988 583 362 16 125 684 119 672 6.84e-57 213
Msa0502280 MtrunA17_Chr6g0468271 26.866 804 515 26 1 784 1 751 7.36e-57 213
Msa0502280 MtrunA17_Chr8g0337891 27.136 667 424 23 15 662 20 643 7.39e-57 209
Msa0502280 MtrunA17_Chr1g0169901 28.409 792 473 31 34 785 43 780 7.41e-57 213
Msa0502280 MtrunA17_Chr6g0467911 27.805 820 500 36 1 786 1 762 1.20e-56 209
Msa0502280 MtrunA17_Chr5g0429961 26.009 892 531 32 1 865 1 790 1.40e-56 211
Msa0502280 MtrunA17_Chr8g0338261 23.608 970 642 31 1 909 1 932 1.50e-56 211
Msa0502280 MtrunA17_Chr3g0085931 29.167 696 435 26 1 684 1 650 1.67e-56 212
Msa0502280 MtrunA17_Chr5g0433771 27.567 711 438 22 5 682 9 675 1.84e-56 210
Msa0502280 MtrunA17_Chr3g0085651 26.355 941 587 37 1 884 1 892 2.17e-56 212
Msa0502280 MtrunA17_Chr3g0086161 25.348 935 583 38 1 882 1 873 4.73e-56 211
Msa0502280 MtrunA17_Chr7g0248431 30.385 520 303 19 19 513 23 508 7.97e-56 203
Msa0502280 MtrunA17_Chr3g0090371 24.917 899 559 35 41 880 51 892 8.40e-56 210
Msa0502280 MtrunA17_Chr3g0089541 25.429 932 569 36 33 898 43 914 1.19e-55 209
Msa0502280 MtrunA17_Chr3g0089251 27.553 940 536 44 33 898 72 940 1.25e-55 209
Msa0502280 MtrunA17_Chr3g0086221 25.806 930 578 36 1 877 1 871 1.26e-55 209
Msa0502280 MtrunA17_Chr3g0089421 26.377 944 544 39 33 898 43 913 1.28e-55 209
Msa0502280 MtrunA17_Chr3g0082891 24.444 945 554 32 3 901 2 832 1.77e-55 207
Msa0502280 MtrunA17_Chr3g0089811 26.474 933 556 43 33 898 43 912 2.07e-55 209
Msa0502280 MtrunA17_Chr5g0414201 26.059 921 568 34 1 868 1 861 2.41e-55 207
Msa0502280 MtrunA17_Chr3g0086151 26.561 881 560 34 38 882 42 871 2.82e-55 206
Msa0502280 MtrunA17_Chr3g0086181 26.220 881 562 31 38 882 42 870 3.50e-55 206
Msa0502280 MtrunA17_Chr8g0348931 26.658 784 491 27 33 776 43 782 3.54e-55 208
Msa0502280 MtrunA17_Chr3g0082881 25.446 841 513 30 3 783 2 788 4.51e-55 206
Msa0502280 MtrunA17_Chr3g0087841 25.467 911 560 39 33 882 43 895 4.62e-55 207
Msa0502280 MtrunA17_Chr8g0346831 26.540 682 441 22 1 661 1 643 5.39e-55 207
Msa0502280 MtrunA17_Chr7g0244231 25.492 914 542 32 1 867 1 822 5.60e-55 207
Msa0502280 MtrunA17_Chr7g0257201 27.086 683 425 21 19 665 23 668 8.86e-55 205
Msa0502280 MtrunA17_Chr3g0089781 26.423 931 558 37 33 898 43 911 9.61e-55 206
Msa0502280 MtrunA17_Chr2g0316291 25.258 871 549 33 5 823 9 829 1.00e-54 206
Msa0502280 MtrunA17_Chr5g0430511 25.574 915 549 35 1 867 1 831 1.23e-54 206
Msa0502280 MtrunA17_Chr3g0100911 48.085 235 115 2 626 858 1 230 1.27e-54 189
Msa0502280 MtrunA17_Chr3g0081841 47.196 214 109 1 161 374 1 210 1.32e-54 197
Msa0502280 MtrunA17_Chr3g0081841 41.935 155 88 2 437 589 189 343 1.20e-25 112
Msa0502280 MtrunA17_Chr3g0089211 26.747 916 535 38 33 877 90 940 1.60e-54 206
Msa0502280 MtrunA17_Chr3g0089961 25.705 922 564 40 33 888 43 909 1.80e-54 204
Msa0502280 MtrunA17_Chr6g0468341 29.746 511 316 14 1 498 1 481 2.13e-54 204
Msa0502280 MtrunA17_Chr1g0169951 27.360 731 438 23 1 684 1 685 2.87e-54 202
Msa0502280 MtrunA17_Chr4g0010221 30.068 592 364 20 125 696 119 680 3.84e-54 204
Msa0502280 MtrunA17_Chr5g0430441 26.856 741 448 25 1 712 1 676 4.06e-54 204
Msa0502280 MtrunA17_Chr4g0010261 29.131 587 356 20 125 684 119 672 7.54e-54 203
Msa0502280 MtrunA17_Chr3g0082811 27.477 666 407 24 156 785 146 771 1.77e-53 200
Msa0502280 MtrunA17_Chr6g0468331 26.201 687 419 21 1 637 1 649 1.87e-53 199
Msa0502280 MtrunA17_Chr3g0090431 26.358 755 477 29 188 898 63 782 2.26e-53 202
Msa0502280 MtrunA17_Chr6g0471941 26.991 678 429 21 5 661 9 641 3.58e-53 201
Msa0502280 MtrunA17_Chr3g0087701 26.374 819 526 29 1 785 1 776 4.02e-53 201
Msa0502280 MtrunA17_Chr3g0100841 83.962 106 17 0 1 106 1 106 4.50e-53 180
Msa0502280 MtrunA17_Chr5g0430641 25.468 962 563 36 1 895 1 875 4.66e-53 201
Msa0502280 MtrunA17_Chr3g0101351 47.345 226 110 5 2 222 14 235 7.64e-53 186
Msa0502280 MtrunA17_Chr4g0027251 26.297 829 508 31 1 785 1 770 9.89e-53 200
Msa0502280 MtrunA17_Chr3g0089591 24.932 734 475 24 33 738 43 728 1.00e-52 201
Msa0502280 MtrunA17_Chr1g0189301 66.176 136 39 2 66 197 1 133 1.04e-52 180
Msa0502280 MtrunA17_Chr5g0430581 24.249 932 605 29 1 895 1 868 1.09e-52 199
Msa0502280 MtrunA17_Chr3g0086621 25.850 882 560 34 38 878 42 870 2.04e-52 199
Msa0502280 MtrunA17_Chr8g0338391 25.571 700 429 23 5 653 9 667 3.14e-52 198
Msa0502280 MtrunA17_Chr3g0089471 25.850 735 468 26 31 738 41 725 5.21e-52 198
Msa0502280 MtrunA17_Chr4g0010201 28.523 589 356 22 125 684 119 671 7.26e-52 197
Msa0502280 MtrunA17_Chr5g0429951 27.273 715 421 27 1 668 1 663 8.88e-52 197
Msa0502280 MtrunA17_Chr3g0090401 24.153 915 562 38 41 898 262 1101 2.26e-51 196
Msa0502280 MtrunA17_Chr7g0257191 26.167 707 444 20 19 686 23 690 2.29e-51 194
Msa0502280 MtrunA17_Chr6g0475491 26.199 542 355 14 5 531 9 520 2.44e-51 194
Msa0502280 MtrunA17_Chr4g0020501 28.638 646 352 23 64 680 23 588 2.72e-51 195
Msa0502280 MtrunA17_Chr3g0087581 26.102 885 557 33 38 878 42 873 2.89e-51 196
Msa0502280 MtrunA17_Chr4g0051651 25.867 692 412 24 1 633 20 669 4.18e-51 191
Msa0502280 MtrunA17_Chr2g0282991 25.510 784 507 28 34 783 44 784 5.51e-51 195
Msa0502280 MtrunA17_Chr3g0113481 25.498 753 480 24 64 785 66 768 5.69e-51 192
Msa0502280 MtrunA17_Chr1g0164581 26.932 906 514 38 42 878 50 876 9.15e-51 194
Msa0502280 MtrunA17_Chr3g0113791 25.481 832 523 31 40 834 48 819 1.37e-50 194
Msa0502280 MtrunA17_Chr5g0446611 25.913 849 499 39 34 819 44 825 1.55e-50 192
Msa0502280 MtrunA17_Chr3g0085451 28.010 764 466 32 166 884 140 864 2.40e-50 193
Msa0502280 MtrunA17_Chr5g0430951 25.641 741 472 25 1 703 1 700 3.23e-50 191
Msa0502280 MtrunA17_Chr1g0164631 25.055 910 569 34 42 886 51 912 3.83e-50 192
Msa0502280 MtrunA17_Chr3g0100691 76.119 134 32 0 774 907 1 134 1.44e-49 171
Msa0502280 MtrunA17_Chr3g0083621 25.945 952 551 39 17 873 1 893 6.38e-49 189
Msa0502280 MtrunA17_Chr6g0470021 28.321 685 420 27 118 774 1 642 6.46e-49 187
Msa0502280 MtrunA17_Chr2g0299091 25.853 909 555 35 38 878 14 871 6.91e-49 188
Msa0502280 MtrunA17_Chr1g0147141 25.858 874 535 40 64 883 81 895 7.07e-49 188
Msa0502280 MtrunA17_Chr7g0221481 25.333 825 512 30 1 774 1 772 7.50e-49 187
Msa0502280 MtrunA17_Chr5g0414231 26.136 528 341 11 1 511 1 496 8.11e-49 181
Msa0502280 MtrunA17_Chr3g0085471 24.669 981 592 40 33 916 41 971 9.77e-49 188
Msa0502280 MtrunA17_Chr3g0085501 26.035 749 464 29 1 704 1 704 1.69e-48 187
Msa0502280 MtrunA17_Chr4g0010251 30.707 495 301 17 205 684 200 667 1.91e-48 186
Msa0502280 MtrunA17_Chr8g0338671 27.926 487 326 13 160 637 39 509 4.96e-48 181
Msa0502280 MtrunA17_Chr8g0338621 23.746 678 450 21 5 661 9 640 6.02e-48 182
Msa0502280 MtrunA17_Chr3g0085331 25.301 747 472 26 1 704 1 704 6.29e-48 186
Msa0502280 MtrunA17_Chr8g0351821 29.087 471 294 15 1 463 1 439 1.87e-47 176
Msa0502280 MtrunA17_Chr5g0415511 25.641 585 374 14 1 558 1 551 1.92e-47 181
Msa0502280 MtrunA17_Chr2g0299151 26.263 792 468 33 33 776 42 765 4.09e-47 183
Msa0502280 MtrunA17_Chr3g0087541 25.837 956 574 36 1 882 1 895 5.89e-47 182
Msa0502280 MtrunA17_Chr3g0089931 27.668 506 299 13 22 511 32 486 6.05e-47 176
Msa0502280 MtrunA17_Chr3g0091041 30.064 469 268 18 60 513 64 487 1.81e-46 175
Msa0502280 MtrunA17_Chr7g0218941 24.644 702 457 20 5 689 9 655 1.94e-46 180
Msa0502280 MtrunA17_Chr6g0484551 25.413 787 465 36 34 777 44 751 5.62e-46 178
Msa0502280 MtrunA17_Chr5g0430331 28.931 477 269 16 1 455 1 429 1.43e-45 170
Msa0502280 MtrunA17_Chr3g0085561 26.372 656 393 23 33 661 41 633 2.55e-45 177
Msa0502280 MtrunA17_Chr3g0084971 26.118 850 507 35 29 828 39 817 3.78e-45 177
Msa0502280 MtrunA17_Chr3g0082791 25.501 898 561 34 38 887 49 886 4.61e-45 176
Msa0502280 MtrunA17_Chr3g0085801 25.268 839 491 34 1 785 1 757 1.85e-44 174
Msa0502280 MtrunA17_Chr2g0299101 25.208 722 447 24 38 715 40 712 2.39e-44 173
Msa0502280 MtrunA17_Chr3g0086091 27.731 714 451 27 204 881 2 686 4.22e-44 172
Msa0502280 MtrunA17_Chr2g0299121 25.054 918 551 36 38 878 40 897 5.49e-44 172
Msa0502280 MtrunA17_Chr8g0344071 30.223 493 282 15 167 636 444 897 7.53e-44 172
Msa0502280 MtrunA17_Chr3g0084051 25.521 768 480 26 64 785 67 788 3.39e-43 170
Msa0502280 MtrunA17_Chr3g0085751 24.014 887 577 35 38 878 39 874 4.20e-43 170
Msa0502280 MtrunA17_Chr3g0083751 25.138 903 548 33 45 878 56 899 4.66e-43 170
Msa0502280 MtrunA17_Chr3g0084081 25.254 887 571 32 38 882 47 883 5.61e-43 170
Msa0502280 MtrunA17_Chr4g0008461 27.867 750 443 34 194 878 159 875 5.75e-43 170
Msa0502280 MtrunA17_Chr3g0101171 67.290 107 34 1 431 537 6 111 1.12e-42 150
Msa0502280 MtrunA17_Chr8g0356251 24.742 873 540 33 100 902 114 939 1.16e-42 169
Msa0502280 MtrunA17_Chr3g0084031 25.077 650 418 20 64 684 69 678 1.31e-42 169
Msa0502280 MtrunA17_Chr5g0417301 25.727 653 384 19 1 639 1 566 1.07e-41 162
Msa0502280 MtrunA17_Chr8g0338251 23.962 530 346 14 1 514 1 489 2.88e-41 162
Msa0502280 MtrunA17_Chr1g0159111 25.139 720 466 27 194 868 174 865 3.11e-41 164
Msa0502280 MtrunA17_Chr3g0085131 25.198 885 574 31 38 887 43 874 3.31e-41 164
Msa0502280 MtrunA17_Chr3g0082321 25.259 772 445 30 38 774 47 721 3.90e-41 162
Msa0502280 MtrunA17_Chr3g0089431 26.154 455 283 13 33 468 43 463 7.82e-41 157
Msa0502280 MtrunA17_Chr3g0078361 26.984 441 278 15 200 611 1 426 2.77e-40 154
Msa0502280 MtrunA17_Chr4g0071021 25.203 492 291 14 1 472 1 435 3.16e-40 154
Msa0502280 MtrunA17_Chr5g0430901 28.049 410 252 11 1 397 1 380 8.32e-40 159
Msa0502280 MtrunA17_Chr5g0413811 25.485 722 424 26 226 898 1 657 8.79e-40 157
Msa0502280 MtrunA17_Chr3g0113781 26.275 647 409 25 221 834 3 614 8.99e-40 158
Msa0502280 MtrunA17_Chr3g0087731 27.391 617 373 24 204 785 2 578 1.53e-39 158
Msa0502280 MtrunA17_Chr3g0087301 24.784 811 508 32 1 774 1 746 1.55e-39 159
Msa0502280 MtrunA17_Chr2g0309151 28.452 478 300 17 226 684 1 455 2.03e-39 153
Msa0502280 MtrunA17_Chr3g0085111 24.917 903 564 34 29 878 34 875 4.50e-39 157
Msa0502280 MtrunA17_Chr6g0469991 29.899 398 241 14 1 389 1 369 4.61e-39 149
Msa0502280 MtrunA17_Chr5g0414291 27.187 423 260 12 1 403 1 395 5.72e-39 150
Msa0502280 MtrunA17_Chr3g0083721 23.711 873 549 34 66 883 30 840 6.15e-39 156
Msa0502280 MtrunA17_Chr3g0085551 24.842 789 499 31 128 865 7 752 2.81e-38 153
Msa0502280 MtrunA17_Chr3g0091011 23.556 883 566 31 38 878 43 858 3.76e-38 154
Msa0502280 MtrunA17_Chr6g0456121 26.550 516 312 21 168 661 151 621 4.75e-38 154
Msa0502280 MtrunA17_Chr8g0338361 24.641 487 338 13 160 635 21 489 4.77e-38 149
Msa0502280 MtrunA17_Chr3g0085521 23.416 931 600 38 1 878 1 871 9.29e-38 153
Msa0502280 MtrunA17_Chr7g0257551 29.563 389 236 11 111 479 40 410 1.20e-37 146
Msa0502280 MtrunA17_Chr3g0084811 22.778 900 587 32 36 878 194 1042 1.36e-37 152
Msa0502280 MtrunA17_Chr3g0080871 25.132 756 493 26 166 878 154 879 1.98e-37 152
Msa0502280 MtrunA17_Chr6g0456131 24.964 689 442 26 24 684 27 668 2.80e-37 151
Msa0502280 MtrunA17_Chr3g0085091 24.372 915 543 38 38 878 43 882 3.31e-37 151
Msa0502280 MtrunA17_Chr4g0048471 25.136 736 479 24 194 884 48 756 7.57e-37 149
Msa0502280 MtrunA17_Chr3g0086741 23.166 859 534 33 1 786 1 806 1.62e-36 149
Msa0502280 MtrunA17_Chr3g0084361 34.298 242 156 2 671 910 1 241 4.85e-36 137
Msa0502280 MtrunA17_Chr5g0415551 25.111 673 431 21 142 785 16 644 8.92e-36 145
Msa0502280 MtrunA17_Chr1g0189261 69.565 92 27 1 1 92 1 91 1.40e-35 130
Msa0502280 MtrunA17_Chr3g0085161 25.230 761 481 29 162 878 24 740 1.14e-33 140
Msa0502280 MtrunA17_Chr8g0352211 23.547 654 447 19 1 635 1001 1620 1.62e-33 140
Msa0502280 MtrunA17_Chr6g0468401 26.796 362 232 11 1 355 1 336 4.12e-33 131
Msa0502280 MtrunA17_Chr1g0197191 29.429 333 203 11 65 391 22 328 1.09e-32 129
Msa0502280 MtrunA17_Chr4g0048421 23.822 764 479 32 159 868 141 855 1.53e-32 136
Msa0502280 MtrunA17_Chr6g0478721 24.272 721 465 27 194 868 91 776 2.01e-32 135
Msa0502280 MtrunA17_Chr1g0168901 26.408 746 421 28 194 901 171 826 3.57e-32 135
Msa0502280 MtrunA17_Chr8g0355071 30.389 283 170 8 216 489 29 293 9.15e-32 126
Msa0502280 MtrunA17_Chr1g0189311 68.750 80 25 0 200 279 1 80 1.30e-31 118
Msa0502280 MtrunA17_Chr3g0084061 24.539 868 558 33 64 882 67 886 1.67e-31 133
Msa0502280 MtrunA17_Chr3g0085171 23.469 784 493 29 38 776 36 757 3.61e-31 132
Msa0502280 MtrunA17_Chr7g0248411 30.137 292 174 10 108 387 47 320 4.21e-31 125
Msa0502280 MtrunA17_Chr3g0083591 25.442 735 444 36 188 865 155 842 4.66e-31 132
Msa0502280 MtrunA17_Chr5g0417251 26.534 554 348 23 262 786 19 542 6.72e-31 129
Msa0502280 MtrunA17_Chr3g0091971 23.522 761 465 28 160 878 136 821 8.32e-30 127
Msa0502280 MtrunA17_Chr4g0010491 24.893 466 288 15 1 446 1 424 1.60e-29 122
Msa0502280 MtrunA17_Chr3g0101411 74.684 79 19 1 1 79 1 78 4.55e-29 110
Msa0502280 MtrunA17_Chr1g0169941 32.432 259 161 7 257 511 29 277 9.90e-28 115
Msa0502280 MtrunA17_Chr6g0468191 30.901 233 139 7 1 228 1 216 2.60e-26 109
Msa0502280 MtrunA17_Chr5g0416571 25.581 387 215 12 1 371 1 330 3.95e-26 110
Msa0502280 MtrunA17_Chr3g0081201 33.495 206 134 1 706 908 1 206 1.05e-25 106
Msa0502280 MtrunA17_Chr2g0308491 28.148 270 163 6 187 446 10 258 1.06e-25 107
Msa0502280 MtrunA17_Chr3g0082381 26.646 319 191 11 33 336 42 332 1.33e-25 108
Msa0502280 MtrunA17_Chr5g0414171 24.414 512 291 15 1 508 1 420 1.38e-25 110
Msa0502280 MtrunA17_Chr5g0410401 23.691 764 443 30 167 865 12 700 1.84e-25 113
Msa0502280 MtrunA17_Chr3g0083641 24.185 798 482 35 148 878 129 870 3.31e-25 113
Msa0502280 MtrunA17_Chr5g0410481 24.950 501 299 17 256 718 200 661 7.70e-25 111
Msa0502280 MtrunA17_Chr5g0410301 24.147 791 474 30 146 868 121 853 1.38e-24 110
Msa0502280 MtrunA17_Chr2g0299141 27.749 382 233 15 329 684 33 397 1.45e-24 107
Msa0502280 MtrunA17_Chr8g0360991 29.067 375 219 17 190 552 169 508 3.52e-24 109
Msa0502280 MtrunA17_Chr2g0299131 30.901 233 139 5 168 390 2 222 5.66e-24 101
Msa0502280 MtrunA17_Chr5g0415491 29.515 227 145 5 152 373 5 221 7.77e-24 100
Msa0502280 MtrunA17_Chr5g0410261 23.247 770 467 29 171 864 160 881 9.41e-24 108
Msa0502280 MtrunA17_Chr3g0091121 27.500 520 323 26 416 898 19 521 2.23e-23 106
Msa0502280 MtrunA17_Chr5g0410161 23.701 789 448 38 148 866 278 982 7.43e-23 105
Msa0502280 MtrunA17_Chr6g0468111 25.561 579 328 20 118 683 1 489 9.11e-23 103
Msa0502280 MtrunA17_Chr8g0338681 29.954 217 144 4 261 475 30 240 1.05e-22 98.2
Msa0502280 MtrunA17_Chr3g0086071 27.475 495 311 22 417 878 11 490 1.53e-22 103
Msa0502280 MtrunA17_Chr8g0392521 31.771 192 120 5 166 350 131 318 2.14e-22 99.4
Msa0502280 MtrunA17_Chr3g0085701 29.245 318 196 10 166 473 150 448 2.47e-22 103
Msa0502280 MtrunA17_Chr1g0197181 25.581 516 301 18 431 880 2 500 4.08e-22 101
Msa0502280 MtrunA17_Chr2g0313481 25.130 577 359 21 194 738 174 709 5.36e-22 102
Msa0502280 MtrunA17_Chr3g0082371 27.723 404 257 16 381 774 1 379 8.22e-22 100
Msa0502280 MtrunA17_Chr3g0083681 24.471 756 432 32 194 878 182 869 1.08e-21 101
Msa0502280 MtrunA17_Chr8g0338861 24.762 630 398 23 307 880 7 616 1.35e-21 100
Msa0502280 MtrunA17_Chr3g0101161 37.113 194 107 4 721 908 2 186 3.70e-21 92.4
Msa0502280 MtrunA17_Chr5g0443761 27.935 494 290 18 199 661 38 496 5.80e-21 99.4
Msa0502280 MtrunA17_Chr7g0257251 38.509 161 90 4 333 489 10 165 1.21e-20 90.5
Msa0502280 MtrunA17_Chr6g0468141 26.027 292 164 9 108 390 3 251 1.78e-20 92.4
Msa0502280 MtrunA17_Chr1g0153981 25.895 363 223 13 172 520 184 514 8.22e-20 95.1
Msa0502280 MtrunA17_Chr3g0105551 25.479 522 324 20 1 511 1 468 1.04e-19 95.5
Msa0502280 MtrunA17_Chr5g0444291 50.562 89 24 1 285 353 8 96 1.05e-19 85.1
Msa0502280 MtrunA17_Chr3g0108811 25.434 519 313 22 175 661 163 639 1.80e-19 94.7
Msa0502280 MtrunA17_Chr2g0314301 25.514 729 444 30 194 884 172 839 3.63e-19 93.6
Msa0502280 MtrunA17_Chr2g0282981 22.590 363 246 10 34 387 44 380 4.38e-19 91.3
Msa0502280 MtrunA17_Chr1g0160951 25.235 531 323 17 194 705 69 544 5.49e-19 93.2
Msa0502280 MtrunA17_Chr3g0099571 25.813 461 282 17 193 637 173 589 5.68e-19 92.8
Msa0502280 MtrunA17_Chr3g0105571 28.169 355 216 13 170 511 94 422 1.03e-18 91.3
Msa0502280 MtrunA17_Chr1g0189331 46.364 110 54 2 678 783 1 109 1.83e-18 82.0
Msa0502280 MtrunA17_Chr5g0413821 26.360 239 139 8 1 221 1 220 3.47e-18 84.3
Msa0502280 MtrunA17_Chr7g0256881 27.577 388 220 15 170 550 186 519 4.27e-18 90.1
Msa0502280 MtrunA17_Chr7g0221071 25.316 553 328 27 194 715 96 594 4.52e-18 89.0
Msa0502280 MtrunA17_Chr7g0221021 26.642 548 330 26 194 719 207 704 4.66e-18 89.7
Msa0502280 MtrunA17_Chr3g0107181 23.369 659 410 25 29 661 23 612 1.01e-17 88.6
Msa0502280 MtrunA17_Chr3g0100261 28.614 339 189 14 194 513 173 477 1.03e-17 89.0
Msa0502280 MtrunA17_Chr3g0091961 25.858 379 234 19 326 684 3 354 1.34e-17 86.3
Msa0502280 MtrunA17_Chr3g0108821 24.624 532 332 21 194 705 168 650 1.49e-17 88.6
Msa0502280 MtrunA17_Chr7g0255111 25.263 475 286 20 181 637 168 591 2.16e-17 87.8
Msa0502280 MtrunA17_Chr3g0085721 26.190 294 192 9 101 387 79 354 3.30e-17 84.7
Msa0502280 MtrunA17_Chr7g0221131 24.863 547 336 25 194 715 241 737 6.07e-17 85.9
Msa0502280 MtrunA17_Chr3g0107211 22.761 536 342 15 194 705 169 656 8.54e-17 85.9
Msa0502280 MtrunA17_Chr5g0402671 26.190 378 215 17 167 521 159 495 1.67e-16 84.7
Msa0502280 MtrunA17_Chr3g0108791 27.619 315 204 11 200 510 1 295 2.25e-16 82.8
Msa0502280 MtrunA17_Chr3g0099591 23.037 764 449 30 159 878 138 806 2.29e-16 84.3
Msa0502280 MtrunA17_Chr5g0402721 23.312 622 356 25 193 739 168 743 2.50e-16 84.0
Msa0502280 MtrunA17_Chr3g0085431 27.619 315 190 12 373 665 2 300 3.61e-16 82.8
Msa0502280 MtrunA17_Chr6g0470001 28.457 376 229 17 420 774 3 359 6.03e-16 82.4
Msa0502280 MtrunA17_Chr2g0313461 25.339 738 439 34 194 886 174 844 8.13e-16 82.8
Msa0502280 MtrunA17_Chr6g0468201 30.337 267 166 9 421 684 4 253 1.52e-15 81.3
Msa0502280 MtrunA17_Chr1g0189341 50.000 80 38 1 801 880 1 78 1.75e-15 73.6
Msa0502280 MtrunA17_Chr2g0313491 23.561 747 441 29 194 886 174 844 3.05e-15 80.9
Msa0502280 MtrunA17_Chr7g0229751 24.502 502 298 22 194 661 120 574 3.15e-15 80.5
Msa0502280 MtrunA17_Chr2g0299881 28.035 346 203 14 172 511 196 501 3.43e-15 80.9
Msa0502280 MtrunA17_Chr5g0420341 26.049 572 336 26 194 712 209 746 4.71e-15 80.1
Msa0502280 MtrunA17_Chr7g0229721 24.319 514 334 19 170 661 142 622 6.37e-15 79.7
Msa0502280 MtrunA17_Chr5g0402771 23.636 715 419 31 167 843 157 782 6.65e-15 79.3
Msa0502280 MtrunA17_Chr5g0420331 26.207 580 325 26 194 712 209 746 1.14e-14 79.0
Msa0502280 MtrunA17_Chr3g0108211 26.667 315 209 10 200 510 1 297 2.00e-14 76.6
Msa0502280 MtrunA17_Chr2g0313591 25.303 577 355 26 194 738 174 706 2.16e-14 78.2
Msa0502280 MtrunA17_Chr2g0299841 27.479 353 196 17 172 511 233 538 2.39e-14 77.8
Msa0502280 MtrunA17_Chr7g0221171 24.419 516 314 24 194 688 229 689 3.43e-14 77.4
Msa0502280 MtrunA17_Chr3g0096721 24.400 500 302 20 194 661 167 622 4.62e-14 77.0
Msa0502280 MtrunA17_Chr1g0189511 28.053 303 155 13 365 661 10 255 5.41e-14 73.2
Msa0502280 MtrunA17_Chr7g0221061 28.846 260 160 10 194 445 277 519 6.32e-14 76.3
Msa0502280 MtrunA17_Chr6g0470061 28.302 212 134 5 1 209 1 197 8.59e-14 71.2
Msa0502280 MtrunA17_Chr3g0108011 25.397 504 291 25 194 661 204 658 8.83e-14 76.3
Msa0502280 MtrunA17_Chr8g0338981 23.761 585 322 25 172 684 186 718 9.65e-14 75.9
Msa0502280 MtrunA17_Chr5g0414911 24.000 350 225 11 176 513 161 481 1.03e-13 75.9
Msa0502280 MtrunA17_Chr3g0097031 25.294 510 309 22 194 692 117 565 1.07e-13 75.1
Msa0502280 MtrunA17_Chr2g0299791 28.228 333 190 17 186 511 207 497 1.19e-13 75.5
Msa0502280 MtrunA17_Chr2g0313521 24.157 712 439 26 203 886 187 825 1.38e-13 75.1
Msa0502280 MtrunA17_Chr4g0010711 24.829 584 320 25 172 684 696 1231 1.55e-13 75.5
Msa0502280 MtrunA17_Chr8g0374301 22.830 622 350 29 193 739 196 762 1.65e-13 74.7
Msa0502280 MtrunA17_Chr8g0392511 28.531 354 202 16 457 778 5 339 1.82e-13 72.8
Msa0502280 MtrunA17_Chr1g0167981 25.151 497 289 24 195 661 176 619 1.91e-13 75.1
Msa0502280 MtrunA17_Chr3g0091851 23.853 436 266 16 279 707 187 563 2.46e-13 74.7
Msa0502280 MtrunA17_Chr1g0146241 25.867 375 225 17 159 513 145 486 3.16e-13 74.3
Msa0502280 MtrunA17_Chr3g0085421 32.061 131 73 3 194 319 123 242 3.16e-13 70.5
Msa0502280 MtrunA17_Chr1g0153991 25.501 349 224 12 173 513 182 502 3.48e-13 73.9
Msa0502280 MtrunA17_Chr4g0009141 26.488 336 193 15 186 511 718 1009 4.04e-13 73.9
Msa0502280 MtrunA17_Chr7g0221141 24.904 522 307 26 200 692 1 466 4.17e-13 73.6
Msa0502280 MtrunA17_Chr1g0172271 21.994 682 422 32 13 661 16 620 5.81e-13 73.2
Msa0502280 MtrunA17_Chr3g0105621 26.012 346 222 12 175 511 102 422 1.04e-12 71.6
Msa0502280 MtrunA17_Chr4g0009241 27.679 336 189 15 186 511 740 1031 1.26e-12 72.4
Msa0502280 MtrunA17_Chr3g0107931 23.596 534 316 23 194 707 191 652 1.39e-12 72.4
Msa0502280 MtrunA17_Chr6g0475721 24.048 499 291 23 195 661 175 617 1.42e-12 71.6
Msa0502280 MtrunA17_Chr3g0108101 27.372 274 175 9 200 466 1 257 2.13e-12 68.6
Msa0502280 MtrunA17_Chr6g0455221 26.003 573 323 28 199 736 219 725 2.62e-12 71.2
Msa0502280 MtrunA17_Chr7g0257261 25.692 253 155 9 1 235 1 238 3.02e-12 68.2
Msa0502280 MtrunA17_Chr6g0479051 29.885 261 138 13 194 435 189 423 3.02e-12 70.9
Msa0502280 MtrunA17_Chr7g0255401 25.074 339 202 14 195 513 118 424 3.36e-12 70.9
Msa0502280 MtrunA17_Chr6g0478451 22.793 623 362 25 194 802 223 740 3.39e-12 70.9
Msa0502280 MtrunA17_Chr2g0299811 27.089 347 205 18 172 511 39 344 3.50e-12 70.5
Msa0502280 MtrunA17_Chr5g0417081 26.543 324 190 16 194 511 1 282 6.06e-12 68.9
Msa0502280 MtrunA17_Chr7g0223531 26.781 351 201 13 172 511 197 502 6.66e-12 69.7
Msa0502280 MtrunA17_Chr4g0020411 37.313 134 70 5 311 441 27 149 7.82e-12 64.3
Msa0502280 MtrunA17_Chr8g0339031 23.643 571 341 20 172 684 197 730 7.83e-12 69.7
Msa0502280 MtrunA17_Chr4g0041431 29.961 257 147 12 194 442 37 268 7.95e-12 69.3
Msa0502280 MtrunA17_Chr6g0478741 30.916 262 142 14 190 435 206 444 8.55e-12 69.3
Msa0502280 MtrunA17_Chr6g0455131 25.258 582 313 30 186 707 285 804 9.97e-12 69.3
Msa0502280 MtrunA17_Chr4g0005891 25.704 568 295 28 186 691 241 743 1.23e-11 68.9
Msa0502280 MtrunA17_Chr7g0221111 23.596 534 331 26 227 734 19 501 1.23e-11 68.9
Msa0502280 MtrunA17_Chr2g0313351 23.514 740 432 28 203 886 187 848 1.72e-11 68.6
Msa0502280 MtrunA17_Chr2g0313431 25.514 486 288 18 203 661 183 621 1.72e-11 68.2
Msa0502280 MtrunA17_Chr4g0009171 24.869 571 305 27 186 684 924 1442 2.17e-11 68.6
Msa0502280 MtrunA17_Chr4g0009171 28.024 339 184 16 186 511 198 489 4.21e-11 67.4
Msa0502280 MtrunA17_Chr6g0454831 24.957 577 297 27 186 684 201 719 2.56e-11 67.8
Msa0502280 MtrunA17_Chr2g0319921 26.797 306 160 17 169 446 193 462 2.90e-11 67.8
Msa0502280 MtrunA17_Chr3g0105481 26.911 327 207 10 194 511 119 422 3.29e-11 67.8
Msa0502280 MtrunA17_Chr5g0415481 24.891 458 282 20 453 882 6 429 3.43e-11 66.6
Msa0502280 MtrunA17_Chr8g0353001 25.618 445 229 22 194 604 215 591 3.91e-11 67.4
Msa0502280 MtrunA17_Chr8g0339011 26.404 356 195 17 172 511 182 486 4.25e-11 67.4
Msa0502280 MtrunA17_Chr1g0163931 22.561 820 474 43 107 870 103 817 4.68e-11 67.4
Msa0502280 MtrunA17_Chr8g0363851 25.974 385 205 19 171 532 7 334 4.92e-11 67.0
Msa0502280 MtrunA17_Chr6g0454971 24.762 525 304 24 194 686 249 714 5.92e-11 66.6
Msa0502280 MtrunA17_Chr2g0330121 24.650 714 418 34 205 884 44 671 7.06e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0502280 AT3G07040.1 31.395 946 595 19 1 919 1 919 8.44e-127 406
Msa0502280 AT5G43470.3 29.087 942 607 25 1 916 1 907 1.18e-96 325
Msa0502280 AT5G43470.2 29.087 942 607 25 1 916 1 907 1.18e-96 325
Msa0502280 AT5G43470.4 29.087 942 607 25 1 916 1 907 1.18e-96 325
Msa0502280 AT5G43470.1 29.087 942 607 25 1 916 1 907 1.18e-96 325
Msa0502280 AT5G35450.2 28.435 939 606 26 1 916 1 896 6.97e-93 314
Msa0502280 AT5G35450.1 28.435 939 606 26 1 916 1 896 6.97e-93 314
Msa0502280 AT1G53350.1 28.105 950 590 27 1 908 1 899 3.19e-91 310
Msa0502280 AT1G59780.2 27.340 951 576 29 1 908 1 879 3.39e-90 306
Msa0502280 AT1G59780.1 27.340 951 576 29 1 908 6 884 4.02e-90 306
Msa0502280 AT3G46710.1 30.146 889 529 28 1 858 1 828 4.02e-89 303
Msa0502280 AT3G46730.1 31.116 887 510 30 1 853 1 820 1.34e-88 301
Msa0502280 AT3G46530.1 30.127 863 537 27 1 853 1 807 2.85e-88 300
Msa0502280 AT5G48620.6 27.876 965 589 28 1 916 1 907 4.93e-88 301
Msa0502280 AT5G48620.1 27.876 965 589 28 1 916 1 907 4.93e-88 301
Msa0502280 AT5G48620.4 27.876 965 589 28 1 916 1 907 4.93e-88 301
Msa0502280 AT5G48620.2 27.876 965 589 28 1 916 1 907 4.93e-88 301
Msa0502280 AT5G48620.3 27.876 965 589 28 1 916 1 907 4.93e-88 301
Msa0502280 AT5G48620.5 27.876 965 589 28 1 916 1 907 4.93e-88 301
Msa0502280 AT1G58400.3 27.183 916 592 27 1 880 1 877 4.42e-87 298
Msa0502280 AT1G58400.2 27.183 916 592 27 1 880 1 877 4.42e-87 298
Msa0502280 AT1G58400.1 26.776 915 587 24 1 880 1 867 2.34e-85 293
Msa0502280 AT1G50180.1 28.799 941 548 29 1 909 1 851 2.10e-79 276
Msa0502280 AT1G58390.1 26.878 945 608 27 1 908 1 899 5.84e-79 276
Msa0502280 AT1G58390.2 26.878 945 608 27 1 908 1 899 5.84e-79 276
Msa0502280 AT1G59124.2 26.756 1039 584 36 1 908 1 993 5.27e-78 275
Msa0502280 AT1G58807.1 26.756 1039 584 36 1 908 1 993 5.27e-78 275
Msa0502280 AT3G50950.2 25.733 921 541 32 1 867 1 832 8.63e-77 268
Msa0502280 AT3G50950.1 25.733 921 541 32 1 867 1 832 8.63e-77 268
Msa0502280 AT1G59218.1 26.820 1003 565 34 1 871 1 966 1.22e-76 271
Msa0502280 AT1G59218.2 26.820 1003 565 34 1 871 1 966 1.22e-76 271
Msa0502280 AT1G59218.3 26.820 1003 565 34 1 871 1 966 1.22e-76 271
Msa0502280 AT1G58848.1 26.820 1003 565 34 1 871 1 966 1.22e-76 271
Msa0502280 AT1G58848.2 26.820 1003 565 34 1 871 1 966 1.22e-76 271
Msa0502280 AT1G58410.1 25.831 902 615 26 5 884 3 872 3.12e-72 256
Msa0502280 AT1G58410.4 25.831 902 615 26 5 884 3 872 3.12e-72 256
Msa0502280 AT1G58410.2 25.831 902 615 26 5 884 3 872 3.12e-72 256
Msa0502280 AT1G59124.1 26.856 916 545 31 1 858 1 849 1.44e-68 245
Msa0502280 AT1G58807.2 26.856 916 545 31 1 858 1 849 1.44e-68 245
Msa0502280 AT1G58602.2 25.610 902 600 26 1 868 1 865 1.57e-64 237
Msa0502280 AT1G58602.1 25.610 902 600 26 1 868 1 865 1.57e-64 237
Msa0502280 AT1G59620.2 27.356 764 482 24 168 908 24 737 5.62e-63 227
Msa0502280 AT1G10920.1 28.790 719 463 20 136 828 5 700 2.52e-59 216
Msa0502280 AT1G10920.2 28.790 719 463 20 136 828 5 700 2.52e-59 216
Msa0502280 AT1G10920.4 28.790 719 463 20 136 828 5 700 2.52e-59 216
Msa0502280 AT1G58410.3 24.778 900 592 28 5 882 3 839 7.52e-58 214
Msa0502280 AT3G14470.1 26.287 738 461 28 34 736 42 731 1.53e-53 203
Msa0502280 AT3G14470.2 26.287 738 461 28 34 736 42 731 1.53e-53 203
Msa0502280 AT3G14460.1 26.106 678 429 22 34 684 39 671 8.00e-51 195
Msa0502280 AT1G12220.3 25.648 733 477 27 194 897 57 750 1.88e-37 151
Msa0502280 AT1G12220.1 25.648 733 477 27 194 897 178 871 3.02e-37 151
Msa0502280 AT1G12220.2 25.648 733 477 27 194 897 178 871 3.02e-37 151
Msa0502280 AT1G12280.1 24.485 776 510 28 168 913 154 883 1.04e-35 146
Msa0502280 AT4G10780.2 25.585 727 433 28 194 868 175 845 2.31e-35 145
Msa0502280 AT4G10780.1 25.585 727 433 28 194 868 175 845 3.35e-35 145
Msa0502280 AT1G10920.5 26.585 568 331 18 309 828 1 530 2.89e-34 139
Msa0502280 AT1G10920.3 26.585 568 331 18 309 828 1 530 2.89e-34 139
Msa0502280 AT5G63020.1 23.377 770 452 28 184 871 166 879 5.18e-33 138
Msa0502280 AT1G15890.2 31.268 339 202 13 184 513 6 322 7.27e-33 136
Msa0502280 AT1G15890.1 30.769 338 205 12 184 513 166 482 1.79e-32 136
Msa0502280 AT5G43730.4 25.419 716 460 29 182 864 162 836 3.42e-31 132
Msa0502280 AT5G43730.1 25.419 716 460 29 182 864 162 836 3.42e-31 132
Msa0502280 AT5G43730.3 25.419 716 460 29 182 864 162 836 3.42e-31 132
Msa0502280 AT5G43730.2 25.419 716 460 29 182 864 162 836 3.42e-31 132
Msa0502280 AT5G43730.5 25.419 716 460 29 182 864 162 836 3.42e-31 132
Msa0502280 AT1G63350.4 24.691 729 448 27 166 868 144 797 1.20e-30 130
Msa0502280 AT1G12210.3 24.338 793 470 30 166 897 106 829 1.53e-30 130
Msa0502280 AT1G12210.2 24.338 793 470 30 166 897 106 829 1.53e-30 130
Msa0502280 AT1G12210.1 24.338 793 470 30 166 897 148 871 2.40e-30 129
Msa0502280 AT1G51480.1 24.684 713 469 29 184 864 165 841 3.80e-30 129
Msa0502280 AT1G61310.1 25.102 733 440 29 194 862 176 863 8.28e-30 128
Msa0502280 AT5G05400.2 25.417 480 288 21 194 645 8 445 1.49e-29 126
Msa0502280 AT5G05400.3 25.417 480 288 21 194 645 8 445 1.49e-29 126
Msa0502280 AT5G05400.1 25.417 480 288 21 194 645 177 614 4.07e-29 125
Msa0502280 AT1G63350.1 24.659 734 478 28 166 868 144 833 7.77e-29 124
Msa0502280 AT1G63350.3 24.523 734 479 27 166 868 144 833 8.09e-29 124
Msa0502280 AT1G63350.2 24.523 734 479 27 166 868 144 833 8.09e-29 124
Msa0502280 AT5G43740.1 26.056 568 350 22 184 705 163 706 8.10e-29 124
Msa0502280 AT5G43740.2 26.056 568 350 22 184 705 163 706 8.10e-29 124
Msa0502280 AT1G61190.2 28.625 538 321 25 194 714 175 666 4.73e-28 122
Msa0502280 AT1G61190.3 28.625 538 321 25 194 714 175 666 4.73e-28 122
Msa0502280 AT1G61190.1 26.939 735 431 33 194 880 175 851 8.71e-28 121
Msa0502280 AT4G26090.1 24.324 777 450 38 171 882 155 858 1.00e-27 121
Msa0502280 AT5G47250.1 26.066 610 380 25 170 764 156 709 1.29e-27 120
Msa0502280 AT1G12290.4 26.411 443 284 18 194 614 135 557 2.91e-27 119
Msa0502280 AT1G12290.3 26.411 443 284 18 194 614 135 557 2.91e-27 119
Msa0502280 AT1G12290.2 26.411 443 284 18 194 614 135 557 2.91e-27 119
Msa0502280 AT1G12290.1 26.411 443 284 18 194 614 177 599 3.55e-27 119
Msa0502280 AT1G62630.1 25.850 588 364 24 205 770 185 722 4.35e-27 119
Msa0502280 AT1G61190.4 25.139 720 438 32 194 880 175 826 7.47e-27 118
Msa0502280 AT1G63360.2 25.850 735 430 35 205 887 150 821 1.40e-26 117
Msa0502280 AT1G63360.1 25.850 735 430 35 205 887 185 856 1.53e-26 117
Msa0502280 AT1G12280.2 23.187 772 492 28 168 913 116 812 3.14e-26 116
Msa0502280 AT1G61180.1 27.602 442 269 19 194 611 174 588 3.52e-26 116
Msa0502280 AT1G61180.2 27.602 442 269 19 194 611 174 588 3.99e-26 116
Msa0502280 AT1G61300.1 25.472 742 460 25 194 897 63 749 2.66e-25 113
Msa0502280 AT4G27190.1 25.962 520 327 20 195 688 167 654 9.18e-25 112
Msa0502280 AT1G61300.2 25.647 425 274 14 194 611 63 452 9.79e-25 111
Msa0502280 AT4G27220.2 25.954 524 328 23 195 695 145 631 8.80e-23 105
Msa0502280 AT4G27220.1 25.954 524 328 23 195 695 137 623 1.03e-22 105
Msa0502280 AT5G47260.1 23.563 522 312 24 194 692 171 628 8.67e-16 82.8
Msa0502280 AT5G66900.1 22.465 641 370 26 171 739 168 753 5.90e-14 76.6
Msa0502280 AT5G66900.2 22.706 643 366 25 171 739 216 801 6.22e-14 76.6
Msa0502280 AT1G27170.1 24.518 726 414 30 171 810 189 866 6.59e-14 77.0
Msa0502280 AT1G27170.2 24.518 726 414 30 171 810 189 866 7.81e-14 76.6
Msa0502280 AT5G04720.1 25.524 286 166 11 172 448 180 427 2.53e-13 74.7
Msa0502280 AT4G33300.2 26.404 356 207 16 172 513 182 496 4.14e-13 73.9
Msa0502280 AT4G33300.1 26.404 356 207 16 172 513 182 496 4.14e-13 73.9
Msa0502280 AT5G17680.2 24.060 532 309 24 194 688 209 682 2.05e-12 72.0
Msa0502280 AT5G17680.1 24.060 532 309 24 194 688 208 681 2.25e-12 72.0
Msa0502280 AT5G66900.3 24.033 362 227 13 171 517 216 544 1.03e-11 69.3

Find 185 sgRNAs with CRISPR-Local

Find 240 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTGAAGAGCTCTGTATTT+TGG 0.123441 3_4:+44368773 Msa0502280:CDS
TTGGGTCTGGAAGATGAATT+TGG 0.169169 3_4:+44368792 Msa0502280:CDS
AAAGATTGTTCTGGAGTTAA+AGG 0.174440 3_4:-44367148 None:intergenic
ATTTAATTCCAAAACAAAAT+AGG 0.175469 3_4:-44367825 None:intergenic
ACTGTCTTTGATTCAATTAA+AGG 0.182949 3_4:+44368140 Msa0502280:CDS
AAGTCATGTTTGTTGTATTT+TGG 0.216005 3_4:+44367442 Msa0502280:CDS
GCGTCTTGTTTCTTTAAATA+TGG 0.225732 3_4:+44368197 Msa0502280:CDS
ATGAAATTTCCCAAATTCTT+AGG 0.236391 3_4:-44367934 None:intergenic
GCTATACCAATGAGCTCTTT+TGG 0.246092 3_4:-44367220 None:intergenic
GTTGATGTTCATAAGGAAAA+TGG 0.259478 3_4:+44368282 Msa0502280:CDS
TTTAACTCCAGAACAATCTT+TGG 0.262589 3_4:+44367150 Msa0502280:CDS
AGGTCATTTACTTTCTGTTT+TGG 0.276501 3_4:+44369302 Msa0502280:three_prime_UTR
GATTTGACTTCATAATCTTC+TGG 0.279040 3_4:-44367472 None:intergenic
TGAAGATCTAACATCCATTC+TGG 0.282119 3_4:-44368456 None:intergenic
CCAGGGAAGGAGTCAAAATA+TGG 0.290511 3_4:+44366324 Msa0502280:CDS
AATAAAAGAAGACTCTTTAC+AGG 0.299789 3_4:-44367107 None:intergenic
GTATCCTCGCTTAAATTTGA+TGG 0.307822 3_4:+44367613 Msa0502280:CDS
CTTTGGCAACTCAAGATATA+TGG 0.313689 3_4:-44368073 None:intergenic
TGGGGATTTCCATTCCTATC+TGG 0.316459 3_4:-44367855 None:intergenic
CTAAAGATTTGCACACAAAA+AGG 0.320561 3_4:+44366878 Msa0502280:CDS
TTTAATTCCAAAACAAAATA+GGG 0.320918 3_4:-44367824 None:intergenic
TGGGTCTGGAAGATGAATTT+GGG 0.327850 3_4:+44368793 Msa0502280:CDS
CCAACTACTTCCAGTGTTAA+GGG 0.335085 3_4:+44366178 Msa0502280:CDS
ATTGTGAGACCTTATTGTTC+AGG 0.336205 3_4:+44369282 Msa0502280:three_prime_UTR
GTGAACCTTCATACTTTCTA+AGG 0.336583 3_4:-44368575 None:intergenic
CACTCGAGGGTCGTGCCATT+TGG 0.344281 3_4:-44366606 None:intergenic
ACCAACTACTTCCAGTGTTA+AGG 0.346055 3_4:+44366177 Msa0502280:CDS
CTAAGCTTGCTAATCTCCTT+TGG 0.357553 3_4:-44368090 None:intergenic
AACAACTCCAAAGATTGTTC+TGG 0.362715 3_4:-44367157 None:intergenic
CCTCAGCTTCCTCGACATAA+AGG 0.364514 3_4:-44366634 None:intergenic
ATTCAATTAAAGGATGGTAT+TGG 0.366172 3_4:+44368150 Msa0502280:CDS
AACTAAAGACACAACCATTT+CGG 0.369095 3_4:-44366150 None:intergenic
AAGACAGATGCACATTTGAT+TGG 0.370834 3_4:+44367370 Msa0502280:CDS
GGAGGAAAAGGGAAAGACTA+TGG 0.373290 3_4:+44367537 Msa0502280:CDS
TGGAGCATGGCAATGGATCT+TGG 0.379668 3_4:-44368006 None:intergenic
TGCAAGCATATTAGTGATGA+TGG 0.379871 3_4:+44367709 Msa0502280:CDS
TTGTCGTATTTGATGATGTT+TGG 0.380392 3_4:+44366987 Msa0502280:CDS
AGTAAATGACCTGAACAATA+AGG 0.385715 3_4:-44369291 None:intergenic
TTTGGAGTTGTTCAATAAGA+AGG 0.390993 3_4:+44367168 Msa0502280:CDS
GAACCAAGGTCTCTAGGTTC+TGG 0.395077 3_4:-44368026 None:intergenic
ACACTTGTTGAGCTTGTACT+TGG 0.399780 3_4:+44368551 Msa0502280:CDS
GACGTTGGTTGATGTTCATA+AGG 0.402232 3_4:+44368275 Msa0502280:CDS
TAGGAAAGCTGAAGCTGATA+AGG 0.404498 3_4:+44368247 Msa0502280:CDS
AAATATGGGTGAAGCAACTT+AGG 0.404547 3_4:+44366339 Msa0502280:CDS
CGCAGAGATTAAAGATGAAC+TGG 0.407152 3_4:+44366238 Msa0502280:CDS
TTTGACAGCAAGGATATCAT+TGG 0.412455 3_4:+44366782 Msa0502280:CDS
GGAGCATGGCAATGGATCTT+GGG 0.412762 3_4:-44368005 None:intergenic
TTCAATAACCTGTACTTTGT+GGG 0.415167 3_4:-44367874 None:intergenic
AGCTTGACCAATGGCCGAAA+TGG 0.418014 3_4:+44366136 None:intergenic
GCAGAGGTAATCAAAGCATT+AGG 0.418618 3_4:+44368228 Msa0502280:CDS
GACACTTTGATTGTCGTGTA+TGG 0.430001 3_4:+44366804 Msa0502280:CDS
TCCTGAGGGTATTTCTCAAA+TGG 0.432236 3_4:+44366910 Msa0502280:CDS
AATGGATCTTTATCTGAATA+CGG 0.432719 3_4:-44368507 None:intergenic
ATTGATTGATTGGATGGTAC+AGG 0.434087 3_4:+44366685 Msa0502280:CDS
GTTCTACTGAGGATTGGAAT+TGG 0.436273 3_4:+44368823 Msa0502280:CDS
CTTCAATAACCTGTACTTTG+TGG 0.437314 3_4:-44367875 None:intergenic
GTGGGTATATTCTTCAGATT+AGG 0.438674 3_4:-44368729 None:intergenic
GACACAACCATTTCGGCCAT+TGG 0.440620 3_4:-44366143 None:intergenic
CTCGAGGTTGTTGTGCTACC+AGG 0.443980 3_4:-44366406 None:intergenic
CTTCAAGCTTCTCCAAGTGT+TGG 0.445112 3_4:-44368758 None:intergenic
AGGGTTTGTGAAGGAGGAAA+AGG 0.445462 3_4:+44367525 Msa0502280:CDS
ATTAAATACATATTCCAGAT+AGG 0.454082 3_4:+44367841 Msa0502280:CDS
CTTGTTTCTTTAAATATGGA+TGG 0.454503 3_4:+44368201 Msa0502280:CDS
AGCTGAAGGGTTTGTGAAGG+AGG 0.457944 3_4:+44367519 Msa0502280:CDS
CCCTTAACACTGGAAGTAGT+TGG 0.458147 3_4:-44366178 None:intergenic
AGACAGATGCACATTTGATT+GGG 0.459700 3_4:+44367371 Msa0502280:CDS
TTCAAAATCTTACTGTGTTG+AGG 0.462177 3_4:+44368475 Msa0502280:CDS
AAACAAGACGCAGAGTTTGT+AGG 0.463576 3_4:-44368185 None:intergenic
CGTCAATGCTTGTTATTGAC+AGG 0.468974 3_4:-44367762 None:intergenic
GTCGAGGAAGCTGAGGTTGT+GGG 0.469516 3_4:+44366641 Msa0502280:CDS
AAATTTGATGGCAAAGCTAA+AGG 0.471594 3_4:+44367625 Msa0502280:CDS
CTCAGCTTCCTCGACATAAA+GGG 0.474183 3_4:-44366633 None:intergenic
TGTGGTGTCTGTGGTAGGAA+TGG 0.478105 3_4:+44366724 Msa0502280:CDS
AGAAAGCTAAGACATCTTAT+CGG 0.480177 3_4:+44368111 Msa0502280:CDS
AGGAAAGCTGAAGCTGATAA+GGG 0.482975 3_4:+44368248 Msa0502280:CDS
ACAGAAAGAAGTGAAAGATA+TGG 0.484511 3_4:+44366530 Msa0502280:CDS
TGTCGAGGAAGCTGAGGTTG+TGG 0.485322 3_4:+44366640 Msa0502280:CDS
GTGTCTGTGGTAGGAATGGG+AGG 0.490440 3_4:+44366728 Msa0502280:CDS
AACAAGACGCAGAGTTTGTA+GGG 0.490938 3_4:-44368184 None:intergenic
GAGCTGAAGGAGACAACACC+AGG 0.494315 3_4:+44366306 Msa0502280:CDS
GGGTTTGTGAAGGAGGAAAA+GGG 0.495805 3_4:+44367526 Msa0502280:CDS
GTGGTGTCTGTGGTAGGAAT+GGG 0.496592 3_4:+44366725 Msa0502280:CDS
GAAATTACTTGCAGAATTCG+AGG 0.499489 3_4:+44366960 Msa0502280:CDS
GATCCTTTAGTGGAATAGTT+CGG 0.502067 3_4:+44367737 Msa0502280:CDS
CACAAAGTACAGGTTATTGA+AGG 0.503528 3_4:+44367876 Msa0502280:CDS
GCACAACAACCTCGAGATCA+TGG 0.504294 3_4:+44366413 Msa0502280:CDS
CCGCTAGCAATTGTTGCCAT+CGG 0.508345 3_4:+44367274 Msa0502280:CDS
AATATGGGTGAAGCAACTTA+GGG 0.508933 3_4:+44366340 Msa0502280:CDS
CATTGATGAATATTTGATCC+TGG 0.509741 3_4:+44366388 Msa0502280:CDS
CTCTTAGAACCAAGGTCTCT+AGG 0.510879 3_4:-44368032 None:intergenic
GACTATGGAAGAAGTAGCAG+AGG 0.512062 3_4:+44367552 Msa0502280:CDS
GATGCTGATAAAAGAGCAGC+AGG 0.512910 3_4:+44366284 Msa0502280:CDS
AGCGCAGTTCTACTGAGGAT+TGG 0.516972 3_4:+44368817 Msa0502280:CDS
GTGGTAGGAATGGGAGGGCA+AGG 0.522675 3_4:+44366734 Msa0502280:CDS
CTCCAAGTGTTGGATTCCAG+TGG 0.523301 3_4:-44368748 None:intergenic
GGGTATTTCTCAAATGGATC+GGG 0.527460 3_4:+44366916 Msa0502280:CDS
GATGGACAAAGATCCTTTAG+TGG 0.528867 3_4:+44367727 Msa0502280:CDS
TGATGCTTAAATACTTCAAG+TGG 0.532865 3_4:-44367957 None:intergenic
AAAAGAGCAGCAGGAGCTGA+AGG 0.534231 3_4:+44366293 Msa0502280:CDS
GTACTGATAAATCTCATGTT+CGG 0.536490 3_4:+44367800 Msa0502280:CDS
TGATTGGATGGTACAGGGAA+GGG 0.536722 3_4:+44366691 Msa0502280:CDS
GCATTCACAATTGATTGTGA+TGG 0.540956 3_4:+44367190 Msa0502280:CDS
AGAGTTGATTCATAGAAGCC+TGG 0.542183 3_4:+44367585 Msa0502280:CDS
TTGATTGGATGGTACAGGGA+AGG 0.542980 3_4:+44366690 Msa0502280:CDS
TGGAAATCCCCACAAAGTAC+AGG 0.545624 3_4:+44367866 Msa0502280:CDS
GGTCTCTAGGTTCTGGAGCA+TGG 0.547235 3_4:-44368019 None:intergenic
GCGCCGAACTATTCCACTAA+AGG 0.547428 3_4:-44367740 None:intergenic
TAGGTTCTGGAGCATGGCAA+TGG 0.551038 3_4:-44368013 None:intergenic
AGGGTATTTCTCAAATGGAT+CGG 0.551687 3_4:+44366915 Msa0502280:CDS
GAGGAAGCAGGAATGCCAAA+TGG 0.552792 3_4:+44366591 Msa0502280:CDS
CAGTGTTAAGGGAAGAAGCC+AGG 0.555710 3_4:+44366189 Msa0502280:CDS
TCTTTGATTCAATTAAAGGA+TGG 0.556502 3_4:+44368144 Msa0502280:CDS
TGAGGATTGGAATTGGATCA+TGG 0.556648 3_4:+44368830 Msa0502280:CDS
GACTTCAAGTTCAAGTGCGA+TGG 0.560463 3_4:+44369121 Msa0502280:CDS
TCCAAGTGTTGGATTCCAGT+GGG 0.561313 3_4:-44368747 None:intergenic
TTCCTTGTTCAAAAGAACGT+TGG 0.562414 3_4:-44366556 None:intergenic
ATACATATTCCAGATAGGAA+TGG 0.564066 3_4:+44367846 Msa0502280:CDS
TCAATAACCTGTACTTTGTG+GGG 0.565072 3_4:-44367873 None:intergenic
TGTTGTCCAAAAGAGCTCAT+TGG 0.566334 3_4:+44367214 Msa0502280:CDS
GAAGGAGACAACACCAGGGA+AGG 0.568185 3_4:+44366311 Msa0502280:CDS
CTAGCAATTGTTGCCATCGG+TGG 0.568840 3_4:+44367277 Msa0502280:CDS
TCTCAATCATATAATGCTGA+AGG 0.571435 3_4:+44366836 Msa0502280:CDS
CAAGCAATTCTAGAGGAAGC+AGG 0.573985 3_4:+44366579 Msa0502280:CDS
ATTCGACAATGGATAGCTGA+AGG 0.574762 3_4:+44367505 Msa0502280:CDS
ACATAAAGGGCAGCCACTCG+AGG 0.575413 3_4:-44366620 None:intergenic
GCTCCAGAACCTAGAGACCT+TGG 0.578057 3_4:+44368023 Msa0502280:CDS
TTGATTGATTGGATGGTACA+GGG 0.579742 3_4:+44366686 Msa0502280:CDS
CCTTTATGTCGAGGAAGCTG+AGG 0.582766 3_4:+44366634 Msa0502280:CDS
CATTCACAATTGATTGTGAT+GGG 0.582800 3_4:+44367191 Msa0502280:CDS
TTGGACCTTAGAAAGTATGA+AGG 0.583118 3_4:+44368570 Msa0502280:CDS
ACCCACTGGAATCCAACACT+TGG 0.584151 3_4:+44368746 Msa0502280:CDS
AAACATGACTTGAGATAGCA+AGG 0.584565 3_4:-44367430 None:intergenic
CTAGAGACCTTGGTTCTAAG+AGG 0.585656 3_4:+44368033 Msa0502280:CDS
AAATCTTACTGTGTTGAGGT+TGG 0.587326 3_4:+44368479 Msa0502280:CDS
GGTTAAAGGAGTTTCCAGAA+TGG 0.587463 3_4:+44368442 Msa0502280:CDS
CAGGGAAGGAGTCAAAATAT+GGG 0.589468 3_4:+44366325 Msa0502280:CDS
TATGATCCTTGAAAAGAATG+AGG 0.590719 3_4:+44367675 Msa0502280:CDS
TCCATTTGAGAAATACCCTC+AGG 0.591956 3_4:-44366911 None:intergenic
AACAAGGAACAAGAATGTTG+TGG 0.593606 3_4:+44367081 Msa0502280:CDS
AAACTTCTTAGTGATTGCAA+TGG 0.594486 3_4:-44368525 None:intergenic
CGTACTGTGGTGTCTGTGGT+AGG 0.594614 3_4:+44366719 Msa0502280:CDS
GTGAACGCCTCTCAACAGCC+TGG 0.600191 3_4:-44366207 None:intergenic
AATCTGAAGAATATACCCAC+TGG 0.600274 3_4:+44368732 Msa0502280:CDS
CTGGCTTCTTCCCTTAACAC+TGG 0.601946 3_4:-44366188 None:intergenic
GCTGTTGAGAGGCGTTCACA+AGG 0.608080 3_4:+44366211 Msa0502280:CDS
CAAAGAGAGTGATTCGACAA+TGG 0.612640 3_4:+44367494 Msa0502280:CDS
AGAGAAATTATCATCGACAA+AGG 0.612799 3_4:+44368666 Msa0502280:CDS
AAATATGGATGGAGCAGCAG+AGG 0.613866 3_4:+44368212 Msa0502280:CDS
GTGTTGCATTTCATTGAGTG+AGG 0.615926 3_4:-44368319 None:intergenic
GAAGAAGCCAGGCTGTTGAG+AGG 0.616968 3_4:+44366200 Msa0502280:CDS
CATAAAGGGCAGCCACTCGA+GGG 0.617973 3_4:-44366619 None:intergenic
ATTTGAGAAATACCCTCAGG+AGG 0.618154 3_4:-44366908 None:intergenic
GGCAATTCAGATTCTCCACA+TGG 0.618598 3_4:+44369142 Msa0502280:CDS
GGGTCTGGAAGATGAATTTG+GGG 0.620791 3_4:+44368794 Msa0502280:CDS
TATAGATAAAAGTCCACCGA+TGG 0.623609 3_4:-44367290 None:intergenic
AGTGGCTGCCCTTTATGTCG+AGG 0.626601 3_4:+44366625 Msa0502280:CDS
GATAGCTGAAGGGTTTGTGA+AGG 0.629650 3_4:+44367516 Msa0502280:CDS
TTTGCCATCAAATTTAAGCG+AGG 0.630222 3_4:-44367617 None:intergenic
CATATATCTTGAGTTGCCAA+AGG 0.630838 3_4:+44368074 Msa0502280:CDS
GCTATACATCCATGATCTCG+AGG 0.630988 3_4:-44366422 None:intergenic
TGGGGAGCGCAGTTCTACTG+AGG 0.632265 3_4:+44368812 Msa0502280:CDS
TAAGCGAGGATACTTGAACC+AGG 0.634851 3_4:-44367603 None:intergenic
CAGAAGCTATTCGACGACGA+GGG 0.635402 3_4:-44366472 None:intergenic
TTCGACAATGGATAGCTGAA+GGG 0.639953 3_4:+44367506 Msa0502280:CDS
CAAATGGCACGACCCTCGAG+TGG 0.641097 3_4:+44366607 Msa0502280:CDS
AGAGCGTACTGTGGTGTCTG+TGG 0.641742 3_4:+44366715 Msa0502280:CDS
GTATATTCTTCAGATTAGGA+AGG 0.645865 3_4:-44368725 None:intergenic
TGGAGGCTTTCAGAAACTAA+CGG 0.649653 3_4:+44368614 Msa0502280:CDS
ACTATGGAAGAAGTAGCAGA+GGG 0.651437 3_4:+44367553 Msa0502280:CDS
AAGCATTCAAGCATTCCTGA+AGG 0.652772 3_4:+44366262 Msa0502280:CDS
CAAGGAACAAGCAATTCTAG+AGG 0.653762 3_4:+44366572 Msa0502280:CDS
ATTTGTGTAATAAGAAACGA+GGG 0.653769 3_4:+44369350 Msa0502280:three_prime_UTR
ATACGGACCTCTTAGAACCA+AGG 0.653915 3_4:-44368040 None:intergenic
AATTTGTGTAATAAGAAACG+AGG 0.660550 3_4:+44369349 Msa0502280:three_prime_UTR
GCTGATAAGGGATTTGACGT+TGG 0.663404 3_4:+44368260 Msa0502280:CDS
TTACTGTGTTGAGGTTGGTG+TGG 0.665073 3_4:+44368484 Msa0502280:CDS
AAAGGAGTGAAACCTCCTGA+GGG 0.665884 3_4:+44366896 Msa0502280:CDS
AATCAAATTGAACTCAACGA+AGG 0.678849 3_4:-44368379 None:intergenic
TCAGAAGCTATTCGACGACG+AGG 0.687408 3_4:-44366473 None:intergenic
AAAAGGAGTGAAACCTCCTG+AGG 0.692495 3_4:+44366895 Msa0502280:CDS
CCGATGGCAACAATTGCTAG+CGG 0.711591 3_4:-44367274 None:intergenic
GGGAAGGGAAGAGCGTACTG+TGG 0.718370 3_4:+44366706 Msa0502280:CDS
AGCTGAAGGAGACAACACCA+GGG 0.727839 3_4:+44366307 Msa0502280:CDS
GTAGGATATTTATCACAACA+AGG 0.739738 3_4:+44367065 Msa0502280:CDS
TGTCTGTGGTAGGAATGGGA+GGG 0.744293 3_4:+44366729 Msa0502280:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAATTCCAAAACAAAATA+GGG - chr3_4:44367827-44367846 None:intergenic 15.0%
!! ATTTAATTCCAAAACAAAAT+AGG - chr3_4:44367828-44367847 None:intergenic 15.0%
!! AAAAATATTCCTAAGAATTT+GGG + chr3_4:44367925-44367944 Msa0502280:CDS 15.0%
!! ATTAAAAATTCTCATACATA+TGG - chr3_4:44368992-44369011 None:intergenic 15.0%
!! GAAATTGTTAAAAAATGCAA+CGG + chr3_4:44367247-44367266 Msa0502280:CDS 20.0%
!!! ATTGGGATAAAAGAAATTTT+AGG + chr3_4:44367388-44367407 Msa0502280:CDS 20.0%
!! ATTAAATACATATTCCAGAT+AGG + chr3_4:44367841-44367860 Msa0502280:CDS 20.0%
!! GAAAAATATTCCTAAGAATT+TGG + chr3_4:44367924-44367943 Msa0502280:CDS 20.0%
!!! AAATGAATAGTTTTCAAAGA+AGG - chr3_4:44368699-44368718 None:intergenic 20.0%
!!! TTTAGAATAAATCTGTACAA+GGG - chr3_4:44368865-44368884 None:intergenic 20.0%
!! AGTACGAAAAAATAAGTTAT+AGG - chr3_4:44368950-44368969 None:intergenic 20.0%
!! CAATCAATCAATCTTTTTCT+TGG - chr3_4:44366677-44366696 None:intergenic 25.0%
! CAAGAAAAAGATTGATTGAT+TGG + chr3_4:44366675-44366694 Msa0502280:CDS 25.0%
! AAAAAGATTGATTGATTGGA+TGG + chr3_4:44366679-44366698 Msa0502280:CDS 25.0%
!!! ATGTTTGGAATGAACTTTTT+TGG + chr3_4:44367002-44367021 Msa0502280:CDS 25.0%
! TTGATTGTAAAAATGGAAGT+AGG + chr3_4:44367047-44367066 Msa0502280:CDS 25.0%
! AATAAAAGAAGACTCTTTAC+AGG - chr3_4:44367110-44367129 None:intergenic 25.0%
!! TAAAGAGTCTTCTTTTATTG+AGG + chr3_4:44367111-44367130 Msa0502280:CDS 25.0%
!!! AAGTCATGTTTGTTGTATTT+TGG + chr3_4:44367442-44367461 Msa0502280:CDS 25.0%
!!! GTTCTTGATTTTGAAGATTT+TGG + chr3_4:44367898-44367917 Msa0502280:CDS 25.0%
! ATGAAATTTCCCAAATTCTT+AGG - chr3_4:44367937-44367956 None:intergenic 25.0%
! ACTGTCTTTGATTCAATTAA+AGG + chr3_4:44368140-44368159 Msa0502280:CDS 25.0%
! TCTTTGATTCAATTAAAGGA+TGG + chr3_4:44368144-44368163 Msa0502280:CDS 25.0%
! ATTCAATTAAAGGATGGTAT+TGG + chr3_4:44368150-44368169 Msa0502280:CDS 25.0%
!! CTTGTTTCTTTAAATATGGA+TGG + chr3_4:44368201-44368220 Msa0502280:CDS 25.0%
! TTCAAAAACTTTCGCTAATA+GGG + chr3_4:44368418-44368437 Msa0502280:CDS 25.0%
! AATGGATCTTTATCTGAATA+CGG - chr3_4:44368510-44368529 None:intergenic 25.0%
! TTAGAATAAATCTGTACAAG+GGG - chr3_4:44368864-44368883 None:intergenic 25.0%
!!! CTTTAGAATAAATCTGTACA+AGG - chr3_4:44368866-44368885 None:intergenic 25.0%
! GCAGAGAAATTAAAAAATCA+AGG + chr3_4:44368889-44368908 Msa0502280:intron 25.0%
! AATTTGTGTAATAAGAAACG+AGG + chr3_4:44369349-44369368 Msa0502280:three_prime_UTR 25.0%
! ATTTGTGTAATAAGAAACGA+GGG + chr3_4:44369350-44369369 Msa0502280:three_prime_UTR 25.0%
AACTAAAGACACAACCATTT+CGG - chr3_4:44366153-44366172 None:intergenic 30.0%
CATTGATGAATATTTGATCC+TGG + chr3_4:44366388-44366407 Msa0502280:CDS 30.0%
ACAGAAAGAAGTGAAAGATA+TGG + chr3_4:44366530-44366549 Msa0502280:CDS 30.0%
TCTCAATCATATAATGCTGA+AGG + chr3_4:44366836-44366855 Msa0502280:CDS 30.0%
CTAAAGATTTGCACACAAAA+AGG + chr3_4:44366878-44366897 Msa0502280:CDS 30.0%
!! TTGTCGTATTTGATGATGTT+TGG + chr3_4:44366987-44367006 Msa0502280:CDS 30.0%
GCTGCAATTGATTGTAAAAA+TGG + chr3_4:44367040-44367059 Msa0502280:CDS 30.0%
GTAGGATATTTATCACAACA+AGG + chr3_4:44367065-44367084 Msa0502280:CDS 30.0%
!! AAAGATTGTTCTGGAGTTAA+AGG - chr3_4:44367151-44367170 None:intergenic 30.0%
TTTAACTCCAGAACAATCTT+TGG + chr3_4:44367150-44367169 Msa0502280:CDS 30.0%
! TTTGGAGTTGTTCAATAAGA+AGG + chr3_4:44367168-44367187 Msa0502280:CDS 30.0%
CATTCACAATTGATTGTGAT+GGG + chr3_4:44367191-44367210 Msa0502280:CDS 30.0%
! GATTTGACTTCATAATCTTC+TGG - chr3_4:44367475-44367494 None:intergenic 30.0%
! AAATTTGATGGCAAAGCTAA+AGG + chr3_4:44367625-44367644 Msa0502280:CDS 30.0%
TATGATCCTTGAAAAGAATG+AGG + chr3_4:44367675-44367694 Msa0502280:CDS 30.0%
! TCAAATCCTCATTCTTTTCA+AGG - chr3_4:44367684-44367703 None:intergenic 30.0%
! GTACTGATAAATCTCATGTT+CGG + chr3_4:44367800-44367819 Msa0502280:CDS 30.0%
ATACATATTCCAGATAGGAA+TGG + chr3_4:44367846-44367865 Msa0502280:CDS 30.0%
TTCAATAACCTGTACTTTGT+GGG - chr3_4:44367877-44367896 None:intergenic 30.0%
TGATGCTTAAATACTTCAAG+TGG - chr3_4:44367960-44367979 None:intergenic 30.0%
TATATGGACCTCCAAAAATA+CGG - chr3_4:44368060-44368079 None:intergenic 30.0%
AGAAAGCTAAGACATCTTAT+CGG + chr3_4:44368111-44368130 Msa0502280:CDS 30.0%
!! GCGTCTTGTTTCTTTAAATA+TGG + chr3_4:44368197-44368216 Msa0502280:CDS 30.0%
GTTGATGTTCATAAGGAAAA+TGG + chr3_4:44368282-44368301 Msa0502280:CDS 30.0%
AATCAAATTGAACTCAACGA+AGG - chr3_4:44368382-44368401 None:intergenic 30.0%
!!! GAAAGTTTTTGAAGCATAGT+TGG - chr3_4:44368411-44368430 None:intergenic 30.0%
CTTCAAAAACTTTCGCTAAT+AGG + chr3_4:44368417-44368436 Msa0502280:CDS 30.0%
TCAAAAACTTTCGCTAATAG+GGG + chr3_4:44368419-44368438 Msa0502280:CDS 30.0%
TTCAAAATCTTACTGTGTTG+AGG + chr3_4:44368475-44368494 Msa0502280:CDS 30.0%
AAACTTCTTAGTGATTGCAA+TGG - chr3_4:44368528-44368547 None:intergenic 30.0%
!! TCACATTTGCATTTTCAAGA+TGG + chr3_4:44368594-44368613 Msa0502280:CDS 30.0%
AGAGAAATTATCATCGACAA+AGG + chr3_4:44368666-44368685 Msa0502280:CDS 30.0%
GTATATTCTTCAGATTAGGA+AGG - chr3_4:44368728-44368747 None:intergenic 30.0%
GAGTTAGAAATATTTACTCC+AGG + chr3_4:44368911-44368930 Msa0502280:intron 30.0%
TATAGAAAACTATCCCTTTG+TGG - chr3_4:44369072-44369091 None:intergenic 30.0%
!! ATAACCCTTTTGTTGTGATT+TGG + chr3_4:44369089-44369108 Msa0502280:intron 30.0%
AGTAAATGACCTGAACAATA+AGG - chr3_4:44369294-44369313 None:intergenic 30.0%
! AGGTCATTTACTTTCTGTTT+TGG + chr3_4:44369302-44369321 Msa0502280:three_prime_UTR 30.0%
AAATATGGGTGAAGCAACTT+AGG + chr3_4:44366339-44366358 Msa0502280:CDS 35.0%
AATATGGGTGAAGCAACTTA+GGG + chr3_4:44366340-44366359 Msa0502280:CDS 35.0%
! TTCCAACGTTCTTTTGAACA+AGG + chr3_4:44366554-44366573 Msa0502280:CDS 35.0%
TTCCTTGTTCAAAAGAACGT+TGG - chr3_4:44366559-44366578 None:intergenic 35.0%
ATTGATTGATTGGATGGTAC+AGG + chr3_4:44366685-44366704 Msa0502280:CDS 35.0%
TTGATTGATTGGATGGTACA+GGG + chr3_4:44366686-44366705 Msa0502280:CDS 35.0%
! CTTGCTGTCAAAAACTTTCT+TGG - chr3_4:44366774-44366793 None:intergenic 35.0%
! CAAGAAAGTTTTTGACAGCA+AGG + chr3_4:44366772-44366791 Msa0502280:CDS 35.0%
TTTGACAGCAAGGATATCAT+TGG + chr3_4:44366782-44366801 Msa0502280:CDS 35.0%
! AGGGTATTTCTCAAATGGAT+CGG + chr3_4:44366915-44366934 Msa0502280:CDS 35.0%
GAAATTACTTGCAGAATTCG+AGG + chr3_4:44366960-44366979 Msa0502280:CDS 35.0%
AACAAGGAACAAGAATGTTG+TGG + chr3_4:44367081-44367100 Msa0502280:CDS 35.0%
AACAACTCCAAAGATTGTTC+TGG - chr3_4:44367160-44367179 None:intergenic 35.0%
GCATTCACAATTGATTGTGA+TGG + chr3_4:44367190-44367209 Msa0502280:CDS 35.0%
TATAGATAAAAGTCCACCGA+TGG - chr3_4:44367293-44367312 None:intergenic 35.0%
GAGAGAAAAATGTGTTTGAG+TGG + chr3_4:44367314-44367333 Msa0502280:CDS 35.0%
AAGACAGATGCACATTTGAT+TGG + chr3_4:44367370-44367389 Msa0502280:CDS 35.0%
AGACAGATGCACATTTGATT+GGG + chr3_4:44367371-44367390 Msa0502280:CDS 35.0%
AAACATGACTTGAGATAGCA+AGG - chr3_4:44367433-44367452 None:intergenic 35.0%
GTATCCTCGCTTAAATTTGA+TGG + chr3_4:44367613-44367632 Msa0502280:CDS 35.0%
TTTGCCATCAAATTTAAGCG+AGG - chr3_4:44367620-44367639 None:intergenic 35.0%
TGCAAGCATATTAGTGATGA+TGG + chr3_4:44367709-44367728 Msa0502280:CDS 35.0%
GATCCTTTAGTGGAATAGTT+CGG + chr3_4:44367737-44367756 Msa0502280:CDS 35.0%
!!! AAGCATTGACGATGTTTTCA+GGG + chr3_4:44367774-44367793 Msa0502280:CDS 35.0%
TCAATAACCTGTACTTTGTG+GGG - chr3_4:44367876-44367895 None:intergenic 35.0%
CTTCAATAACCTGTACTTTG+TGG - chr3_4:44367878-44367897 None:intergenic 35.0%
CACAAAGTACAGGTTATTGA+AGG + chr3_4:44367876-44367895 Msa0502280:CDS 35.0%
!! TTCTAAGAGGTCCGTATTTT+TGG + chr3_4:44368046-44368065 Msa0502280:CDS 35.0%
CTTTGGCAACTCAAGATATA+TGG - chr3_4:44368076-44368095 None:intergenic 35.0%
! CATATATCTTGAGTTGCCAA+AGG + chr3_4:44368074-44368093 Msa0502280:CDS 35.0%
!!! AGTTTTTGAAGCATAGTTGG+TGG - chr3_4:44368408-44368427 None:intergenic 35.0%
CAAAAACTTTCGCTAATAGG+GGG + chr3_4:44368420-44368439 Msa0502280:CDS 35.0%
AAAAACTTTCGCTAATAGGG+GGG + chr3_4:44368421-44368440 Msa0502280:CDS 35.0%
TGAAGATCTAACATCCATTC+TGG - chr3_4:44368459-44368478 None:intergenic 35.0%
AAATCTTACTGTGTTGAGGT+TGG + chr3_4:44368479-44368498 Msa0502280:CDS 35.0%
! TTGGACCTTAGAAAGTATGA+AGG + chr3_4:44368570-44368589 Msa0502280:CDS 35.0%
GTGAACCTTCATACTTTCTA+AGG - chr3_4:44368578-44368597 None:intergenic 35.0%
!! CATTTGCATTTTCAAGATGG+AGG + chr3_4:44368597-44368616 Msa0502280:CDS 35.0%
GTGGGTATATTCTTCAGATT+AGG - chr3_4:44368732-44368751 None:intergenic 35.0%
AATCTGAAGAATATACCCAC+TGG + chr3_4:44368732-44368751 Msa0502280:CDS 35.0%
! CTTGAAGAGCTCTGTATTTT+GGG + chr3_4:44368774-44368793 Msa0502280:CDS 35.0%
CCTACCAAATCACAACAAAA+GGG - chr3_4:44369096-44369115 None:intergenic 35.0%
ACCTACCAAATCACAACAAA+AGG - chr3_4:44369097-44369116 None:intergenic 35.0%
CAAAAATCTCAAAGTCCATG+TGG - chr3_4:44369160-44369179 None:intergenic 35.0%
ATTGTGAGACCTTATTGTTC+AGG + chr3_4:44369282-44369301 Msa0502280:three_prime_UTR 35.0%
ACCAACTACTTCCAGTGTTA+AGG + chr3_4:44366177-44366196 Msa0502280:CDS 40.0%
CCAACTACTTCCAGTGTTAA+GGG + chr3_4:44366178-44366197 Msa0502280:CDS 40.0%
CGCAGAGATTAAAGATGAAC+TGG + chr3_4:44366238-44366257 Msa0502280:CDS 40.0%
AAGCATTCAAGCATTCCTGA+AGG + chr3_4:44366262-44366281 Msa0502280:CDS 40.0%
! CTCTTTTATCAGCATCCTTC+AGG - chr3_4:44366280-44366299 None:intergenic 40.0%
CAGGGAAGGAGTCAAAATAT+GGG + chr3_4:44366325-44366344 Msa0502280:CDS 40.0%
CAAGGAACAAGCAATTCTAG+AGG + chr3_4:44366572-44366591 Msa0502280:CDS 40.0%
GACACTTTGATTGTCGTGTA+TGG + chr3_4:44366804-44366823 Msa0502280:CDS 40.0%
ATTTGAGAAATACCCTCAGG+AGG - chr3_4:44366911-44366930 None:intergenic 40.0%
!! TCCTGAGGGTATTTCTCAAA+TGG + chr3_4:44366910-44366929 Msa0502280:CDS 40.0%
TCCATTTGAGAAATACCCTC+AGG - chr3_4:44366914-44366933 None:intergenic 40.0%
GGGTATTTCTCAAATGGATC+GGG + chr3_4:44366916-44366935 Msa0502280:CDS 40.0%
TGTTGTCCAAAAGAGCTCAT+TGG + chr3_4:44367214-44367233 Msa0502280:CDS 40.0%
! GCTATACCAATGAGCTCTTT+TGG - chr3_4:44367223-44367242 None:intergenic 40.0%
CAAAGAGAGTGATTCGACAA+TGG + chr3_4:44367494-44367513 Msa0502280:CDS 40.0%
ATTCGACAATGGATAGCTGA+AGG + chr3_4:44367505-44367524 Msa0502280:CDS 40.0%
TTCGACAATGGATAGCTGAA+GGG + chr3_4:44367506-44367525 Msa0502280:CDS 40.0%
ACTATGGAAGAAGTAGCAGA+GGG + chr3_4:44367553-44367572 Msa0502280:CDS 40.0%
! AGAGTTGATTCATAGAAGCC+TGG + chr3_4:44367585-44367604 Msa0502280:CDS 40.0%
GATGGACAAAGATCCTTTAG+TGG + chr3_4:44367727-44367746 Msa0502280:CDS 40.0%
!! CGTCAATGCTTGTTATTGAC+AGG - chr3_4:44367765-44367784 None:intergenic 40.0%
!!! CAAGCATTGACGATGTTTTC+AGG + chr3_4:44367773-44367792 Msa0502280:CDS 40.0%
!! GTTCGGTCCCTATTTTGTTT+TGG + chr3_4:44367817-44367836 Msa0502280:CDS 40.0%
!!! TAAGAGGTCCGTATTTTTGG+AGG + chr3_4:44368049-44368068 Msa0502280:CDS 40.0%
!! CTAAGCTTGCTAATCTCCTT+TGG - chr3_4:44368093-44368112 None:intergenic 40.0%
AACAAGACGCAGAGTTTGTA+GGG - chr3_4:44368187-44368206 None:intergenic 40.0%
AAACAAGACGCAGAGTTTGT+AGG - chr3_4:44368188-44368207 None:intergenic 40.0%
! GCAGAGGTAATCAAAGCATT+AGG + chr3_4:44368228-44368247 Msa0502280:CDS 40.0%
TAGGAAAGCTGAAGCTGATA+AGG + chr3_4:44368247-44368266 Msa0502280:CDS 40.0%
AGGAAAGCTGAAGCTGATAA+GGG + chr3_4:44368248-44368267 Msa0502280:CDS 40.0%
! GACGTTGGTTGATGTTCATA+AGG + chr3_4:44368275-44368294 Msa0502280:CDS 40.0%
GTGTTGCATTTCATTGAGTG+AGG - chr3_4:44368322-44368341 None:intergenic 40.0%
GGTTAAAGGAGTTTCCAGAA+TGG + chr3_4:44368442-44368461 Msa0502280:CDS 40.0%
! ACACTTGTTGAGCTTGTACT+TGG + chr3_4:44368551-44368570 Msa0502280:CDS 40.0%
TGGAGGCTTTCAGAAACTAA+CGG + chr3_4:44368614-44368633 Msa0502280:CDS 40.0%
! GCTTGAAGAGCTCTGTATTT+TGG + chr3_4:44368773-44368792 Msa0502280:CDS 40.0%
TTGGGTCTGGAAGATGAATT+TGG + chr3_4:44368792-44368811 Msa0502280:CDS 40.0%
TGGGTCTGGAAGATGAATTT+GGG + chr3_4:44368793-44368812 Msa0502280:CDS 40.0%
GTTCTACTGAGGATTGGAAT+TGG + chr3_4:44368823-44368842 Msa0502280:CDS 40.0%
TGAGGATTGGAATTGGATCA+TGG + chr3_4:44368830-44368849 Msa0502280:CDS 40.0%
! ATAGGAAGAAAAAGCACACC+TGG - chr3_4:44368932-44368951 None:intergenic 40.0%
TAACTCAGCATCGCCAATTA+TGG + chr3_4:44369044-44369063 Msa0502280:intron 40.0%
GCCAATTATGGATCCACAAA+GGG + chr3_4:44369056-44369075 Msa0502280:intron 40.0%
TCCCTTTGTGGATCCATAAT+TGG - chr3_4:44369060-44369079 None:intergenic 40.0%
!!! CCCTTTTGTTGTGATTTGGT+AGG + chr3_4:44369093-44369112 Msa0502280:intron 40.0%
!! TGTTGTGATTTGGTAGGTGA+TGG + chr3_4:44369099-44369118 Msa0502280:intron 40.0%
CCCTTAACACTGGAAGTAGT+TGG - chr3_4:44366181-44366200 None:intergenic 45.0%
GATGCTGATAAAAGAGCAGC+AGG + chr3_4:44366284-44366303 Msa0502280:CDS 45.0%
!!! CCATATTTTGACTCCTTCCC+TGG - chr3_4:44366327-44366346 None:intergenic 45.0%
CCAGGGAAGGAGTCAAAATA+TGG + chr3_4:44366324-44366343 Msa0502280:CDS 45.0%
GCTATACATCCATGATCTCG+AGG - chr3_4:44366425-44366444 None:intergenic 45.0%
! CAAGCAATTCTAGAGGAAGC+AGG + chr3_4:44366579-44366598 Msa0502280:CDS 45.0%
CTCAGCTTCCTCGACATAAA+GGG - chr3_4:44366636-44366655 None:intergenic 45.0%
TTGATTGGATGGTACAGGGA+AGG + chr3_4:44366690-44366709 Msa0502280:CDS 45.0%
TGATTGGATGGTACAGGGAA+GGG + chr3_4:44366691-44366710 Msa0502280:CDS 45.0%
AAAAGGAGTGAAACCTCCTG+AGG + chr3_4:44366895-44366914 Msa0502280:CDS 45.0%
AAAGGAGTGAAACCTCCTGA+GGG + chr3_4:44366896-44366915 Msa0502280:CDS 45.0%
GATAGCTGAAGGGTTTGTGA+AGG + chr3_4:44367516-44367535 Msa0502280:CDS 45.0%
AGGGTTTGTGAAGGAGGAAA+AGG + chr3_4:44367525-44367544 Msa0502280:CDS 45.0%
GGGTTTGTGAAGGAGGAAAA+GGG + chr3_4:44367526-44367545 Msa0502280:CDS 45.0%
GGAGGAAAAGGGAAAGACTA+TGG + chr3_4:44367537-44367556 Msa0502280:CDS 45.0%
GACTATGGAAGAAGTAGCAG+AGG + chr3_4:44367552-44367571 Msa0502280:CDS 45.0%
TAAGCGAGGATACTTGAACC+AGG - chr3_4:44367606-44367625 None:intergenic 45.0%
TGGGGATTTCCATTCCTATC+TGG - chr3_4:44367858-44367877 None:intergenic 45.0%
TGGAAATCCCCACAAAGTAC+AGG + chr3_4:44367866-44367885 Msa0502280:CDS 45.0%
CTCTTAGAACCAAGGTCTCT+AGG - chr3_4:44368035-44368054 None:intergenic 45.0%
!! CTAGAGACCTTGGTTCTAAG+AGG + chr3_4:44368033-44368052 Msa0502280:CDS 45.0%
ATACGGACCTCTTAGAACCA+AGG - chr3_4:44368043-44368062 None:intergenic 45.0%
AAATATGGATGGAGCAGCAG+AGG + chr3_4:44368212-44368231 Msa0502280:CDS 45.0%
GCTGATAAGGGATTTGACGT+TGG + chr3_4:44368260-44368279 Msa0502280:CDS 45.0%
TTCGCTAATAGGGGGGTTAA+AGG + chr3_4:44368428-44368447 Msa0502280:CDS 45.0%
!! TTACTGTGTTGAGGTTGGTG+TGG + chr3_4:44368484-44368503 Msa0502280:CDS 45.0%
!! TCCAAGTGTTGGATTCCAGT+GGG - chr3_4:44368750-44368769 None:intergenic 45.0%
CTTCAAGCTTCTCCAAGTGT+TGG - chr3_4:44368761-44368780 None:intergenic 45.0%
!! AGAGCTCTGTATTTTGGGTC+TGG + chr3_4:44368779-44368798 Msa0502280:CDS 45.0%
GGGTCTGGAAGATGAATTTG+GGG + chr3_4:44368794-44368813 Msa0502280:CDS 45.0%
CGCCAATTATGGATCCACAA+AGG + chr3_4:44369055-44369074 Msa0502280:intron 45.0%
! GACTTCAAGTTCAAGTGCGA+TGG + chr3_4:44369121-44369140 Msa0502280:CDS 45.0%
GGCAATTCAGATTCTCCACA+TGG + chr3_4:44369142-44369161 Msa0502280:CDS 45.0%
CTGGCTTCTTCCCTTAACAC+TGG - chr3_4:44366191-44366210 None:intergenic 50.0%
CAGTGTTAAGGGAAGAAGCC+AGG + chr3_4:44366189-44366208 Msa0502280:CDS 50.0%
AAAAGAGCAGCAGGAGCTGA+AGG + chr3_4:44366293-44366312 Msa0502280:CDS 50.0%
AGCTGAAGGAGACAACACCA+GGG + chr3_4:44366307-44366326 Msa0502280:CDS 50.0%
GCACAACAACCTCGAGATCA+TGG + chr3_4:44366413-44366432 Msa0502280:CDS 50.0%
CAGAAGCTATTCGACGACGA+GGG - chr3_4:44366475-44366494 None:intergenic 50.0%
TCAGAAGCTATTCGACGACG+AGG - chr3_4:44366476-44366495 None:intergenic 50.0%
GAGGAAGCAGGAATGCCAAA+TGG + chr3_4:44366591-44366610 Msa0502280:CDS 50.0%
CCTCAGCTTCCTCGACATAA+AGG - chr3_4:44366637-44366656 None:intergenic 50.0%
CCTTTATGTCGAGGAAGCTG+AGG + chr3_4:44366634-44366653 Msa0502280:CDS 50.0%
TGTGGTGTCTGTGGTAGGAA+TGG + chr3_4:44366724-44366743 Msa0502280:CDS 50.0%
GTGGTGTCTGTGGTAGGAAT+GGG + chr3_4:44366725-44366744 Msa0502280:CDS 50.0%
TGTCTGTGGTAGGAATGGGA+GGG + chr3_4:44366729-44366748 Msa0502280:CDS 50.0%
CCGATGGCAACAATTGCTAG+CGG - chr3_4:44367277-44367296 None:intergenic 50.0%
CCGCTAGCAATTGTTGCCAT+CGG + chr3_4:44367274-44367293 Msa0502280:CDS 50.0%
CTAGCAATTGTTGCCATCGG+TGG + chr3_4:44367277-44367296 Msa0502280:CDS 50.0%
AGCTGAAGGGTTTGTGAAGG+AGG + chr3_4:44367519-44367538 Msa0502280:CDS 50.0%
GCGCCGAACTATTCCACTAA+AGG - chr3_4:44367743-44367762 None:intergenic 50.0%
GGAGCATGGCAATGGATCTT+GGG - chr3_4:44368008-44368027 None:intergenic 50.0%
TGGAGCATGGCAATGGATCT+TGG - chr3_4:44368009-44368028 None:intergenic 50.0%
!! TAGGTTCTGGAGCATGGCAA+TGG - chr3_4:44368016-44368035 None:intergenic 50.0%
GAACCAAGGTCTCTAGGTTC+TGG - chr3_4:44368029-44368048 None:intergenic 50.0%
ACCCACTGGAATCCAACACT+TGG + chr3_4:44368746-44368765 Msa0502280:CDS 50.0%
!! CTCCAAGTGTTGGATTCCAG+TGG - chr3_4:44368751-44368770 None:intergenic 50.0%
AGCGCAGTTCTACTGAGGAT+TGG + chr3_4:44368817-44368836 Msa0502280:CDS 50.0%
GAAGAAGCCAGGCTGTTGAG+AGG + chr3_4:44366200-44366219 Msa0502280:CDS 55.0%
!! GCTGTTGAGAGGCGTTCACA+AGG + chr3_4:44366211-44366230 Msa0502280:CDS 55.0%
GAGCTGAAGGAGACAACACC+AGG + chr3_4:44366306-44366325 Msa0502280:CDS 55.0%
GAAGGAGACAACACCAGGGA+AGG + chr3_4:44366311-44366330 Msa0502280:CDS 55.0%
CTCGAGGTTGTTGTGCTACC+AGG - chr3_4:44366409-44366428 None:intergenic 55.0%
CATAAAGGGCAGCCACTCGA+GGG - chr3_4:44366622-44366641 None:intergenic 55.0%
ACATAAAGGGCAGCCACTCG+AGG - chr3_4:44366623-44366642 None:intergenic 55.0%
AGTGGCTGCCCTTTATGTCG+AGG + chr3_4:44366625-44366644 Msa0502280:CDS 55.0%
TGTCGAGGAAGCTGAGGTTG+TGG + chr3_4:44366640-44366659 Msa0502280:CDS 55.0%
GTCGAGGAAGCTGAGGTTGT+GGG + chr3_4:44366641-44366660 Msa0502280:CDS 55.0%
AGAGCGTACTGTGGTGTCTG+TGG + chr3_4:44366715-44366734 Msa0502280:CDS 55.0%
CGTACTGTGGTGTCTGTGGT+AGG + chr3_4:44366719-44366738 Msa0502280:CDS 55.0%
GTGTCTGTGGTAGGAATGGG+AGG + chr3_4:44366728-44366747 Msa0502280:CDS 55.0%
!! GGTCTCTAGGTTCTGGAGCA+TGG - chr3_4:44368022-44368041 None:intergenic 55.0%
GCTCCAGAACCTAGAGACCT+TGG + chr3_4:44368023-44368042 Msa0502280:CDS 55.0%
GTGAACGCCTCTCAACAGCC+TGG - chr3_4:44366210-44366229 None:intergenic 60.0%
! CACTCGAGGGTCGTGCCATT+TGG - chr3_4:44366609-44366628 None:intergenic 60.0%
CAAATGGCACGACCCTCGAG+TGG + chr3_4:44366607-44366626 Msa0502280:CDS 60.0%
! GGGAAGGGAAGAGCGTACTG+TGG + chr3_4:44366706-44366725 Msa0502280:CDS 60.0%
GTGGTAGGAATGGGAGGGCA+AGG + chr3_4:44366734-44366753 Msa0502280:CDS 60.0%
! TGGGGAGCGCAGTTCTACTG+AGG + chr3_4:44368812-44368831 Msa0502280:CDS 60.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 44366146 44369404 44366146 ID=Msa0502280;Name=Msa0502280
chr3_4 mRNA 44366146 44369404 44366146 ID=Msa0502280-mRNA-1;Parent=Msa0502280;Name=Msa0502280-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0.5|1|1|1|2|233|925
chr3_4 exon 44366146 44368866 44366146 ID=Msa0502280-mRNA-1:exon:9448;Parent=Msa0502280-mRNA-1
chr3_4 exon 44369115 44369404 44369115 ID=Msa0502280-mRNA-1:exon:9449;Parent=Msa0502280-mRNA-1
chr3_4 CDS 44366146 44368866 44366146 ID=Msa0502280-mRNA-1:cds;Parent=Msa0502280-mRNA-1
chr3_4 CDS 44369115 44369171 44369115 ID=Msa0502280-mRNA-1:cds;Parent=Msa0502280-mRNA-1
chr3_4 three_prime_UTR 44369172 44369404 44369172 ID=Msa0502280-mRNA-1:three_prime_utr;Parent=Msa0502280-mRNA-1
Gene Sequence

>Msa0502280

ATGGCCGAAATGGTTGTGTCTTTAGTTATTGACCAACTACTTCCAGTGTTAAGGGAAGAAGCCAGGCTGTTGAGAGGCGTTCACAAGGAGTTCGCAGAGATTAAAGATGAACTGGAAAGCATTCAAGCATTCCTGAAGGATGCTGATAAAAGAGCAGCAGGAGCTGAAGGAGACAACACCAGGGAAGGAGTCAAAATATGGGTGAAGCAACTTAGGGAAGCAGCTTTTCGCATAGAAGATATCATTGATGAATATTTGATCCTGGTAGCACAACAACCTCGAGATCATGGATGTATAGCTTTACTTCATAAGCTCAAAACTATGATCCCTCGTCGTCGAATAGCTTCTGAGATTCAAGATGTTAAGTCATCTGTTCGTGAGATCACAGAAAGAAGTGAAAGATATGGCTTCCAACGTTCTTTTGAACAAGGAACAAGCAATTCTAGAGGAAGCAGGAATGCCAAATGGCACGACCCTCGAGTGGCTGCCCTTTATGTCGAGGAAGCTGAGGTTGTGGGATTTGAAGTGCCAAGAAAAAGATTGATTGATTGGATGGTACAGGGAAGGGAAGAGCGTACTGTGGTGTCTGTGGTAGGAATGGGAGGGCAAGGAAAAACAACTCTAGCCAAGAAAGTTTTTGACAGCAAGGATATCATTGGACACTTTGATTGTCGTGTATGGATTACAGTGTCTCAATCATATAATGCTGAAGGATTGTTGAGAGACATGTTGCTAAAGATTTGCACACAAAAAGGAGTGAAACCTCCTGAGGGTATTTCTCAAATGGATCGGGAGTCATTGACTATTGAAGTGAGAAATTACTTGCAGAATTCGAGGTACATTGTCGTATTTGATGATGTTTGGAATGAACTTTTTTGGTATGATATTAAATCTGCTGCAATTGATTGTAAAAATGGAAGTAGGATATTTATCACAACAAGGAACAAGAATGTTGTGGATTCCTGTAAAGAGTCTTCTTTTATTGAGGTGCATGAACTGCAACCTTTAACTCCAGAACAATCTTTGGAGTTGTTCAATAAGAAGGCATTCACAATTGATTGTGATGGGTGTTGTCCAAAAGAGCTCATTGGTATAGCTAATGAAATTGTTAAAAAATGCAACGGTTTACCGCTAGCAATTGTTGCCATCGGTGGACTTTTATCTATAAGAGAGAAAAATGTGTTTGAGTGGCATAGATTTAGAGAAAATCTAAATTTAGAGCTAAAGACAGATGCACATTTGATTGGGATAAAAGAAATTTTAGGTTTAAGTTATGATGATTTGCCTTGCTATCTCAAGTCATGTTTGTTGTATTTTGGAGTATATCCAGAAGATTATGAAGTCAAATCAAAGAGAGTGATTCGACAATGGATAGCTGAAGGGTTTGTGAAGGAGGAAAAGGGAAAGACTATGGAAGAAGTAGCAGAGGGATATCTAACAGAGTTGATTCATAGAAGCCTGGTTCAAGTATCCTCGCTTAAATTTGATGGCAAAGCTAAAGGTTGTCGTGTTCATGATCTAATACGTGATATGATCCTTGAAAAGAATGAGGATTTGAATTTTTGCAAGCATATTAGTGATGATGGACAAAGATCCTTTAGTGGAATAGTTCGGCGCCTGTCAATAACAAGCATTGACGATGTTTTCAGGGCGTGTACTGATAAATCTCATGTTCGGTCCCTATTTTGTTTTGGAATTAAATACATATTCCAGATAGGAATGGAAATCCCCACAAAGTACAGGTTATTGAAGGTTCTTGATTTTGAAGATTTTGGTATGAAAAATATTCCTAAGAATTTGGGAAATTTCATCCACTTGAAGTATTTAAGCATCATGATTTCAGATGATAAAGTTAAAGTCCCAAGATCCATTGCCATGCTCCAGAACCTAGAGACCTTGGTTCTAAGAGGTCCGTATTTTTGGAGGTCCATATATCTTGAGTTGCCAAAGGAGATTAGCAAGCTTAGAAAGCTAAGACATCTTATCGGCACTGTACTGTCTTTGATTCAATTAAAGGATGGTATTGGAGAGATGAAGTCCCTACAAACTCTGCGTCTTGTTTCTTTAAATATGGATGGAGCAGCAGAGGTAATCAAAGCATTAGGAAAGCTGAAGCTGATAAGGGATTTGACGTTGGTTGATGTTCATAAGGAAAATGGAAGCATTTTATCTTCCTCACTCAATGAAATGCAACACTTGCAGAAACTAAGTGTTAAAACTTTTCAATTTGATACCTTCGTTGAGTTCAATTTGATTTCACCACCAACTATGCTTCAAAAACTTTCGCTAATAGGGGGGTTAAAGGAGTTTCCAGAATGGATGTTAGATCTTCAAAATCTTACTGTGTTGAGGTTGGTGTGGCCGTATTCAGATAAAGATCCATTGCAATCACTAAGAAGTTTGCAACACTTGTTGAGCTTGTACTTGGACCTTAGAAAGTATGAAGGTTCACATTTGCATTTTCAAGATGGAGGCTTTCAGAAACTAACGGAACTGAGAGTTAATCATTCATCTAAATTGAGAGAAATTATCATCGACAAAGGATCAATGCCTTCTTTGAAAACTATTCATTTATTATACCTTCCTAATCTGAAGAATATACCCACTGGAATCCAACACTTGGAGAAGCTTGAAGAGCTCTGTATTTTGGGTCTGGAAGATGAATTTGGGGAGCGCAGTTCTACTGAGGATTGGAATTGGATCATGGAGCATGTGCCCCTTGTGATGGACTTCAAGTTCAAGTGCGATGGCAATTCAGATTCTCCACATGGACTTTGA
Protein sequence

>Msa0502280

MAEMVVSLVIDQLLPVLREEARLLRGVHKEFAEIKDELESIQAFLKDADKRAAGAEGDNTREGVKIWVKQLREAAFRIEDIIDEYLILVAQQPRDHGCIALLHKLKTMIPRRRIASEIQDVKSSVREITERSERYGFQRSFEQGTSNSRGSRNAKWHDPRVAALYVEEAEVVGFEVPRKRLIDWMVQGREERTVVSVVGMGGQGKTTLAKKVFDSKDIIGHFDCRVWITVSQSYNAEGLLRDMLLKICTQKGVKPPEGISQMDRESLTIEVRNYLQNSRYIVVFDDVWNELFWYDIKSAAIDCKNGSRIFITTRNKNVVDSCKESSFIEVHELQPLTPEQSLELFNKKAFTIDCDGCCPKELIGIANEIVKKCNGLPLAIVAIGGLLSIREKNVFEWHRFRENLNLELKTDAHLIGIKEILGLSYDDLPCYLKSCLLYFGVYPEDYEVKSKRVIRQWIAEGFVKEEKGKTMEEVAEGYLTELIHRSLVQVSSLKFDGKAKGCRVHDLIRDMILEKNEDLNFCKHISDDGQRSFSGIVRRLSITSIDDVFRACTDKSHVRSLFCFGIKYIFQIGMEIPTKYRLLKVLDFEDFGMKNIPKNLGNFIHLKYLSIMISDDKVKVPRSIAMLQNLETLVLRGPYFWRSIYLELPKEISKLRKLRHLIGTVLSLIQLKDGIGEMKSLQTLRLVSLNMDGAAEVIKALGKLKLIRDLTLVDVHKENGSILSSSLNEMQHLQKLSVKTFQFDTFVEFNLISPPTMLQKLSLIGGLKEFPEWMLDLQNLTVLRLVWPYSDKDPLQSLRSLQHLLSLYLDLRKYEGSHLHFQDGGFQKLTELRVNHSSKLREIIIDKGSMPSLKTIHLLYLPNLKNIPTGIQHLEKLEELCILGLEDEFGERSSTEDWNWIMEHVPLVMDFKFKCDGNSDSPHGL*