AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0388960

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0388960 MtrunA17_Chr8g0341541 91.770 486 32 3 1 480 1 484 0.0 892
Msa0388960 MtrunA17_Chr8g0341541 94.554 202 7 1 1092 1289 436 637 2.83e-110 361
Msa0388960 MtrunA17_Chr3g0077671 77.679 224 30 3 759 982 1 204 8.34e-97 312
Msa0388960 MtrunA17_Chr7g0249681 68.142 226 42 2 533 731 276 498 1.69e-81 294
Msa0388960 MtrunA17_Chr1g0191001 77.564 156 19 1 835 974 11 166 1.32e-75 247
Msa0388960 MtrunA17_Chr4g0069501 62.805 164 45 1 827 974 20 183 7.67e-63 212
Msa0388960 MtrunA17_Chr2g0302351 62.805 164 45 1 827 974 19 182 8.26e-63 211
Msa0388960 MtrunA17_Chr1g0190991 62.667 150 46 1 834 973 24 173 6.26e-58 197
Msa0388960 MtrunA17_Chr1g0190971 65.306 147 40 2 836 971 13 159 1.21e-55 190
Msa0388960 MtrunA17_Chr5g0421231 65.323 124 34 1 732 846 403 526 1.11e-39 160
Msa0388960 MtrunA17_Chr8g0341571 62.745 102 16 2 1 102 1 80 3.25e-30 115
Msa0388960 MtrunA17_Chr1g0154541 69.737 76 23 0 117 192 19 94 1.35e-29 113
Msa0388960 MtrunA17_Chr8g0341561 68.478 92 11 2 152 225 1 92 6.69e-29 111
Msa0388960 MtrunA17_Chr1g0154551 74.648 71 16 1 1 71 1 69 5.12e-28 108
Msa0388960 MtrunA17_Chr4g0030281 79.167 72 15 0 568 639 1 72 1.75e-27 120
Msa0388960 MtrunA17_Chr6g0461461 31.111 225 152 1 218 442 16 237 7.16e-27 115
Msa0388960 MtrunA17_Chr5g0399821 28.511 235 165 1 208 442 6 237 7.69e-26 112
Msa0388960 MtrunA17_Chr7g0253311 30.222 225 154 1 218 442 16 237 3.93e-25 109
Msa0388960 MtrunA17_Chr4g0055521 27.848 237 168 1 206 442 4 237 6.96e-25 108
Msa0388960 MtrunA17_Chr1g0190981 74.194 62 10 1 835 896 18 73 2.06e-23 95.9
Msa0388960 MtrunA17_Chr8g0392231 54.651 86 34 2 770 854 395 476 2.30e-17 87.4
Msa0388960 MtrunA17_Chr7g0226861 29.752 121 75 2 440 560 82 192 4.68e-11 67.4
Msa0388960 MtrunA17_Chr1g0165151 39.130 69 42 0 442 510 44 112 7.74e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0388960 AT1G51720.1 74.486 486 116 3 1 480 1 484 0.0 751
Msa0388960 AT1G51720.1 76.190 189 45 0 1101 1289 449 637 2.89e-85 292
Msa0388960 AT1G51720.3 74.486 486 116 3 1 480 1 484 0.0 751
Msa0388960 AT1G51720.3 76.190 189 45 0 1101 1289 449 637 2.89e-85 292
Msa0388960 AT1G51720.2 74.486 486 116 3 1 480 1 484 0.0 749
Msa0388960 AT1G51720.2 77.451 102 23 0 1101 1202 449 550 7.80e-49 184
Msa0388960 AT1G51720.4 79.111 450 88 1 1 444 1 450 0.0 746
Msa0388960 AT5G28050.1 63.924 158 41 1 833 974 25 182 4.91e-60 204
Msa0388960 AT5G28050.2 63.924 158 41 1 833 974 44 201 7.15e-60 204
Msa0388960 AT5G28050.3 63.924 158 41 1 833 974 130 287 9.86e-60 207
Msa0388960 AT3G05300.1 53.982 113 33 2 878 974 1 110 2.66e-30 116
Msa0388960 AT5G07440.3 30.667 225 153 1 218 442 16 237 8.82e-27 112
Msa0388960 AT5G07440.2 30.667 225 153 1 218 442 16 237 3.85e-26 113
Msa0388960 AT5G07440.1 30.667 225 153 1 218 442 16 237 3.85e-26 113
Msa0388960 AT3G03910.2 30.222 225 154 1 218 442 16 237 7.21e-25 108
Msa0388960 AT5G18170.1 30.222 225 154 1 218 442 16 237 9.96e-25 108
Msa0388960 AT3G03910.1 30.222 225 154 1 218 442 16 237 1.49e-24 108
Msa0388960 AT1G68720.1 32.432 148 89 4 825 965 1093 1236 1.09e-12 73.6

Find 301 sgRNAs with CRISPR-Local

Find 28 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAAAAGCTGCAACTGATTT+TGG 0.133027 3_1:-93504711 Msa0388960:CDS
TGCTCTGTCTGCAGGGAATT+TGG 0.169315 3_1:-93514814 Msa0388960:CDS
TGTTGCTCTTTGCAAAATAA+TGG 0.190049 3_1:-93509113 Msa0388960:CDS
ACAGGAGTCTCTTTAATAAT+TGG 0.190067 3_1:+93508651 None:intergenic
GAAGAGATTGATTTAGAAAT+TGG 0.192598 3_1:-93515090 Msa0388960:CDS
ATCAGATTCTAGGGGATATT+TGG 0.211286 3_1:-93506531 Msa0388960:intron
TGAACAGATTAACTCTTTAA+TGG 0.212160 3_1:-93508613 Msa0388960:CDS
GCTTTGTCTCCTTACAAATT+AGG 0.215159 3_1:-93512408 Msa0388960:CDS
AAACTTAAGAGATTGGTTTA+TGG 0.219029 3_1:-93508084 Msa0388960:CDS
GATGATTGTTGTGAAATATT+TGG 0.232696 3_1:-93504018 Msa0388960:three_prime_UTR
CCTGCAATGGCTGCTGGTGC+TGG 0.241262 3_1:-93506028 Msa0388960:CDS
GTATGATTTGTTATGCTCTT+AGG 0.249969 3_1:-93507918 Msa0388960:CDS
ATCTTAACCTGCTTGCTTTC+CGG 0.250108 3_1:+93509488 None:intergenic
TACAAGGAAATATGCTTTCT+TGG 0.260904 3_1:+93504168 None:intergenic
CTGCTCAAAGCCAAGGAATT+TGG 0.261198 3_1:+93513317 None:intergenic
TGAAGCATTAATCAGATTCT+AGG 0.262736 3_1:-93506541 Msa0388960:intron
GGTGATCGTGTGATCTTTAT+TGG 0.263341 3_1:+93508932 None:intergenic
TTCTTGAAGCGACACTAAAA+AGG 0.266131 3_1:-93513682 Msa0388960:CDS
GATAAGCCTGTTTATGTAAA+AGG 0.274142 3_1:-93514652 Msa0388960:intron
GGACTTTGAATCTAAATTAC+AGG 0.276151 3_1:-93505079 Msa0388960:intron
ACAGGTATTTGAGAAGAAAA+AGG 0.276176 3_1:-93507977 Msa0388960:CDS
TCACAGGGCCAAGAATATTT+TGG 0.280102 3_1:-93511080 Msa0388960:CDS
TCTTAACCTGCTTGCTTTCC+GGG 0.281944 3_1:+93509489 None:intergenic
GCTCTTCCCATTTCAGTATC+AGG 0.282241 3_1:-93510357 Msa0388960:intron
GGCAGTTGGATTTGATAGTT+TGG 0.285416 3_1:-93508040 Msa0388960:CDS
ATAAAGAACTCAAAGGATTA+AGG 0.294116 3_1:-93510725 Msa0388960:intron
TTGTTTCATAACTTCAGTTT+GGG 0.296506 3_1:-93507785 Msa0388960:CDS
AGGAGACAAAGCATTCTTTA+AGG 0.296981 3_1:+93512419 None:intergenic
ATCAACCCACTTGCACATTC+TGG 0.297050 3_1:+93508903 None:intergenic
TGCCCTTGCAACTTCTGCTT+TGG 0.303673 3_1:+93508059 None:intergenic
TTTGTTTCATAACTTCAGTT+TGG 0.307585 3_1:-93507786 Msa0388960:CDS
CATATTACCTGATACTGAAA+TGG 0.309981 3_1:+93510350 None:intergenic
GGCAATGGGCAATACATTCT+TGG 0.318445 3_1:-93507763 Msa0388960:CDS
GCATTCCACAAGCTGGTTAA+AGG 0.319539 3_1:-93507643 Msa0388960:CDS
GTACAATATTGTCAAGAAAA+AGG 0.321606 3_1:-93504080 Msa0388960:three_prime_UTR
TCAGTATCTTTAATTATAAC+AGG 0.322423 3_1:+93508633 None:intergenic
GTTGCTCTTTGCAAAATAAT+GGG 0.325586 3_1:-93509112 Msa0388960:CDS
TCAATCTGATGCCATGAATT+TGG 0.325693 3_1:-93506242 Msa0388960:CDS
GGGGCGAGACACACGTTAAC+CGG 0.328595 3_1:-93513422 Msa0388960:CDS
GCCATGAATTTGGTCAATTC+AGG 0.332081 3_1:-93506232 Msa0388960:CDS
AAACATCGAAGAAATCCTTA+TGG 0.334740 3_1:-93514787 Msa0388960:CDS
CTTGGAATCAGTACCCTTGA+TGG 0.340392 3_1:-93508961 Msa0388960:CDS
GAAAATATTATTCAATTTGT+AGG 0.342246 3_1:-93507954 Msa0388960:CDS
TCCTTCTCCAAGTTCGAATA+GGG 0.349178 3_1:+93509387 None:intergenic
CAGACAGAGCAGAAAATTCT+TGG 0.352843 3_1:+93514826 None:intergenic
ACAGGTGAAAAGGAAGAAAA+AGG 0.355624 3_1:-93514920 Msa0388960:CDS
ACTAATCGGTGCACCGTTGC+GGG 0.357035 3_1:-93515031 Msa0388960:CDS
GAGTTCCATGGGTGGATGAT+AGG 0.364667 3_1:-93513443 Msa0388960:CDS
AATTGAATATTGCAAAACTT+TGG 0.364976 3_1:-93504244 Msa0388960:three_prime_UTR
GCAGTTGGATTTGATAGTTT+GGG 0.368701 3_1:-93508039 Msa0388960:CDS
GGATATTTGGTTGATGAAGA+TGG 0.368744 3_1:-93506518 Msa0388960:CDS
TTGTTCGGAGTAGCAATAAC+TGG 0.369073 3_1:+93508816 None:intergenic
CTTCTGCAGGGAACTTTCAC+AGG 0.369222 3_1:-93511096 Msa0388960:intron
GTTGCTCCTGCAATGGCTGC+TGG 0.370497 3_1:-93506034 Msa0388960:CDS
TCATGAGGTTGAATTCATTC+AGG 0.376731 3_1:-93513654 Msa0388960:CDS
TTCAGCAGACTTGTTATCAA+TGG 0.381120 3_1:-93509186 Msa0388960:CDS
TATTTCAAAACTTAAGAGAT+TGG 0.383283 3_1:-93508091 Msa0388960:CDS
AGCAAATGATTTCAGATTTG+TGG 0.386415 3_1:-93515233 Msa0388960:five_prime_UTR
TTTGGTAACACAACACTAAT+CGG 0.386652 3_1:-93515045 Msa0388960:CDS
CCAGCACCAGCAGCCATTGC+AGG 0.387387 3_1:+93506028 None:intergenic
TGCTGCTGAAATTGCAGAAC+AGG 0.390342 3_1:-93507995 Msa0388960:CDS
ATCCTTCTCCAAGTTCGAAT+AGG 0.391231 3_1:+93509386 None:intergenic
GTTGTTATATGCCAGGGCTT+TGG 0.392809 3_1:-93504337 Msa0388960:intron
GGAGAAGATGATCCTTCATT+TGG 0.396097 3_1:-93515063 Msa0388960:CDS
GCAACAAATTACATCGTTCT+CGG 0.398706 3_1:+93509130 None:intergenic
GCACTTTCAGTTACCTTGTC+AGG 0.401775 3_1:+93512207 None:intergenic
GATATTTGGTTGATGAAGAT+GGG 0.402651 3_1:-93506517 Msa0388960:CDS
AGTGGGTTGATTAATGCTTC+TGG 0.407138 3_1:-93508891 Msa0388960:CDS
ACCTGAATTGACCAAATTCA+TGG 0.407273 3_1:+93506231 None:intergenic
ACCAGACCGAAGCAGCGTTT+TGG 0.407987 3_1:-93508565 Msa0388960:CDS
CACTTGGTTGTGAGGGAGAT+TGG 0.408537 3_1:-93515114 Msa0388960:CDS
GAGCCAGACCAAAATATTCT+TGG 0.409363 3_1:+93511072 None:intergenic
TCATTAAAGTAATCTTCAAT+TGG 0.410427 3_1:+93507868 None:intergenic
TGAGGCAAATGACTGCGTTT+TGG 0.411523 3_1:-93509063 Msa0388960:CDS
CAATGGCTGCTGGTGCTGGA+GGG 0.414076 3_1:-93506024 Msa0388960:CDS
TAATAGTTTGCTTCATAAAG+AGG 0.415011 3_1:-93514716 Msa0388960:CDS
TAACATCATGGAACGATTGT+TGG 0.415278 3_1:-93513490 Msa0388960:CDS
TGTTTCTTAAAACCATGTTA+TGG 0.420149 3_1:+93508244 None:intergenic
TTGCGTTGTTTAACCTGGCC+AGG 0.420927 3_1:-93504045 Msa0388960:three_prime_UTR
TAACTTCAGTTTGGGGCAAT+GGG 0.424388 3_1:-93507777 Msa0388960:CDS
GAACCTTGTCTAATGTGCTT+TGG 0.424928 3_1:-93508123 Msa0388960:CDS
TTGAACTGCGTCAGTGGTAC+AGG 0.425896 3_1:+93506081 None:intergenic
GATACTTAATTATCGTTGCT+TGG 0.426431 3_1:-93508979 Msa0388960:CDS
TTAAGCATTACCAAATTCCT+TGG 0.426681 3_1:-93513327 Msa0388960:CDS
CGACTGCCTTCATTCCCATA+AGG 0.429268 3_1:+93514772 None:intergenic
AGTAGCTTCGGGTCGAAGAC+TGG 0.430133 3_1:+93511050 None:intergenic
AATTGGAGGTGCTTCTTGAA+TGG 0.430261 3_1:+93508668 None:intergenic
GCAAATGATTTCAGATTTGT+GGG 0.430354 3_1:-93515232 Msa0388960:five_prime_UTR
TTCGAGCCAAAACGCTGCTT+CGG 0.430499 3_1:+93508559 None:intergenic
CCTCTACAGCATAAGATTTG+TGG 0.431698 3_1:+93508385 None:intergenic
CAGTCCATAGCCAGTAGCTT+CGG 0.431834 3_1:+93511038 None:intergenic
GCAATGGCTGCTGGTGCTGG+AGG 0.432301 3_1:-93506025 Msa0388960:CDS
AGTTCCATGGGTGGATGATA+GGG 0.434799 3_1:-93513442 Msa0388960:CDS
AAAACTGTTAATGTATTCTC+TGG 0.435262 3_1:-93508795 Msa0388960:CDS
TTAGAGAAGCTAATTGCATA+TGG 0.436088 3_1:-93510381 Msa0388960:CDS
TATGCCAGGGCTTTGGTACA+TGG 0.436145 3_1:-93504330 Msa0388960:intron
GGTACAATTTAACCAGTCAA+TGG 0.436257 3_1:-93513391 Msa0388960:CDS
GTTATCTAACGTGGATGAAA+AGG 0.437193 3_1:-93508691 Msa0388960:CDS
CCTTGCATGTAGGTTGTGGC+TGG 0.440511 3_1:-93505150 Msa0388960:intron
AGATCGCACCTTTCTGTCCA+TGG 0.441320 3_1:+93506298 None:intergenic
AGGACAGTGATTGCACCAAA+TGG 0.442764 3_1:+93508291 None:intergenic
TGAATTCATTCAGGCTGTCC+AGG 0.444923 3_1:-93513645 Msa0388960:CDS
GGCGTTGGTACTCGCGAGAT+GGG 0.447541 3_1:-93512091 Msa0388960:CDS
GCCAAAACGCTGCTTCGGTC+TGG 0.449009 3_1:+93508564 None:intergenic
CTCAGAACCAACAGGTGAAA+AGG 0.449596 3_1:-93514930 Msa0388960:CDS
GTCCTTTGCGTTGTTTAACC+TGG 0.450498 3_1:-93504050 Msa0388960:three_prime_UTR
TGTGGTGATGGACGCCCATT+TGG 0.451658 3_1:-93508306 Msa0388960:CDS
ATAACTTCAGTTTGGGGCAA+TGG 0.452842 3_1:-93507778 Msa0388960:CDS
AACTATTATTATGTTCTTCG+AGG 0.452851 3_1:+93514731 None:intergenic
GAAGCATTAATCAGATTCTA+GGG 0.453325 3_1:-93506540 Msa0388960:intron
ATGAGTGCAGTTTGATGAAC+TGG 0.455477 3_1:-93505110 Msa0388960:CDS
AACATCGAAGAAATCCTTAT+GGG 0.456133 3_1:-93514786 Msa0388960:CDS
TTTCAGTTATGTTAACATCA+TGG 0.462367 3_1:-93513502 Msa0388960:intron
GGACCTTCCGTCAGAGGAGA+TGG 0.462416 3_1:-93512113 Msa0388960:CDS
AATGGCTGCTGGTGCTGGAG+GGG 0.463671 3_1:-93506023 Msa0388960:intron
TAAAAGATGGAGAGAGGAAT+GGG 0.464772 3_1:-93514893 Msa0388960:CDS
CTCTACATGGACCCATTGAC+TGG 0.465205 3_1:+93513379 None:intergenic
GCAGAAGTTGCAAGGGCAGT+TGG 0.466444 3_1:-93508054 Msa0388960:CDS
TCATGTCAGCTAGCATGAGC+TGG 0.469008 3_1:+93510748 None:intergenic
TGAAAAGTACCGCATCTGTT+TGG 0.470770 3_1:-93509451 Msa0388960:CDS
AAAGTGATAAACTTGAAAAG+TGG 0.474708 3_1:+93516151 None:intergenic
CAAATTCCTTGGCTTTGAGC+AGG 0.474838 3_1:-93513316 Msa0388960:intron
GGACAGTGATTGCACCAAAT+GGG 0.480036 3_1:+93508292 None:intergenic
AGTCTTCGACCCGAAGCTAC+TGG 0.480626 3_1:-93511048 Msa0388960:CDS
GGTTGTCGTATACTAATAGA+AGG 0.482254 3_1:-93506211 Msa0388960:intron
AATGGGCAGACACTTACAAA+TGG 0.483770 3_1:-93514876 Msa0388960:CDS
GGGCGAGACACACGTTAACC+GGG 0.486175 3_1:-93513421 Msa0388960:CDS
CAAGAGCTTGAACTACCTCC+TGG 0.486357 3_1:+93513627 None:intergenic
GAAAGAACCCTATTCGAACT+TGG 0.486536 3_1:-93509394 Msa0388960:CDS
AGATGTGTAGTGAGTGGTTC+TGG 0.486916 3_1:-93510423 Msa0388960:CDS
GCTGTTGAAGAAGCATATAA+AGG 0.489901 3_1:-93508336 Msa0388960:CDS
TCAAGGAATTGCATGTAGAC+GGG 0.490134 3_1:-93508425 Msa0388960:CDS
ATATTACCTGATACTGAAAT+GGG 0.490220 3_1:+93510351 None:intergenic
AGATATGTCTCAGAACCAAC+AGG 0.493372 3_1:-93514938 Msa0388960:CDS
GGAGTCTCTTTAATAATTGG+AGG 0.493895 3_1:+93508654 None:intergenic
CACTAATCGGTGCACCGTTG+CGG 0.495422 3_1:-93515032 Msa0388960:CDS
AGTGTTGTGTTACCAAATGA+AGG 0.496093 3_1:+93515051 None:intergenic
TGTTCTTGTTGCTCCTGCAA+TGG 0.500894 3_1:-93506041 Msa0388960:CDS
TCACTTTCTTTGAATTCTCA+AGG 0.501058 3_1:-93516135 Msa0388960:intron
AGAAATCCTTATGGGAATGA+AGG 0.503780 3_1:-93514778 Msa0388960:CDS
TCAATTATGAATATTTGCAC+TGG 0.504139 3_1:-93507675 Msa0388960:CDS
TTTATTGGAGGATTCCATCA+AGG 0.504823 3_1:+93508947 None:intergenic
AAACGAATGCCACCTCTACA+TGG 0.505421 3_1:+93513366 None:intergenic
AAGCTCAGCATAGAAGTTTG+CGG 0.507170 3_1:-93506457 Msa0388960:intron
GGGCGTTGGTACTCGCGAGA+TGG 0.507748 3_1:-93512092 Msa0388960:CDS
AATTTAGATTCAAAGTCCTC+TGG 0.512081 3_1:+93505084 None:intergenic
AAGAGAGGCTTGTCAAAAGC+TGG 0.514339 3_1:-93508187 Msa0388960:CDS
GCTGCACCTCCTAATTTGTA+AGG 0.515123 3_1:+93512399 None:intergenic
GCTCAAGCCATGACTGATCA+AGG 0.517213 3_1:-93504279 Msa0388960:CDS
CAGCCGTCGCATTGGACTCA+AGG 0.517614 3_1:-93508442 Msa0388960:CDS
CTCAAGGAATTGCATGTAGA+CGG 0.517839 3_1:-93508426 Msa0388960:CDS
TCGATGTGGCAGATTGGACA+TGG 0.518356 3_1:+93508488 None:intergenic
ACAATCATCAAAGCCTGGCC+AGG 0.519081 3_1:+93504032 None:intergenic
TGCTTCTGGTATACTTGAGA+AGG 0.519835 3_1:-93508877 Msa0388960:CDS
CCACAAATCTTATGCTGTAG+AGG 0.520720 3_1:-93508385 Msa0388960:CDS
CAAAATAATGGGAAACATGT+TGG 0.521268 3_1:-93509101 Msa0388960:CDS
GGCTTGAGCAATAGTTAGAA+AGG 0.521355 3_1:+93504293 None:intergenic
CAAGCTCTTGAGAGAGTCAT+CGG 0.522020 3_1:-93513614 Msa0388960:CDS
TACAAATTAGGAGGTGCAGC+TGG 0.523027 3_1:-93512396 Msa0388960:CDS
CCGTCAGAGGAGATGGGCGT+TGG 0.525355 3_1:-93512106 Msa0388960:CDS
GATGTATCAACCGCCGGTGA+AGG 0.525605 3_1:-93509261 Msa0388960:CDS
GTACAATTTAACCAGTCAAT+GGG 0.525972 3_1:-93513390 Msa0388960:CDS
AAGGTGGAAAACTTACATGA+TGG 0.526542 3_1:-93508858 Msa0388960:CDS
GGACAGTATAGACGTCTAGT+TGG 0.527995 3_1:-93512058 Msa0388960:CDS
CATAGATTCCACAGTCGGTA+AGG 0.529706 3_1:+93508154 None:intergenic
TATCTCCTTTAACCAGCTTG+TGG 0.532153 3_1:+93507638 None:intergenic
ACATCTCACACATGAAACTC+TGG 0.532354 3_1:+93512244 None:intergenic
TTATTGGAGGATTCCATCAA+GGG 0.532827 3_1:+93508948 None:intergenic
TGATTTCAGATTTGTGGGGA+GGG 0.533573 3_1:-93515227 Msa0388960:five_prime_UTR
TTTCGATGTCATGGACGTCC+CGG 0.537020 3_1:-93509507 Msa0388960:CDS
AATTGAAATATATTAACACT+AGG 0.538651 3_1:+93507692 None:intergenic
TTGTCTCCTTACAAATTAGG+AGG 0.539458 3_1:-93512405 Msa0388960:CDS
CGACCCGAAGCTACTGGCTA+TGG 0.539992 3_1:-93511042 Msa0388960:CDS
AGGTGGAAAACTTACATGAT+GGG 0.540348 3_1:-93508857 Msa0388960:CDS
ATGGGCAGACACTTACAAAT+GGG 0.541305 3_1:-93514875 Msa0388960:CDS
AAAACGCTGCTTCGGTCTGG+TGG 0.542924 3_1:+93508567 None:intergenic
GCAAGCACAAAGGCATCACT+TGG 0.542952 3_1:-93515130 Msa0388960:CDS
ACTTTAATGAATTGTGGCTG+AGG 0.543957 3_1:-93507855 Msa0388960:CDS
CATGAAAGATTTAACTGTTG+CGG 0.544755 3_1:-93509350 Msa0388960:CDS
GGAAAGCAAGCAGGTTAAGA+TGG 0.545078 3_1:-93509486 Msa0388960:CDS
ACTATTATTATGTTCTTCGA+GGG 0.547023 3_1:+93514732 None:intergenic
CCGCATCACAGCCGTCGCAT+TGG 0.547325 3_1:-93508450 Msa0388960:CDS
AAAGTACCGCATCTGTTTGG+TGG 0.547985 3_1:-93509448 Msa0388960:CDS
AAGATTACTTTAATGAATTG+TGG 0.548194 3_1:-93507861 Msa0388960:CDS
CAAATTTACCTTACCGACTG+TGG 0.549360 3_1:-93508162 Msa0388960:CDS
TCAGTATATCCACCCTTCAC+CGG 0.549465 3_1:+93509248 None:intergenic
CTTTGGATGCATCATGATGC+TGG 0.550394 3_1:-93504227 Msa0388960:three_prime_UTR
AAGCAAAACCATGGACAGAA+AGG 0.550979 3_1:-93506306 Msa0388960:CDS
GGTTGTTAAAAGATGGAGAG+AGG 0.553521 3_1:-93514899 Msa0388960:CDS
TTCATCCCTCCTCCAATGGT+TGG 0.555575 3_1:+93515183 None:intergenic
TTGCTGCCAACCATTGGAGG+AGG 0.555674 3_1:-93515189 Msa0388960:CDS
TACACAGCCTTGATCAGTCA+TGG 0.556808 3_1:+93504272 None:intergenic
GGACGTCCCGGAAAGCAAGC+AGG 0.557424 3_1:-93509495 Msa0388960:CDS
ATTGATTTAGAAATTGGACC+TGG 0.560041 3_1:-93515084 Msa0388960:CDS
GAGCCAAAGCAGAAGTTGCA+AGG 0.560842 3_1:-93508062 Msa0388960:CDS
ATGTTGCTGCCAACCATTGG+AGG 0.561385 3_1:-93515192 Msa0388960:CDS
GACATTGTGTCATTGACCCT+TGG 0.562219 3_1:+93504195 None:intergenic
GTAATCTCAGCATGAGCAGT+GGG 0.564892 3_1:+93508216 None:intergenic
AGCCAAAGCAGAAGTTGCAA+GGG 0.564961 3_1:-93508061 Msa0388960:CDS
GGATCAGTTCATTAATAAAG+TGG 0.565868 3_1:-93509219 Msa0388960:CDS
AGTAATCTCAGCATGAGCAG+TGG 0.566858 3_1:+93508215 None:intergenic
TCATGTTACATCTGAACAAG+AGG 0.567586 3_1:-93508730 Msa0388960:CDS
TTAAAAGATGGAGAGAGGAA+TGG 0.567654 3_1:-93514894 Msa0388960:CDS
ATGATTTCAGATTTGTGGGG+AGG 0.569887 3_1:-93515228 Msa0388960:five_prime_UTR
AGCCTCCAAAGATAAAATCA+TGG 0.570668 3_1:-93514677 Msa0388960:CDS
GTAATGCTTAAATTCATCGA+CGG 0.572109 3_1:+93513339 None:intergenic
AAAGGCATCACTTGGTTGTG+AGG 0.572466 3_1:-93515122 Msa0388960:CDS
CGCCCATCTCCTCTGACGGA+AGG 0.572515 3_1:+93512110 None:intergenic
CAGAACTTGAACTGCGTCAG+TGG 0.574397 3_1:+93506075 None:intergenic
TGAATGTTGCTGCCAACCAT+TGG 0.574459 3_1:-93515195 Msa0388960:CDS
GCATGGTGAGAGCAAGCAGA+TGG 0.575621 3_1:-93514992 Msa0388960:CDS
AATGAAGGATCATCTTCTCC+AGG 0.576398 3_1:+93515066 None:intergenic
AGGAGGGATGAATTCTGCAT+TGG 0.577230 3_1:-93515172 Msa0388960:CDS
ATGTATCAACCGCCGGTGAA+GGG 0.577296 3_1:-93509260 Msa0388960:CDS
TCACAACAATCATCAAAGCC+TGG 0.578251 3_1:+93504027 None:intergenic
CAGTTGGATTTGATAGTTTG+GGG 0.579886 3_1:-93508038 Msa0388960:CDS
ATTGAAATATATTAACACTA+GGG 0.580160 3_1:+93507693 None:intergenic
CTTATGTCGATGTGAAAGAC+GGG 0.580512 3_1:-93514852 Msa0388960:CDS
AGTCCATAGCCAGTAGCTTC+GGG 0.580884 3_1:+93511039 None:intergenic
CCAATGCGACGGCTGTGATG+CGG 0.580893 3_1:+93508450 None:intergenic
GATCGTGTGATCTTTATTGG+AGG 0.581481 3_1:+93508935 None:intergenic
CATGTCAGCTAGCATGAGCT+GGG 0.581909 3_1:+93510749 None:intergenic
AGTTATAAGCTGCCATAACA+TGG 0.583004 3_1:-93508256 Msa0388960:CDS
AAGTACCGCATCTGTTTGGT+GGG 0.583147 3_1:-93509447 Msa0388960:CDS
TTTATGTTACAAATTCTACA+AGG 0.584894 3_1:+93504152 None:intergenic
GACCTTCCGTCAGAGGAGAT+GGG 0.585077 3_1:-93512112 Msa0388960:CDS
ACCCTATTCGAACTTGGAGA+AGG 0.585464 3_1:-93509388 Msa0388960:CDS
ATAATATTTGGACCGAGCAT+AGG 0.586813 3_1:+93506333 None:intergenic
TAAATTGTACCCGAAACCCC+CGG 0.588382 3_1:+93513403 None:intergenic
CGAAGCTACTGGCTATGGAC+TGG 0.589990 3_1:-93511037 Msa0388960:intron
AAGCTCTTGAGAGAGTCATC+GGG 0.590180 3_1:-93513613 Msa0388960:CDS
GTTCCATGGGTGGATGATAG+GGG 0.590231 3_1:-93513441 Msa0388960:CDS
TATCAACCGCCGGTGAAGGG+TGG 0.592454 3_1:-93509257 Msa0388960:CDS
GGAAGCAACGCTCGTCGCCA+CGG 0.594613 3_1:-93509283 Msa0388960:CDS
AAGGCATCACTTGGTTGTGA+GGG 0.595050 3_1:-93515121 Msa0388960:CDS
GTAATACCTGCTCAAAGCCA+AGG 0.595738 3_1:+93513310 None:intergenic
AAAGGTGTTGAATGTGGTGA+TGG 0.595770 3_1:-93508318 Msa0388960:CDS
AGAATTCATCCCTCCTCCAA+TGG 0.597721 3_1:+93515179 None:intergenic
GCTTATGTCGATGTGAAAGA+CGG 0.597982 3_1:-93514853 Msa0388960:CDS
TGAGATTACTTCTATAAGAG+AGG 0.598646 3_1:-93508202 Msa0388960:CDS
CAGTCAATGGGTCCATGTAG+AGG 0.599685 3_1:-93513378 Msa0388960:CDS
TCTGACAGCATTCCACAAGC+TGG 0.600204 3_1:-93507650 Msa0388960:CDS
AGGAGATACACTATATCAGA+AGG 0.608277 3_1:-93507623 Msa0388960:CDS
TGTTTCATAACTTCAGTTTG+GGG 0.608886 3_1:-93507784 Msa0388960:CDS
ACTTGCACATTCTGGTAACA+TGG 0.609000 3_1:+93508911 None:intergenic
ACTGTTAATGTATTCTCTGG+AGG 0.611062 3_1:-93508792 Msa0388960:CDS
GAATCTTCTGCAGAAGAGCA+TGG 0.611081 3_1:-93515009 Msa0388960:CDS
ATGCGACGGCTGTGATGCGG+CGG 0.611691 3_1:+93508453 None:intergenic
ATATGAATTGTTATCTAACG+TGG 0.616529 3_1:-93508700 Msa0388960:CDS
GCCACGGATGTATCAACCGC+CGG 0.617157 3_1:-93509267 Msa0388960:CDS
CAGTTACCTTGTCAGGACCA+AGG 0.617519 3_1:+93512214 None:intergenic
ATGCTGGTATTTATCACCAA+GGG 0.621138 3_1:-93504211 Msa0388960:three_prime_UTR
TCTGCAGAAGATTCCCGCAA+CGG 0.624839 3_1:+93515018 None:intergenic
ATGTTACCAGAATGTGCAAG+TGG 0.624981 3_1:-93508909 Msa0388960:CDS
GTATATCCACCCTTCACCGG+CGG 0.625004 3_1:+93509251 None:intergenic
ATATTAGGACCTTCCGTCAG+AGG 0.628155 3_1:-93512119 Msa0388960:intron
CCAACGCCCATCTCCTCTGA+CGG 0.628777 3_1:+93512106 None:intergenic
GATGGGGTTCTGATGAACAC+TGG 0.629127 3_1:-93508840 Msa0388960:CDS
GTGGCAGATTGGACATGGGT+CGG 0.629943 3_1:+93508493 None:intergenic
TGAATGAATTCAACCTCATG+AGG 0.631053 3_1:+93513656 None:intergenic
TCATTACCTTGGTCCTGACA+AGG 0.631247 3_1:-93512220 Msa0388960:intron
TGAGAGCAAGCAGATGGCGA+CGG 0.631636 3_1:-93514986 Msa0388960:CDS
ATTATGATGAAGCAAAACCA+TGG 0.633955 3_1:-93506315 Msa0388960:CDS
TTCTGCAGGGAACTTTCACA+GGG 0.634361 3_1:-93511095 Msa0388960:intron
ATTCCTTGAGTCCAATGCGA+CGG 0.635670 3_1:+93508439 None:intergenic
TGTGAGATGTATCATTACCT+TGG 0.636503 3_1:-93512231 Msa0388960:CDS
AAATTAGGAGGTGCAGCTGG+TGG 0.637075 3_1:-93512393 Msa0388960:CDS
TGAACTGCGTCAGTGGTACA+GGG 0.638519 3_1:+93506082 None:intergenic
GCATATAAAGGTGTTGAATG+TGG 0.638640 3_1:-93508324 Msa0388960:CDS
CTGACGCAGTTCAAGTTCTG+AGG 0.640777 3_1:-93506072 Msa0388960:CDS
CAAGGAATTGCATGTAGACG+GGG 0.642322 3_1:-93508424 Msa0388960:CDS
GCGAGACACACGTTAACCGG+GGG 0.642563 3_1:-93513419 Msa0388960:CDS
GGTGGAAAACTTACATGATG+GGG 0.642888 3_1:-93508856 Msa0388960:CDS
TGGTGGTCGATGTGGCAGAT+TGG 0.644687 3_1:+93508482 None:intergenic
TCAATGGGTCCATGTAGAGG+TGG 0.644762 3_1:-93513375 Msa0388960:CDS
TTCTGGTATACTTGAGAAGG+TGG 0.646137 3_1:-93508874 Msa0388960:CDS
GAAGGGTGGATATACTGAAG+AGG 0.646866 3_1:-93509243 Msa0388960:CDS
TCGCCCCTATCATCCACCCA+TGG 0.647927 3_1:+93513438 None:intergenic
GGCGAGACACACGTTAACCG+GGG 0.648075 3_1:-93513420 Msa0388960:CDS
GGCCAGGTTAAACAACGCAA+AGG 0.650078 3_1:+93504048 None:intergenic
ACTATTCAAAGACCTATGCT+CGG 0.650401 3_1:-93506345 Msa0388960:CDS
AGAAGCATAGATTCCACAGT+CGG 0.650853 3_1:+93508149 None:intergenic
CAAATGATTTCAGATTTGTG+GGG 0.652591 3_1:-93515231 Msa0388960:five_prime_UTR
GGGTGGATATACTGAAGAGG+CGG 0.655174 3_1:-93509240 Msa0388960:CDS
TGCTGCCAACCATTGGAGGA+GGG 0.661328 3_1:-93515188 Msa0388960:CDS
GCGTTGGTACTCGCGAGATG+GGG 0.667931 3_1:-93512090 Msa0388960:CDS
TTTGATGAACTGGTCACCAG+AGG 0.669222 3_1:-93505100 Msa0388960:CDS
GACATGAATAAAGAACTCAA+AGG 0.675264 3_1:-93510732 Msa0388960:CDS
TGAAGTGGGTGACAAAAGAG+AGG 0.681965 3_1:-93509039 Msa0388960:CDS
GATGCTGGTATTTATCACCA+AGG 0.685527 3_1:-93504212 Msa0388960:three_prime_UTR
TGGTGCAGATTTGCATCATG+AGG 0.686555 3_1:-93509081 Msa0388960:CDS
ACCGGCGGTTGATACATCCG+TGG 0.687874 3_1:+93509266 None:intergenic
TCCTGCAGATGTGTAGTGAG+TGG 0.690117 3_1:-93510429 Msa0388960:intron
ATTCATTCAGGCTGTCCAGG+AGG 0.691635 3_1:-93513642 Msa0388960:CDS
ATTTGATTCAGCAAGCACAA+AGG 0.692477 3_1:-93515140 Msa0388960:CDS
GCACCAAAGCACATTAGACA+AGG 0.693282 3_1:+93508120 None:intergenic
AAGCATTAATCAGATTCTAG+GGG 0.694097 3_1:-93506539 Msa0388960:intron
CGATGTGGCAGATTGGACAT+GGG 0.709299 3_1:+93508489 None:intergenic
TTGATCAATCTCATTCTGTG+TGG 0.711366 3_1:+93506261 None:intergenic
TCTATCCCACCAAACAGATG+CGG 0.724005 3_1:+93509442 None:intergenic
TGTTACCAGAATGTGCAAGT+GGG 0.772689 3_1:-93508908 Msa0388960:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAACTGATTATGAAAA+GGG - chr3_1:93516016-93516035 Msa0388960:intron 15.0%
!! AATTGAATATTGCAAAACTT+TGG - chr3_1:93515906-93515925 Msa0388960:intron 20.0%
!! TTTATGTTACAAATTCTACA+AGG + chr3_1:93516001-93516020 None:intergenic 20.0%
!! CATAAAAACTGATTATGAAA+AGG - chr3_1:93516015-93516034 Msa0388960:intron 20.0%
!! TAAAAACTGATTATGAAAAG+GGG - chr3_1:93516017-93516036 Msa0388960:intron 20.0%
! AAAGTGATAAACTTGAAAAG+TGG + chr3_1:93504002-93504021 None:intergenic 25.0%
! AAAAACTGATTATGAAAAGG+GGG - chr3_1:93516018-93516037 Msa0388960:intron 25.0%
! GTACAATATTGTCAAGAAAA+AGG - chr3_1:93516070-93516089 Msa0388960:intron 25.0%
! GATGATTGTTGTGAAATATT+TGG - chr3_1:93516132-93516151 Msa0388960:intron 25.0%
TCACTTTCTTTGAATTCTCA+AGG - chr3_1:93504015-93504034 Msa0388960:three_prime_UTR 30.0%
TACAAGGAAATATGCTTTCT+TGG + chr3_1:93515985-93516004 None:intergenic 30.0%
! TTGGTTGTTGTTATATGCCA+GGG - chr3_1:93515807-93515826 Msa0388960:intron 35.0%
ATGCTGGTATTTATCACCAA+GGG - chr3_1:93515939-93515958 Msa0388960:intron 35.0%
AAGGGGGAATCAAAATTTAG+AGG - chr3_1:93516034-93516053 Msa0388960:intron 35.0%
GGCTTGAGCAATAGTTAGAA+AGG + chr3_1:93515860-93515879 None:intergenic 40.0%
GATGCTGGTATTTATCACCA+AGG - chr3_1:93515938-93515957 Msa0388960:intron 40.0%
TCACAACAATCATCAAAGCC+TGG + chr3_1:93516126-93516145 None:intergenic 40.0%
GTTGTTATATGCCAGGGCTT+TGG - chr3_1:93515813-93515832 Msa0388960:intron 45.0%
TACACAGCCTTGATCAGTCA+TGG + chr3_1:93515881-93515900 None:intergenic 45.0%
CTTTGGATGCATCATGATGC+TGG - chr3_1:93515923-93515942 Msa0388960:intron 45.0%
! GACATTGTGTCATTGACCCT+TGG + chr3_1:93515958-93515977 None:intergenic 45.0%
GTCCTTTGCGTTGTTTAACC+TGG - chr3_1:93516100-93516119 Msa0388960:intron 45.0%
! TATGCCAGGGCTTTGGTACA+TGG - chr3_1:93515820-93515839 Msa0388960:intron 50.0%
GCTCAAGCCATGACTGATCA+AGG - chr3_1:93515871-93515890 Msa0388960:intron 50.0%
GGCCAGGTTAAACAACGCAA+AGG + chr3_1:93516105-93516124 None:intergenic 50.0%
TTGCGTTGTTTAACCTGGCC+AGG - chr3_1:93516105-93516124 Msa0388960:intron 50.0%
ACAATCATCAAAGCCTGGCC+AGG + chr3_1:93516121-93516140 None:intergenic 50.0%
TGCTCCATGTACCAAAGCCC+TGG + chr3_1:93515827-93515846 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 93503926 93516246 93503926 ID=Msa0388960;Name=Msa0388960
chr3_1 mRNA 93503926 93516246 93503926 ID=Msa0388960-mRNA-1;Parent=Msa0388960;Name=Msa0388960-mRNA-1;_AED=0.17;_eAED=0.18;_QI=154|0.87|0.94|1|0.93|0.88|17|343|1289
chr3_1 exon 93503926 93504344 93503926 ID=Msa0388960-mRNA-1:exon:26507;Parent=Msa0388960-mRNA-1
chr3_1 exon 93504690 93504763 93504690 ID=Msa0388960-mRNA-1:exon:26506;Parent=Msa0388960-mRNA-1
chr3_1 exon 93505080 93505160 93505080 ID=Msa0388960-mRNA-1:exon:26505;Parent=Msa0388960-mRNA-1
chr3_1 exon 93506024 93506115 93506024 ID=Msa0388960-mRNA-1:exon:26504;Parent=Msa0388960-mRNA-1
chr3_1 exon 93506212 93506369 93506212 ID=Msa0388960-mRNA-1:exon:26503;Parent=Msa0388960-mRNA-1
chr3_1 exon 93506458 93506548 93506458 ID=Msa0388960-mRNA-1:exon:26502;Parent=Msa0388960-mRNA-1
chr3_1 exon 93507593 93509566 93507593 ID=Msa0388960-mRNA-1:exon:26501;Parent=Msa0388960-mRNA-1
chr3_1 exon 93510358 93510443 93510358 ID=Msa0388960-mRNA-1:exon:26500;Parent=Msa0388960-mRNA-1
chr3_1 exon 93510726 93510781 93510726 ID=Msa0388960-mRNA-1:exon:26499;Parent=Msa0388960-mRNA-1
chr3_1 exon 93511038 93511109 93511038 ID=Msa0388960-mRNA-1:exon:26498;Parent=Msa0388960-mRNA-1
chr3_1 exon 93512048 93512134 93512048 ID=Msa0388960-mRNA-1:exon:26497;Parent=Msa0388960-mRNA-1
chr3_1 exon 93512221 93512280 93512221 ID=Msa0388960-mRNA-1:exon:26496;Parent=Msa0388960-mRNA-1
chr3_1 exon 93512356 93512442 93512356 ID=Msa0388960-mRNA-1:exon:26495;Parent=Msa0388960-mRNA-1
chr3_1 exon 93513317 93513518 93513317 ID=Msa0388960-mRNA-1:exon:26494;Parent=Msa0388960-mRNA-1
chr3_1 exon 93513602 93513713 93513602 ID=Msa0388960-mRNA-1:exon:26493;Parent=Msa0388960-mRNA-1
chr3_1 exon 93514653 93515257 93514653 ID=Msa0388960-mRNA-1:exon:26492;Parent=Msa0388960-mRNA-1
chr3_1 exon 93516136 93516246 93516136 ID=Msa0388960-mRNA-1:exon:26491;Parent=Msa0388960-mRNA-1
chr3_1 five_prime_UTR 93516136 93516246 93516136 ID=Msa0388960-mRNA-1:five_prime_utr;Parent=Msa0388960-mRNA-1
chr3_1 five_prime_UTR 93515215 93515257 93515215 ID=Msa0388960-mRNA-1:five_prime_utr;Parent=Msa0388960-mRNA-1
chr3_1 CDS 93514653 93515214 93514653 ID=Msa0388960-mRNA-1:cds;Parent=Msa0388960-mRNA-1
chr3_1 CDS 93513602 93513713 93513602 ID=Msa0388960-mRNA-1:cds;Parent=Msa0388960-mRNA-1
chr3_1 CDS 93513317 93513518 93513317 ID=Msa0388960-mRNA-1:cds;Parent=Msa0388960-mRNA-1
chr3_1 CDS 93512356 93512442 93512356 ID=Msa0388960-mRNA-1:cds;Parent=Msa0388960-mRNA-1
chr3_1 CDS 93512221 93512280 93512221 ID=Msa0388960-mRNA-1:cds;Parent=Msa0388960-mRNA-1
chr3_1 CDS 93512048 93512134 93512048 ID=Msa0388960-mRNA-1:cds;Parent=Msa0388960-mRNA-1
chr3_1 CDS 93511038 93511109 93511038 ID=Msa0388960-mRNA-1:cds;Parent=Msa0388960-mRNA-1
chr3_1 CDS 93510726 93510781 93510726 ID=Msa0388960-mRNA-1:cds;Parent=Msa0388960-mRNA-1
chr3_1 CDS 93510358 93510443 93510358 ID=Msa0388960-mRNA-1:cds;Parent=Msa0388960-mRNA-1
chr3_1 CDS 93507593 93509566 93507593 ID=Msa0388960-mRNA-1:cds;Parent=Msa0388960-mRNA-1
chr3_1 CDS 93506458 93506548 93506458 ID=Msa0388960-mRNA-1:cds;Parent=Msa0388960-mRNA-1
chr3_1 CDS 93506212 93506369 93506212 ID=Msa0388960-mRNA-1:cds;Parent=Msa0388960-mRNA-1
chr3_1 CDS 93506024 93506115 93506024 ID=Msa0388960-mRNA-1:cds;Parent=Msa0388960-mRNA-1
chr3_1 CDS 93505080 93505160 93505080 ID=Msa0388960-mRNA-1:cds;Parent=Msa0388960-mRNA-1
chr3_1 CDS 93504690 93504763 93504690 ID=Msa0388960-mRNA-1:cds;Parent=Msa0388960-mRNA-1
chr3_1 CDS 93504269 93504344 93504269 ID=Msa0388960-mRNA-1:cds;Parent=Msa0388960-mRNA-1
chr3_1 three_prime_UTR 93503926 93504268 93503926 ID=Msa0388960-mRNA-1:three_prime_utr;Parent=Msa0388960-mRNA-1
Gene Sequence

>Msa0388960

ATGTTGCTGCCAACCATTGGAGGAGGGATGAATTCTGCATTGGATGATATGAATTTGATTCAGCAAGCACAAAGGCATCACTTGGTTGTGAGGGAGATTGGTGAAGAGATTGATTTAGAAATTGGACCTGGAGAAGATGATCCTTCATTTGGTAACACAACACTAATCGGTGCACCGTTGCGGGAATCTTCTGCAGAAGAGCATGGTGAGAGCAAGCAGATGGCGACGGTTTCTCAGCTTTCTAATGATACTCAAGATATGTCTCAGAACCAACAGGTGAAAAGGAAGAAAAAGGTTGTTAAAAGATGGAGAGAGGAATGGGCAGACACTTACAAATGGGCTTATGTCGATGTGAAAGACGGGACACCAAGAATTTTCTGCTCTGTCTGCAGGGAATTTGGCCGAAAACATCGAAGAAATCCTTATGGGAATGAAGGCAGTCGAAATATGCAGATGAGTGCCCTCGAAGAACATAATAATAGTTTGCTTCATAAAGAGGCTCTTCGTCTTCAATCAGCCTCCAAAGATAAAATCATGGCCGATAAGCCTGTTTATGTAAAAGCGGGATCAATTCTTGAAGCGACACTAAAAAGGGATCCTCATGAGGTTGAATTCATTCAGGCTGTCCAGGAGGTAGTTCAAGCTCTTGAGAGAGTCATCGGGAAAAATTCTCATTATGTTAACATCATGGAACGATTGTTGGAACCTGAACGAATGATTATTTTTCGAGTTCCATGGGTGGATGATAGGGGCGAGACACACGTTAACCGGGGGTTTCGGGTACAATTTAACCAGTCAATGGGTCCATGTAGAGGTGGCATTCGTTTTCATCCGTCGATGAATTTAAGCATTACCAAATTCCTTGGCTTTGAGCAGACCTTAAAGAATGCTTTGTCTCCTTACAAATTAGGAGGTGCAGCTGGTGGAAGTGATTTTGATCCAAAGGGAAAAAGTGATAATGAGATTATGCGATTTTGCCAGAGTTTCATGTGTGAGATGTATCATTACCTTGGTCCTGACAAGGACCTTCCGTCAGAGGAGATGGGCGTTGGTACTCGCGAGATGGGGTATCTTTTTGGACAGTATAGACGTCTAGTTGGTCATTTTCAGGGAACTTTCACAGGGCCAAGAATATTTTGGTCTGGCTCCAGTCTTCGACCCGAAGCTACTGGCTATGGACTGGTTTTCTTTGCCCAGCTCATGCTAGCTGACATGAATAAAGAACTCAAAGGATTAAGATGTGTAGTGAGTGGTTCTGGAAAGATTGCACTGCATGTTTTAGAGAAGCTAATTGCATATGGTGCTCTTCCCATTTCAGTATCAGAAGAATTTTTGGATTGGGAGATTGATGTTGACAGATTTTTCGATGTCATGGACGTCCCGGAAAGCAAGCAGGTTAAGATGGTTGCGAACAGACTGAAAAGTACCGCATCTGTTTGGTGGGATAGACTCGTTGTTCAGAGACAGAGACAAAGAAAGAACCCTATTCGAACTTGGAGAAGGATGAAACAGTTGATGCATGAAAGATTTAACTGTTGCGGTAGATTGTCTCTCTCGCCGCTTGTTTCAATTGAAAAATTGGAGAGGAAGCAACGCTCGTCGCCACGGATGTATCAACCGCCGGTGAAGGGTGGATATACTGAAGAGGCGGATCAGTTCATTAATAAAGTGGATTTTCATTATTCAGCAGACTTGTTATCAATGGAGACAACACAAAATGAATCATATGCTCATCAAACCGAGAACGATGTAATTTGTTGCTCTTTGCAAAATAATGGGAAACATGTTGGTGCAGATTTGCATCATGAGGCAAATGACTGCGTTTTGGCTGAAGTGGGTGACAAAAGAGAGGAACAAGATCATTTCAAACGTACAGATCAAGAAAACTTGATACTTAATTATCGTTGCTTGGAATCAGTACCCTTGATGGAATCCTCCAATAAAGATCACACGATCACCATGTTACCAGAATGTGCAAGTGGGTTGATTAATGCTTCTGGTATACTTGAGAAGGTGGAAAACTTACATGATGGGGTTCTGATGAACACTGGACCAGTTATTGCTACTCCGAACAAAACTGTTAATGTATTCTCTGGAGGTGTTAGTATAAATGATATTATCGTGTCTCATAGTTGTTCTCATGTTACATCTGAACAAGAGGAGCTATCATATGAATTGTTATCTAACGTGGATGAAAAGGCCATTCAAGAAGCACCTCCAATTATTAAAGAGACTCCTGTTATAATTAAAGATACTGAACAGATTAACTCTTTAATGGCTGAAGTCAATAATTTGAAGAAACCACCAGACCGAAGCAGCGTTTTGGCTCGAATCAAACTGCAGAACTTGAGTACTTCTGTTGAGAAGAATGAGCTCCGACCCATGTCCAATCTGCCACATCGACCACCAGCAAAACCGCCGCATCACAGCCGTCGCATTGGACTCAAGGAATTGCATGTAGACGGGGTTCAGTTCAGATTTTGCCACAAATCTTATGCTGTAGAGGATAGAGACCAAAAGTTCATAACAAAAGCTGTTGAAGAAGCATATAAAGGTGTTGAATGTGGTGATGGACGCCCATTTGGTGCAATCACTGTCCTAAAAGATGAAGTAGTTATAAGCTGCCATAACATGGTTTTAAGAAACAAAGATCCCACTGCTCATGCTGAGATTACTTCTATAAGAGAGGCTTGTCAAAAGCTGGTTCAAATTTACCTTACCGACTGTGGAATCTATGCTTCTTGTGAACCTTGTCTAATGTGCTTTGGTGCCATTAATATTTCAAAACTTAAGAGATTGGTTTATGGAGCCAAAGCAGAAGTTGCAAGGGCAGTTGGATTTGATAGTTTGGGGATAAAAAAAATAGACGGCAATGCTGCTGAAATTGCAGAACAGGTATTTGAGAAGAAAAAGGGAAAATATTATTCAATTTGTAGGAAGATCTACTTTAGTATGATTTGTTATGCTCTTAGGAATTTCAATTCTTCAAGTTCTAGCACGCCAATTGAAGATTACTTTAATGAATTGTGGCTGAGGAACTTGACAAATCTTACTTCATATTCCATCCATATTTTTTGGAGAATTTGTTTCATAACTTCAGTTTGGGGCAATGGGCAATACATTCTTGGTTACATACTACAACATGAGTCAAACTCAGCAGTTTCATTGCAAAATTCCCTAGTGTTAATATATTTCAATTATGAATATTTGCACTGGTCTCTGACAGCATTCCACAAGCTGGTTAAAGGAGATACACTATATCAGAAGGCTATACTGCTTGCTTACTTGAAACTGCACTATTCTAGGGGATATTTGGTTGATGAAGATGGGTTTGACTACATGAAAGTACAATTTTTGAGAGACATCAAAGCTCAGCATAGAAGTTTGCGAGACTATTCAAAGACCTATGCTCGGTCCAAATATTATGATGAAGCAAAACCATGGACAGAAAGGTGCGATCTTGCATTTGCTTGTGCCACACAGAATGAGATTGATCAATCTGATGCCATGAATTTGGTCAATTCAGGTTGTCGTATACTAATAGAAGGTTCAAACATGCCCTGTACCACTGACGCAGTTCAAGTTCTGAGGAAAGCTAATGTTCTTGTTGCTCCTGCAATGGCTGCTGGTGCTGGAGGGGTTGTGGCTGGAGAACTTGAACTGAATCATGAGTGCAGTTTGATGAACTGGTCACCAGAGGACTTTGAATCTAAATTACAGGAAGCAATGAAACAGACTTATCAAAGAGCTATAAAAGCTGCAACTGATTTTGGTTATCAAAAAGAAAGCCCCGAGGCTTTGGTACATGGAGCAGTTATCTCTGCCTTTCTAACTATTGCTCAAGCCATGACTGATCAAGGCTGTGTATAA
Protein sequence

>Msa0388960

MLLPTIGGGMNSALDDMNLIQQAQRHHLVVREIGEEIDLEIGPGEDDPSFGNTTLIGAPLRESSAEEHGESKQMATVSQLSNDTQDMSQNQQVKRKKKVVKRWREEWADTYKWAYVDVKDGTPRIFCSVCREFGRKHRRNPYGNEGSRNMQMSALEEHNNSLLHKEALRLQSASKDKIMADKPVYVKAGSILEATLKRDPHEVEFIQAVQEVVQALERVIGKNSHYVNIMERLLEPERMIIFRVPWVDDRGETHVNRGFRVQFNQSMGPCRGGIRFHPSMNLSITKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMCEMYHYLGPDKDLPSEEMGVGTREMGYLFGQYRRLVGHFQGTFTGPRIFWSGSSLRPEATGYGLVFFAQLMLADMNKELKGLRCVVSGSGKIALHVLEKLIAYGALPISVSEEFLDWEIDVDRFFDVMDVPESKQVKMVANRLKSTASVWWDRLVVQRQRQRKNPIRTWRRMKQLMHERFNCCGRLSLSPLVSIEKLERKQRSSPRMYQPPVKGGYTEEADQFINKVDFHYSADLLSMETTQNESYAHQTENDVICCSLQNNGKHVGADLHHEANDCVLAEVGDKREEQDHFKRTDQENLILNYRCLESVPLMESSNKDHTITMLPECASGLINASGILEKVENLHDGVLMNTGPVIATPNKTVNVFSGGVSINDIIVSHSCSHVTSEQEELSYELLSNVDEKAIQEAPPIIKETPVIIKDTEQINSLMAEVNNLKKPPDRSSVLARIKLQNLSTSVEKNELRPMSNLPHRPPAKPPHHSRRIGLKELHVDGVQFRFCHKSYAVEDRDQKFITKAVEEAYKGVECGDGRPFGAITVLKDEVVISCHNMVLRNKDPTAHAEITSIREACQKLVQIYLTDCGIYASCEPCLMCFGAINISKLKRLVYGAKAEVARAVGFDSLGIKKIDGNAAEIAEQVFEKKKGKYYSICRKIYFSMICYALRNFNSSSSSTPIEDYFNELWLRNLTNLTSYSIHIFWRICFITSVWGNGQYILGYILQHESNSAVSLQNSLVLIYFNYEYLHWSLTAFHKLVKGDTLYQKAILLAYLKLHYSRGYLVDEDGFDYMKVQFLRDIKAQHRSLRDYSKTYARSKYYDEAKPWTERCDLAFACATQNEIDQSDAMNLVNSGCRILIEGSNMPCTTDAVQVLRKANVLVAPAMAAGAGGVVAGELELNHECSLMNWSPEDFESKLQEAMKQTYQRAIKAATDFGYQKESPEALVHGAVISAFLTIAQAMTDQGCV*