Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0503090 | KEH34026.1 | 76.786 | 336 | 4 | 4 | 1 | 262 | 1 | 336 | 2.72e-170 | 483 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0503090 | sp|Q39218|SAT3_ARATH | 51.786 | 336 | 88 | 4 | 1 | 262 | 56 | 391 | 1.31e-104 | 311 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0503090 | A0A072UX64 | 76.786 | 336 | 4 | 4 | 1 | 262 | 1 | 336 | 1.30e-170 | 483 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0503090 | Msa0610280 | 0.804045 | 2.608175e-49 | -8.615850e-47 |
| Msa0503090 | Msa1214400 | 0.800264 | 1.563464e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0503090 | MtrunA17_Chr3g0101841 | 76.786 | 336 | 4 | 4 | 1 | 262 | 58 | 393 | 7.43e-174 | 484 |
| Msa0503090 | MtrunA17_Chr5g0446271 | 57.246 | 276 | 81 | 5 | 22 | 262 | 50 | 323 | 2.96e-93 | 277 |
| Msa0503090 | MtrunA17_Chr8g0347531 | 51.292 | 271 | 66 | 2 | 58 | 262 | 73 | 343 | 3.47e-83 | 253 |
| Msa0503090 | MtrunA17_Chr5g0406711 | 41.991 | 231 | 78 | 2 | 71 | 250 | 79 | 304 | 1.05e-51 | 171 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0503090 | AT3G13110.1 | 51.786 | 336 | 88 | 4 | 1 | 262 | 56 | 391 | 1.34e-105 | 311 |
| Msa0503090 | AT1G55920.1 | 51.976 | 329 | 76 | 7 | 1 | 262 | 1 | 314 | 3.20e-97 | 288 |
| Msa0503090 | AT5G56760.1 | 50.746 | 268 | 65 | 3 | 62 | 262 | 45 | 312 | 3.53e-79 | 241 |
| Msa0503090 | AT4G35640.1 | 45.887 | 231 | 69 | 2 | 71 | 250 | 97 | 322 | 9.30e-55 | 180 |
| Msa0503090 | AT2G17640.1 | 42.857 | 231 | 76 | 2 | 71 | 250 | 60 | 285 | 4.28e-51 | 170 |
Find 43 sgRNAs with CRISPR-Local
Find 306 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTCATGAAAAGATCAAAA+AGG | 0.323626 | 3_4:+46025348 | None:intergenic |
| TGCTGGTTCTGTTGTGTTGA+AGG | 0.345531 | 3_4:-46023411 | Msa0503090:CDS |
| AAAACACCATCACCAATCTT+AGG | 0.354890 | 3_4:+46023494 | None:intergenic |
| TTTCCAACAGCAGTAGTTCT+TGG | 0.373815 | 3_4:+46023380 | None:intergenic |
| TAAGATTCCTAGCTCTACTA+TGG | 0.375329 | 3_4:-46023312 | Msa0503090:CDS |
| TCATGTTGATGAGGAATGTT+TGG | 0.409626 | 3_4:+46025647 | None:intergenic |
| TTTCCACCAATCAACTTAGC+TGG | 0.422664 | 3_4:+46023356 | None:intergenic |
| ATTCAGAGATATATGAAGTA+TGG | 0.423521 | 3_4:+46023288 | None:intergenic |
| AATGTTACATTAGGTGGAAC+TGG | 0.429863 | 3_4:-46023539 | Msa0503090:CDS |
| GGAATCTTATCCAACATGAT+AGG | 0.441623 | 3_4:+46023326 | None:intergenic |
| TTGCATAATGTTACATTAGG+TGG | 0.465580 | 3_4:-46023545 | Msa0503090:CDS |
| AATTTGACAAAATTGAATGA+AGG | 0.466844 | 3_4:+46025620 | None:intergenic |
| ATTTGACAAAATTGAATGAA+GGG | 0.478931 | 3_4:+46025621 | None:intergenic |
| TTTGCTGTTGATATTCATCC+TGG | 0.479478 | 3_4:-46023656 | Msa0503090:CDS |
| ATGTTTGGTTTGCGAGAAGG+AGG | 0.480198 | 3_4:+46025662 | None:intergenic |
| ATTCATCCTGGTGCTAAGAT+TGG | 0.483510 | 3_4:-46023644 | Msa0503090:CDS |
| TTTGGTTTGCGAGAAGGAGG+AGG | 0.492117 | 3_4:+46025665 | None:intergenic |
| CATGATTATGTGAAAAGGGT+CGG | 0.498203 | 3_4:+46025594 | None:intergenic |
| GGGAATATTAAGATAGGTGA+TGG | 0.504866 | 3_4:-46023446 | Msa0503090:CDS |
| GGTGGAACTGGTAAAATTTG+TGG | 0.507379 | 3_4:-46023527 | Msa0503090:CDS |
| ATACTTCATATATCTCTGAA+TGG | 0.510821 | 3_4:-46023286 | Msa0503090:CDS |
| CCAACAGCAGTAGTTCTTGG+TGG | 0.511345 | 3_4:+46023383 | None:intergenic |
| TTGGTTTGCGAGAAGGAGGA+GGG | 0.517344 | 3_4:+46025666 | None:intergenic |
| GGAAATCCAGCTAAGTTGAT+TGG | 0.518731 | 3_4:-46023362 | Msa0503090:CDS |
| CCTGGTGCTAAGATTGGTAG+AGG | 0.530740 | 3_4:-46023638 | Msa0503090:CDS |
| CCACCAAGAACTACTGCTGT+TGG | 0.532511 | 3_4:-46023383 | Msa0503090:CDS |
| CCTCTACCAATCTTAGCACC+AGG | 0.543694 | 3_4:+46023638 | None:intergenic |
| CATGCAACAGGAGTTGTAGT+TGG | 0.545667 | 3_4:-46023602 | Msa0503090:CDS |
| GGAATGTTTGGTTTGCGAGA+AGG | 0.546386 | 3_4:+46025659 | None:intergenic |
| GATGGTGCTAAGATTGGTGC+TGG | 0.552639 | 3_4:-46023428 | Msa0503090:CDS |
| ATAGGTGATGGTGCTAAGAT+TGG | 0.558861 | 3_4:-46023434 | Msa0503090:CDS |
| ATCATGACAAGGTTGATTTG+TGG | 0.559728 | 3_4:-46025526 | Msa0503090:CDS |
| AAAAGATAATCCTATCATGT+TGG | 0.560483 | 3_4:-46023336 | Msa0503090:CDS |
| AATCCAGCTAAGTTGATTGG+TGG | 0.576016 | 3_4:-46023359 | Msa0503090:CDS |
| GTATGGTCCATAGTAGAGCT+AGG | 0.579003 | 3_4:+46023305 | None:intergenic |
| TGAAGATTCAAGAAGAAGCA+AGG | 0.580645 | 3_4:-46025502 | Msa0503090:intron |
| GGTGATAGACATCCTAAGAT+TGG | 0.586606 | 3_4:-46023506 | Msa0503090:CDS |
| GTTGGTGAAACTGCTGTGGT+TGG | 0.587988 | 3_4:-46023584 | Msa0503090:CDS |
| GAAGGGTCATCATGTTGATG+AGG | 0.610233 | 3_4:+46025638 | None:intergenic |
| TGGTTTGCGAGAAGGAGGAG+GGG | 0.643319 | 3_4:+46025667 | None:intergenic |
| AGACATCCTAAGATTGGTGA+TGG | 0.645064 | 3_4:-46023500 | Msa0503090:CDS |
| TGTAGTTGGTGAAACTGCTG+TGG | 0.667994 | 3_4:-46023588 | Msa0503090:CDS |
| CTGGTGCTAAGATTGGTAGA+GGG | 0.695256 | 3_4:-46023637 | Msa0503090:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAATAGCTAGATAAAAT+TGG | + | chr3_4:46023502-46023521 | None:intergenic | 15.0% |
| !! | ATAATAATCTAATGTAGAAA+AGG | - | chr3_4:46023872-46023891 | Msa0503090:intron | 15.0% |
| !! | TTAAAACAAGAAAATTAAGA+AGG | - | chr3_4:46024282-46024301 | Msa0503090:intron | 15.0% |
| !! | ATAATAATCTAATGTAGAAA+AGG | - | chr3_4:46023872-46023891 | Msa0503090:intron | 15.0% |
| !! | AAATAATAGCTAGATAAAAT+TGG | + | chr3_4:46023502-46023521 | None:intergenic | 15.0% |
| !! | ATAATAATCTAATGTAGAAA+AGG | - | chr3_4:46023872-46023891 | Msa0503090:intron | 15.0% |
| !! | TTAAAACAAGAAAATTAAGA+AGG | - | chr3_4:46024282-46024301 | Msa0503090:intron | 15.0% |
| !! | ATAATAATCTAATGTAGAAA+AGG | - | chr3_4:46023872-46023891 | Msa0503090:intron | 15.0% |
| !! | ATTTGACAAAATTGAATGAA+GGG | + | chr3_4:46023342-46023361 | None:intergenic | 20.0% |
| !! | AATTTGACAAAATTGAATGA+AGG | + | chr3_4:46023343-46023362 | None:intergenic | 20.0% |
| !!! | TTTTCATGATTATGTGAAAA+GGG | + | chr3_4:46023373-46023392 | None:intergenic | 20.0% |
| !!! | TTTTTCATGATTATGTGAAA+AGG | + | chr3_4:46023374-46023393 | None:intergenic | 20.0% |
| !! | ATTCATGAAAAGATCAAAAA+GGG | + | chr3_4:46023614-46023633 | None:intergenic | 20.0% |
| !! | TATTCATGAAAAGATCAAAA+AGG | + | chr3_4:46023615-46023634 | None:intergenic | 20.0% |
| !! | AGATTATTATAGATGTTTCT+AGG | + | chr3_4:46023862-46023881 | None:intergenic | 20.0% |
| !! | ACCTATAAATAGACTTATAT+GGG | - | chr3_4:46023940-46023959 | Msa0503090:intron | 20.0% |
| !! | AGATTATTATAGATGTTTCT+AGG | + | chr3_4:46023862-46023881 | None:intergenic | 20.0% |
| !! | ACCTATAAATAGACTTATAT+GGG | - | chr3_4:46023940-46023959 | Msa0503090:intron | 20.0% |
| !!! | ATTTTGCATAATGTTACATT+AGG | - | chr3_4:46025412-46025431 | Msa0503090:CDS | 20.0% |
| !!! | ATTTTAGGGAATATTAAGAT+AGG | - | chr3_4:46025508-46025527 | Msa0503090:CDS | 20.0% |
| !! | ATTTGACAAAATTGAATGAA+GGG | + | chr3_4:46023342-46023361 | None:intergenic | 20.0% |
| !! | AATTTGACAAAATTGAATGA+AGG | + | chr3_4:46023343-46023362 | None:intergenic | 20.0% |
| !!! | TTTTCATGATTATGTGAAAA+GGG | + | chr3_4:46023373-46023392 | None:intergenic | 20.0% |
| !!! | TTTTTCATGATTATGTGAAA+AGG | + | chr3_4:46023374-46023393 | None:intergenic | 20.0% |
| !! | ATTCATGAAAAGATCAAAAA+GGG | + | chr3_4:46023614-46023633 | None:intergenic | 20.0% |
| !! | TATTCATGAAAAGATCAAAA+AGG | + | chr3_4:46023615-46023634 | None:intergenic | 20.0% |
| !! | AGATTATTATAGATGTTTCT+AGG | + | chr3_4:46023862-46023881 | None:intergenic | 20.0% |
| !! | ACCTATAAATAGACTTATAT+GGG | - | chr3_4:46023940-46023959 | Msa0503090:intron | 20.0% |
| !! | AGATTATTATAGATGTTTCT+AGG | + | chr3_4:46023862-46023881 | None:intergenic | 20.0% |
| !! | ACCTATAAATAGACTTATAT+GGG | - | chr3_4:46023940-46023959 | Msa0503090:intron | 20.0% |
| !!! | ATTTTGCATAATGTTACATT+AGG | - | chr3_4:46025412-46025431 | Msa0503090:CDS | 20.0% |
| !!! | ATTTTAGGGAATATTAAGAT+AGG | - | chr3_4:46025508-46025527 | Msa0503090:CDS | 20.0% |
| ! | AAAAAAACTTGCATACACAA+AGG | - | chr3_4:46023389-46023408 | Msa0503090:CDS | 25.0% |
| ! | AAAAAACTTGCATACACAAA+GGG | - | chr3_4:46023390-46023409 | Msa0503090:CDS | 25.0% |
| ! | AGATTGTTCTATTAATGTCT+AGG | - | chr3_4:46023825-46023844 | Msa0503090:intron | 25.0% |
| !!! | TTCTAGAACTAGAATAATCT+AGG | + | chr3_4:46023908-46023927 | None:intergenic | 25.0% |
| ! | CACCTATAAATAGACTTATA+TGG | - | chr3_4:46023939-46023958 | Msa0503090:intron | 25.0% |
| ! | ACCCATATAAGTCTATTTAT+AGG | + | chr3_4:46023944-46023963 | None:intergenic | 25.0% |
| ! | TGCAATGTCAATAATATTGA+AGG | - | chr3_4:46023996-46024015 | Msa0503090:intron | 25.0% |
| ! | GTTATAGAAGAACATATAGT+TGG | + | chr3_4:46024176-46024195 | None:intergenic | 25.0% |
| ! | GAGACCAATAACAAATATTA+TGG | - | chr3_4:46024661-46024680 | Msa0503090:intron | 25.0% |
| !!! | CTTGCCATAATATTTGTTAT+TGG | + | chr3_4:46024668-46024687 | None:intergenic | 25.0% |
| ! | ATAACAAATATTATGGCAAG+AGG | - | chr3_4:46024668-46024687 | Msa0503090:intron | 25.0% |
| ! | AGATTGTTCTATTAATGTCT+AGG | - | chr3_4:46023825-46023844 | Msa0503090:intron | 25.0% |
| !!! | TTCTAGAACTAGAATAATCT+AGG | + | chr3_4:46023908-46023927 | None:intergenic | 25.0% |
| ! | CACCTATAAATAGACTTATA+TGG | - | chr3_4:46023939-46023958 | Msa0503090:intron | 25.0% |
| ! | ACCCATATAAGTCTATTTAT+AGG | + | chr3_4:46023944-46023963 | None:intergenic | 25.0% |
| ! | TGCAATGTCAATAATATTGA+AGG | - | chr3_4:46023996-46024015 | Msa0503090:intron | 25.0% |
| ! | CTATATTCCAACAATTTCAA+AGG | - | chr3_4:46025184-46025203 | Msa0503090:intron | 25.0% |
| !!! | TAAAAAGCCTTTGAAATTGT+TGG | + | chr3_4:46025194-46025213 | None:intergenic | 25.0% |
| ! | CACATAAATTATGGTTACAA+GGG | - | chr3_4:46025236-46025255 | Msa0503090:intron | 25.0% |
| ! | AAAAGATAATCCTATCATGT+TGG | - | chr3_4:46025624-46025643 | Msa0503090:CDS | 25.0% |
| ! | ATTCAGAGATATATGAAGTA+TGG | + | chr3_4:46025675-46025694 | None:intergenic | 25.0% |
| ! | ATACTTCATATATCTCTGAA+TGG | - | chr3_4:46025674-46025693 | Msa0503090:CDS | 25.0% |
| ! | AAAAAAACTTGCATACACAA+AGG | - | chr3_4:46023389-46023408 | Msa0503090:CDS | 25.0% |
| ! | AAAAAACTTGCATACACAAA+GGG | - | chr3_4:46023390-46023409 | Msa0503090:CDS | 25.0% |
| ! | AGATTGTTCTATTAATGTCT+AGG | - | chr3_4:46023825-46023844 | Msa0503090:intron | 25.0% |
| !!! | TTCTAGAACTAGAATAATCT+AGG | + | chr3_4:46023908-46023927 | None:intergenic | 25.0% |
| ! | CACCTATAAATAGACTTATA+TGG | - | chr3_4:46023939-46023958 | Msa0503090:intron | 25.0% |
| ! | ACCCATATAAGTCTATTTAT+AGG | + | chr3_4:46023944-46023963 | None:intergenic | 25.0% |
| ! | TGCAATGTCAATAATATTGA+AGG | - | chr3_4:46023996-46024015 | Msa0503090:intron | 25.0% |
| ! | GTTATAGAAGAACATATAGT+TGG | + | chr3_4:46024176-46024195 | None:intergenic | 25.0% |
| ! | GAGACCAATAACAAATATTA+TGG | - | chr3_4:46024661-46024680 | Msa0503090:intron | 25.0% |
| !!! | CTTGCCATAATATTTGTTAT+TGG | + | chr3_4:46024668-46024687 | None:intergenic | 25.0% |
| ! | ATAACAAATATTATGGCAAG+AGG | - | chr3_4:46024668-46024687 | Msa0503090:intron | 25.0% |
| ! | AGATTGTTCTATTAATGTCT+AGG | - | chr3_4:46023825-46023844 | Msa0503090:intron | 25.0% |
| !!! | TTCTAGAACTAGAATAATCT+AGG | + | chr3_4:46023908-46023927 | None:intergenic | 25.0% |
| ! | CACCTATAAATAGACTTATA+TGG | - | chr3_4:46023939-46023958 | Msa0503090:intron | 25.0% |
| ! | ACCCATATAAGTCTATTTAT+AGG | + | chr3_4:46023944-46023963 | None:intergenic | 25.0% |
| ! | TGCAATGTCAATAATATTGA+AGG | - | chr3_4:46023996-46024015 | Msa0503090:intron | 25.0% |
| ! | CTATATTCCAACAATTTCAA+AGG | - | chr3_4:46025184-46025203 | Msa0503090:intron | 25.0% |
| !!! | TAAAAAGCCTTTGAAATTGT+TGG | + | chr3_4:46025194-46025213 | None:intergenic | 25.0% |
| ! | CACATAAATTATGGTTACAA+GGG | - | chr3_4:46025236-46025255 | Msa0503090:intron | 25.0% |
| ! | AAAAGATAATCCTATCATGT+TGG | - | chr3_4:46025624-46025643 | Msa0503090:CDS | 25.0% |
| ! | ATTCAGAGATATATGAAGTA+TGG | + | chr3_4:46025675-46025694 | None:intergenic | 25.0% |
| ! | ATACTTCATATATCTCTGAA+TGG | - | chr3_4:46025674-46025693 | Msa0503090:CDS | 25.0% |
| ! | TTTTGAACATGATCATGACA+AGG | - | chr3_4:46023423-46023442 | Msa0503090:CDS | 30.0% |
| AATGTAGAAAAGGCAAACAA+AGG | - | chr3_4:46023882-46023901 | Msa0503090:intron | 30.0% | |
| ATTGCATCTCAAAGGTTTAA+AGG | + | chr3_4:46023982-46024001 | None:intergenic | 30.0% | |
| TTATTGACATTGCATCTCAA+AGG | + | chr3_4:46023990-46024009 | None:intergenic | 30.0% | |
| ATTAGTGATGAGCATATTGT+AGG | + | chr3_4:46024049-46024068 | None:intergenic | 30.0% | |
| GAAAATTAAGAAGGCTATAG+AGG | - | chr3_4:46024291-46024310 | Msa0503090:intron | 30.0% | |
| GTCCAGGCAATAAATATAAA+TGG | - | chr3_4:46024412-46024431 | Msa0503090:intron | 30.0% | |
| CTCCATTTATATTTATTGCC+TGG | + | chr3_4:46024417-46024436 | None:intergenic | 30.0% | |
| ATTGTTGAAGATTTCTGACA+GGG | + | chr3_4:46024568-46024587 | None:intergenic | 30.0% | |
| ! | AGTTTTCGAAATATGCATCA+AGG | - | chr3_4:46024797-46024816 | Msa0503090:intron | 30.0% |
| AATGTAGAAAAGGCAAACAA+AGG | - | chr3_4:46023882-46023901 | Msa0503090:intron | 30.0% | |
| ATTGCATCTCAAAGGTTTAA+AGG | + | chr3_4:46023982-46024001 | None:intergenic | 30.0% | |
| TTATTGACATTGCATCTCAA+AGG | + | chr3_4:46023990-46024009 | None:intergenic | 30.0% | |
| ATTAGTGATGAGCATATTGT+AGG | + | chr3_4:46024049-46024068 | None:intergenic | 30.0% | |
| ATAGGGTAGCACATAAATTA+TGG | - | chr3_4:46025227-46025246 | Msa0503090:intron | 30.0% | |
| GCACATAAATTATGGTTACA+AGG | - | chr3_4:46025235-46025254 | Msa0503090:intron | 30.0% | |
| TAGCACTCTTGATTCAAAAT+AGG | - | chr3_4:46025269-46025288 | Msa0503090:intron | 30.0% | |
| AGCACTCTTGATTCAAAATA+GGG | - | chr3_4:46025270-46025289 | Msa0503090:intron | 30.0% | |
| TTGCATAATGTTACATTAGG+TGG | - | chr3_4:46025415-46025434 | Msa0503090:CDS | 30.0% | |
| ! | TTTTGAACATGATCATGACA+AGG | - | chr3_4:46023423-46023442 | Msa0503090:CDS | 30.0% |
| AATGTAGAAAAGGCAAACAA+AGG | - | chr3_4:46023882-46023901 | Msa0503090:intron | 30.0% | |
| ATTGCATCTCAAAGGTTTAA+AGG | + | chr3_4:46023982-46024001 | None:intergenic | 30.0% | |
| TTATTGACATTGCATCTCAA+AGG | + | chr3_4:46023990-46024009 | None:intergenic | 30.0% | |
| ATTAGTGATGAGCATATTGT+AGG | + | chr3_4:46024049-46024068 | None:intergenic | 30.0% | |
| GAAAATTAAGAAGGCTATAG+AGG | - | chr3_4:46024291-46024310 | Msa0503090:intron | 30.0% | |
| GTCCAGGCAATAAATATAAA+TGG | - | chr3_4:46024412-46024431 | Msa0503090:intron | 30.0% | |
| CTCCATTTATATTTATTGCC+TGG | + | chr3_4:46024417-46024436 | None:intergenic | 30.0% | |
| ATTGTTGAAGATTTCTGACA+GGG | + | chr3_4:46024568-46024587 | None:intergenic | 30.0% | |
| ! | AGTTTTCGAAATATGCATCA+AGG | - | chr3_4:46024797-46024816 | Msa0503090:intron | 30.0% |
| AATGTAGAAAAGGCAAACAA+AGG | - | chr3_4:46023882-46023901 | Msa0503090:intron | 30.0% | |
| ATTGCATCTCAAAGGTTTAA+AGG | + | chr3_4:46023982-46024001 | None:intergenic | 30.0% | |
| TTATTGACATTGCATCTCAA+AGG | + | chr3_4:46023990-46024009 | None:intergenic | 30.0% | |
| ATTAGTGATGAGCATATTGT+AGG | + | chr3_4:46024049-46024068 | None:intergenic | 30.0% | |
| ATAGGGTAGCACATAAATTA+TGG | - | chr3_4:46025227-46025246 | Msa0503090:intron | 30.0% | |
| GCACATAAATTATGGTTACA+AGG | - | chr3_4:46025235-46025254 | Msa0503090:intron | 30.0% | |
| TAGCACTCTTGATTCAAAAT+AGG | - | chr3_4:46025269-46025288 | Msa0503090:intron | 30.0% | |
| AGCACTCTTGATTCAAAATA+GGG | - | chr3_4:46025270-46025289 | Msa0503090:intron | 30.0% | |
| TTGCATAATGTTACATTAGG+TGG | - | chr3_4:46025415-46025434 | Msa0503090:CDS | 30.0% | |
| ! | TCATGTTGATGAGGAATGTT+TGG | + | chr3_4:46023316-46023335 | None:intergenic | 35.0% |
| CATGATTATGTGAAAAGGGT+CGG | + | chr3_4:46023369-46023388 | None:intergenic | 35.0% | |
| !! | ATCATGACAAGGTTGATTTG+TGG | - | chr3_4:46023434-46023453 | Msa0503090:CDS | 35.0% |
| TGAAGATTCAAGAAGAAGCA+AGG | - | chr3_4:46023458-46023477 | Msa0503090:CDS | 35.0% | |
| GAACATAGCTTATACAAGCA+GGG | + | chr3_4:46023705-46023724 | None:intergenic | 35.0% | |
| TGAACATAGCTTATACAAGC+AGG | + | chr3_4:46023706-46023725 | None:intergenic | 35.0% | |
| TTGGAATATATAGAGCGTGA+GGG | + | chr3_4:46024092-46024111 | None:intergenic | 35.0% | |
| GTCTATGACTCAAACACAAA+AGG | - | chr3_4:46024224-46024243 | Msa0503090:intron | 35.0% | |
| ! | TTGAGTGTCTTATTAGCCAT+AGG | + | chr3_4:46024375-46024394 | None:intergenic | 35.0% |
| ! | CTTAACTTGAGTACAAGCAT+AGG | - | chr3_4:46024454-46024473 | Msa0503090:intron | 35.0% |
| CATGTAGTAGATTCTTGACA+GGG | + | chr3_4:46024503-46024522 | None:intergenic | 35.0% | |
| TCATGTAGTAGATTCTTGAC+AGG | + | chr3_4:46024504-46024523 | None:intergenic | 35.0% | |
| AATCTACTACATGAGTGACA+AGG | - | chr3_4:46024510-46024529 | Msa0503090:intron | 35.0% | |
| CATTGTTGAAGATTTCTGAC+AGG | + | chr3_4:46024569-46024588 | None:intergenic | 35.0% | |
| AATCTTCAACAATGTCGACA+AGG | - | chr3_4:46024575-46024594 | Msa0503090:intron | 35.0% | |
| ACAAATATTATGGCAAGAGG+TGG | - | chr3_4:46024671-46024690 | Msa0503090:intron | 35.0% | |
| !! | ACTATGAAGAGTATCAATGC+AGG | - | chr3_4:46024724-46024743 | Msa0503090:intron | 35.0% |
| TTTCGAAATATGCATCAAGG+AGG | - | chr3_4:46024800-46024819 | Msa0503090:intron | 35.0% | |
| TTGGAATATAGATAGCGTGA+GGG | + | chr3_4:46025175-46025194 | None:intergenic | 35.0% | |
| !!! | TTTTAGCTTGTCAAGCTCAT+AGG | - | chr3_4:46025209-46025228 | Msa0503090:intron | 35.0% |
| !! | TTTAGCTTGTCAAGCTCATA+GGG | - | chr3_4:46025210-46025229 | Msa0503090:intron | 35.0% |
| GATTCAAAATAGGGTTTCTG+AGG | - | chr3_4:46025279-46025298 | Msa0503090:intron | 35.0% | |
| !! | TTTGCTGTTGATATTCATCC+TGG | - | chr3_4:46025304-46025323 | Msa0503090:CDS | 35.0% |
| ! | ATTTTGTTGGATCATGCAAC+AGG | - | chr3_4:46025346-46025365 | Msa0503090:CDS | 35.0% |
| AATGTTACATTAGGTGGAAC+TGG | - | chr3_4:46025421-46025440 | Msa0503090:CDS | 35.0% | |
| AAAACACCATCACCAATCTT+AGG | + | chr3_4:46025469-46025488 | None:intergenic | 35.0% | |
| !!! | ATTGGTGATGGTGTTTTGAT+TGG | - | chr3_4:46025472-46025491 | Msa0503090:intron | 35.0% |
| ! | GTGCTGGAACATGTATTTTA+GGG | - | chr3_4:46025494-46025513 | Msa0503090:intron | 35.0% |
| GGGAATATTAAGATAGGTGA+TGG | - | chr3_4:46025514-46025533 | Msa0503090:CDS | 35.0% | |
| GGAATCTTATCCAACATGAT+AGG | + | chr3_4:46025637-46025656 | None:intergenic | 35.0% | |
| !! | TAAGATTCCTAGCTCTACTA+TGG | - | chr3_4:46025648-46025667 | Msa0503090:CDS | 35.0% |
| ! | TCATGTTGATGAGGAATGTT+TGG | + | chr3_4:46023316-46023335 | None:intergenic | 35.0% |
| CATGATTATGTGAAAAGGGT+CGG | + | chr3_4:46023369-46023388 | None:intergenic | 35.0% | |
| !! | ATCATGACAAGGTTGATTTG+TGG | - | chr3_4:46023434-46023453 | Msa0503090:CDS | 35.0% |
| TGAAGATTCAAGAAGAAGCA+AGG | - | chr3_4:46023458-46023477 | Msa0503090:CDS | 35.0% | |
| GAACATAGCTTATACAAGCA+GGG | + | chr3_4:46023705-46023724 | None:intergenic | 35.0% | |
| TGAACATAGCTTATACAAGC+AGG | + | chr3_4:46023706-46023725 | None:intergenic | 35.0% | |
| TTGGAATATATAGAGCGTGA+GGG | + | chr3_4:46024092-46024111 | None:intergenic | 35.0% | |
| GTCTATGACTCAAACACAAA+AGG | - | chr3_4:46024224-46024243 | Msa0503090:intron | 35.0% | |
| ! | TTGAGTGTCTTATTAGCCAT+AGG | + | chr3_4:46024375-46024394 | None:intergenic | 35.0% |
| ! | CTTAACTTGAGTACAAGCAT+AGG | - | chr3_4:46024454-46024473 | Msa0503090:intron | 35.0% |
| CATGTAGTAGATTCTTGACA+GGG | + | chr3_4:46024503-46024522 | None:intergenic | 35.0% | |
| TCATGTAGTAGATTCTTGAC+AGG | + | chr3_4:46024504-46024523 | None:intergenic | 35.0% | |
| AATCTACTACATGAGTGACA+AGG | - | chr3_4:46024510-46024529 | Msa0503090:intron | 35.0% | |
| CATTGTTGAAGATTTCTGAC+AGG | + | chr3_4:46024569-46024588 | None:intergenic | 35.0% | |
| AATCTTCAACAATGTCGACA+AGG | - | chr3_4:46024575-46024594 | Msa0503090:intron | 35.0% | |
| ACAAATATTATGGCAAGAGG+TGG | - | chr3_4:46024671-46024690 | Msa0503090:intron | 35.0% | |
| !! | ACTATGAAGAGTATCAATGC+AGG | - | chr3_4:46024724-46024743 | Msa0503090:intron | 35.0% |
| TTTCGAAATATGCATCAAGG+AGG | - | chr3_4:46024800-46024819 | Msa0503090:intron | 35.0% | |
| TTGGAATATAGATAGCGTGA+GGG | + | chr3_4:46025175-46025194 | None:intergenic | 35.0% | |
| !!! | TTTTAGCTTGTCAAGCTCAT+AGG | - | chr3_4:46025209-46025228 | Msa0503090:intron | 35.0% |
| !! | TTTAGCTTGTCAAGCTCATA+GGG | - | chr3_4:46025210-46025229 | Msa0503090:intron | 35.0% |
| GATTCAAAATAGGGTTTCTG+AGG | - | chr3_4:46025279-46025298 | Msa0503090:intron | 35.0% | |
| !! | TTTGCTGTTGATATTCATCC+TGG | - | chr3_4:46025304-46025323 | Msa0503090:CDS | 35.0% |
| ! | ATTTTGTTGGATCATGCAAC+AGG | - | chr3_4:46025346-46025365 | Msa0503090:CDS | 35.0% |
| AATGTTACATTAGGTGGAAC+TGG | - | chr3_4:46025421-46025440 | Msa0503090:CDS | 35.0% | |
| AAAACACCATCACCAATCTT+AGG | + | chr3_4:46025469-46025488 | None:intergenic | 35.0% | |
| !!! | ATTGGTGATGGTGTTTTGAT+TGG | - | chr3_4:46025472-46025491 | Msa0503090:intron | 35.0% |
| ! | GTGCTGGAACATGTATTTTA+GGG | - | chr3_4:46025494-46025513 | Msa0503090:intron | 35.0% |
| GGGAATATTAAGATAGGTGA+TGG | - | chr3_4:46025514-46025533 | Msa0503090:CDS | 35.0% | |
| GGAATCTTATCCAACATGAT+AGG | + | chr3_4:46025637-46025656 | None:intergenic | 35.0% | |
| !! | TAAGATTCCTAGCTCTACTA+TGG | - | chr3_4:46025648-46025667 | Msa0503090:CDS | 35.0% |
| GAGGAGACACATTAGTGATA+TGG | + | chr3_4:46024027-46024046 | None:intergenic | 40.0% | |
| AGTGATGAGCATATTGTAGG+AGG | + | chr3_4:46024046-46024065 | None:intergenic | 40.0% | |
| GTTGGAATATATAGAGCGTG+AGG | + | chr3_4:46024093-46024112 | None:intergenic | 40.0% | |
| CGCTCTATATATTCCAACAG+TGG | - | chr3_4:46024095-46024114 | Msa0503090:intron | 40.0% | |
| ! | GACTTGAACTTTAGAGGATC+GGG | + | chr3_4:46024336-46024355 | None:intergenic | 40.0% |
| ! | GGACTTGAACTTTAGAGGAT+CGG | + | chr3_4:46024337-46024356 | None:intergenic | 40.0% |
| TAGTCGGACTTGAACTTTAG+AGG | + | chr3_4:46024342-46024361 | None:intergenic | 40.0% | |
| CATAGGTCTTCGACATTAGT+CGG | + | chr3_4:46024358-46024377 | None:intergenic | 40.0% | |
| GTACTCAAGTTAAGCATCAG+AGG | + | chr3_4:46024448-46024467 | None:intergenic | 40.0% | |
| AGGAGATTCACATGCAACTA+AGG | - | chr3_4:46024595-46024614 | Msa0503090:intron | 40.0% | |
| AGATTCACATGCAACTAAGG+AGG | - | chr3_4:46024598-46024617 | Msa0503090:intron | 40.0% | |
| ATGCAACTAAGGAGGAAGAA+TGG | - | chr3_4:46024606-46024625 | Msa0503090:intron | 40.0% | |
| TCTTGTTGAAGACTTCTGCA+TGG | + | chr3_4:46024633-46024652 | None:intergenic | 40.0% | |
| AGTCTTCAACAAGACTAGCA+AGG | - | chr3_4:46024639-46024658 | Msa0503090:intron | 40.0% | |
| !! | ATGAAGAGTATCAATGCAGG+AGG | - | chr3_4:46024727-46024746 | Msa0503090:intron | 40.0% |
| GAGGAGACACATTAGTGATA+TGG | + | chr3_4:46024027-46024046 | None:intergenic | 40.0% | |
| AGTGATGAGCATATTGTAGG+AGG | + | chr3_4:46024046-46024065 | None:intergenic | 40.0% | |
| GTTGGAATATAGATAGCGTG+AGG | + | chr3_4:46025176-46025195 | None:intergenic | 40.0% | |
| ! | ATTCATCCTGGTGCTAAGAT+TGG | - | chr3_4:46025316-46025335 | Msa0503090:CDS | 40.0% |
| ! | GATTGGTAGAGGGATTTTGT+TGG | - | chr3_4:46025333-46025352 | Msa0503090:CDS | 40.0% |
| GGTGGAACTGGTAAAATTTG+TGG | - | chr3_4:46025433-46025452 | Msa0503090:CDS | 40.0% | |
| GGTGATAGACATCCTAAGAT+TGG | - | chr3_4:46025454-46025473 | Msa0503090:intron | 40.0% | |
| AGACATCCTAAGATTGGTGA+TGG | - | chr3_4:46025460-46025479 | Msa0503090:intron | 40.0% | |
| !! | GGTGCTGGAACATGTATTTT+AGG | - | chr3_4:46025493-46025512 | Msa0503090:intron | 40.0% |
| ! | ATAGGTGATGGTGCTAAGAT+TGG | - | chr3_4:46025526-46025545 | Msa0503090:CDS | 40.0% |
| TTTCCAACAGCAGTAGTTCT+TGG | + | chr3_4:46025583-46025602 | None:intergenic | 40.0% | |
| !! | GGAAATCCAGCTAAGTTGAT+TGG | - | chr3_4:46025598-46025617 | Msa0503090:CDS | 40.0% |
| !! | AATCCAGCTAAGTTGATTGG+TGG | - | chr3_4:46025601-46025620 | Msa0503090:CDS | 40.0% |
| TTTCCACCAATCAACTTAGC+TGG | + | chr3_4:46025607-46025626 | None:intergenic | 40.0% | |
| GAGGAGACACATTAGTGATA+TGG | + | chr3_4:46024027-46024046 | None:intergenic | 40.0% | |
| AGTGATGAGCATATTGTAGG+AGG | + | chr3_4:46024046-46024065 | None:intergenic | 40.0% | |
| GTTGGAATATATAGAGCGTG+AGG | + | chr3_4:46024093-46024112 | None:intergenic | 40.0% | |
| CGCTCTATATATTCCAACAG+TGG | - | chr3_4:46024095-46024114 | Msa0503090:intron | 40.0% | |
| ! | GACTTGAACTTTAGAGGATC+GGG | + | chr3_4:46024336-46024355 | None:intergenic | 40.0% |
| ! | GGACTTGAACTTTAGAGGAT+CGG | + | chr3_4:46024337-46024356 | None:intergenic | 40.0% |
| TAGTCGGACTTGAACTTTAG+AGG | + | chr3_4:46024342-46024361 | None:intergenic | 40.0% | |
| CATAGGTCTTCGACATTAGT+CGG | + | chr3_4:46024358-46024377 | None:intergenic | 40.0% | |
| GTACTCAAGTTAAGCATCAG+AGG | + | chr3_4:46024448-46024467 | None:intergenic | 40.0% | |
| AGGAGATTCACATGCAACTA+AGG | - | chr3_4:46024595-46024614 | Msa0503090:intron | 40.0% | |
| AGATTCACATGCAACTAAGG+AGG | - | chr3_4:46024598-46024617 | Msa0503090:intron | 40.0% | |
| ATGCAACTAAGGAGGAAGAA+TGG | - | chr3_4:46024606-46024625 | Msa0503090:intron | 40.0% | |
| TCTTGTTGAAGACTTCTGCA+TGG | + | chr3_4:46024633-46024652 | None:intergenic | 40.0% | |
| AGTCTTCAACAAGACTAGCA+AGG | - | chr3_4:46024639-46024658 | Msa0503090:intron | 40.0% | |
| !! | ATGAAGAGTATCAATGCAGG+AGG | - | chr3_4:46024727-46024746 | Msa0503090:intron | 40.0% |
| GAGGAGACACATTAGTGATA+TGG | + | chr3_4:46024027-46024046 | None:intergenic | 40.0% | |
| AGTGATGAGCATATTGTAGG+AGG | + | chr3_4:46024046-46024065 | None:intergenic | 40.0% | |
| GTTGGAATATAGATAGCGTG+AGG | + | chr3_4:46025176-46025195 | None:intergenic | 40.0% | |
| ! | ATTCATCCTGGTGCTAAGAT+TGG | - | chr3_4:46025316-46025335 | Msa0503090:CDS | 40.0% |
| ! | GATTGGTAGAGGGATTTTGT+TGG | - | chr3_4:46025333-46025352 | Msa0503090:CDS | 40.0% |
| GGTGGAACTGGTAAAATTTG+TGG | - | chr3_4:46025433-46025452 | Msa0503090:CDS | 40.0% | |
| GGTGATAGACATCCTAAGAT+TGG | - | chr3_4:46025454-46025473 | Msa0503090:intron | 40.0% | |
| AGACATCCTAAGATTGGTGA+TGG | - | chr3_4:46025460-46025479 | Msa0503090:intron | 40.0% | |
| !! | GGTGCTGGAACATGTATTTT+AGG | - | chr3_4:46025493-46025512 | Msa0503090:intron | 40.0% |
| ! | ATAGGTGATGGTGCTAAGAT+TGG | - | chr3_4:46025526-46025545 | Msa0503090:CDS | 40.0% |
| TTTCCAACAGCAGTAGTTCT+TGG | + | chr3_4:46025583-46025602 | None:intergenic | 40.0% | |
| !! | GGAAATCCAGCTAAGTTGAT+TGG | - | chr3_4:46025598-46025617 | Msa0503090:CDS | 40.0% |
| !! | AATCCAGCTAAGTTGATTGG+TGG | - | chr3_4:46025601-46025620 | Msa0503090:CDS | 40.0% |
| TTTCCACCAATCAACTTAGC+TGG | + | chr3_4:46025607-46025626 | None:intergenic | 40.0% | |
| !! | ATGTTTGGTTTGCGAGAAGG+AGG | + | chr3_4:46023301-46023320 | None:intergenic | 45.0% |
| !! | GGAATGTTTGGTTTGCGAGA+AGG | + | chr3_4:46023304-46023323 | None:intergenic | 45.0% |
| GAAGGGTCATCATGTTGATG+AGG | + | chr3_4:46023325-46023344 | None:intergenic | 45.0% | |
| ! | AAGGAGTACATGTAGCCACA+AGG | - | chr3_4:46024243-46024262 | Msa0503090:intron | 45.0% |
| TCAAACAGAGTAGAGCCTTG+TGG | + | chr3_4:46024261-46024280 | None:intergenic | 45.0% | |
| AGAAGGCTATAGAGGAGTTC+AGG | - | chr3_4:46024299-46024318 | Msa0503090:intron | 45.0% | |
| CGACTAATGTCGAAGACCTA+TGG | - | chr3_4:46024356-46024375 | Msa0503090:intron | 45.0% | |
| TTCGAATAGAGCACAAGTCC+AGG | - | chr3_4:46024396-46024415 | Msa0503090:intron | 45.0% | |
| AGTTAAGCATCAGAGGTCAC+AGG | + | chr3_4:46024441-46024460 | None:intergenic | 45.0% | |
| TGAGCAACTACGCACTACAT+TGG | - | chr3_4:46024773-46024792 | Msa0503090:intron | 45.0% | |
| ! | CTGGTGCTAAGATTGGTAGA+GGG | - | chr3_4:46025323-46025342 | Msa0503090:CDS | 45.0% |
| CATGCAACAGGAGTTGTAGT+TGG | - | chr3_4:46025358-46025377 | Msa0503090:CDS | 45.0% | |
| !! | TGTAGTTGGTGAAACTGCTG+TGG | - | chr3_4:46025372-46025391 | Msa0503090:CDS | 45.0% |
| !!! | GATGGTGTTTTGATTGGTGC+TGG | - | chr3_4:46025478-46025497 | Msa0503090:intron | 45.0% |
| !! | TGCTGGTTCTGTTGTGTTGA+AGG | - | chr3_4:46025549-46025568 | Msa0503090:CDS | 45.0% |
| GTATGGTCCATAGTAGAGCT+AGG | + | chr3_4:46025658-46025677 | None:intergenic | 45.0% | |
| !! | ATGTTTGGTTTGCGAGAAGG+AGG | + | chr3_4:46023301-46023320 | None:intergenic | 45.0% |
| !! | GGAATGTTTGGTTTGCGAGA+AGG | + | chr3_4:46023304-46023323 | None:intergenic | 45.0% |
| GAAGGGTCATCATGTTGATG+AGG | + | chr3_4:46023325-46023344 | None:intergenic | 45.0% | |
| ! | AAGGAGTACATGTAGCCACA+AGG | - | chr3_4:46024243-46024262 | Msa0503090:intron | 45.0% |
| TCAAACAGAGTAGAGCCTTG+TGG | + | chr3_4:46024261-46024280 | None:intergenic | 45.0% | |
| AGAAGGCTATAGAGGAGTTC+AGG | - | chr3_4:46024299-46024318 | Msa0503090:intron | 45.0% | |
| CGACTAATGTCGAAGACCTA+TGG | - | chr3_4:46024356-46024375 | Msa0503090:intron | 45.0% | |
| TTCGAATAGAGCACAAGTCC+AGG | - | chr3_4:46024396-46024415 | Msa0503090:intron | 45.0% | |
| AGTTAAGCATCAGAGGTCAC+AGG | + | chr3_4:46024441-46024460 | None:intergenic | 45.0% | |
| TGAGCAACTACGCACTACAT+TGG | - | chr3_4:46024773-46024792 | Msa0503090:intron | 45.0% | |
| ! | CTGGTGCTAAGATTGGTAGA+GGG | - | chr3_4:46025323-46025342 | Msa0503090:CDS | 45.0% |
| CATGCAACAGGAGTTGTAGT+TGG | - | chr3_4:46025358-46025377 | Msa0503090:CDS | 45.0% | |
| !! | TGTAGTTGGTGAAACTGCTG+TGG | - | chr3_4:46025372-46025391 | Msa0503090:CDS | 45.0% |
| !!! | GATGGTGTTTTGATTGGTGC+TGG | - | chr3_4:46025478-46025497 | Msa0503090:intron | 45.0% |
| !! | TGCTGGTTCTGTTGTGTTGA+AGG | - | chr3_4:46025549-46025568 | Msa0503090:CDS | 45.0% |
| GTATGGTCCATAGTAGAGCT+AGG | + | chr3_4:46025658-46025677 | None:intergenic | 45.0% | |
| !! | TTGGTTTGCGAGAAGGAGGA+GGG | + | chr3_4:46023297-46023316 | None:intergenic | 50.0% |
| !! | TTTGGTTTGCGAGAAGGAGG+AGG | + | chr3_4:46023298-46023317 | None:intergenic | 50.0% |
| AGTGGTATCAGAGCTGCGTT+CGG | - | chr3_4:46024113-46024132 | Msa0503090:intron | 50.0% | |
| AGCTGCGTTCGGTCATTAAC+AGG | - | chr3_4:46024124-46024143 | Msa0503090:intron | 50.0% | |
| GCTGCGTTCGGTCATTAACA+GGG | - | chr3_4:46024125-46024144 | Msa0503090:intron | 50.0% | |
| ! | CTTTAGAGGATCGGGCTGTT+AGG | + | chr3_4:46024328-46024347 | None:intergenic | 50.0% |
| CCTCTACCAATCTTAGCACC+AGG | + | chr3_4:46025325-46025344 | None:intergenic | 50.0% | |
| ! | CCTGGTGCTAAGATTGGTAG+AGG | - | chr3_4:46025322-46025341 | Msa0503090:CDS | 50.0% |
| ! | GTTGGTGAAACTGCTGTGGT+TGG | - | chr3_4:46025376-46025395 | Msa0503090:CDS | 50.0% |
| ! | GATGGTGCTAAGATTGGTGC+TGG | - | chr3_4:46025532-46025551 | Msa0503090:CDS | 50.0% |
| CCAACAGCAGTAGTTCTTGG+TGG | + | chr3_4:46025580-46025599 | None:intergenic | 50.0% | |
| CCACCAAGAACTACTGCTGT+TGG | - | chr3_4:46025577-46025596 | Msa0503090:CDS | 50.0% | |
| !! | TTGGTTTGCGAGAAGGAGGA+GGG | + | chr3_4:46023297-46023316 | None:intergenic | 50.0% |
| !! | TTTGGTTTGCGAGAAGGAGG+AGG | + | chr3_4:46023298-46023317 | None:intergenic | 50.0% |
| AGTGGTATCAGAGCTGCGTT+CGG | - | chr3_4:46024113-46024132 | Msa0503090:intron | 50.0% | |
| AGCTGCGTTCGGTCATTAAC+AGG | - | chr3_4:46024124-46024143 | Msa0503090:intron | 50.0% | |
| GCTGCGTTCGGTCATTAACA+GGG | - | chr3_4:46024125-46024144 | Msa0503090:intron | 50.0% | |
| ! | CTTTAGAGGATCGGGCTGTT+AGG | + | chr3_4:46024328-46024347 | None:intergenic | 50.0% |
| CCTCTACCAATCTTAGCACC+AGG | + | chr3_4:46025325-46025344 | None:intergenic | 50.0% | |
| ! | CCTGGTGCTAAGATTGGTAG+AGG | - | chr3_4:46025322-46025341 | Msa0503090:CDS | 50.0% |
| ! | GTTGGTGAAACTGCTGTGGT+TGG | - | chr3_4:46025376-46025395 | Msa0503090:CDS | 50.0% |
| ! | GATGGTGCTAAGATTGGTGC+TGG | - | chr3_4:46025532-46025551 | Msa0503090:CDS | 50.0% |
| CCAACAGCAGTAGTTCTTGG+TGG | + | chr3_4:46025580-46025599 | None:intergenic | 50.0% | |
| CCACCAAGAACTACTGCTGT+TGG | - | chr3_4:46025577-46025596 | Msa0503090:CDS | 50.0% | |
| ! | TGGTTTGCGAGAAGGAGGAG+GGG | + | chr3_4:46023296-46023315 | None:intergenic | 55.0% |
| ATAGAGCGTGAGGGAGCTAG+TGG | + | chr3_4:46024083-46024102 | None:intergenic | 55.0% | |
| ! | CGCAGCTCTGATACCACTGT+TGG | + | chr3_4:46024111-46024130 | None:intergenic | 55.0% |
| AGATAGCGTGAGGGAGCTAG+TGG | + | chr3_4:46025166-46025185 | None:intergenic | 55.0% | |
| ! | TGGTTTGCGAGAAGGAGGAG+GGG | + | chr3_4:46023296-46023315 | None:intergenic | 55.0% |
| ATAGAGCGTGAGGGAGCTAG+TGG | + | chr3_4:46024083-46024102 | None:intergenic | 55.0% | |
| ! | CGCAGCTCTGATACCACTGT+TGG | + | chr3_4:46024111-46024130 | None:intergenic | 55.0% |
| AGATAGCGTGAGGGAGCTAG+TGG | + | chr3_4:46025166-46025185 | None:intergenic | 55.0% | |
| GCGTGAGGGAGCTAGTGGAA+GGG | + | chr3_4:46024078-46024097 | None:intergenic | 60.0% | |
| AGCGTGAGGGAGCTAGTGGA+AGG | + | chr3_4:46024079-46024098 | None:intergenic | 60.0% | |
| GCGTGAGGGAGCTAGTGGTA+GGG | + | chr3_4:46025161-46025180 | None:intergenic | 60.0% | |
| AGCGTGAGGGAGCTAGTGGT+AGG | + | chr3_4:46025162-46025181 | None:intergenic | 60.0% | |
| GCGTGAGGGAGCTAGTGGAA+GGG | + | chr3_4:46024078-46024097 | None:intergenic | 60.0% | |
| AGCGTGAGGGAGCTAGTGGA+AGG | + | chr3_4:46024079-46024098 | None:intergenic | 60.0% | |
| GCGTGAGGGAGCTAGTGGTA+GGG | + | chr3_4:46025161-46025180 | None:intergenic | 60.0% | |
| AGCGTGAGGGAGCTAGTGGT+AGG | + | chr3_4:46025162-46025181 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 46023268 | 46025714 | 46023268 | ID=Msa0503090;Name=Msa0503090 |
| chr3_4 | mRNA | 46023268 | 46025714 | 46023268 | ID=Msa0503090-mRNA-1;Parent=Msa0503090;Name=Msa0503090-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0|0|1|0|0.33|3|0|262 |
| chr3_4 | exon | 46025503 | 46025714 | 46025503 | ID=Msa0503090-mRNA-1:exon:9848;Parent=Msa0503090-mRNA-1 |
| chr3_4 | exon | 46025295 | 46025457 | 46025295 | ID=Msa0503090-mRNA-1:exon:9847;Parent=Msa0503090-mRNA-1 |
| chr3_4 | exon | 46023268 | 46023681 | 46023268 | ID=Msa0503090-mRNA-1:exon:9846;Parent=Msa0503090-mRNA-1 |
| chr3_4 | CDS | 46025503 | 46025714 | 46025503 | ID=Msa0503090-mRNA-1:cds;Parent=Msa0503090-mRNA-1 |
| chr3_4 | CDS | 46025295 | 46025457 | 46025295 | ID=Msa0503090-mRNA-1:cds;Parent=Msa0503090-mRNA-1 |
| chr3_4 | CDS | 46023268 | 46023681 | 46023268 | ID=Msa0503090-mRNA-1:cds;Parent=Msa0503090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
