Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0506430 | XP_039687274.1 | 65.368 | 693 | 169 | 8 | 2 | 625 | 489 | 1179 | 0.0 | 856 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0506430 | A0A072UUI6 | 64.489 | 704 | 160 | 9 | 2 | 625 | 181 | 874 | 0.0 | 844 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0506430 | Msa0506470 | 0.928482 | 2.711309e-92 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0506430 | MtrunA17_Chr3g0091861 | 64.306 | 706 | 160 | 10 | 2 | 625 | 429 | 1124 | 0.0 | 838 |
| Msa0506430 | MtrunA17_Chr3g0108011 | 65.786 | 681 | 150 | 10 | 24 | 625 | 539 | 1215 | 0.0 | 826 |
| Msa0506430 | MtrunA17_Chr3g0107931 | 64.900 | 698 | 164 | 8 | 2 | 625 | 512 | 1202 | 0.0 | 824 |
| Msa0506430 | MtrunA17_Chr3g0108811 | 61.988 | 684 | 173 | 11 | 24 | 625 | 520 | 1198 | 0.0 | 777 |
| Msa0506430 | MtrunA17_Chr3g0108821 | 61.786 | 683 | 167 | 11 | 24 | 625 | 508 | 1177 | 0.0 | 769 |
| Msa0506430 | MtrunA17_Chr3g0108171 | 58.874 | 693 | 130 | 13 | 23 | 572 | 531 | 1211 | 0.0 | 656 |
| Msa0506430 | MtrunA17_Chr3g0107281 | 61.216 | 477 | 135 | 6 | 206 | 634 | 3 | 477 | 0.0 | 546 |
| Msa0506430 | MtrunA17_Chr3g0091851 | 50.459 | 654 | 232 | 12 | 23 | 636 | 444 | 1045 | 6.48e-173 | 527 |
| Msa0506430 | MtrunA17_Chr3g0108151 | 52.096 | 668 | 172 | 20 | 6 | 570 | 498 | 1120 | 4.66e-171 | 528 |
| Msa0506430 | MtrunA17_Chr3g0097641 | 46.549 | 681 | 243 | 16 | 24 | 625 | 484 | 1122 | 1.24e-155 | 478 |
| Msa0506430 | MtrunA17_Chr7g0223931 | 70.796 | 339 | 66 | 2 | 24 | 329 | 337 | 675 | 2.13e-153 | 458 |
| Msa0506430 | MtrunA17_Chr3g0105521 | 48.408 | 628 | 233 | 16 | 25 | 584 | 395 | 999 | 1.19e-151 | 477 |
| Msa0506430 | MtrunA17_Chr3g0108071 | 68.956 | 364 | 80 | 6 | 277 | 632 | 13 | 351 | 7.05e-146 | 448 |
| Msa0506430 | MtrunA17_Chr3g0108221 | 74.751 | 301 | 64 | 4 | 332 | 625 | 1 | 296 | 2.52e-142 | 417 |
| Msa0506430 | MtrunA17_Chr3g0096721 | 44.530 | 649 | 271 | 17 | 24 | 625 | 509 | 1115 | 2.11e-141 | 441 |
| Msa0506430 | MtrunA17_Chr3g0105481 | 44.970 | 676 | 261 | 19 | 25 | 625 | 462 | 1101 | 8.57e-139 | 441 |
| Msa0506430 | MtrunA17_Chr3g0105551 | 46.488 | 598 | 240 | 14 | 34 | 584 | 544 | 1108 | 1.18e-138 | 445 |
| Msa0506430 | MtrunA17_Chr3g0096821 | 43.272 | 654 | 283 | 20 | 24 | 625 | 505 | 1122 | 5.60e-138 | 432 |
| Msa0506430 | MtrunA17_Chr3g0107211 | 39.031 | 702 | 243 | 21 | 25 | 576 | 514 | 1180 | 5.28e-119 | 382 |
| Msa0506430 | MtrunA17_Chr7g0229721 | 44.559 | 487 | 211 | 12 | 24 | 465 | 509 | 981 | 4.47e-112 | 360 |
| Msa0506430 | MtrunA17_Chr3g0107181 | 45.536 | 448 | 173 | 8 | 24 | 403 | 499 | 943 | 2.10e-107 | 347 |
| Msa0506430 | MtrunA17_Chr3g0097021 | 58.020 | 293 | 71 | 5 | 222 | 468 | 1 | 287 | 4.45e-95 | 295 |
| Msa0506430 | MtrunA17_Chr3g0107981 | 71.707 | 205 | 51 | 2 | 206 | 408 | 3 | 202 | 8.86e-94 | 288 |
| Msa0506430 | MtrunA17_Chr3g0106021 | 50.676 | 296 | 134 | 5 | 347 | 636 | 3 | 292 | 2.37e-88 | 280 |
| Msa0506430 | MtrunA17_Chr7g0229751 | 39.248 | 479 | 176 | 13 | 24 | 465 | 462 | 862 | 2.73e-82 | 277 |
| Msa0506430 | MtrunA17_Chr3g0108061 | 63.008 | 246 | 60 | 1 | 24 | 238 | 341 | 586 | 4.13e-80 | 265 |
| Msa0506430 | MtrunA17_Chr3g0097621 | 46.646 | 328 | 110 | 8 | 190 | 465 | 107 | 421 | 9.64e-73 | 241 |
| Msa0506430 | MtrunA17_Chr3g0108781 | 68.750 | 160 | 47 | 3 | 468 | 625 | 1 | 159 | 1.86e-66 | 216 |
| Msa0506430 | MtrunA17_Chr3g0105601 | 51.751 | 257 | 90 | 9 | 328 | 578 | 13 | 241 | 2.16e-65 | 223 |
| Msa0506430 | MtrunA17_Chr3g0106011 | 45.020 | 251 | 92 | 2 | 262 | 466 | 1 | 251 | 3.50e-57 | 194 |
| Msa0506430 | MtrunA17_Chr3g0108111 | 75.373 | 134 | 31 | 2 | 501 | 634 | 2 | 133 | 4.92e-56 | 201 |
| Msa0506430 | MtrunA17_Chr3g0107071 | 40.468 | 299 | 132 | 8 | 177 | 465 | 9 | 271 | 3.43e-43 | 157 |
| Msa0506430 | MtrunA17_Chr1g0160951 | 35.556 | 405 | 200 | 15 | 22 | 379 | 434 | 824 | 9.17e-43 | 166 |
| Msa0506430 | MtrunA17_Chr1g0160951 | 41.892 | 148 | 78 | 3 | 481 | 625 | 831 | 973 | 2.38e-24 | 109 |
| Msa0506430 | MtrunA17_Chr3g0097031 | 65.772 | 149 | 20 | 1 | 24 | 141 | 462 | 610 | 2.13e-42 | 162 |
| Msa0506430 | MtrunA17_Chr7g0223921 | 71.028 | 107 | 30 | 1 | 332 | 437 | 1 | 107 | 4.84e-42 | 147 |
| Msa0506430 | MtrunA17_Chr3g0097611 | 56.204 | 137 | 50 | 4 | 491 | 625 | 1 | 129 | 3.07e-39 | 141 |
| Msa0506430 | MtrunA17_Chr3g0099591 | 27.179 | 677 | 338 | 25 | 15 | 615 | 534 | 1131 | 1.44e-38 | 153 |
| Msa0506430 | MtrunA17_Chr5g0439121 | 28.722 | 571 | 328 | 21 | 56 | 567 | 555 | 1105 | 1.50e-38 | 153 |
| Msa0506430 | MtrunA17_Chr5g0439121 | 23.828 | 512 | 262 | 15 | 227 | 625 | 1009 | 1505 | 3.09e-14 | 76.6 |
| Msa0506430 | MtrunA17_Chr5g0439121 | 31.098 | 164 | 83 | 5 | 493 | 627 | 784 | 946 | 7.45e-14 | 75.5 |
| Msa0506430 | MtrunA17_Chr5g0443761 | 31.658 | 398 | 194 | 10 | 55 | 402 | 440 | 809 | 1.07e-35 | 144 |
| Msa0506430 | MtrunA17_Chr3g0106001 | 45.024 | 211 | 87 | 2 | 25 | 206 | 219 | 429 | 1.82e-34 | 136 |
| Msa0506430 | MtrunA17_Chr3g0099571 | 31.877 | 389 | 220 | 10 | 56 | 411 | 575 | 951 | 3.79e-34 | 139 |
| Msa0506430 | MtrunA17_Chr3g0100261 | 27.683 | 643 | 351 | 20 | 56 | 606 | 579 | 1199 | 9.01e-32 | 132 |
| Msa0506430 | MtrunA17_Chr3g0100231 | 30.130 | 385 | 224 | 11 | 56 | 405 | 286 | 660 | 4.17e-28 | 120 |
| Msa0506430 | MtrunA17_Chr3g0107631 | 38.974 | 195 | 86 | 8 | 281 | 466 | 17 | 187 | 5.38e-27 | 108 |
| Msa0506430 | MtrunA17_Chr3g0107191 | 51.111 | 135 | 60 | 3 | 491 | 621 | 1 | 133 | 1.41e-25 | 103 |
| Msa0506430 | MtrunA17_Chr8g0360991 | 31.771 | 384 | 218 | 11 | 56 | 405 | 578 | 951 | 1.31e-24 | 109 |
| Msa0506430 | MtrunA17_Chr3g0105511 | 45.070 | 142 | 58 | 5 | 324 | 461 | 16 | 141 | 6.53e-23 | 95.9 |
| Msa0506430 | MtrunA17_Chr3g0108791 | 51.515 | 99 | 16 | 1 | 24 | 90 | 335 | 433 | 4.65e-19 | 90.5 |
| Msa0506430 | MtrunA17_Chr2g0313591 | 24.290 | 634 | 344 | 24 | 56 | 614 | 566 | 1138 | 9.86e-18 | 88.2 |
| Msa0506430 | MtrunA17_Chr3g0105571 | 41.748 | 103 | 37 | 1 | 32 | 111 | 472 | 574 | 1.03e-11 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 129 sgRNAs with CRISPR-Local
Find 329 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGGGTGACATCTCTATTT+TGG | 0.087350 | 3_4:+52790042 | Msa0506430:CDS |
| ATATTAAACCTTCGTAATTT+AGG | 0.088643 | 3_4:-52790280 | None:intergenic |
| AAGAAGCCATCTTCCATTTC+TGG | 0.146104 | 3_4:+52791063 | Msa0506430:CDS |
| CATCATCAATTATTTGAAAT+AGG | 0.213893 | 3_4:-52790780 | None:intergenic |
| TCTCTATGATGATGTCAATT+TGG | 0.217577 | 3_4:+52790024 | Msa0506430:CDS |
| TATTAAACCTTCGTAATTTA+GGG | 0.231951 | 3_4:-52790279 | None:intergenic |
| GAGAAATTGGAATACATAAT+TGG | 0.234399 | 3_4:+52791996 | Msa0506430:CDS |
| CTTGGAACCATCAAGCTTAA+AGG | 0.250236 | 3_4:-52789815 | None:intergenic |
| TGTTGAAGATTGTGAGAAAT+TGG | 0.266106 | 3_4:+52791983 | Msa0506430:CDS |
| GCTCGAAGGAATGGATAATT+TGG | 0.268067 | 3_4:+52790600 | Msa0506430:CDS |
| ATAACACTGGTGGCAATAAC+TGG | 0.283750 | 3_4:+52791925 | Msa0506430:CDS |
| CACATTGTACGATTACATTC+TGG | 0.285680 | 3_4:-52791030 | None:intergenic |
| TAAAACCCCATTGGTTTCTA+AGG | 0.308199 | 3_4:+52791185 | Msa0506430:CDS |
| ATTCATATTGCCTTAACATA+TGG | 0.309524 | 3_4:+52791715 | Msa0506430:CDS |
| AATGGAAGATGGCTTCTTAA+TGG | 0.310575 | 3_4:-52791058 | None:intergenic |
| TCTTTAGATTGAATAGGTTT+AGG | 0.327430 | 3_4:-52790723 | None:intergenic |
| CTCTATGATGATGTCAATTT+GGG | 0.328537 | 3_4:+52790025 | Msa0506430:CDS |
| ATCAGTATTTATCCTATCTA+TGG | 0.330231 | 3_4:+52791821 | Msa0506430:CDS |
| ATCATCAATTATTTGAAATA+GGG | 0.333527 | 3_4:-52790779 | None:intergenic |
| GATAAGCTGAAATACATATT+TGG | 0.333653 | 3_4:+52790937 | Msa0506430:CDS |
| AATGACTCCAACAACATTCT+TGG | 0.347186 | 3_4:-52791846 | None:intergenic |
| TGAGAACTATTAACTAGAAA+TGG | 0.350719 | 3_4:+52787478 | Msa0506430:exon |
| GCTTGGTTCCCTCAAAGAAT+TGG | 0.352212 | 3_4:+52790972 | Msa0506430:CDS |
| CAAGTGTTTCAAGGCTTTGC+AGG | 0.353957 | 3_4:-52790069 | None:intergenic |
| TCGAGCATTTGCTGGAAATA+AGG | 0.360823 | 3_4:+52786586 | Msa0506430:five_prime_UTR |
| CAATATATATTGCATTTGAT+TGG | 0.371765 | 3_4:-52791117 | None:intergenic |
| AGAAGGAAGGTCTCCAATAC+TGG | 0.373565 | 3_4:-52792068 | None:intergenic |
| TCAACCGCATGACAATTTAA+TGG | 0.383828 | 3_4:+52791209 | Msa0506430:CDS |
| TTCTTAATAATAAGAACTTC+CGG | 0.387870 | 3_4:-52790832 | None:intergenic |
| AAATGTTGTGTGATATTGTT+TGG | 0.390087 | 3_4:-52792123 | None:intergenic |
| TCATCTTCATCTTCCAGTAT+TGG | 0.391900 | 3_4:+52792055 | Msa0506430:CDS |
| CATACGGCTCGAGCATTTGC+TGG | 0.399249 | 3_4:+52786578 | Msa0506430:five_prime_UTR |
| GATCGAAATCAAGTGTTTCA+AGG | 0.404545 | 3_4:-52790078 | None:intergenic |
| GTCTGCTGCAGAACTTGAAT+TGG | 0.412359 | 3_4:+52787378 | Msa0506430:five_prime_UTR |
| TTCATATTGCCTTAACATAT+GGG | 0.412525 | 3_4:+52791716 | Msa0506430:CDS |
| GGAAGTACAAATTCAAGTTC+TGG | 0.412597 | 3_4:-52790859 | None:intergenic |
| ACACACTCTTTAGATTGAAT+AGG | 0.414018 | 3_4:-52790729 | None:intergenic |
| TGACTCAATGTTTCAGAAAC+CGG | 0.414190 | 3_4:+52790813 | Msa0506430:CDS |
| TGATCCATGGGAACAATCTC+AGG | 0.417462 | 3_4:-52790463 | None:intergenic |
| CTCGGAAGCATCTCCAGAAA+TGG | 0.423130 | 3_4:-52791076 | None:intergenic |
| CATCCTTCAATCACTTCAAA+AGG | 0.425995 | 3_4:-52790193 | None:intergenic |
| ACATTGTACGATTACATTCT+GGG | 0.428638 | 3_4:-52791029 | None:intergenic |
| GGGAAAATGTCGATGAAAAT+CGG | 0.429008 | 3_4:-52791009 | None:intergenic |
| GGGAACCAAGCTGGACATCT+TGG | 0.431133 | 3_4:-52790960 | None:intergenic |
| TTCAAATAATTGATGATGGC+AGG | 0.434513 | 3_4:+52790785 | Msa0506430:CDS |
| CAATCTAAAGAGTGTGTCAT+TGG | 0.437821 | 3_4:+52790735 | Msa0506430:CDS |
| CTTAAAGGAAAACACATCCT+TGG | 0.439374 | 3_4:-52789800 | None:intergenic |
| ACTTGAGTGTTGTTTCAGAT+AGG | 0.440264 | 3_4:-52790375 | None:intergenic |
| TCTAATTGTCACTGTGCATA+AGG | 0.440751 | 3_4:+52789846 | Msa0506430:CDS |
| TGCTGCCCGTCTTCCGCCTA+TGG | 0.442093 | 3_4:+52787541 | Msa0506430:CDS |
| ACATTCTTGGAGCCATAGAT+AGG | 0.442502 | 3_4:-52791833 | None:intergenic |
| ATCAAAAGTCTTCTCGAAGT+TGG | 0.442702 | 3_4:+52790567 | Msa0506430:CDS |
| CACCAAGCTCCAATTCTTTG+AGG | 0.442781 | 3_4:-52790981 | None:intergenic |
| CCACTGCCGGCTACTCAGAT+TGG | 0.446607 | 3_4:+52786447 | Msa0506430:five_prime_UTR |
| CAAATGTTTACAATCCTCAA+TGG | 0.451969 | 3_4:-52790680 | None:intergenic |
| TTAAAGGAAAACACATCCTT+GGG | 0.454777 | 3_4:-52789799 | None:intergenic |
| GAGCACGTTCCCATATGTTA+AGG | 0.459154 | 3_4:-52791725 | None:intergenic |
| GGACACATGCTGACTAAACT+TGG | 0.462778 | 3_4:-52792101 | None:intergenic |
| GACAATTAGAATCTCAAGCT+TGG | 0.466326 | 3_4:-52789833 | None:intergenic |
| GTTGATCCTTAGAAACCAAT+GGG | 0.471629 | 3_4:-52791191 | None:intergenic |
| ATCACACCTTTCTATTGTGA+TGG | 0.472243 | 3_4:-52790917 | None:intergenic |
| ATCATTCATACCTTGATCCA+TGG | 0.475379 | 3_4:-52790476 | None:intergenic |
| TATGGCTCCAAGAATGTTGT+TGG | 0.476585 | 3_4:+52791839 | Msa0506430:CDS |
| AATTTGGAAGAATTGTTCAA+TGG | 0.477375 | 3_4:+52790616 | Msa0506430:CDS |
| ATTCTTTGAGGGAACCAAGC+TGG | 0.481173 | 3_4:-52790969 | None:intergenic |
| AATGTTGTGTGATATTGTTT+GGG | 0.481715 | 3_4:-52792122 | None:intergenic |
| CTATTTCAAATAATTGATGA+TGG | 0.488781 | 3_4:+52790781 | Msa0506430:CDS |
| AACTTGAACTCAATAACTGC+GGG | 0.494409 | 3_4:+52792159 | Msa0506430:CDS |
| TTGAGTTCAAGTTGTTTCAA+AGG | 0.496319 | 3_4:-52792149 | None:intergenic |
| AGATCATGAGCTTTGAGAAA+CGG | 0.502859 | 3_4:-52790880 | None:intergenic |
| ATAGCTAATTGTCATGATCA+TGG | 0.504506 | 3_4:-52792932 | None:intergenic |
| ATATTGCACAAGATATATGA+TGG | 0.504816 | 3_4:-52791762 | None:intergenic |
| CTTGAAGAGTTGTATTTCAA+AGG | 0.506154 | 3_4:+52790223 | Msa0506430:CDS |
| TAACACTGGTGGCAATAACT+GGG | 0.510956 | 3_4:+52791926 | Msa0506430:CDS |
| CTGCATGTTGGAGAAGGATC+AGG | 0.511048 | 3_4:+52786546 | Msa0506430:five_prime_UTR |
| TCCCTCAAAGAATTGGAGCT+TGG | 0.511317 | 3_4:+52790979 | Msa0506430:CDS |
| ACCAAGCTCCAATTCTTTGA+GGG | 0.513623 | 3_4:-52790980 | None:intergenic |
| ACTAGAAATGGAAAATGAGT+TGG | 0.514544 | 3_4:+52787490 | Msa0506430:exon |
| TCCAACATGCAGTAGCTAGC+AGG | 0.521828 | 3_4:-52786535 | None:intergenic |
| TAAATTGTTCAGAGAGTCAA+AGG | 0.524252 | 3_4:-52790647 | None:intergenic |
| CCAATCTGAGTAGCCGGCAG+TGG | 0.526494 | 3_4:-52786447 | None:intergenic |
| TTTAGAGAAGCTGTCCATTG+AGG | 0.526790 | 3_4:+52790666 | Msa0506430:CDS |
| GAGATTGTTCCCATGGATCA+AGG | 0.526817 | 3_4:+52790466 | Msa0506430:CDS |
| TAAAATCCATCACAATAGAA+AGG | 0.527176 | 3_4:+52790911 | Msa0506430:CDS |
| TGTACTAAAGCTCGAAGGAA+TGG | 0.530127 | 3_4:+52790591 | Msa0506430:CDS |
| AGTTCAAGTTGTTTCAAAGG+TGG | 0.534602 | 3_4:-52792146 | None:intergenic |
| GATTACCATAGGCGGAAGAC+GGG | 0.537318 | 3_4:-52787546 | None:intergenic |
| TTCAGAGAGTCAAAGGAAAG+AGG | 0.538200 | 3_4:-52790640 | None:intergenic |
| TTTGGCCAAGATGTCCAGCT+TGG | 0.543248 | 3_4:+52790955 | Msa0506430:CDS |
| TGAGTATCAATGACCACTGC+CGG | 0.547609 | 3_4:+52786434 | Msa0506430:five_prime_UTR |
| AACTTGGCAGATTACGAAGA+AGG | 0.554641 | 3_4:-52792085 | None:intergenic |
| CTAAAGAGTGTGTCATTGGA+AGG | 0.558727 | 3_4:+52790739 | Msa0506430:CDS |
| CATACCTGAGATTGTTCCCA+TGG | 0.564666 | 3_4:+52790459 | Msa0506430:CDS |
| CACAAGTACTAAAACCCCAT+TGG | 0.566221 | 3_4:+52791176 | Msa0506430:CDS |
| TGAACCGTTGTAAAATTGCA+AGG | 0.567908 | 3_4:+52790164 | Msa0506430:CDS |
| TAGCTACTGCATGTTGGAGA+AGG | 0.572143 | 3_4:+52786540 | Msa0506430:five_prime_UTR |
| GCATCTCCAGAAATGGAAGA+TGG | 0.574895 | 3_4:-52791069 | None:intergenic |
| CTTAGACTAAGAAGAATCGT+GGG | 0.575990 | 3_4:+52790421 | Msa0506430:CDS |
| GAACTCAATAACTGCGGGGA+CGG | 0.577347 | 3_4:+52792164 | Msa0506430:CDS |
| AGATTACCATAGGCGGAAGA+CGG | 0.579389 | 3_4:-52787547 | None:intergenic |
| TCCTGCTAGCTACTGCATGT+TGG | 0.579422 | 3_4:+52786534 | Msa0506430:five_prime_UTR |
| CGTGAAAACACTCAAGTGAA+AGG | 0.579917 | 3_4:+52792909 | Msa0506430:CDS |
| TCATTCATACCTTGATCCAT+GGG | 0.579986 | 3_4:-52790475 | None:intergenic |
| GAAATAGGGAGATCAACATC+GGG | 0.581715 | 3_4:-52790765 | None:intergenic |
| GGTTGATCCTTAGAAACCAA+TGG | 0.583204 | 3_4:-52791192 | None:intergenic |
| AGCAGGATCTCATTGTCTGA+TGG | 0.586534 | 3_4:-52786518 | None:intergenic |
| TAACTTTCCCTAAATTACGA+AGG | 0.587729 | 3_4:+52790272 | Msa0506430:CDS |
| AAATGCAATATATATTGTTG+TGG | 0.589892 | 3_4:+52791123 | Msa0506430:CDS |
| GATCAGGAGAATTGTTCATA+CGG | 0.591337 | 3_4:+52786562 | Msa0506430:five_prime_UTR |
| TGATGAATATTCGAGTTCAG+TGG | 0.591885 | 3_4:+52790303 | Msa0506430:CDS |
| AAACACATTATAATAGACAC+TGG | 0.599427 | 3_4:+52791894 | Msa0506430:CDS |
| TGAAATAGGGAGATCAACAT+CGG | 0.604053 | 3_4:-52790766 | None:intergenic |
| CGGGGACGGTAAAATCATCA+AGG | 0.607706 | 3_4:+52792178 | Msa0506430:CDS |
| TCTTAGACTAAGAAGAATCG+TGG | 0.616955 | 3_4:+52790420 | Msa0506430:CDS |
| GTTACCATTAAATTGTCATG+CGG | 0.631638 | 3_4:-52791213 | None:intergenic |
| TGGCAGATTACGAAGAAGGA+AGG | 0.633893 | 3_4:-52792081 | None:intergenic |
| GAGTATGCTTACTGTCAATG+AGG | 0.635355 | 3_4:-52790540 | None:intergenic |
| GTATTGTATGCAAGAAGCAG+AGG | 0.638565 | 3_4:+52790396 | Msa0506430:CDS |
| CAACTTGAACTCAATAACTG+CGG | 0.654909 | 3_4:+52792158 | Msa0506430:CDS |
| CTAGATTAGATTACCATAGG+CGG | 0.654927 | 3_4:-52787554 | None:intergenic |
| TTGGTTGTACTAAAGCTCGA+AGG | 0.662094 | 3_4:+52790586 | Msa0506430:CDS |
| TTAGACTAAGAAGAATCGTG+GGG | 0.669844 | 3_4:+52790422 | Msa0506430:CDS |
| GATGAAGATGAATCTGAGTG+TGG | 0.673759 | 3_4:-52792043 | None:intergenic |
| ACTGGAGATCACGATAACAC+TGG | 0.682397 | 3_4:+52791912 | Msa0506430:CDS |
| AACACTGGTGGCAATAACTG+GGG | 0.693163 | 3_4:+52791927 | Msa0506430:CDS |
| GGAGATCACGATAACACTGG+TGG | 0.699321 | 3_4:+52791915 | Msa0506430:CDS |
| ACTTGAACTCAATAACTGCG+GGG | 0.719943 | 3_4:+52792160 | Msa0506430:CDS |
| TAGACTAAGAAGAATCGTGG+GGG | 0.732887 | 3_4:+52790423 | Msa0506430:CDS |
| TTGATCCTTAGAAACCAATG+GGG | 0.735826 | 3_4:-52791190 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATCACATAAATTATTATT+AGG | + | chr3_4:52786798-52786817 | Msa0506430:intron | 10.0% |
| !! | AATCACATAAATTATTATTA+GGG | + | chr3_4:52786799-52786818 | Msa0506430:intron | 10.0% |
| !! | ATAAAAGTTCAAATAATTTA+AGG | + | chr3_4:52787143-52787162 | Msa0506430:intron | 10.0% |
| !!! | TTTATTTTTTATTTTTGTGT+AGG | - | chr3_4:52789002-52789021 | None:intergenic | 10.0% |
| !! | AAAAAAAAGTAGAAAATTAT+TGG | - | chr3_4:52789483-52789502 | None:intergenic | 10.0% |
| !!! | TTTTAAAAAAAACTAAAGAA+CGG | - | chr3_4:52791462-52791481 | None:intergenic | 10.0% |
| !!! | ATTAATGTACATTTTTTATT+TGG | + | chr3_4:52791626-52791645 | Msa0506430:intron | 10.0% |
| !!! | TTAATGTACATTTTTTATTT+GGG | + | chr3_4:52791627-52791646 | Msa0506430:intron | 10.0% |
| !!! | ATTTTTTTTATGTTTTTTAC+AGG | - | chr3_4:52792421-52792440 | None:intergenic | 10.0% |
| !! | TATAATTTACTAAAAAAAGT+AGG | + | chr3_4:52792718-52792737 | Msa0506430:intron | 10.0% |
| !! | ATAATTTACTAAAAAAAGTA+GGG | + | chr3_4:52792719-52792738 | Msa0506430:intron | 10.0% |
| !!! | ATTTTTTCTAAAATCTATTA+TGG | - | chr3_4:52792761-52792780 | None:intergenic | 10.0% |
| !!! | TAATAGATTTTAGAAAAAAT+AGG | + | chr3_4:52792761-52792780 | Msa0506430:intron | 10.0% |
| !! | AAAATTGTTGAGAAAATATT+TGG | - | chr3_4:52787273-52787292 | None:intergenic | 15.0% |
| !!! | ATTATGTTTTCTAAAATTGT+TGG | + | chr3_4:52787682-52787701 | Msa0506430:intron | 15.0% |
| !! | TAATTTCAAGCATTAAAAAA+AGG | + | chr3_4:52788197-52788216 | Msa0506430:intron | 15.0% |
| !! | AATTTCAAGCATTAAAAAAA+GGG | + | chr3_4:52788198-52788217 | Msa0506430:intron | 15.0% |
| !! | ACAAAATAATGTATATAGAT+AGG | - | chr3_4:52788382-52788401 | None:intergenic | 15.0% |
| !! | AATAACATTTACAAAATTGT+TGG | - | chr3_4:52788452-52788471 | None:intergenic | 15.0% |
| !! | TCTATTGAAATTTATTTAGA+TGG | + | chr3_4:52789117-52789136 | Msa0506430:intron | 15.0% |
| !!! | CTCATTTTTTGAAAATATTA+CGG | + | chr3_4:52789906-52789925 | Msa0506430:intron | 15.0% |
| !!! | TCATTTTTTGAAAATATTAC+GGG | + | chr3_4:52789907-52789926 | Msa0506430:intron | 15.0% |
| !!! | ATCATCAATTATTTGAAATA+GGG | - | chr3_4:52790782-52790801 | None:intergenic | 15.0% |
| !!! | GTTTAACTTCTATTTTTATT+TGG | + | chr3_4:52791665-52791684 | Msa0506430:intron | 15.0% |
| !! | TAACAAAGATATACAAAATA+GGG | - | chr3_4:52792207-52792226 | None:intergenic | 15.0% |
| !! | ATAACAAAGATATACAAAAT+AGG | - | chr3_4:52792208-52792227 | None:intergenic | 15.0% |
| !! | TTACAAAATTATCCTATAAA+CGG | - | chr3_4:52792487-52792506 | None:intergenic | 15.0% |
| !!! | TTTAAACAAGTACATTTTTT+AGG | + | chr3_4:52792590-52792609 | Msa0506430:intron | 15.0% |
| !!! | TTAAACAAGTACATTTTTTA+GGG | + | chr3_4:52792591-52792610 | Msa0506430:intron | 15.0% |
| !! | AATTACTCAAGTGTTATAAA+AGG | + | chr3_4:52786756-52786775 | Msa0506430:intron | 20.0% |
| !! | ATTACTCAAGTGTTATAAAA+GGG | + | chr3_4:52786757-52786776 | Msa0506430:intron | 20.0% |
| !! | CTCAAAAACTTCATAATAAA+TGG | - | chr3_4:52787462-52787481 | None:intergenic | 20.0% |
| !!! | AATTTCTTAAGAGTATTACA+AGG | + | chr3_4:52787896-52787915 | Msa0506430:intron | 20.0% |
| !!! | ATTTCTTAAGAGTATTACAA+GGG | + | chr3_4:52787897-52787916 | Msa0506430:intron | 20.0% |
| !!! | TTAAGAAAAGTTTAAAACTC+AGG | - | chr3_4:52787935-52787954 | None:intergenic | 20.0% |
| !! | ATATATAGATAGACTATGTT+TGG | - | chr3_4:52788080-52788099 | None:intergenic | 20.0% |
| !!! | TTTTTAATGCTTGAAATTAG+AGG | - | chr3_4:52788196-52788215 | None:intergenic | 20.0% |
| !! | ATTTCAAGCATTAAAAAAAG+GGG | + | chr3_4:52788199-52788218 | Msa0506430:intron | 20.0% |
| !! | ATTAACTAATCCTTTCATAT+TGG | - | chr3_4:52788327-52788346 | None:intergenic | 20.0% |
| !!! | TATGAAAGGATTAGTTAATA+TGG | + | chr3_4:52788328-52788347 | Msa0506430:intron | 20.0% |
| !! | TTGTAAATGTTATTAGTTAC+AGG | + | chr3_4:52788398-52788417 | Msa0506430:intron | 20.0% |
| !! | AAGATTCAATCTAGATAATT+AGG | - | chr3_4:52788526-52788545 | None:intergenic | 20.0% |
| !!! | AATTATGTTAGCTTTTGTAA+TGG | + | chr3_4:52788553-52788572 | Msa0506430:intron | 20.0% |
| !! | AACTATATAAGAAAGATGTA+TGG | - | chr3_4:52788680-52788699 | None:intergenic | 20.0% |
| !!! | ATCATTTTAACATGTTTTGT+TGG | - | chr3_4:52788807-52788826 | None:intergenic | 20.0% |
| !! | AAAATAAAATGGCTGATAAA+TGG | - | chr3_4:52789060-52789079 | None:intergenic | 20.0% |
| !! | GTGTGTATTGAAAAATAAAA+TGG | - | chr3_4:52789071-52789090 | None:intergenic | 20.0% |
| !! | AATTTCAATAGATCAAAGTT+AGG | - | chr3_4:52789109-52789128 | None:intergenic | 20.0% |
| !! | ATTAAGTAATCAATGTTTCA+TGG | - | chr3_4:52789416-52789435 | None:intergenic | 20.0% |
| !!! | CAACCATTTTATTTTTCAAA+CGG | + | chr3_4:52789699-52789718 | Msa0506430:intron | 20.0% |
| !! | GTTGTATGATAAAAATCAAA+AGG | + | chr3_4:52789726-52789745 | Msa0506430:intron | 20.0% |
| !!! | TATTTTCAAAAAATGAGTTC+AGG | - | chr3_4:52789903-52789922 | None:intergenic | 20.0% |
| !!! | CATTTTTTGAAAATATTACG+GGG | + | chr3_4:52789908-52789927 | Msa0506430:intron | 20.0% |
| !!! | ATTTTTTGAAAATATTACGG+GGG | + | chr3_4:52789909-52789928 | Msa0506430:intron | 20.0% |
| !! | TATTAAACCTTCGTAATTTA+GGG | - | chr3_4:52790282-52790301 | None:intergenic | 20.0% |
| !! | ATATTAAACCTTCGTAATTT+AGG | - | chr3_4:52790283-52790302 | None:intergenic | 20.0% |
| !!! | CATCATCAATTATTTGAAAT+AGG | - | chr3_4:52790783-52790802 | None:intergenic | 20.0% |
| !! | CTATTTCAAATAATTGATGA+TGG | + | chr3_4:52790781-52790800 | Msa0506430:CDS | 20.0% |
| !! | TTCTTAATAATAAGAACTTC+CGG | - | chr3_4:52790835-52790854 | None:intergenic | 20.0% |
| !! | CAATATATATTGCATTTGAT+TGG | - | chr3_4:52791120-52791139 | None:intergenic | 20.0% |
| !! | AAATGCAATATATATTGTTG+TGG | + | chr3_4:52791123-52791142 | Msa0506430:CDS | 20.0% |
| !! | TATTGTTGTGGTAAAAAATA+TGG | + | chr3_4:52791135-52791154 | Msa0506430:CDS | 20.0% |
| !! | ATTGTTGTGGTAAAAAATAT+GGG | + | chr3_4:52791136-52791155 | Msa0506430:CDS | 20.0% |
| !! | ATATAGTATTATATGTGCAT+AGG | + | chr3_4:52791347-52791366 | Msa0506430:intron | 20.0% |
| !! | CTATATAATATAACATGAGA+GGG | - | chr3_4:52791413-52791432 | None:intergenic | 20.0% |
| !!! | ACTTCTATTTTTATTTGGAT+TGG | + | chr3_4:52791670-52791689 | Msa0506430:intron | 20.0% |
| !!! | CAATGACTTTTCTTAAATTT+GGG | - | chr3_4:52791965-52791984 | None:intergenic | 20.0% |
| !!! | ACAATGACTTTTCTTAAATT+TGG | - | chr3_4:52791966-52791985 | None:intergenic | 20.0% |
| !! | AAAAATAGAGAAACTTATGT+GGG | - | chr3_4:52792301-52792320 | None:intergenic | 20.0% |
| !! | AAAAGATGATTAAACATGTT+TGG | + | chr3_4:52792449-52792468 | Msa0506430:intron | 20.0% |
| !! | TTTGTAAGAATTGTAAAATG+CGG | + | chr3_4:52792500-52792519 | Msa0506430:intron | 20.0% |
| !! | ATGTCATTGTTTACTAAATA+TGG | - | chr3_4:52792659-52792678 | None:intergenic | 20.0% |
| !! | TAGAAAAAATAGGAGTAAAT+AGG | + | chr3_4:52792771-52792790 | Msa0506430:intron | 20.0% |
| !! | TTGTAACTTTCATCAAAAAT+AGG | + | chr3_4:52792813-52792832 | Msa0506430:intron | 20.0% |
| !! | TGTAACTTTCATCAAAAATA+GGG | + | chr3_4:52792814-52792833 | Msa0506430:intron | 20.0% |
| !! | TATTTACTCGAAAAAATAGT+GGG | + | chr3_4:52792878-52792897 | Msa0506430:intron | 20.0% |
| ! | TTACTCAAGTGTTATAAAAG+GGG | + | chr3_4:52786758-52786777 | Msa0506430:intron | 25.0% |
| ! | TATAAAAGGGGAAATAACAT+TGG | + | chr3_4:52786770-52786789 | Msa0506430:intron | 25.0% |
| ! | TGTTGACAAACACTTATTTA+AGG | + | chr3_4:52787055-52787074 | Msa0506430:intron | 25.0% |
| ! | GTTGACAAACACTTATTTAA+GGG | + | chr3_4:52787056-52787075 | Msa0506430:intron | 25.0% |
| ! | CAAATCTCTAAGCAAAAAAA+AGG | - | chr3_4:52787120-52787139 | None:intergenic | 25.0% |
| ! | TTGTTGAGAAAATATTTGGA+TGG | - | chr3_4:52787269-52787288 | None:intergenic | 25.0% |
| ! | ATTTAAGTGAAATAAGGCAA+TGG | - | chr3_4:52787321-52787340 | None:intergenic | 25.0% |
| ! | TGAGAACTATTAACTAGAAA+TGG | + | chr3_4:52787478-52787497 | Msa0506430:exon | 25.0% |
| ! | TATCTAGATTAGATTACCAT+AGG | - | chr3_4:52787560-52787579 | None:intergenic | 25.0% |
| ! | TATTATGTTTGCATGTAAGA+AGG | - | chr3_4:52787602-52787621 | None:intergenic | 25.0% |
| ! | CTGCTGTAGAAATATAATTA+TGG | - | chr3_4:52787729-52787748 | None:intergenic | 25.0% |
| !!! | TCATACTTTAAAACTTTCAG+TGG | + | chr3_4:52787862-52787881 | Msa0506430:intron | 25.0% |
| !!! | TATAAGAAATTTTTTGCTCC+TGG | + | chr3_4:52788097-52788116 | Msa0506430:intron | 25.0% |
| ! | GAAAGTAAAATTAATATGCC+AGG | - | chr3_4:52788118-52788137 | None:intergenic | 25.0% |
| !!! | TCAGGTTTTAAACTTTAGTT+TGG | - | chr3_4:52788140-52788159 | None:intergenic | 25.0% |
| ! | AGTTGAAAAACAGAAAATAG+AGG | + | chr3_4:52788590-52788609 | Msa0506430:intron | 25.0% |
| ! | AAAAACAGAAAATAGAGGAA+AGG | + | chr3_4:52788595-52788614 | Msa0506430:intron | 25.0% |
| ! | TATAAGAAAGATGTATGGAT+GGG | - | chr3_4:52788675-52788694 | None:intergenic | 25.0% |
| ! | ATATAAGAAAGATGTATGGA+TGG | - | chr3_4:52788676-52788695 | None:intergenic | 25.0% |
| ! | ATACGATATCAACTATGTAT+AGG | - | chr3_4:52788730-52788749 | None:intergenic | 25.0% |
| !! | CATCAAAGAAATTTGAAACA+GGG | - | chr3_4:52788915-52788934 | None:intergenic | 25.0% |
| !! | TCATCAAAGAAATTTGAAAC+AGG | - | chr3_4:52788916-52788935 | None:intergenic | 25.0% |
| !!! | TGTTTTTTAGGATTTTGACT+TGG | - | chr3_4:52789272-52789291 | None:intergenic | 25.0% |
| !!! | GACTGCTTATAATGTTTTTT+AGG | - | chr3_4:52789284-52789303 | None:intergenic | 25.0% |
| ! | TGTTAATGCTTGAAATTAGA+TGG | - | chr3_4:52789322-52789341 | None:intergenic | 25.0% |
| ! | TAACAAATGAGAAATAACAG+TGG | + | chr3_4:52789337-52789356 | Msa0506430:intron | 25.0% |
| ! | AGTAGAAAATTATTGGAGTT+TGG | - | chr3_4:52789476-52789495 | None:intergenic | 25.0% |
| !! | CACTTTCTTAGATTTTCTAT+TGG | + | chr3_4:52789509-52789528 | Msa0506430:intron | 25.0% |
| ! | TCACCGTTTGAAAAATAAAA+TGG | - | chr3_4:52789705-52789724 | None:intergenic | 25.0% |
| !! | TATTCCTTGCAATTTTACAA+CGG | - | chr3_4:52790171-52790190 | None:intergenic | 25.0% |
| ! | AATTTGGAAGAATTGTTCAA+TGG | + | chr3_4:52790616-52790635 | Msa0506430:CDS | 25.0% |
| ! | TCTTTAGATTGAATAGGTTT+AGG | - | chr3_4:52790726-52790745 | None:intergenic | 25.0% |
| ! | TAAAATCCATCACAATAGAA+AGG | + | chr3_4:52790911-52790930 | Msa0506430:CDS | 25.0% |
| ! | GATAAGCTGAAATACATATT+TGG | + | chr3_4:52790937-52790956 | Msa0506430:CDS | 25.0% |
| ! | GCTATATAATATAACATGAG+AGG | - | chr3_4:52791414-52791433 | None:intergenic | 25.0% |
| ! | TAATAGTAATCTTCAAGCAT+AGG | - | chr3_4:52791610-52791629 | None:intergenic | 25.0% |
| ! | ATTCATATTGCCTTAACATA+TGG | + | chr3_4:52791715-52791734 | Msa0506430:CDS | 25.0% |
| ! | TTCATATTGCCTTAACATAT+GGG | + | chr3_4:52791716-52791735 | Msa0506430:CDS | 25.0% |
| ! | ATATTGCACAAGATATATGA+TGG | - | chr3_4:52791765-52791784 | None:intergenic | 25.0% |
| ! | ATCAGTATTTATCCTATCTA+TGG | + | chr3_4:52791821-52791840 | Msa0506430:CDS | 25.0% |
| ! | AAACACATTATAATAGACAC+TGG | + | chr3_4:52791894-52791913 | Msa0506430:CDS | 25.0% |
| ! | GAGAAATTGGAATACATAAT+TGG | + | chr3_4:52791996-52792015 | Msa0506430:CDS | 25.0% |
| ! | AATGTTGTGTGATATTGTTT+GGG | - | chr3_4:52792125-52792144 | None:intergenic | 25.0% |
| ! | AAATGTTGTGTGATATTGTT+TGG | - | chr3_4:52792126-52792145 | None:intergenic | 25.0% |
| ! | AAAATAGAGAAACTTATGTG+GGG | - | chr3_4:52792300-52792319 | None:intergenic | 25.0% |
| ! | CAAAAATAGAGAAACTTATG+TGG | - | chr3_4:52792302-52792321 | None:intergenic | 25.0% |
| ! | CTTATGCTAAACAAAAATTG+TGG | + | chr3_4:52792367-52792386 | Msa0506430:intron | 25.0% |
| ! | TTTCATCATAAACCGTTTAT+AGG | + | chr3_4:52792472-52792491 | Msa0506430:intron | 25.0% |
| ! | AAAATGCGGTTTATTTATGA+TGG | + | chr3_4:52792514-52792533 | Msa0506430:intron | 25.0% |
| ! | AAATGCGGTTTATTTATGAT+GGG | + | chr3_4:52792515-52792534 | Msa0506430:intron | 25.0% |
| !! | ACCTCTTAAATTTTGTTCAA+AGG | + | chr3_4:52792626-52792645 | Msa0506430:intron | 25.0% |
| ! | ACCTTTGAACAAAATTTAAG+AGG | - | chr3_4:52792630-52792649 | None:intergenic | 25.0% |
| !! | TCTTAAATTTTGTTCAAAGG+TGG | + | chr3_4:52792629-52792648 | Msa0506430:intron | 25.0% |
| !! | CTTAAATTTTGTTCAAAGGT+GGG | + | chr3_4:52792630-52792649 | Msa0506430:intron | 25.0% |
| !!! | CACTATTTTTTCGAGTAAAT+AGG | - | chr3_4:52792879-52792898 | None:intergenic | 25.0% |
| ! | CTATTTACTCGAAAAAATAG+TGG | + | chr3_4:52792877-52792896 | Msa0506430:intron | 25.0% |
| GCTACAATGTTATGATTACA+TGG | - | chr3_4:52786690-52786709 | None:intergenic | 30.0% | |
| TTGAGAAAATATTTGGATGG+TGG | - | chr3_4:52787266-52787285 | None:intergenic | 30.0% | |
| TGTGCAGAACTTGAATATAA+AGG | + | chr3_4:52787294-52787313 | Msa0506430:intron | 30.0% | |
| !! | GCCTTATTTCACTTAAATGA+TGG | + | chr3_4:52787323-52787342 | Msa0506430:intron | 30.0% |
| GCCATCATTTAAGTGAAATA+AGG | - | chr3_4:52787327-52787346 | None:intergenic | 30.0% | |
| ACTAGAAATGGAAAATGAGT+TGG | + | chr3_4:52787490-52787509 | Msa0506430:exon | 30.0% | |
| GCAAATATGCAATAGTAAAG+TGG | - | chr3_4:52787629-52787648 | None:intergenic | 30.0% | |
| GCATCATCAAGATCATAATA+AGG | - | chr3_4:52787774-52787793 | None:intergenic | 30.0% | |
| !!! | CATTTTTGAGGATTTTGACT+TGG | - | chr3_4:52788172-52788191 | None:intergenic | 30.0% |
| ! | GAAATTAGAGGACATTTTTG+AGG | - | chr3_4:52788184-52788203 | None:intergenic | 30.0% |
| AAAAAAAGGGGAAATAACAG+TGG | + | chr3_4:52788211-52788230 | Msa0506430:intron | 30.0% | |
| ! | AACTCCAACAATTTTGTTAC+AGG | + | chr3_4:52788354-52788373 | Msa0506430:intron | 30.0% |
| AATACTTTGTTGCACAAGTA+AGG | - | chr3_4:52788783-52788802 | None:intergenic | 30.0% | |
| TAGTCAGTTAGTCAACATAT+TGG | + | chr3_4:52788882-52788901 | Msa0506430:intron | 30.0% | |
| ! | AATTTTTACTCCAGTCATGT+TGG | + | chr3_4:52789205-52789224 | Msa0506430:intron | 30.0% |
| AAAAGTAAAACCAACATGAC+TGG | - | chr3_4:52789218-52789237 | None:intergenic | 30.0% | |
| AAGTAATCAATGTTTCATGG+TGG | - | chr3_4:52789413-52789432 | None:intergenic | 30.0% | |
| AGTAGAATGAAGAACGAAAA+TGG | - | chr3_4:52789545-52789564 | None:intergenic | 30.0% | |
| TTAAAGGAAAACACATCCTT+GGG | - | chr3_4:52789802-52789821 | None:intergenic | 30.0% | |
| ! | TCTCTATGATGATGTCAATT+TGG | + | chr3_4:52790024-52790043 | Msa0506430:CDS | 30.0% |
| ! | CTCTATGATGATGTCAATTT+GGG | + | chr3_4:52790025-52790044 | Msa0506430:CDS | 30.0% |
| !!! | TCTAGTTTTGTGATTCTATG+AGG | - | chr3_4:52790124-52790143 | None:intergenic | 30.0% |
| !!! | AATCCTTTTGAAGTGATTGA+AGG | + | chr3_4:52790190-52790209 | Msa0506430:CDS | 30.0% |
| CTTGAAGAGTTGTATTTCAA+AGG | + | chr3_4:52790223-52790242 | Msa0506430:CDS | 30.0% | |
| TAACTTTCCCTAAATTACGA+AGG | + | chr3_4:52790272-52790291 | Msa0506430:CDS | 30.0% | |
| TAAATTGTTCAGAGAGTCAA+AGG | - | chr3_4:52790650-52790669 | None:intergenic | 30.0% | |
| CAAATGTTTACAATCCTCAA+TGG | - | chr3_4:52790683-52790702 | None:intergenic | 30.0% | |
| ACACACTCTTTAGATTGAAT+AGG | - | chr3_4:52790732-52790751 | None:intergenic | 30.0% | |
| !! | TTCAAATAATTGATGATGGC+AGG | + | chr3_4:52790785-52790804 | Msa0506430:CDS | 30.0% |
| ACATTGTACGATTACATTCT+GGG | - | chr3_4:52791032-52791051 | None:intergenic | 30.0% | |
| !!! | ATTGGTTTTGATTGTTCTTG+TGG | - | chr3_4:52791102-52791121 | None:intergenic | 30.0% |
| GTTACCATTAAATTGTCATG+CGG | - | chr3_4:52791216-52791235 | None:intergenic | 30.0% | |
| AGAAGAAATAGAAGGTAAGA+GGG | - | chr3_4:52791238-52791257 | None:intergenic | 30.0% | |
| AACATCACAGAAGAAATAGA+AGG | - | chr3_4:52791246-52791265 | None:intergenic | 30.0% | |
| AAATAGACGTATTCTTGTAC+CGG | + | chr3_4:52791480-52791499 | Msa0506430:intron | 30.0% | |
| TATCAATAGCTATGTTGCAT+AGG | - | chr3_4:52791537-52791556 | None:intergenic | 30.0% | |
| TGTTGAAGATTGTGAGAAAT+TGG | + | chr3_4:52791983-52792002 | Msa0506430:CDS | 30.0% | |
| !! | TTGAGTTCAAGTTGTTTCAA+AGG | - | chr3_4:52792152-52792171 | None:intergenic | 30.0% |
| AAATAGAGAAACTTATGTGG+GGG | - | chr3_4:52792299-52792318 | None:intergenic | 30.0% | |
| AATGCGGTTTATTTATGATG+GGG | + | chr3_4:52792516-52792535 | Msa0506430:intron | 30.0% | |
| ATCTATTATGGATCATCCAA+AGG | - | chr3_4:52792749-52792768 | None:intergenic | 30.0% | |
| GATGAAAGTTACAATTTCAG+AGG | - | chr3_4:52792807-52792826 | None:intergenic | 30.0% | |
| ACTAACGTTTGACAATTTCA+GGG | + | chr3_4:52792843-52792862 | Msa0506430:intron | 30.0% | |
| GATCAGGAGAATTGTTCATA+CGG | + | chr3_4:52786562-52786581 | Msa0506430:five_prime_UTR | 35.0% | |
| CTAGATTAGATTACCATAGG+CGG | - | chr3_4:52787557-52787576 | None:intergenic | 35.0% | |
| GAGTTGTTGCAATCACAAAA+CGG | + | chr3_4:52787748-52787767 | Msa0506430:intron | 35.0% | |
| ! | TCAACATTTGCTGAAACTTC+TGG | + | chr3_4:52787821-52787840 | Msa0506430:intron | 35.0% |
| ! | TGCTGAAACTTCTGGAAATA+AGG | + | chr3_4:52787829-52787848 | Msa0506430:intron | 35.0% |
| TTTAGAGAAACCAACTGGAA+TGG | + | chr3_4:52787960-52787979 | Msa0506430:intron | 35.0% | |
| !! | CGAGTTGGTTTCTCTTAAAA+TGG | - | chr3_4:52788040-52788059 | None:intergenic | 35.0% |
| CTATCATTATCAACTCGAGT+TGG | - | chr3_4:52788055-52788074 | None:intergenic | 35.0% | |
| CCTTTCATATTGGTACAGAT+AGG | - | chr3_4:52788317-52788336 | None:intergenic | 35.0% | |
| CCTATCTGTACCAATATGAA+AGG | + | chr3_4:52788314-52788333 | Msa0506430:intron | 35.0% | |
| GGATCCTGTAACAAAATTGT+TGG | - | chr3_4:52788361-52788380 | None:intergenic | 35.0% | |
| TTTGCCATATTGGTACAGAT+AGG | - | chr3_4:52788426-52788445 | None:intergenic | 35.0% | |
| ! | TTGTTGGAGTTTTGCCATAT+TGG | - | chr3_4:52788345-52788364 | None:intergenic | 35.0% |
| GAAAGGAAGTGAAAGAGAAA+GGG | + | chr3_4:52788612-52788631 | Msa0506430:intron | 35.0% | |
| AAAGGAAGTGAAAGAGAAAG+GGG | + | chr3_4:52788613-52788632 | Msa0506430:intron | 35.0% | |
| CAGTTAGTCAACATATTGGA+TGG | + | chr3_4:52788886-52788905 | Msa0506430:intron | 35.0% | |
| CAAAGCAGTTTATCCACATA+AGG | - | chr3_4:52789169-52789188 | None:intergenic | 35.0% | |
| !!! | TAGGATTTTGACTTGGAATC+AGG | - | chr3_4:52789265-52789284 | None:intergenic | 35.0% |
| CTTGAAATTAGATGGCTACT+TGG | - | chr3_4:52789314-52789333 | None:intergenic | 35.0% | |
| TAAGTTGCAACTATGCAACA+TGG | + | chr3_4:52789435-52789454 | Msa0506430:intron | 35.0% | |
| CTTAAAGGAAAACACATCCT+TGG | - | chr3_4:52789803-52789822 | None:intergenic | 35.0% | |
| ! | GTGTTTTCCTTTAAGCTTGA+TGG | + | chr3_4:52789808-52789827 | Msa0506430:CDS | 35.0% |
| GACAATTAGAATCTCAAGCT+TGG | - | chr3_4:52789836-52789855 | None:intergenic | 35.0% | |
| TCTAATTGTCACTGTGCATA+AGG | + | chr3_4:52789846-52789865 | Msa0506430:CDS | 35.0% | |
| ! | GGTAATGATAGATCAAGTTG+AGG | - | chr3_4:52789968-52789987 | None:intergenic | 35.0% |
| ! | TTTGGGTGACATCTCTATTT+TGG | + | chr3_4:52790042-52790061 | Msa0506430:CDS | 35.0% |
| ! | TTGGGTGACATCTCTATTTT+GGG | + | chr3_4:52790043-52790062 | Msa0506430:CDS | 35.0% |
| GATCGAAATCAAGTGTTTCA+AGG | - | chr3_4:52790081-52790100 | None:intergenic | 35.0% | |
| TGAACCGTTGTAAAATTGCA+AGG | + | chr3_4:52790164-52790183 | Msa0506430:CDS | 35.0% | |
| CATCCTTCAATCACTTCAAA+AGG | - | chr3_4:52790196-52790215 | None:intergenic | 35.0% | |
| ! | TGATGAATATTCGAGTTCAG+TGG | + | chr3_4:52790303-52790322 | Msa0506430:CDS | 35.0% |
| !! | ACTTGAGTGTTGTTTCAGAT+AGG | - | chr3_4:52790378-52790397 | None:intergenic | 35.0% |
| TCTTAGACTAAGAAGAATCG+TGG | + | chr3_4:52790420-52790439 | Msa0506430:CDS | 35.0% | |
| CTTAGACTAAGAAGAATCGT+GGG | + | chr3_4:52790421-52790440 | Msa0506430:CDS | 35.0% | |
| TTAGACTAAGAAGAATCGTG+GGG | + | chr3_4:52790422-52790441 | Msa0506430:CDS | 35.0% | |
| TCATTCATACCTTGATCCAT+GGG | - | chr3_4:52790478-52790497 | None:intergenic | 35.0% | |
| ATCATTCATACCTTGATCCA+TGG | - | chr3_4:52790479-52790498 | None:intergenic | 35.0% | |
| ATCAAAAGTCTTCTCGAAGT+TGG | + | chr3_4:52790567-52790586 | Msa0506430:CDS | 35.0% | |
| ! | CAATCTAAAGAGTGTGTCAT+TGG | + | chr3_4:52790735-52790754 | Msa0506430:CDS | 35.0% |
| TGAAATAGGGAGATCAACAT+CGG | - | chr3_4:52790769-52790788 | None:intergenic | 35.0% | |
| TGACTCAATGTTTCAGAAAC+CGG | + | chr3_4:52790813-52790832 | Msa0506430:CDS | 35.0% | |
| ! | GGAAGTACAAATTCAAGTTC+TGG | - | chr3_4:52790862-52790881 | None:intergenic | 35.0% |
| !! | AGATCATGAGCTTTGAGAAA+CGG | - | chr3_4:52790883-52790902 | None:intergenic | 35.0% |
| !!! | ATTGTGATGGATTTTAGAGC+TGG | - | chr3_4:52790907-52790926 | None:intergenic | 35.0% |
| ATCACACCTTTCTATTGTGA+TGG | - | chr3_4:52790920-52790939 | None:intergenic | 35.0% | |
| GGGAAAATGTCGATGAAAAT+CGG | - | chr3_4:52791012-52791031 | None:intergenic | 35.0% | |
| CACATTGTACGATTACATTC+TGG | - | chr3_4:52791033-52791052 | None:intergenic | 35.0% | |
| AATGGAAGATGGCTTCTTAA+TGG | - | chr3_4:52791061-52791080 | None:intergenic | 35.0% | |
| !! | TTTTGATTGTTCTTGTGGCT+CGG | - | chr3_4:52791097-52791116 | None:intergenic | 35.0% |
| AAAAATATGGGCACAGATTG+AGG | + | chr3_4:52791148-52791167 | Msa0506430:CDS | 35.0% | |
| !! | TAAAACCCCATTGGTTTCTA+AGG | + | chr3_4:52791185-52791204 | Msa0506430:CDS | 35.0% |
| TTGATCCTTAGAAACCAATG+GGG | - | chr3_4:52791193-52791212 | None:intergenic | 35.0% | |
| GTTGATCCTTAGAAACCAAT+GGG | - | chr3_4:52791194-52791213 | None:intergenic | 35.0% | |
| TCAACCGCATGACAATTTAA+TGG | + | chr3_4:52791209-52791228 | Msa0506430:CDS | 35.0% | |
| CAGAAGAAATAGAAGGTAAG+AGG | - | chr3_4:52791239-52791258 | None:intergenic | 35.0% | |
| TCACATGCTTCAGAGATTAA+TGG | - | chr3_4:52791294-52791313 | None:intergenic | 35.0% | |
| !!! | ATGTGCATAGGAGTTTTTTG+TGG | + | chr3_4:52791359-52791378 | Msa0506430:intron | 35.0% |
| ATAGCTATGTTGCATAGGTA+CGG | - | chr3_4:52791532-52791551 | None:intergenic | 35.0% | |
| AATGACTCCAACAACATTCT+TGG | - | chr3_4:52791849-52791868 | None:intergenic | 35.0% | |
| TCATCTTCATCTTCCAGTAT+TGG | + | chr3_4:52792055-52792074 | Msa0506430:CDS | 35.0% | |
| !! | AGTTCAAGTTGTTTCAAAGG+TGG | - | chr3_4:52792149-52792168 | None:intergenic | 35.0% |
| CAACTTGAACTCAATAACTG+CGG | + | chr3_4:52792158-52792177 | Msa0506430:CDS | 35.0% | |
| AACTTGAACTCAATAACTGC+GGG | + | chr3_4:52792159-52792178 | Msa0506430:CDS | 35.0% | |
| TATTATGGATCATCCAAAGG+TGG | - | chr3_4:52792746-52792765 | None:intergenic | 35.0% | |
| GACTAACGTTTGACAATTTC+AGG | + | chr3_4:52792842-52792861 | Msa0506430:intron | 35.0% | |
| CTAACGTTTGACAATTTCAG+GGG | + | chr3_4:52792844-52792863 | Msa0506430:intron | 35.0% | |
| TAACGTTTGACAATTTCAGG+GGG | + | chr3_4:52792845-52792864 | Msa0506430:intron | 35.0% | |
| ! | AGTTTTCCAATCTGAGTAGC+CGG | - | chr3_4:52786456-52786475 | None:intergenic | 40.0% |
| ! | TCGAGCATTTGCTGGAAATA+AGG | + | chr3_4:52786586-52786605 | Msa0506430:five_prime_UTR | 40.0% |
| CTACTGCATATTGCAGAAAC+AGG | + | chr3_4:52787346-52787365 | Msa0506430:intron | 40.0% | |
| TGATGCTAGCTACTGCATAT+TGG | + | chr3_4:52787788-52787807 | Msa0506430:intron | 40.0% | |
| GAGCATTTAGAGAAACCAAC+TGG | + | chr3_4:52787955-52787974 | Msa0506430:intron | 40.0% | |
| CGATTCTTATCCATTCCAGT+TGG | - | chr3_4:52787973-52787992 | None:intergenic | 40.0% | |
| GGATCCTATCTGTACCAATA+TGG | + | chr3_4:52788419-52788438 | Msa0506430:intron | 40.0% | |
| !!! | GTTAGCTTTTGTAATGGCAG+CGG | + | chr3_4:52788559-52788578 | Msa0506430:intron | 40.0% |
| GGAAAGGAAGTGAAAGAGAA+AGG | + | chr3_4:52788611-52788630 | Msa0506430:intron | 40.0% | |
| AGAAAGATGTATGGATGGGA+TGG | - | chr3_4:52788671-52788690 | None:intergenic | 40.0% | |
| GTGTTCTGCACAAGTTAAGT+TGG | - | chr3_4:52788761-52788780 | None:intergenic | 40.0% | |
| ! | CTGATGAAAAGTGTGTCATC+AGG | + | chr3_4:52789032-52789051 | Msa0506430:intron | 40.0% |
| ATCAAAAGGCAGTCGATGAA+AGG | + | chr3_4:52789740-52789759 | Msa0506430:intron | 40.0% | |
| TCAAAAGGCAGTCGATGAAA+GGG | + | chr3_4:52789741-52789760 | Msa0506430:intron | 40.0% | |
| CTTGGAACCATCAAGCTTAA+AGG | - | chr3_4:52789818-52789837 | None:intergenic | 40.0% | |
| TTCAACGACTGAATTGACTG+AGG | - | chr3_4:52789989-52790008 | None:intergenic | 40.0% | |
| TAGACTAAGAAGAATCGTGG+GGG | + | chr3_4:52790423-52790442 | Msa0506430:CDS | 40.0% | |
| GAGTATGCTTACTGTCAATG+AGG | - | chr3_4:52790543-52790562 | None:intergenic | 40.0% | |
| TTGGTTGTACTAAAGCTCGA+AGG | + | chr3_4:52790586-52790605 | Msa0506430:CDS | 40.0% | |
| TGTACTAAAGCTCGAAGGAA+TGG | + | chr3_4:52790591-52790610 | Msa0506430:CDS | 40.0% | |
| GCTCGAAGGAATGGATAATT+TGG | + | chr3_4:52790600-52790619 | Msa0506430:CDS | 40.0% | |
| TTCAGAGAGTCAAAGGAAAG+AGG | - | chr3_4:52790643-52790662 | None:intergenic | 40.0% | |
| TTTAGAGAAGCTGTCCATTG+AGG | + | chr3_4:52790666-52790685 | Msa0506430:CDS | 40.0% | |
| ! | CTAAAGAGTGTGTCATTGGA+AGG | + | chr3_4:52790739-52790758 | Msa0506430:CDS | 40.0% |
| GAAATAGGGAGATCAACATC+GGG | - | chr3_4:52790768-52790787 | None:intergenic | 40.0% | |
| ACCAAGCTCCAATTCTTTGA+GGG | - | chr3_4:52790983-52791002 | None:intergenic | 40.0% | |
| AAGAAGCCATCTTCCATTTC+TGG | + | chr3_4:52791063-52791082 | Msa0506430:CDS | 40.0% | |
| !! | CAATGGGGTTTTAGTACTTG+TGG | - | chr3_4:52791178-52791197 | None:intergenic | 40.0% |
| CACAAGTACTAAAACCCCAT+TGG | + | chr3_4:52791176-52791195 | Msa0506430:CDS | 40.0% | |
| GGTTGATCCTTAGAAACCAA+TGG | - | chr3_4:52791195-52791214 | None:intergenic | 40.0% | |
| TAGCTATGTTGCATAGGTAC+GGG | - | chr3_4:52791531-52791550 | None:intergenic | 40.0% | |
| ACATTCTTGGAGCCATAGAT+AGG | - | chr3_4:52791836-52791855 | None:intergenic | 40.0% | |
| TATGGCTCCAAGAATGTTGT+TGG | + | chr3_4:52791839-52791858 | Msa0506430:CDS | 40.0% | |
| ATAACACTGGTGGCAATAAC+TGG | + | chr3_4:52791925-52791944 | Msa0506430:CDS | 40.0% | |
| TAACACTGGTGGCAATAACT+GGG | + | chr3_4:52791926-52791945 | Msa0506430:CDS | 40.0% | |
| GATGAAGATGAATCTGAGTG+TGG | - | chr3_4:52792046-52792065 | None:intergenic | 40.0% | |
| AACTTGGCAGATTACGAAGA+AGG | - | chr3_4:52792088-52792107 | None:intergenic | 40.0% | |
| ACTTGAACTCAATAACTGCG+GGG | + | chr3_4:52792160-52792179 | Msa0506430:CDS | 40.0% | |
| AAAAAAGTAGGGTCCACCTT+TGG | + | chr3_4:52792730-52792749 | Msa0506430:intron | 40.0% | |
| AACGTTTGACAATTTCAGGG+GGG | + | chr3_4:52792846-52792865 | Msa0506430:intron | 40.0% | |
| CGTGAAAACACTCAAGTGAA+AGG | + | chr3_4:52792909-52792928 | Msa0506430:CDS | 40.0% | |
| TGAGTATCAATGACCACTGC+CGG | + | chr3_4:52786434-52786453 | Msa0506430:five_prime_UTR | 45.0% | |
| AGCAGGATCTCATTGTCTGA+TGG | - | chr3_4:52786521-52786540 | None:intergenic | 45.0% | |
| TAGCTACTGCATGTTGGAGA+AGG | + | chr3_4:52786540-52786559 | Msa0506430:five_prime_UTR | 45.0% | |
| GTCTGCTGCAGAACTTGAAT+TGG | + | chr3_4:52787378-52787397 | Msa0506430:five_prime_UTR | 45.0% | |
| AGATTACCATAGGCGGAAGA+CGG | - | chr3_4:52787550-52787569 | None:intergenic | 45.0% | |
| !!! | GAGGATTTTGACTTGGAAGC+AGG | - | chr3_4:52788165-52788184 | None:intergenic | 45.0% |
| ! | GGCGAGTTTTCTGACTGATT+TGG | + | chr3_4:52789138-52789157 | Msa0506430:intron | 45.0% |
| ! | TGATTTGGCGAAGCCTTATG+TGG | + | chr3_4:52789153-52789172 | Msa0506430:intron | 45.0% |
| ! | TGACTTGGAATCAGGCTTCA+AGG | - | chr3_4:52789257-52789276 | None:intergenic | 45.0% |
| GTTATGTGAATGCAAGCCCA+AGG | + | chr3_4:52789783-52789802 | Msa0506430:intron | 45.0% | |
| CAAGTGTTTCAAGGCTTTGC+AGG | - | chr3_4:52790072-52790091 | None:intergenic | 45.0% | |
| TAAGAAGAATCGTGGGGGAA+TGG | + | chr3_4:52790428-52790447 | Msa0506430:CDS | 45.0% | |
| CATACCTGAGATTGTTCCCA+TGG | + | chr3_4:52790459-52790478 | Msa0506430:CDS | 45.0% | |
| TGATCCATGGGAACAATCTC+AGG | - | chr3_4:52790466-52790485 | None:intergenic | 45.0% | |
| GAGATTGTTCCCATGGATCA+AGG | + | chr3_4:52790466-52790485 | Msa0506430:CDS | 45.0% | |
| ! | ATTCTTTGAGGGAACCAAGC+TGG | - | chr3_4:52790972-52790991 | None:intergenic | 45.0% |
| GCTTGGTTCCCTCAAAGAAT+TGG | + | chr3_4:52790972-52790991 | Msa0506430:CDS | 45.0% | |
| TCCCTCAAAGAATTGGAGCT+TGG | + | chr3_4:52790979-52790998 | Msa0506430:CDS | 45.0% | |
| CACCAAGCTCCAATTCTTTG+AGG | - | chr3_4:52790984-52791003 | None:intergenic | 45.0% | |
| GCATCTCCAGAAATGGAAGA+TGG | - | chr3_4:52791072-52791091 | None:intergenic | 45.0% | |
| TACCGGTACTCGTATCATAC+TGG | + | chr3_4:52791497-52791516 | Msa0506430:intron | 45.0% | |
| ACCGGTACTCGTATCATACT+GGG | + | chr3_4:52791498-52791517 | Msa0506430:intron | 45.0% | |
| ACCCAGTATGATACGAGTAC+CGG | - | chr3_4:52791502-52791521 | None:intergenic | 45.0% | |
| GAGCACGTTCCCATATGTTA+AGG | - | chr3_4:52791728-52791747 | None:intergenic | 45.0% | |
| ACTGGAGATCACGATAACAC+TGG | + | chr3_4:52791912-52791931 | Msa0506430:CDS | 45.0% | |
| AACACTGGTGGCAATAACTG+GGG | + | chr3_4:52791927-52791946 | Msa0506430:CDS | 45.0% | |
| AGAAGGAAGGTCTCCAATAC+TGG | - | chr3_4:52792071-52792090 | None:intergenic | 45.0% | |
| TGGCAGATTACGAAGAAGGA+AGG | - | chr3_4:52792084-52792103 | None:intergenic | 45.0% | |
| ! | GGACACATGCTGACTAAACT+TGG | - | chr3_4:52792104-52792123 | None:intergenic | 45.0% |
| ACGTTTGACAATTTCAGGGG+GGG | + | chr3_4:52792847-52792866 | Msa0506430:intron | 45.0% | |
| TCCTGCTAGCTACTGCATGT+TGG | + | chr3_4:52786534-52786553 | Msa0506430:five_prime_UTR | 50.0% | |
| TCCAACATGCAGTAGCTAGC+AGG | - | chr3_4:52786538-52786557 | None:intergenic | 50.0% | |
| CTGCATGTTGGAGAAGGATC+AGG | + | chr3_4:52786546-52786565 | Msa0506430:five_prime_UTR | 50.0% | |
| GATTACCATAGGCGGAAGAC+GGG | - | chr3_4:52787549-52787568 | None:intergenic | 50.0% | |
| !! | TTGACTTGGAAGCAGGCTTC+AGG | - | chr3_4:52788158-52788177 | None:intergenic | 50.0% |
| GCAGCAAACAAAAGCTGCAG+AGG | - | chr3_4:52788476-52788495 | None:intergenic | 50.0% | |
| TTTGGCCAAGATGTCCAGCT+TGG | + | chr3_4:52790955-52790974 | Msa0506430:CDS | 50.0% | |
| !! | CTCGGAAGCATCTCCAGAAA+TGG | - | chr3_4:52791079-52791098 | None:intergenic | 50.0% |
| GGAGATCACGATAACACTGG+TGG | + | chr3_4:52791915-52791934 | Msa0506430:CDS | 50.0% | |
| GAACTCAATAACTGCGGGGA+CGG | + | chr3_4:52792164-52792183 | Msa0506430:CDS | 50.0% | |
| CGGGGACGGTAAAATCATCA+AGG | + | chr3_4:52792178-52792197 | Msa0506430:CDS | 50.0% | |
| CATACGGCTCGAGCATTTGC+TGG | + | chr3_4:52786578-52786597 | Msa0506430:five_prime_UTR | 55.0% | |
| GGGAACCAAGCTGGACATCT+TGG | - | chr3_4:52790963-52790982 | None:intergenic | 55.0% | |
| CCAATCTGAGTAGCCGGCAG+TGG | - | chr3_4:52786450-52786469 | None:intergenic | 60.0% | |
| ! | CCACTGCCGGCTACTCAGAT+TGG | + | chr3_4:52786447-52786466 | Msa0506430:five_prime_UTR | 60.0% |
| TGCTGCCCGTCTTCCGCCTA+TGG | + | chr3_4:52787541-52787560 | Msa0506430:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 52786409 | 52792950 | 52786409 | ID=Msa0506430;Name=Msa0506430 |
| chr3_4 | mRNA | 52786409 | 52792950 | 52786409 | ID=Msa0506430-mRNA-1;Parent=Msa0506430;Name=Msa0506430-mRNA-1;_AED=0.81;_eAED=0.81;_QI=334|0.2|0.33|0.5|0.8|0.66|6|0|649 |
| chr3_4 | exon | 52786409 | 52786607 | 52786409 | ID=Msa0506430-mRNA-1:exon:11633;Parent=Msa0506430-mRNA-1 |
| chr3_4 | exon | 52787362 | 52787562 | 52787362 | ID=Msa0506430-mRNA-1:exon:11634;Parent=Msa0506430-mRNA-1 |
| chr3_4 | exon | 52789799 | 52789897 | 52789799 | ID=Msa0506430-mRNA-1:exon:11635;Parent=Msa0506430-mRNA-1 |
| chr3_4 | exon | 52789992 | 52791230 | 52789992 | ID=Msa0506430-mRNA-1:exon:11636;Parent=Msa0506430-mRNA-1 |
| chr3_4 | exon | 52791708 | 52792199 | 52791708 | ID=Msa0506430-mRNA-1:exon:11637;Parent=Msa0506430-mRNA-1 |
| chr3_4 | exon | 52792897 | 52792950 | 52792897 | ID=Msa0506430-mRNA-1:exon:11638;Parent=Msa0506430-mRNA-1 |
| chr3_4 | five_prime_UTR | 52786409 | 52786607 | 52786409 | ID=Msa0506430-mRNA-1:five_prime_utr;Parent=Msa0506430-mRNA-1 |
| chr3_4 | five_prime_UTR | 52787362 | 52787496 | 52787362 | ID=Msa0506430-mRNA-1:five_prime_utr;Parent=Msa0506430-mRNA-1 |
| chr3_4 | CDS | 52787497 | 52787562 | 52787497 | ID=Msa0506430-mRNA-1:cds;Parent=Msa0506430-mRNA-1 |
| chr3_4 | CDS | 52789799 | 52789897 | 52789799 | ID=Msa0506430-mRNA-1:cds;Parent=Msa0506430-mRNA-1 |
| chr3_4 | CDS | 52789992 | 52791230 | 52789992 | ID=Msa0506430-mRNA-1:cds;Parent=Msa0506430-mRNA-1 |
| chr3_4 | CDS | 52791708 | 52792199 | 52791708 | ID=Msa0506430-mRNA-1:cds;Parent=Msa0506430-mRNA-1 |
| chr3_4 | CDS | 52792897 | 52792950 | 52792897 | ID=Msa0506430-mRNA-1:cds;Parent=Msa0506430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
