Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0506470 | XP_039687274.1 | 65.368 | 693 | 169 | 8 | 2 | 625 | 489 | 1179 | 0.0 | 856 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0506470 | A0A072UUI6 | 64.489 | 704 | 160 | 9 | 2 | 625 | 181 | 874 | 0.0 | 844 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0443290 | Msa0506470 | 0.812241 | 4.680280e-51 | -8.615850e-47 |
| Msa0490870 | Msa0506470 | 0.813955 | 1.969581e-51 | -8.615850e-47 |
| Msa0506430 | Msa0506470 | 0.928482 | 2.711309e-92 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0506470 | MtrunA17_Chr3g0091861 | 64.306 | 706 | 160 | 10 | 2 | 625 | 429 | 1124 | 0.0 | 838 |
| Msa0506470 | MtrunA17_Chr3g0108011 | 65.786 | 681 | 150 | 10 | 24 | 625 | 539 | 1215 | 0.0 | 826 |
| Msa0506470 | MtrunA17_Chr3g0107931 | 64.900 | 698 | 164 | 8 | 2 | 625 | 512 | 1202 | 0.0 | 824 |
| Msa0506470 | MtrunA17_Chr3g0108811 | 61.988 | 684 | 173 | 11 | 24 | 625 | 520 | 1198 | 0.0 | 777 |
| Msa0506470 | MtrunA17_Chr3g0108821 | 61.786 | 683 | 167 | 11 | 24 | 625 | 508 | 1177 | 0.0 | 769 |
| Msa0506470 | MtrunA17_Chr3g0108171 | 58.874 | 693 | 130 | 13 | 23 | 572 | 531 | 1211 | 0.0 | 656 |
| Msa0506470 | MtrunA17_Chr3g0107281 | 61.216 | 477 | 135 | 6 | 206 | 634 | 3 | 477 | 0.0 | 546 |
| Msa0506470 | MtrunA17_Chr3g0091851 | 50.459 | 654 | 232 | 12 | 23 | 636 | 444 | 1045 | 6.48e-173 | 527 |
| Msa0506470 | MtrunA17_Chr3g0108151 | 52.096 | 668 | 172 | 20 | 6 | 570 | 498 | 1120 | 4.66e-171 | 528 |
| Msa0506470 | MtrunA17_Chr3g0097641 | 46.549 | 681 | 243 | 16 | 24 | 625 | 484 | 1122 | 1.24e-155 | 478 |
| Msa0506470 | MtrunA17_Chr7g0223931 | 70.796 | 339 | 66 | 2 | 24 | 329 | 337 | 675 | 2.13e-153 | 458 |
| Msa0506470 | MtrunA17_Chr3g0105521 | 48.408 | 628 | 233 | 16 | 25 | 584 | 395 | 999 | 1.19e-151 | 477 |
| Msa0506470 | MtrunA17_Chr3g0108071 | 68.956 | 364 | 80 | 6 | 277 | 632 | 13 | 351 | 7.05e-146 | 448 |
| Msa0506470 | MtrunA17_Chr3g0108221 | 74.751 | 301 | 64 | 4 | 332 | 625 | 1 | 296 | 2.52e-142 | 417 |
| Msa0506470 | MtrunA17_Chr3g0096721 | 44.530 | 649 | 271 | 17 | 24 | 625 | 509 | 1115 | 2.11e-141 | 441 |
| Msa0506470 | MtrunA17_Chr3g0105481 | 44.970 | 676 | 261 | 19 | 25 | 625 | 462 | 1101 | 8.57e-139 | 441 |
| Msa0506470 | MtrunA17_Chr3g0105551 | 46.488 | 598 | 240 | 14 | 34 | 584 | 544 | 1108 | 1.18e-138 | 445 |
| Msa0506470 | MtrunA17_Chr3g0096821 | 43.272 | 654 | 283 | 20 | 24 | 625 | 505 | 1122 | 5.60e-138 | 432 |
| Msa0506470 | MtrunA17_Chr3g0107211 | 39.031 | 702 | 243 | 21 | 25 | 576 | 514 | 1180 | 5.28e-119 | 382 |
| Msa0506470 | MtrunA17_Chr7g0229721 | 44.559 | 487 | 211 | 12 | 24 | 465 | 509 | 981 | 4.47e-112 | 360 |
| Msa0506470 | MtrunA17_Chr3g0107181 | 45.536 | 448 | 173 | 8 | 24 | 403 | 499 | 943 | 2.10e-107 | 347 |
| Msa0506470 | MtrunA17_Chr3g0097021 | 58.020 | 293 | 71 | 5 | 222 | 468 | 1 | 287 | 4.45e-95 | 295 |
| Msa0506470 | MtrunA17_Chr3g0107981 | 71.707 | 205 | 51 | 2 | 206 | 408 | 3 | 202 | 8.86e-94 | 288 |
| Msa0506470 | MtrunA17_Chr3g0106021 | 50.676 | 296 | 134 | 5 | 347 | 636 | 3 | 292 | 2.37e-88 | 280 |
| Msa0506470 | MtrunA17_Chr7g0229751 | 39.248 | 479 | 176 | 13 | 24 | 465 | 462 | 862 | 2.73e-82 | 277 |
| Msa0506470 | MtrunA17_Chr3g0108061 | 63.008 | 246 | 60 | 1 | 24 | 238 | 341 | 586 | 4.13e-80 | 265 |
| Msa0506470 | MtrunA17_Chr3g0097621 | 46.646 | 328 | 110 | 8 | 190 | 465 | 107 | 421 | 9.64e-73 | 241 |
| Msa0506470 | MtrunA17_Chr3g0108781 | 68.750 | 160 | 47 | 3 | 468 | 625 | 1 | 159 | 1.86e-66 | 216 |
| Msa0506470 | MtrunA17_Chr3g0105601 | 51.751 | 257 | 90 | 9 | 328 | 578 | 13 | 241 | 2.16e-65 | 223 |
| Msa0506470 | MtrunA17_Chr3g0106011 | 45.020 | 251 | 92 | 2 | 262 | 466 | 1 | 251 | 3.50e-57 | 194 |
| Msa0506470 | MtrunA17_Chr3g0108111 | 75.373 | 134 | 31 | 2 | 501 | 634 | 2 | 133 | 4.92e-56 | 201 |
| Msa0506470 | MtrunA17_Chr3g0107071 | 40.468 | 299 | 132 | 8 | 177 | 465 | 9 | 271 | 3.43e-43 | 157 |
| Msa0506470 | MtrunA17_Chr1g0160951 | 35.556 | 405 | 200 | 15 | 22 | 379 | 434 | 824 | 9.17e-43 | 166 |
| Msa0506470 | MtrunA17_Chr1g0160951 | 41.892 | 148 | 78 | 3 | 481 | 625 | 831 | 973 | 2.38e-24 | 109 |
| Msa0506470 | MtrunA17_Chr3g0097031 | 65.772 | 149 | 20 | 1 | 24 | 141 | 462 | 610 | 2.13e-42 | 162 |
| Msa0506470 | MtrunA17_Chr7g0223921 | 71.028 | 107 | 30 | 1 | 332 | 437 | 1 | 107 | 4.84e-42 | 147 |
| Msa0506470 | MtrunA17_Chr3g0097611 | 56.204 | 137 | 50 | 4 | 491 | 625 | 1 | 129 | 3.07e-39 | 141 |
| Msa0506470 | MtrunA17_Chr3g0099591 | 27.179 | 677 | 338 | 25 | 15 | 615 | 534 | 1131 | 1.44e-38 | 153 |
| Msa0506470 | MtrunA17_Chr5g0439121 | 28.722 | 571 | 328 | 21 | 56 | 567 | 555 | 1105 | 1.50e-38 | 153 |
| Msa0506470 | MtrunA17_Chr5g0439121 | 23.828 | 512 | 262 | 15 | 227 | 625 | 1009 | 1505 | 3.09e-14 | 76.6 |
| Msa0506470 | MtrunA17_Chr5g0439121 | 31.098 | 164 | 83 | 5 | 493 | 627 | 784 | 946 | 7.45e-14 | 75.5 |
| Msa0506470 | MtrunA17_Chr5g0443761 | 31.658 | 398 | 194 | 10 | 55 | 402 | 440 | 809 | 1.07e-35 | 144 |
| Msa0506470 | MtrunA17_Chr3g0106001 | 45.024 | 211 | 87 | 2 | 25 | 206 | 219 | 429 | 1.82e-34 | 136 |
| Msa0506470 | MtrunA17_Chr3g0099571 | 31.877 | 389 | 220 | 10 | 56 | 411 | 575 | 951 | 3.79e-34 | 139 |
| Msa0506470 | MtrunA17_Chr3g0100261 | 27.683 | 643 | 351 | 20 | 56 | 606 | 579 | 1199 | 9.01e-32 | 132 |
| Msa0506470 | MtrunA17_Chr3g0100231 | 30.130 | 385 | 224 | 11 | 56 | 405 | 286 | 660 | 4.17e-28 | 120 |
| Msa0506470 | MtrunA17_Chr3g0107631 | 38.974 | 195 | 86 | 8 | 281 | 466 | 17 | 187 | 5.38e-27 | 108 |
| Msa0506470 | MtrunA17_Chr3g0107191 | 51.111 | 135 | 60 | 3 | 491 | 621 | 1 | 133 | 1.41e-25 | 103 |
| Msa0506470 | MtrunA17_Chr8g0360991 | 31.771 | 384 | 218 | 11 | 56 | 405 | 578 | 951 | 1.31e-24 | 109 |
| Msa0506470 | MtrunA17_Chr3g0105511 | 45.070 | 142 | 58 | 5 | 324 | 461 | 16 | 141 | 6.53e-23 | 95.9 |
| Msa0506470 | MtrunA17_Chr3g0108791 | 51.515 | 99 | 16 | 1 | 24 | 90 | 335 | 433 | 4.65e-19 | 90.5 |
| Msa0506470 | MtrunA17_Chr2g0313591 | 24.290 | 634 | 344 | 24 | 56 | 614 | 566 | 1138 | 9.86e-18 | 88.2 |
| Msa0506470 | MtrunA17_Chr3g0105571 | 41.748 | 103 | 37 | 1 | 32 | 111 | 472 | 574 | 1.03e-11 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 129 sgRNAs with CRISPR-Local
Find 329 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGGGTGACATCTCTATTT+TGG | 0.087350 | 3_4:+52827950 | Msa0506470:CDS |
| ATATTAAACCTTCGTAATTT+AGG | 0.088643 | 3_4:-52828188 | None:intergenic |
| AAGAAGCCATCTTCCATTTC+TGG | 0.146104 | 3_4:+52828971 | Msa0506470:CDS |
| CATCATCAATTATTTGAAAT+AGG | 0.213893 | 3_4:-52828688 | None:intergenic |
| TCTCTATGATGATGTCAATT+TGG | 0.217577 | 3_4:+52827932 | Msa0506470:CDS |
| TATTAAACCTTCGTAATTTA+GGG | 0.231951 | 3_4:-52828187 | None:intergenic |
| GAGAAATTGGAATACATAAT+TGG | 0.234399 | 3_4:+52829904 | Msa0506470:CDS |
| CTTGGAACCATCAAGCTTAA+AGG | 0.250236 | 3_4:-52827723 | None:intergenic |
| TGTTGAAGATTGTGAGAAAT+TGG | 0.266106 | 3_4:+52829891 | Msa0506470:CDS |
| GCTCGAAGGAATGGATAATT+TGG | 0.268067 | 3_4:+52828508 | Msa0506470:CDS |
| ATAACACTGGTGGCAATAAC+TGG | 0.283750 | 3_4:+52829833 | Msa0506470:CDS |
| CACATTGTACGATTACATTC+TGG | 0.285680 | 3_4:-52828938 | None:intergenic |
| TAAAACCCCATTGGTTTCTA+AGG | 0.308199 | 3_4:+52829093 | Msa0506470:CDS |
| ATTCATATTGCCTTAACATA+TGG | 0.309524 | 3_4:+52829623 | Msa0506470:CDS |
| AATGGAAGATGGCTTCTTAA+TGG | 0.310575 | 3_4:-52828966 | None:intergenic |
| TCTTTAGATTGAATAGGTTT+AGG | 0.327430 | 3_4:-52828631 | None:intergenic |
| CTCTATGATGATGTCAATTT+GGG | 0.328537 | 3_4:+52827933 | Msa0506470:CDS |
| ATCAGTATTTATCCTATCTA+TGG | 0.330231 | 3_4:+52829729 | Msa0506470:CDS |
| ATCATCAATTATTTGAAATA+GGG | 0.333527 | 3_4:-52828687 | None:intergenic |
| GATAAGCTGAAATACATATT+TGG | 0.333653 | 3_4:+52828845 | Msa0506470:CDS |
| AATGACTCCAACAACATTCT+TGG | 0.347186 | 3_4:-52829754 | None:intergenic |
| TGAGAACTATTAACTAGAAA+TGG | 0.350719 | 3_4:+52825385 | Msa0506470:exon |
| GCTTGGTTCCCTCAAAGAAT+TGG | 0.352212 | 3_4:+52828880 | Msa0506470:CDS |
| CAAGTGTTTCAAGGCTTTGC+AGG | 0.353957 | 3_4:-52827977 | None:intergenic |
| TCGAGCATTTGCTGGAAATA+AGG | 0.360823 | 3_4:+52824498 | Msa0506470:five_prime_UTR |
| CAATATATATTGCATTTGAT+TGG | 0.371765 | 3_4:-52829025 | None:intergenic |
| AGAAGGAAGGTCTCCAATAC+TGG | 0.373565 | 3_4:-52829976 | None:intergenic |
| TCAACCGCATGACAATTTAA+TGG | 0.383828 | 3_4:+52829117 | Msa0506470:CDS |
| TTCTTAATAATAAGAACTTC+CGG | 0.387870 | 3_4:-52828740 | None:intergenic |
| AAATGTTGTGTGATATTGTT+TGG | 0.390087 | 3_4:-52830031 | None:intergenic |
| TCATCTTCATCTTCCAGTAT+TGG | 0.391900 | 3_4:+52829963 | Msa0506470:CDS |
| CATACGGCTCGAGCATTTGC+TGG | 0.399249 | 3_4:+52824490 | Msa0506470:five_prime_UTR |
| GATCGAAATCAAGTGTTTCA+AGG | 0.404545 | 3_4:-52827986 | None:intergenic |
| GTCTGCTGCAGAACTTGAAT+TGG | 0.412359 | 3_4:+52825285 | Msa0506470:five_prime_UTR |
| TTCATATTGCCTTAACATAT+GGG | 0.412525 | 3_4:+52829624 | Msa0506470:CDS |
| GGAAGTACAAATTCAAGTTC+TGG | 0.412597 | 3_4:-52828767 | None:intergenic |
| ACACACTCTTTAGATTGAAT+AGG | 0.414018 | 3_4:-52828637 | None:intergenic |
| TGACTCAATGTTTCAGAAAC+CGG | 0.414190 | 3_4:+52828721 | Msa0506470:CDS |
| TGATCCATGGGAACAATCTC+AGG | 0.417462 | 3_4:-52828371 | None:intergenic |
| CTCGGAAGCATCTCCAGAAA+TGG | 0.423130 | 3_4:-52828984 | None:intergenic |
| CATCCTTCAATCACTTCAAA+AGG | 0.425995 | 3_4:-52828101 | None:intergenic |
| ACATTGTACGATTACATTCT+GGG | 0.428638 | 3_4:-52828937 | None:intergenic |
| GGGAAAATGTCGATGAAAAT+CGG | 0.429008 | 3_4:-52828917 | None:intergenic |
| GGGAACCAAGCTGGACATCT+TGG | 0.431133 | 3_4:-52828868 | None:intergenic |
| TTCAAATAATTGATGATGGC+AGG | 0.434513 | 3_4:+52828693 | Msa0506470:CDS |
| CAATCTAAAGAGTGTGTCAT+TGG | 0.437821 | 3_4:+52828643 | Msa0506470:CDS |
| CTTAAAGGAAAACACATCCT+TGG | 0.439374 | 3_4:-52827708 | None:intergenic |
| ACTTGAGTGTTGTTTCAGAT+AGG | 0.440264 | 3_4:-52828283 | None:intergenic |
| TCTAATTGTCACTGTGCATA+AGG | 0.440751 | 3_4:+52827754 | Msa0506470:CDS |
| TGCTGCCCGTCTTCCGCCTA+TGG | 0.442093 | 3_4:+52825448 | Msa0506470:CDS |
| ACATTCTTGGAGCCATAGAT+AGG | 0.442502 | 3_4:-52829741 | None:intergenic |
| ATCAAAAGTCTTCTCGAAGT+TGG | 0.442702 | 3_4:+52828475 | Msa0506470:CDS |
| CACCAAGCTCCAATTCTTTG+AGG | 0.442781 | 3_4:-52828889 | None:intergenic |
| CCACTGCCGGCTACTCAGAT+TGG | 0.446607 | 3_4:+52824359 | Msa0506470:five_prime_UTR |
| CAAATGTTTACAATCCTCAA+TGG | 0.451969 | 3_4:-52828588 | None:intergenic |
| TTAAAGGAAAACACATCCTT+GGG | 0.454777 | 3_4:-52827707 | None:intergenic |
| GAGCACGTTCCCATATGTTA+AGG | 0.459154 | 3_4:-52829633 | None:intergenic |
| GGACACATGCTGACTAAACT+TGG | 0.462778 | 3_4:-52830009 | None:intergenic |
| GACAATTAGAATCTCAAGCT+TGG | 0.466326 | 3_4:-52827741 | None:intergenic |
| GTTGATCCTTAGAAACCAAT+GGG | 0.471629 | 3_4:-52829099 | None:intergenic |
| ATCACACCTTTCTATTGTGA+TGG | 0.472243 | 3_4:-52828825 | None:intergenic |
| ATCATTCATACCTTGATCCA+TGG | 0.475379 | 3_4:-52828384 | None:intergenic |
| TATGGCTCCAAGAATGTTGT+TGG | 0.476585 | 3_4:+52829747 | Msa0506470:CDS |
| AATTTGGAAGAATTGTTCAA+TGG | 0.477375 | 3_4:+52828524 | Msa0506470:CDS |
| ATTCTTTGAGGGAACCAAGC+TGG | 0.481173 | 3_4:-52828877 | None:intergenic |
| AATGTTGTGTGATATTGTTT+GGG | 0.481715 | 3_4:-52830030 | None:intergenic |
| CTATTTCAAATAATTGATGA+TGG | 0.488781 | 3_4:+52828689 | Msa0506470:CDS |
| AACTTGAACTCAATAACTGC+GGG | 0.494409 | 3_4:+52830067 | Msa0506470:CDS |
| TTGAGTTCAAGTTGTTTCAA+AGG | 0.496319 | 3_4:-52830057 | None:intergenic |
| AGATCATGAGCTTTGAGAAA+CGG | 0.502859 | 3_4:-52828788 | None:intergenic |
| ATAGCTAATTGTCATGATCA+TGG | 0.504506 | 3_4:-52830840 | None:intergenic |
| ATATTGCACAAGATATATGA+TGG | 0.504816 | 3_4:-52829670 | None:intergenic |
| CTTGAAGAGTTGTATTTCAA+AGG | 0.506154 | 3_4:+52828131 | Msa0506470:CDS |
| TAACACTGGTGGCAATAACT+GGG | 0.510956 | 3_4:+52829834 | Msa0506470:CDS |
| CTGCATGTTGGAGAAGGATC+AGG | 0.511048 | 3_4:+52824458 | Msa0506470:five_prime_UTR |
| TCCCTCAAAGAATTGGAGCT+TGG | 0.511317 | 3_4:+52828887 | Msa0506470:CDS |
| ACCAAGCTCCAATTCTTTGA+GGG | 0.513623 | 3_4:-52828888 | None:intergenic |
| ACTAGAAATGGAAAATGAGT+TGG | 0.514544 | 3_4:+52825397 | Msa0506470:exon |
| TCCAACATGCAGTAGCTAGC+AGG | 0.521828 | 3_4:-52824447 | None:intergenic |
| TAAATTGTTCAGAGAGTCAA+AGG | 0.524252 | 3_4:-52828555 | None:intergenic |
| CCAATCTGAGTAGCCGGCAG+TGG | 0.526494 | 3_4:-52824359 | None:intergenic |
| TTTAGAGAAGCTGTCCATTG+AGG | 0.526790 | 3_4:+52828574 | Msa0506470:CDS |
| GAGATTGTTCCCATGGATCA+AGG | 0.526817 | 3_4:+52828374 | Msa0506470:CDS |
| TAAAATCCATCACAATAGAA+AGG | 0.527176 | 3_4:+52828819 | Msa0506470:CDS |
| TGTACTAAAGCTCGAAGGAA+TGG | 0.530127 | 3_4:+52828499 | Msa0506470:CDS |
| AGTTCAAGTTGTTTCAAAGG+TGG | 0.534602 | 3_4:-52830054 | None:intergenic |
| GATTACCATAGGCGGAAGAC+GGG | 0.537318 | 3_4:-52825453 | None:intergenic |
| TTCAGAGAGTCAAAGGAAAG+AGG | 0.538200 | 3_4:-52828548 | None:intergenic |
| TTTGGCCAAGATGTCCAGCT+TGG | 0.543248 | 3_4:+52828863 | Msa0506470:CDS |
| TGAGTATCAATGACCACTGC+CGG | 0.547609 | 3_4:+52824346 | Msa0506470:five_prime_UTR |
| AACTTGGCAGATTACGAAGA+AGG | 0.554641 | 3_4:-52829993 | None:intergenic |
| CTAAAGAGTGTGTCATTGGA+AGG | 0.558727 | 3_4:+52828647 | Msa0506470:CDS |
| CATACCTGAGATTGTTCCCA+TGG | 0.564666 | 3_4:+52828367 | Msa0506470:CDS |
| CACAAGTACTAAAACCCCAT+TGG | 0.566221 | 3_4:+52829084 | Msa0506470:CDS |
| TGAACCGTTGTAAAATTGCA+AGG | 0.567908 | 3_4:+52828072 | Msa0506470:CDS |
| TAGCTACTGCATGTTGGAGA+AGG | 0.572143 | 3_4:+52824452 | Msa0506470:five_prime_UTR |
| GCATCTCCAGAAATGGAAGA+TGG | 0.574895 | 3_4:-52828977 | None:intergenic |
| CTTAGACTAAGAAGAATCGT+GGG | 0.575990 | 3_4:+52828329 | Msa0506470:CDS |
| GAACTCAATAACTGCGGGGA+CGG | 0.577347 | 3_4:+52830072 | Msa0506470:CDS |
| AGATTACCATAGGCGGAAGA+CGG | 0.579389 | 3_4:-52825454 | None:intergenic |
| TCCTGCTAGCTACTGCATGT+TGG | 0.579422 | 3_4:+52824446 | Msa0506470:five_prime_UTR |
| CGTGAAAACACTCAAGTGAA+AGG | 0.579917 | 3_4:+52830817 | Msa0506470:CDS |
| TCATTCATACCTTGATCCAT+GGG | 0.579986 | 3_4:-52828383 | None:intergenic |
| GAAATAGGGAGATCAACATC+GGG | 0.581715 | 3_4:-52828673 | None:intergenic |
| GGTTGATCCTTAGAAACCAA+TGG | 0.583204 | 3_4:-52829100 | None:intergenic |
| AGCAGGATCTCATTGTCTGA+TGG | 0.586534 | 3_4:-52824430 | None:intergenic |
| TAACTTTCCCTAAATTACGA+AGG | 0.587729 | 3_4:+52828180 | Msa0506470:CDS |
| AAATGCAATATATATTGTTG+TGG | 0.589892 | 3_4:+52829031 | Msa0506470:CDS |
| GATCAGGAGAATTGTTCATA+CGG | 0.591337 | 3_4:+52824474 | Msa0506470:five_prime_UTR |
| TGATGAATATTCGAGTTCAG+TGG | 0.591885 | 3_4:+52828211 | Msa0506470:CDS |
| AAACACATTATAATAGACAC+TGG | 0.599427 | 3_4:+52829802 | Msa0506470:CDS |
| TGAAATAGGGAGATCAACAT+CGG | 0.604053 | 3_4:-52828674 | None:intergenic |
| CGGGGACGGTAAAATCATCA+AGG | 0.607706 | 3_4:+52830086 | Msa0506470:CDS |
| TCTTAGACTAAGAAGAATCG+TGG | 0.616955 | 3_4:+52828328 | Msa0506470:CDS |
| GTTACCATTAAATTGTCATG+CGG | 0.631638 | 3_4:-52829121 | None:intergenic |
| TGGCAGATTACGAAGAAGGA+AGG | 0.633893 | 3_4:-52829989 | None:intergenic |
| GAGTATGCTTACTGTCAATG+AGG | 0.635355 | 3_4:-52828448 | None:intergenic |
| GTATTGTATGCAAGAAGCAG+AGG | 0.638565 | 3_4:+52828304 | Msa0506470:CDS |
| CAACTTGAACTCAATAACTG+CGG | 0.654909 | 3_4:+52830066 | Msa0506470:CDS |
| CTAGATTAGATTACCATAGG+CGG | 0.654927 | 3_4:-52825461 | None:intergenic |
| TTGGTTGTACTAAAGCTCGA+AGG | 0.662094 | 3_4:+52828494 | Msa0506470:CDS |
| TTAGACTAAGAAGAATCGTG+GGG | 0.669844 | 3_4:+52828330 | Msa0506470:CDS |
| GATGAAGATGAATCTGAGTG+TGG | 0.673759 | 3_4:-52829951 | None:intergenic |
| ACTGGAGATCACGATAACAC+TGG | 0.682397 | 3_4:+52829820 | Msa0506470:CDS |
| AACACTGGTGGCAATAACTG+GGG | 0.693163 | 3_4:+52829835 | Msa0506470:CDS |
| GGAGATCACGATAACACTGG+TGG | 0.699321 | 3_4:+52829823 | Msa0506470:CDS |
| ACTTGAACTCAATAACTGCG+GGG | 0.719943 | 3_4:+52830068 | Msa0506470:CDS |
| TAGACTAAGAAGAATCGTGG+GGG | 0.732887 | 3_4:+52828331 | Msa0506470:CDS |
| TTGATCCTTAGAAACCAATG+GGG | 0.735826 | 3_4:-52829098 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATCACATAAATTATTATT+AGG | + | chr3_4:52824710-52824729 | Msa0506470:intron | 10.0% |
| !! | AATCACATAAATTATTATTA+GGG | + | chr3_4:52824711-52824730 | Msa0506470:intron | 10.0% |
| !! | ATAAAAGTTCAAATAATTTA+AGG | + | chr3_4:52825050-52825069 | Msa0506470:intron | 10.0% |
| !!! | TTTATTTTTTATTTTTGTGT+AGG | - | chr3_4:52826909-52826928 | None:intergenic | 10.0% |
| !! | AAAAAAAAGTAGAAAATTAT+TGG | - | chr3_4:52827390-52827409 | None:intergenic | 10.0% |
| !!! | TTTTAAAAAAAACTAAAGAA+CGG | - | chr3_4:52829370-52829389 | None:intergenic | 10.0% |
| !!! | ATTAATGTACATTTTTTATT+TGG | + | chr3_4:52829534-52829553 | Msa0506470:intron | 10.0% |
| !!! | TTAATGTACATTTTTTATTT+GGG | + | chr3_4:52829535-52829554 | Msa0506470:intron | 10.0% |
| !!! | ATTTTTTTTATGTTTTTTAC+AGG | - | chr3_4:52830329-52830348 | None:intergenic | 10.0% |
| !! | TATAATTTACTAAAAAAAGT+AGG | + | chr3_4:52830626-52830645 | Msa0506470:intron | 10.0% |
| !! | ATAATTTACTAAAAAAAGTA+GGG | + | chr3_4:52830627-52830646 | Msa0506470:intron | 10.0% |
| !!! | ATTTTTTCTAAAATCTATTA+TGG | - | chr3_4:52830669-52830688 | None:intergenic | 10.0% |
| !!! | TAATAGATTTTAGAAAAAAT+AGG | + | chr3_4:52830669-52830688 | Msa0506470:intron | 10.0% |
| !! | AAAATTGTTGAGAAAATATT+TGG | - | chr3_4:52825180-52825199 | None:intergenic | 15.0% |
| !!! | ATTATGTTTTCTAAAATTGT+TGG | + | chr3_4:52825589-52825608 | Msa0506470:intron | 15.0% |
| !! | TAATTTCAAGCATTAAAAAA+AGG | + | chr3_4:52826104-52826123 | Msa0506470:intron | 15.0% |
| !! | AATTTCAAGCATTAAAAAAA+GGG | + | chr3_4:52826105-52826124 | Msa0506470:intron | 15.0% |
| !! | ACAAAATAATGTATATAGAT+AGG | - | chr3_4:52826289-52826308 | None:intergenic | 15.0% |
| !! | AATAACATTTACAAAATTGT+TGG | - | chr3_4:52826359-52826378 | None:intergenic | 15.0% |
| !! | TCTATTGAAATTTATTTAGA+TGG | + | chr3_4:52827024-52827043 | Msa0506470:intron | 15.0% |
| !!! | CTCATTTTTTGAAAATATTA+CGG | + | chr3_4:52827814-52827833 | Msa0506470:intron | 15.0% |
| !!! | TCATTTTTTGAAAATATTAC+GGG | + | chr3_4:52827815-52827834 | Msa0506470:intron | 15.0% |
| !!! | ATCATCAATTATTTGAAATA+GGG | - | chr3_4:52828690-52828709 | None:intergenic | 15.0% |
| !!! | GTTTAACTTCTATTTTTATT+TGG | + | chr3_4:52829573-52829592 | Msa0506470:intron | 15.0% |
| !! | TAACAAAGATATACAAAATA+GGG | - | chr3_4:52830115-52830134 | None:intergenic | 15.0% |
| !! | ATAACAAAGATATACAAAAT+AGG | - | chr3_4:52830116-52830135 | None:intergenic | 15.0% |
| !! | TTACAAAATTATCCTATAAA+CGG | - | chr3_4:52830395-52830414 | None:intergenic | 15.0% |
| !!! | TTTAAACAAGTACATTTTTT+AGG | + | chr3_4:52830498-52830517 | Msa0506470:intron | 15.0% |
| !!! | TTAAACAAGTACATTTTTTA+GGG | + | chr3_4:52830499-52830518 | Msa0506470:intron | 15.0% |
| !! | AATTACTCAAGTGTTATAAA+AGG | + | chr3_4:52824668-52824687 | Msa0506470:intron | 20.0% |
| !! | ATTACTCAAGTGTTATAAAA+GGG | + | chr3_4:52824669-52824688 | Msa0506470:intron | 20.0% |
| !! | CTCAAAAACTTCATAATAAA+TGG | - | chr3_4:52825369-52825388 | None:intergenic | 20.0% |
| !!! | AATTTCTTAAGAGTATTACA+AGG | + | chr3_4:52825803-52825822 | Msa0506470:intron | 20.0% |
| !!! | ATTTCTTAAGAGTATTACAA+GGG | + | chr3_4:52825804-52825823 | Msa0506470:intron | 20.0% |
| !!! | TTAAGAAAAGTTTAAAACTC+AGG | - | chr3_4:52825842-52825861 | None:intergenic | 20.0% |
| !! | ATATATAGATAGACTATGTT+TGG | - | chr3_4:52825987-52826006 | None:intergenic | 20.0% |
| !!! | TTTTTAATGCTTGAAATTAG+AGG | - | chr3_4:52826103-52826122 | None:intergenic | 20.0% |
| !! | ATTTCAAGCATTAAAAAAAG+GGG | + | chr3_4:52826106-52826125 | Msa0506470:intron | 20.0% |
| !! | ATTAACTAATCCTTTCATAT+TGG | - | chr3_4:52826234-52826253 | None:intergenic | 20.0% |
| !!! | TATGAAAGGATTAGTTAATA+TGG | + | chr3_4:52826235-52826254 | Msa0506470:intron | 20.0% |
| !! | TTGTAAATGTTATTAGTTAC+AGG | + | chr3_4:52826305-52826324 | Msa0506470:intron | 20.0% |
| !! | AAGATTCAATCTAGATAATT+AGG | - | chr3_4:52826433-52826452 | None:intergenic | 20.0% |
| !!! | AATTATGTTAGCTTTTGTAA+TGG | + | chr3_4:52826460-52826479 | Msa0506470:intron | 20.0% |
| !! | AACTATATAAGAAAGATGTA+TGG | - | chr3_4:52826587-52826606 | None:intergenic | 20.0% |
| !!! | ATCATTTTAACATGTTTTGT+TGG | - | chr3_4:52826714-52826733 | None:intergenic | 20.0% |
| !! | AAAATAAAATGGCTGATAAA+TGG | - | chr3_4:52826967-52826986 | None:intergenic | 20.0% |
| !! | GTGTGTATTGAAAAATAAAA+TGG | - | chr3_4:52826978-52826997 | None:intergenic | 20.0% |
| !! | AATTTCAATAGATCAAAGTT+AGG | - | chr3_4:52827016-52827035 | None:intergenic | 20.0% |
| !! | ATTAAGTAATCAATGTTTCA+TGG | - | chr3_4:52827323-52827342 | None:intergenic | 20.0% |
| !!! | CAACCATTTTATTTTTCAAA+CGG | + | chr3_4:52827607-52827626 | Msa0506470:intron | 20.0% |
| !! | GTTGTATGATAAAAATCAAA+AGG | + | chr3_4:52827634-52827653 | Msa0506470:intron | 20.0% |
| !!! | TATTTTCAAAAAATGAGTTC+AGG | - | chr3_4:52827811-52827830 | None:intergenic | 20.0% |
| !!! | CATTTTTTGAAAATATTACG+GGG | + | chr3_4:52827816-52827835 | Msa0506470:intron | 20.0% |
| !!! | ATTTTTTGAAAATATTACGG+GGG | + | chr3_4:52827817-52827836 | Msa0506470:intron | 20.0% |
| !! | TATTAAACCTTCGTAATTTA+GGG | - | chr3_4:52828190-52828209 | None:intergenic | 20.0% |
| !! | ATATTAAACCTTCGTAATTT+AGG | - | chr3_4:52828191-52828210 | None:intergenic | 20.0% |
| !!! | CATCATCAATTATTTGAAAT+AGG | - | chr3_4:52828691-52828710 | None:intergenic | 20.0% |
| !! | CTATTTCAAATAATTGATGA+TGG | + | chr3_4:52828689-52828708 | Msa0506470:CDS | 20.0% |
| !! | TTCTTAATAATAAGAACTTC+CGG | - | chr3_4:52828743-52828762 | None:intergenic | 20.0% |
| !! | CAATATATATTGCATTTGAT+TGG | - | chr3_4:52829028-52829047 | None:intergenic | 20.0% |
| !! | AAATGCAATATATATTGTTG+TGG | + | chr3_4:52829031-52829050 | Msa0506470:CDS | 20.0% |
| !! | TATTGTTGTGGTAAAAAATA+TGG | + | chr3_4:52829043-52829062 | Msa0506470:CDS | 20.0% |
| !! | ATTGTTGTGGTAAAAAATAT+GGG | + | chr3_4:52829044-52829063 | Msa0506470:CDS | 20.0% |
| !! | ATATAGTATTATATGTGCAT+AGG | + | chr3_4:52829255-52829274 | Msa0506470:intron | 20.0% |
| !! | CTATATAATATAACATGAGA+GGG | - | chr3_4:52829321-52829340 | None:intergenic | 20.0% |
| !!! | ACTTCTATTTTTATTTGGAT+TGG | + | chr3_4:52829578-52829597 | Msa0506470:intron | 20.0% |
| !!! | CAATGACTTTTCTTAAATTT+GGG | - | chr3_4:52829873-52829892 | None:intergenic | 20.0% |
| !!! | ACAATGACTTTTCTTAAATT+TGG | - | chr3_4:52829874-52829893 | None:intergenic | 20.0% |
| !! | AAAAATAGAGAAACTTATGT+GGG | - | chr3_4:52830209-52830228 | None:intergenic | 20.0% |
| !! | AAAAGATGATTAAACATGTT+TGG | + | chr3_4:52830357-52830376 | Msa0506470:intron | 20.0% |
| !! | TTTGTAAGAATTGTAAAATG+CGG | + | chr3_4:52830408-52830427 | Msa0506470:intron | 20.0% |
| !! | ATGTCATTGTTTACTAAATA+TGG | - | chr3_4:52830567-52830586 | None:intergenic | 20.0% |
| !! | TAGAAAAAATAGGAGTAAAT+AGG | + | chr3_4:52830679-52830698 | Msa0506470:intron | 20.0% |
| !! | TTGTAACTTTCATCAAAAAT+AGG | + | chr3_4:52830721-52830740 | Msa0506470:intron | 20.0% |
| !! | TGTAACTTTCATCAAAAATA+GGG | + | chr3_4:52830722-52830741 | Msa0506470:intron | 20.0% |
| !! | TATTTACTCGAAAAAATAGT+GGG | + | chr3_4:52830786-52830805 | Msa0506470:intron | 20.0% |
| ! | TTACTCAAGTGTTATAAAAG+GGG | + | chr3_4:52824670-52824689 | Msa0506470:intron | 25.0% |
| ! | TATAAAAGGGGAAATAACAT+TGG | + | chr3_4:52824682-52824701 | Msa0506470:intron | 25.0% |
| ! | TGTTGACAAACACTTATTTA+AGG | + | chr3_4:52824961-52824980 | Msa0506470:intron | 25.0% |
| ! | GTTGACAAACACTTATTTAA+GGG | + | chr3_4:52824962-52824981 | Msa0506470:intron | 25.0% |
| ! | CAAATCTCTAAGCAAAAAAA+AGG | - | chr3_4:52825027-52825046 | None:intergenic | 25.0% |
| ! | TTGTTGAGAAAATATTTGGA+TGG | - | chr3_4:52825176-52825195 | None:intergenic | 25.0% |
| ! | ATTTAAGTGAAATAAGGCAA+TGG | - | chr3_4:52825228-52825247 | None:intergenic | 25.0% |
| ! | TGAGAACTATTAACTAGAAA+TGG | + | chr3_4:52825385-52825404 | Msa0506470:exon | 25.0% |
| ! | TATCTAGATTAGATTACCAT+AGG | - | chr3_4:52825467-52825486 | None:intergenic | 25.0% |
| ! | TATTATGTTTGCATGTAAGA+AGG | - | chr3_4:52825509-52825528 | None:intergenic | 25.0% |
| ! | CTGCTGTAGAAATATAATTA+TGG | - | chr3_4:52825636-52825655 | None:intergenic | 25.0% |
| !!! | TCATACTTTAAAACTTTCAG+TGG | + | chr3_4:52825769-52825788 | Msa0506470:intron | 25.0% |
| !!! | TATAAGAAATTTTTTGCTCC+TGG | + | chr3_4:52826004-52826023 | Msa0506470:intron | 25.0% |
| ! | GAAAGTAAAATTAATATGCC+AGG | - | chr3_4:52826025-52826044 | None:intergenic | 25.0% |
| !!! | TCAGGTTTTAAACTTTAGTT+TGG | - | chr3_4:52826047-52826066 | None:intergenic | 25.0% |
| ! | AGTTGAAAAACAGAAAATAG+AGG | + | chr3_4:52826497-52826516 | Msa0506470:intron | 25.0% |
| ! | AAAAACAGAAAATAGAGGAA+AGG | + | chr3_4:52826502-52826521 | Msa0506470:intron | 25.0% |
| ! | TATAAGAAAGATGTATGGAT+GGG | - | chr3_4:52826582-52826601 | None:intergenic | 25.0% |
| ! | ATATAAGAAAGATGTATGGA+TGG | - | chr3_4:52826583-52826602 | None:intergenic | 25.0% |
| ! | ATACGATATCAACTATGTAT+AGG | - | chr3_4:52826637-52826656 | None:intergenic | 25.0% |
| !! | CATCAAAGAAATTTGAAACA+GGG | - | chr3_4:52826822-52826841 | None:intergenic | 25.0% |
| !! | TCATCAAAGAAATTTGAAAC+AGG | - | chr3_4:52826823-52826842 | None:intergenic | 25.0% |
| !!! | TGTTTTTTAGGATTTTGACT+TGG | - | chr3_4:52827179-52827198 | None:intergenic | 25.0% |
| !!! | GACTGCTTATAATGTTTTTT+AGG | - | chr3_4:52827191-52827210 | None:intergenic | 25.0% |
| ! | TGTTAATGCTTGAAATTAGA+TGG | - | chr3_4:52827229-52827248 | None:intergenic | 25.0% |
| ! | TAACAAATGAGAAATAACAG+TGG | + | chr3_4:52827244-52827263 | Msa0506470:intron | 25.0% |
| ! | AGTAGAAAATTATTGGAGTT+TGG | - | chr3_4:52827383-52827402 | None:intergenic | 25.0% |
| !! | CACTTTCTTAGATTTTCTAT+TGG | + | chr3_4:52827417-52827436 | Msa0506470:intron | 25.0% |
| ! | TCACCGTTTGAAAAATAAAA+TGG | - | chr3_4:52827613-52827632 | None:intergenic | 25.0% |
| !! | TATTCCTTGCAATTTTACAA+CGG | - | chr3_4:52828079-52828098 | None:intergenic | 25.0% |
| ! | AATTTGGAAGAATTGTTCAA+TGG | + | chr3_4:52828524-52828543 | Msa0506470:CDS | 25.0% |
| ! | TCTTTAGATTGAATAGGTTT+AGG | - | chr3_4:52828634-52828653 | None:intergenic | 25.0% |
| ! | TAAAATCCATCACAATAGAA+AGG | + | chr3_4:52828819-52828838 | Msa0506470:CDS | 25.0% |
| ! | GATAAGCTGAAATACATATT+TGG | + | chr3_4:52828845-52828864 | Msa0506470:CDS | 25.0% |
| ! | GCTATATAATATAACATGAG+AGG | - | chr3_4:52829322-52829341 | None:intergenic | 25.0% |
| ! | TAATAGTAATCTTCAAGCAT+AGG | - | chr3_4:52829518-52829537 | None:intergenic | 25.0% |
| ! | ATTCATATTGCCTTAACATA+TGG | + | chr3_4:52829623-52829642 | Msa0506470:CDS | 25.0% |
| ! | TTCATATTGCCTTAACATAT+GGG | + | chr3_4:52829624-52829643 | Msa0506470:CDS | 25.0% |
| ! | ATATTGCACAAGATATATGA+TGG | - | chr3_4:52829673-52829692 | None:intergenic | 25.0% |
| ! | ATCAGTATTTATCCTATCTA+TGG | + | chr3_4:52829729-52829748 | Msa0506470:CDS | 25.0% |
| ! | AAACACATTATAATAGACAC+TGG | + | chr3_4:52829802-52829821 | Msa0506470:CDS | 25.0% |
| ! | GAGAAATTGGAATACATAAT+TGG | + | chr3_4:52829904-52829923 | Msa0506470:CDS | 25.0% |
| ! | AATGTTGTGTGATATTGTTT+GGG | - | chr3_4:52830033-52830052 | None:intergenic | 25.0% |
| ! | AAATGTTGTGTGATATTGTT+TGG | - | chr3_4:52830034-52830053 | None:intergenic | 25.0% |
| ! | AAAATAGAGAAACTTATGTG+GGG | - | chr3_4:52830208-52830227 | None:intergenic | 25.0% |
| ! | CAAAAATAGAGAAACTTATG+TGG | - | chr3_4:52830210-52830229 | None:intergenic | 25.0% |
| ! | CTTATGCTAAACAAAAATTG+TGG | + | chr3_4:52830275-52830294 | Msa0506470:intron | 25.0% |
| ! | TTTCATCATAAACCGTTTAT+AGG | + | chr3_4:52830380-52830399 | Msa0506470:intron | 25.0% |
| ! | AAAATGCGGTTTATTTATGA+TGG | + | chr3_4:52830422-52830441 | Msa0506470:intron | 25.0% |
| ! | AAATGCGGTTTATTTATGAT+GGG | + | chr3_4:52830423-52830442 | Msa0506470:intron | 25.0% |
| !! | ACCTCTTAAATTTTGTTCAA+AGG | + | chr3_4:52830534-52830553 | Msa0506470:intron | 25.0% |
| ! | ACCTTTGAACAAAATTTAAG+AGG | - | chr3_4:52830538-52830557 | None:intergenic | 25.0% |
| !! | TCTTAAATTTTGTTCAAAGG+TGG | + | chr3_4:52830537-52830556 | Msa0506470:intron | 25.0% |
| !! | CTTAAATTTTGTTCAAAGGT+GGG | + | chr3_4:52830538-52830557 | Msa0506470:intron | 25.0% |
| !!! | CACTATTTTTTCGAGTAAAT+AGG | - | chr3_4:52830787-52830806 | None:intergenic | 25.0% |
| ! | CTATTTACTCGAAAAAATAG+TGG | + | chr3_4:52830785-52830804 | Msa0506470:intron | 25.0% |
| GCTACAATGTTATGATTACA+TGG | - | chr3_4:52824602-52824621 | None:intergenic | 30.0% | |
| TTGAGAAAATATTTGGATGG+TGG | - | chr3_4:52825173-52825192 | None:intergenic | 30.0% | |
| TGTGCAGAACTTGAATATAA+AGG | + | chr3_4:52825201-52825220 | Msa0506470:intron | 30.0% | |
| !! | GCCTTATTTCACTTAAATGA+TGG | + | chr3_4:52825230-52825249 | Msa0506470:intron | 30.0% |
| GCCATCATTTAAGTGAAATA+AGG | - | chr3_4:52825234-52825253 | None:intergenic | 30.0% | |
| ACTAGAAATGGAAAATGAGT+TGG | + | chr3_4:52825397-52825416 | Msa0506470:exon | 30.0% | |
| GCAAATATGCAATAGTAAAG+TGG | - | chr3_4:52825536-52825555 | None:intergenic | 30.0% | |
| GCATCATCAAGATCATAATA+AGG | - | chr3_4:52825681-52825700 | None:intergenic | 30.0% | |
| !!! | CATTTTTGAGGATTTTGACT+TGG | - | chr3_4:52826079-52826098 | None:intergenic | 30.0% |
| ! | GAAATTAGAGGACATTTTTG+AGG | - | chr3_4:52826091-52826110 | None:intergenic | 30.0% |
| AAAAAAAGGGGAAATAACAG+TGG | + | chr3_4:52826118-52826137 | Msa0506470:intron | 30.0% | |
| ! | AACTCCAACAATTTTGTTAC+AGG | + | chr3_4:52826261-52826280 | Msa0506470:intron | 30.0% |
| AATACTTTGTTGCACAAGTA+AGG | - | chr3_4:52826690-52826709 | None:intergenic | 30.0% | |
| TAGTCAGTTAGTCAACATAT+TGG | + | chr3_4:52826789-52826808 | Msa0506470:intron | 30.0% | |
| ! | AATTTTTACTCCAGTCATGT+TGG | + | chr3_4:52827112-52827131 | Msa0506470:intron | 30.0% |
| AAAAGTAAAACCAACATGAC+TGG | - | chr3_4:52827125-52827144 | None:intergenic | 30.0% | |
| AAGTAATCAATGTTTCATGG+TGG | - | chr3_4:52827320-52827339 | None:intergenic | 30.0% | |
| AGTAGAATGAAGAACGAAAA+TGG | - | chr3_4:52827453-52827472 | None:intergenic | 30.0% | |
| TTAAAGGAAAACACATCCTT+GGG | - | chr3_4:52827710-52827729 | None:intergenic | 30.0% | |
| ! | TCTCTATGATGATGTCAATT+TGG | + | chr3_4:52827932-52827951 | Msa0506470:CDS | 30.0% |
| ! | CTCTATGATGATGTCAATTT+GGG | + | chr3_4:52827933-52827952 | Msa0506470:CDS | 30.0% |
| !!! | TCTAGTTTTGTGATTCTATG+AGG | - | chr3_4:52828032-52828051 | None:intergenic | 30.0% |
| !!! | AATCCTTTTGAAGTGATTGA+AGG | + | chr3_4:52828098-52828117 | Msa0506470:CDS | 30.0% |
| CTTGAAGAGTTGTATTTCAA+AGG | + | chr3_4:52828131-52828150 | Msa0506470:CDS | 30.0% | |
| TAACTTTCCCTAAATTACGA+AGG | + | chr3_4:52828180-52828199 | Msa0506470:CDS | 30.0% | |
| TAAATTGTTCAGAGAGTCAA+AGG | - | chr3_4:52828558-52828577 | None:intergenic | 30.0% | |
| CAAATGTTTACAATCCTCAA+TGG | - | chr3_4:52828591-52828610 | None:intergenic | 30.0% | |
| ACACACTCTTTAGATTGAAT+AGG | - | chr3_4:52828640-52828659 | None:intergenic | 30.0% | |
| !! | TTCAAATAATTGATGATGGC+AGG | + | chr3_4:52828693-52828712 | Msa0506470:CDS | 30.0% |
| ACATTGTACGATTACATTCT+GGG | - | chr3_4:52828940-52828959 | None:intergenic | 30.0% | |
| !!! | ATTGGTTTTGATTGTTCTTG+TGG | - | chr3_4:52829010-52829029 | None:intergenic | 30.0% |
| GTTACCATTAAATTGTCATG+CGG | - | chr3_4:52829124-52829143 | None:intergenic | 30.0% | |
| AGAAGAAATAGAAGGTAAGA+GGG | - | chr3_4:52829146-52829165 | None:intergenic | 30.0% | |
| AACATCACAGAAGAAATAGA+AGG | - | chr3_4:52829154-52829173 | None:intergenic | 30.0% | |
| AAATAGACGTATTCTTGTAC+CGG | + | chr3_4:52829388-52829407 | Msa0506470:intron | 30.0% | |
| TATCAATAGCTATGTTGCAT+AGG | - | chr3_4:52829445-52829464 | None:intergenic | 30.0% | |
| TGTTGAAGATTGTGAGAAAT+TGG | + | chr3_4:52829891-52829910 | Msa0506470:CDS | 30.0% | |
| !! | TTGAGTTCAAGTTGTTTCAA+AGG | - | chr3_4:52830060-52830079 | None:intergenic | 30.0% |
| AAATAGAGAAACTTATGTGG+GGG | - | chr3_4:52830207-52830226 | None:intergenic | 30.0% | |
| AATGCGGTTTATTTATGATG+GGG | + | chr3_4:52830424-52830443 | Msa0506470:intron | 30.0% | |
| ATCTATTATGGATCATCCAA+AGG | - | chr3_4:52830657-52830676 | None:intergenic | 30.0% | |
| GATGAAAGTTACAATTTCAG+AGG | - | chr3_4:52830715-52830734 | None:intergenic | 30.0% | |
| ACTAACGTTTGACAATTTCA+GGG | + | chr3_4:52830751-52830770 | Msa0506470:intron | 30.0% | |
| GATCAGGAGAATTGTTCATA+CGG | + | chr3_4:52824474-52824493 | Msa0506470:five_prime_UTR | 35.0% | |
| CTAGATTAGATTACCATAGG+CGG | - | chr3_4:52825464-52825483 | None:intergenic | 35.0% | |
| GAGTTGTTGCAATCACAAAA+CGG | + | chr3_4:52825655-52825674 | Msa0506470:intron | 35.0% | |
| ! | TCAACATTTGCTGAAACTTC+TGG | + | chr3_4:52825728-52825747 | Msa0506470:intron | 35.0% |
| ! | TGCTGAAACTTCTGGAAATA+AGG | + | chr3_4:52825736-52825755 | Msa0506470:intron | 35.0% |
| TTTAGAGAAACCAACTGGAA+TGG | + | chr3_4:52825867-52825886 | Msa0506470:intron | 35.0% | |
| !! | CGAGTTGGTTTCTCTTAAAA+TGG | - | chr3_4:52825947-52825966 | None:intergenic | 35.0% |
| CTATCATTATCAACTCGAGT+TGG | - | chr3_4:52825962-52825981 | None:intergenic | 35.0% | |
| CCTTTCATATTGGTACAGAT+AGG | - | chr3_4:52826224-52826243 | None:intergenic | 35.0% | |
| CCTATCTGTACCAATATGAA+AGG | + | chr3_4:52826221-52826240 | Msa0506470:intron | 35.0% | |
| GGATCCTGTAACAAAATTGT+TGG | - | chr3_4:52826268-52826287 | None:intergenic | 35.0% | |
| TTTGCCATATTGGTACAGAT+AGG | - | chr3_4:52826333-52826352 | None:intergenic | 35.0% | |
| ! | TTGTTGGAGTTTTGCCATAT+TGG | - | chr3_4:52826252-52826271 | None:intergenic | 35.0% |
| GAAAGGAAGTGAAAGAGAAA+GGG | + | chr3_4:52826519-52826538 | Msa0506470:intron | 35.0% | |
| AAAGGAAGTGAAAGAGAAAG+GGG | + | chr3_4:52826520-52826539 | Msa0506470:intron | 35.0% | |
| CAGTTAGTCAACATATTGGA+TGG | + | chr3_4:52826793-52826812 | Msa0506470:intron | 35.0% | |
| CAAAGCAGTTTATCCACATA+AGG | - | chr3_4:52827076-52827095 | None:intergenic | 35.0% | |
| !!! | TAGGATTTTGACTTGGAATC+AGG | - | chr3_4:52827172-52827191 | None:intergenic | 35.0% |
| CTTGAAATTAGATGGCTACT+TGG | - | chr3_4:52827221-52827240 | None:intergenic | 35.0% | |
| TAAGTTGCAACTATGCAACA+TGG | + | chr3_4:52827342-52827361 | Msa0506470:intron | 35.0% | |
| CTTAAAGGAAAACACATCCT+TGG | - | chr3_4:52827711-52827730 | None:intergenic | 35.0% | |
| ! | GTGTTTTCCTTTAAGCTTGA+TGG | + | chr3_4:52827716-52827735 | Msa0506470:CDS | 35.0% |
| GACAATTAGAATCTCAAGCT+TGG | - | chr3_4:52827744-52827763 | None:intergenic | 35.0% | |
| TCTAATTGTCACTGTGCATA+AGG | + | chr3_4:52827754-52827773 | Msa0506470:CDS | 35.0% | |
| ! | GGTAATGATAGATCAAGTTG+AGG | - | chr3_4:52827876-52827895 | None:intergenic | 35.0% |
| ! | TTTGGGTGACATCTCTATTT+TGG | + | chr3_4:52827950-52827969 | Msa0506470:CDS | 35.0% |
| ! | TTGGGTGACATCTCTATTTT+GGG | + | chr3_4:52827951-52827970 | Msa0506470:CDS | 35.0% |
| GATCGAAATCAAGTGTTTCA+AGG | - | chr3_4:52827989-52828008 | None:intergenic | 35.0% | |
| TGAACCGTTGTAAAATTGCA+AGG | + | chr3_4:52828072-52828091 | Msa0506470:CDS | 35.0% | |
| CATCCTTCAATCACTTCAAA+AGG | - | chr3_4:52828104-52828123 | None:intergenic | 35.0% | |
| ! | TGATGAATATTCGAGTTCAG+TGG | + | chr3_4:52828211-52828230 | Msa0506470:CDS | 35.0% |
| !! | ACTTGAGTGTTGTTTCAGAT+AGG | - | chr3_4:52828286-52828305 | None:intergenic | 35.0% |
| TCTTAGACTAAGAAGAATCG+TGG | + | chr3_4:52828328-52828347 | Msa0506470:CDS | 35.0% | |
| CTTAGACTAAGAAGAATCGT+GGG | + | chr3_4:52828329-52828348 | Msa0506470:CDS | 35.0% | |
| TTAGACTAAGAAGAATCGTG+GGG | + | chr3_4:52828330-52828349 | Msa0506470:CDS | 35.0% | |
| TCATTCATACCTTGATCCAT+GGG | - | chr3_4:52828386-52828405 | None:intergenic | 35.0% | |
| ATCATTCATACCTTGATCCA+TGG | - | chr3_4:52828387-52828406 | None:intergenic | 35.0% | |
| ATCAAAAGTCTTCTCGAAGT+TGG | + | chr3_4:52828475-52828494 | Msa0506470:CDS | 35.0% | |
| ! | CAATCTAAAGAGTGTGTCAT+TGG | + | chr3_4:52828643-52828662 | Msa0506470:CDS | 35.0% |
| TGAAATAGGGAGATCAACAT+CGG | - | chr3_4:52828677-52828696 | None:intergenic | 35.0% | |
| TGACTCAATGTTTCAGAAAC+CGG | + | chr3_4:52828721-52828740 | Msa0506470:CDS | 35.0% | |
| ! | GGAAGTACAAATTCAAGTTC+TGG | - | chr3_4:52828770-52828789 | None:intergenic | 35.0% |
| !! | AGATCATGAGCTTTGAGAAA+CGG | - | chr3_4:52828791-52828810 | None:intergenic | 35.0% |
| !!! | ATTGTGATGGATTTTAGAGC+TGG | - | chr3_4:52828815-52828834 | None:intergenic | 35.0% |
| ATCACACCTTTCTATTGTGA+TGG | - | chr3_4:52828828-52828847 | None:intergenic | 35.0% | |
| GGGAAAATGTCGATGAAAAT+CGG | - | chr3_4:52828920-52828939 | None:intergenic | 35.0% | |
| CACATTGTACGATTACATTC+TGG | - | chr3_4:52828941-52828960 | None:intergenic | 35.0% | |
| AATGGAAGATGGCTTCTTAA+TGG | - | chr3_4:52828969-52828988 | None:intergenic | 35.0% | |
| !! | TTTTGATTGTTCTTGTGGCT+CGG | - | chr3_4:52829005-52829024 | None:intergenic | 35.0% |
| AAAAATATGGGCACAGATTG+AGG | + | chr3_4:52829056-52829075 | Msa0506470:CDS | 35.0% | |
| !! | TAAAACCCCATTGGTTTCTA+AGG | + | chr3_4:52829093-52829112 | Msa0506470:CDS | 35.0% |
| TTGATCCTTAGAAACCAATG+GGG | - | chr3_4:52829101-52829120 | None:intergenic | 35.0% | |
| GTTGATCCTTAGAAACCAAT+GGG | - | chr3_4:52829102-52829121 | None:intergenic | 35.0% | |
| TCAACCGCATGACAATTTAA+TGG | + | chr3_4:52829117-52829136 | Msa0506470:CDS | 35.0% | |
| CAGAAGAAATAGAAGGTAAG+AGG | - | chr3_4:52829147-52829166 | None:intergenic | 35.0% | |
| TCACATGCTTCAGAGATTAA+TGG | - | chr3_4:52829202-52829221 | None:intergenic | 35.0% | |
| !!! | ATGTGCATAGGAGTTTTTTG+TGG | + | chr3_4:52829267-52829286 | Msa0506470:intron | 35.0% |
| ATAGCTATGTTGCATAGGTA+CGG | - | chr3_4:52829440-52829459 | None:intergenic | 35.0% | |
| AATGACTCCAACAACATTCT+TGG | - | chr3_4:52829757-52829776 | None:intergenic | 35.0% | |
| TCATCTTCATCTTCCAGTAT+TGG | + | chr3_4:52829963-52829982 | Msa0506470:CDS | 35.0% | |
| !! | AGTTCAAGTTGTTTCAAAGG+TGG | - | chr3_4:52830057-52830076 | None:intergenic | 35.0% |
| CAACTTGAACTCAATAACTG+CGG | + | chr3_4:52830066-52830085 | Msa0506470:CDS | 35.0% | |
| AACTTGAACTCAATAACTGC+GGG | + | chr3_4:52830067-52830086 | Msa0506470:CDS | 35.0% | |
| TATTATGGATCATCCAAAGG+TGG | - | chr3_4:52830654-52830673 | None:intergenic | 35.0% | |
| GACTAACGTTTGACAATTTC+AGG | + | chr3_4:52830750-52830769 | Msa0506470:intron | 35.0% | |
| CTAACGTTTGACAATTTCAG+GGG | + | chr3_4:52830752-52830771 | Msa0506470:intron | 35.0% | |
| TAACGTTTGACAATTTCAGG+GGG | + | chr3_4:52830753-52830772 | Msa0506470:intron | 35.0% | |
| ! | AGTTTTCCAATCTGAGTAGC+CGG | - | chr3_4:52824368-52824387 | None:intergenic | 40.0% |
| ! | TCGAGCATTTGCTGGAAATA+AGG | + | chr3_4:52824498-52824517 | Msa0506470:five_prime_UTR | 40.0% |
| CTACTGCATATTGCAGAAAC+AGG | + | chr3_4:52825253-52825272 | Msa0506470:intron | 40.0% | |
| TGATGCTAGCTACTGCATAT+TGG | + | chr3_4:52825695-52825714 | Msa0506470:intron | 40.0% | |
| GAGCATTTAGAGAAACCAAC+TGG | + | chr3_4:52825862-52825881 | Msa0506470:intron | 40.0% | |
| CGATTCTTATCCATTCCAGT+TGG | - | chr3_4:52825880-52825899 | None:intergenic | 40.0% | |
| GGATCCTATCTGTACCAATA+TGG | + | chr3_4:52826326-52826345 | Msa0506470:intron | 40.0% | |
| !!! | GTTAGCTTTTGTAATGGCAG+CGG | + | chr3_4:52826466-52826485 | Msa0506470:intron | 40.0% |
| GGAAAGGAAGTGAAAGAGAA+AGG | + | chr3_4:52826518-52826537 | Msa0506470:intron | 40.0% | |
| AGAAAGATGTATGGATGGGA+TGG | - | chr3_4:52826578-52826597 | None:intergenic | 40.0% | |
| GTGTTCTGCACAAGTTAAGT+TGG | - | chr3_4:52826668-52826687 | None:intergenic | 40.0% | |
| ! | CTGATGAAAAGTGTGTCATC+AGG | + | chr3_4:52826939-52826958 | Msa0506470:intron | 40.0% |
| ATCAAAAGGCAGTCGATGAA+AGG | + | chr3_4:52827648-52827667 | Msa0506470:intron | 40.0% | |
| TCAAAAGGCAGTCGATGAAA+GGG | + | chr3_4:52827649-52827668 | Msa0506470:intron | 40.0% | |
| CTTGGAACCATCAAGCTTAA+AGG | - | chr3_4:52827726-52827745 | None:intergenic | 40.0% | |
| TTCAACGACTGAATTGACTG+AGG | - | chr3_4:52827897-52827916 | None:intergenic | 40.0% | |
| TAGACTAAGAAGAATCGTGG+GGG | + | chr3_4:52828331-52828350 | Msa0506470:CDS | 40.0% | |
| GAGTATGCTTACTGTCAATG+AGG | - | chr3_4:52828451-52828470 | None:intergenic | 40.0% | |
| TTGGTTGTACTAAAGCTCGA+AGG | + | chr3_4:52828494-52828513 | Msa0506470:CDS | 40.0% | |
| TGTACTAAAGCTCGAAGGAA+TGG | + | chr3_4:52828499-52828518 | Msa0506470:CDS | 40.0% | |
| GCTCGAAGGAATGGATAATT+TGG | + | chr3_4:52828508-52828527 | Msa0506470:CDS | 40.0% | |
| TTCAGAGAGTCAAAGGAAAG+AGG | - | chr3_4:52828551-52828570 | None:intergenic | 40.0% | |
| TTTAGAGAAGCTGTCCATTG+AGG | + | chr3_4:52828574-52828593 | Msa0506470:CDS | 40.0% | |
| ! | CTAAAGAGTGTGTCATTGGA+AGG | + | chr3_4:52828647-52828666 | Msa0506470:CDS | 40.0% |
| GAAATAGGGAGATCAACATC+GGG | - | chr3_4:52828676-52828695 | None:intergenic | 40.0% | |
| ACCAAGCTCCAATTCTTTGA+GGG | - | chr3_4:52828891-52828910 | None:intergenic | 40.0% | |
| AAGAAGCCATCTTCCATTTC+TGG | + | chr3_4:52828971-52828990 | Msa0506470:CDS | 40.0% | |
| !! | CAATGGGGTTTTAGTACTTG+TGG | - | chr3_4:52829086-52829105 | None:intergenic | 40.0% |
| CACAAGTACTAAAACCCCAT+TGG | + | chr3_4:52829084-52829103 | Msa0506470:CDS | 40.0% | |
| GGTTGATCCTTAGAAACCAA+TGG | - | chr3_4:52829103-52829122 | None:intergenic | 40.0% | |
| TAGCTATGTTGCATAGGTAC+GGG | - | chr3_4:52829439-52829458 | None:intergenic | 40.0% | |
| ACATTCTTGGAGCCATAGAT+AGG | - | chr3_4:52829744-52829763 | None:intergenic | 40.0% | |
| TATGGCTCCAAGAATGTTGT+TGG | + | chr3_4:52829747-52829766 | Msa0506470:CDS | 40.0% | |
| ATAACACTGGTGGCAATAAC+TGG | + | chr3_4:52829833-52829852 | Msa0506470:CDS | 40.0% | |
| TAACACTGGTGGCAATAACT+GGG | + | chr3_4:52829834-52829853 | Msa0506470:CDS | 40.0% | |
| GATGAAGATGAATCTGAGTG+TGG | - | chr3_4:52829954-52829973 | None:intergenic | 40.0% | |
| AACTTGGCAGATTACGAAGA+AGG | - | chr3_4:52829996-52830015 | None:intergenic | 40.0% | |
| ACTTGAACTCAATAACTGCG+GGG | + | chr3_4:52830068-52830087 | Msa0506470:CDS | 40.0% | |
| AAAAAAGTAGGGTCCACCTT+TGG | + | chr3_4:52830638-52830657 | Msa0506470:intron | 40.0% | |
| AACGTTTGACAATTTCAGGG+GGG | + | chr3_4:52830754-52830773 | Msa0506470:intron | 40.0% | |
| CGTGAAAACACTCAAGTGAA+AGG | + | chr3_4:52830817-52830836 | Msa0506470:CDS | 40.0% | |
| TGAGTATCAATGACCACTGC+CGG | + | chr3_4:52824346-52824365 | Msa0506470:five_prime_UTR | 45.0% | |
| AGCAGGATCTCATTGTCTGA+TGG | - | chr3_4:52824433-52824452 | None:intergenic | 45.0% | |
| TAGCTACTGCATGTTGGAGA+AGG | + | chr3_4:52824452-52824471 | Msa0506470:five_prime_UTR | 45.0% | |
| GTCTGCTGCAGAACTTGAAT+TGG | + | chr3_4:52825285-52825304 | Msa0506470:five_prime_UTR | 45.0% | |
| AGATTACCATAGGCGGAAGA+CGG | - | chr3_4:52825457-52825476 | None:intergenic | 45.0% | |
| !!! | GAGGATTTTGACTTGGAAGC+AGG | - | chr3_4:52826072-52826091 | None:intergenic | 45.0% |
| ! | GGCGAGTTTTCTGACTGATT+TGG | + | chr3_4:52827045-52827064 | Msa0506470:intron | 45.0% |
| ! | TGATTTGGCGAAGCCTTATG+TGG | + | chr3_4:52827060-52827079 | Msa0506470:intron | 45.0% |
| ! | TGACTTGGAATCAGGCTTCA+AGG | - | chr3_4:52827164-52827183 | None:intergenic | 45.0% |
| GTTATGTGAATGCAAGCCCA+AGG | + | chr3_4:52827691-52827710 | Msa0506470:intron | 45.0% | |
| CAAGTGTTTCAAGGCTTTGC+AGG | - | chr3_4:52827980-52827999 | None:intergenic | 45.0% | |
| TAAGAAGAATCGTGGGGGAA+TGG | + | chr3_4:52828336-52828355 | Msa0506470:CDS | 45.0% | |
| CATACCTGAGATTGTTCCCA+TGG | + | chr3_4:52828367-52828386 | Msa0506470:CDS | 45.0% | |
| TGATCCATGGGAACAATCTC+AGG | - | chr3_4:52828374-52828393 | None:intergenic | 45.0% | |
| GAGATTGTTCCCATGGATCA+AGG | + | chr3_4:52828374-52828393 | Msa0506470:CDS | 45.0% | |
| ! | ATTCTTTGAGGGAACCAAGC+TGG | - | chr3_4:52828880-52828899 | None:intergenic | 45.0% |
| GCTTGGTTCCCTCAAAGAAT+TGG | + | chr3_4:52828880-52828899 | Msa0506470:CDS | 45.0% | |
| TCCCTCAAAGAATTGGAGCT+TGG | + | chr3_4:52828887-52828906 | Msa0506470:CDS | 45.0% | |
| CACCAAGCTCCAATTCTTTG+AGG | - | chr3_4:52828892-52828911 | None:intergenic | 45.0% | |
| GCATCTCCAGAAATGGAAGA+TGG | - | chr3_4:52828980-52828999 | None:intergenic | 45.0% | |
| TACCGGTACTCGTATCATAC+TGG | + | chr3_4:52829405-52829424 | Msa0506470:intron | 45.0% | |
| ACCGGTACTCGTATCATACT+GGG | + | chr3_4:52829406-52829425 | Msa0506470:intron | 45.0% | |
| ACCCAGTATGATACGAGTAC+CGG | - | chr3_4:52829410-52829429 | None:intergenic | 45.0% | |
| GAGCACGTTCCCATATGTTA+AGG | - | chr3_4:52829636-52829655 | None:intergenic | 45.0% | |
| ACTGGAGATCACGATAACAC+TGG | + | chr3_4:52829820-52829839 | Msa0506470:CDS | 45.0% | |
| AACACTGGTGGCAATAACTG+GGG | + | chr3_4:52829835-52829854 | Msa0506470:CDS | 45.0% | |
| AGAAGGAAGGTCTCCAATAC+TGG | - | chr3_4:52829979-52829998 | None:intergenic | 45.0% | |
| TGGCAGATTACGAAGAAGGA+AGG | - | chr3_4:52829992-52830011 | None:intergenic | 45.0% | |
| ! | GGACACATGCTGACTAAACT+TGG | - | chr3_4:52830012-52830031 | None:intergenic | 45.0% |
| ACGTTTGACAATTTCAGGGG+GGG | + | chr3_4:52830755-52830774 | Msa0506470:intron | 45.0% | |
| TCCTGCTAGCTACTGCATGT+TGG | + | chr3_4:52824446-52824465 | Msa0506470:five_prime_UTR | 50.0% | |
| TCCAACATGCAGTAGCTAGC+AGG | - | chr3_4:52824450-52824469 | None:intergenic | 50.0% | |
| CTGCATGTTGGAGAAGGATC+AGG | + | chr3_4:52824458-52824477 | Msa0506470:five_prime_UTR | 50.0% | |
| GATTACCATAGGCGGAAGAC+GGG | - | chr3_4:52825456-52825475 | None:intergenic | 50.0% | |
| !! | TTGACTTGGAAGCAGGCTTC+AGG | - | chr3_4:52826065-52826084 | None:intergenic | 50.0% |
| GCAGCAAACAAAAGCTGCAG+AGG | - | chr3_4:52826383-52826402 | None:intergenic | 50.0% | |
| TTTGGCCAAGATGTCCAGCT+TGG | + | chr3_4:52828863-52828882 | Msa0506470:CDS | 50.0% | |
| !! | CTCGGAAGCATCTCCAGAAA+TGG | - | chr3_4:52828987-52829006 | None:intergenic | 50.0% |
| GGAGATCACGATAACACTGG+TGG | + | chr3_4:52829823-52829842 | Msa0506470:CDS | 50.0% | |
| GAACTCAATAACTGCGGGGA+CGG | + | chr3_4:52830072-52830091 | Msa0506470:CDS | 50.0% | |
| CGGGGACGGTAAAATCATCA+AGG | + | chr3_4:52830086-52830105 | Msa0506470:CDS | 50.0% | |
| CATACGGCTCGAGCATTTGC+TGG | + | chr3_4:52824490-52824509 | Msa0506470:five_prime_UTR | 55.0% | |
| GGGAACCAAGCTGGACATCT+TGG | - | chr3_4:52828871-52828890 | None:intergenic | 55.0% | |
| CCAATCTGAGTAGCCGGCAG+TGG | - | chr3_4:52824362-52824381 | None:intergenic | 60.0% | |
| ! | CCACTGCCGGCTACTCAGAT+TGG | + | chr3_4:52824359-52824378 | Msa0506470:five_prime_UTR | 60.0% |
| TGCTGCCCGTCTTCCGCCTA+TGG | + | chr3_4:52825448-52825467 | Msa0506470:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 52824321 | 52830858 | 52824321 | ID=Msa0506470;Name=Msa0506470 |
| chr3_4 | mRNA | 52824321 | 52830858 | 52824321 | ID=Msa0506470-mRNA-1;Parent=Msa0506470;Name=Msa0506470-mRNA-1;_AED=0.64;_eAED=0.64;_QI=334|0.2|0.33|0.5|0.8|0.66|6|0|649 |
| chr3_4 | exon | 52824321 | 52824519 | 52824321 | ID=Msa0506470-mRNA-1:exon:11627;Parent=Msa0506470-mRNA-1 |
| chr3_4 | exon | 52825269 | 52825469 | 52825269 | ID=Msa0506470-mRNA-1:exon:11628;Parent=Msa0506470-mRNA-1 |
| chr3_4 | exon | 52827707 | 52827805 | 52827707 | ID=Msa0506470-mRNA-1:exon:11629;Parent=Msa0506470-mRNA-1 |
| chr3_4 | exon | 52827900 | 52829138 | 52827900 | ID=Msa0506470-mRNA-1:exon:11630;Parent=Msa0506470-mRNA-1 |
| chr3_4 | exon | 52829616 | 52830107 | 52829616 | ID=Msa0506470-mRNA-1:exon:11631;Parent=Msa0506470-mRNA-1 |
| chr3_4 | exon | 52830805 | 52830858 | 52830805 | ID=Msa0506470-mRNA-1:exon:11632;Parent=Msa0506470-mRNA-1 |
| chr3_4 | five_prime_UTR | 52824321 | 52824519 | 52824321 | ID=Msa0506470-mRNA-1:five_prime_utr;Parent=Msa0506470-mRNA-1 |
| chr3_4 | five_prime_UTR | 52825269 | 52825403 | 52825269 | ID=Msa0506470-mRNA-1:five_prime_utr;Parent=Msa0506470-mRNA-1 |
| chr3_4 | CDS | 52825404 | 52825469 | 52825404 | ID=Msa0506470-mRNA-1:cds;Parent=Msa0506470-mRNA-1 |
| chr3_4 | CDS | 52827707 | 52827805 | 52827707 | ID=Msa0506470-mRNA-1:cds;Parent=Msa0506470-mRNA-1 |
| chr3_4 | CDS | 52827900 | 52829138 | 52827900 | ID=Msa0506470-mRNA-1:cds;Parent=Msa0506470-mRNA-1 |
| chr3_4 | CDS | 52829616 | 52830107 | 52829616 | ID=Msa0506470-mRNA-1:cds;Parent=Msa0506470-mRNA-1 |
| chr3_4 | CDS | 52830805 | 52830858 | 52830805 | ID=Msa0506470-mRNA-1:cds;Parent=Msa0506470-mRNA-1 |
| Gene Sequence |
| Protein sequence |
