Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0508750 | XP_003600872.1 | 97.284 | 626 | 15 | 1 | 1 | 624 | 1 | 626 | 0.0 | 1258 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0508750 | sp|Q9ZT48|ATE1_ARATH | 51.846 | 650 | 259 | 11 | 6 | 623 | 4 | 631 | 0.0 | 624 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0508750 | G7JB71 | 97.284 | 626 | 15 | 1 | 1 | 624 | 1 | 626 | 0.0 | 1258 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0372000 | Msa0508750 | 0.813961 | 1.963902e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0508750 | MtrunA17_Chr3g0113281 | 97.284 | 626 | 15 | 1 | 1 | 624 | 1 | 626 | 0.0 | 1258 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0508750 | AT5G05700.1 | 51.846 | 650 | 259 | 11 | 6 | 623 | 4 | 631 | 0.0 | 624 |
| Msa0508750 | AT3G11240.1 | 52.038 | 638 | 257 | 11 | 1 | 623 | 1 | 604 | 0.0 | 604 |
| Msa0508750 | AT3G11240.3 | 51.695 | 590 | 241 | 9 | 44 | 623 | 6 | 561 | 0.0 | 558 |
| Msa0508750 | AT5G05700.2 | 50.519 | 578 | 235 | 10 | 75 | 623 | 1 | 556 | 0.0 | 530 |
| Msa0508750 | AT3G11240.4 | 50.959 | 469 | 194 | 7 | 164 | 623 | 4 | 445 | 7.58e-150 | 440 |
| Msa0508750 | AT3G11240.2 | 50.959 | 469 | 194 | 7 | 164 | 623 | 4 | 445 | 7.58e-150 | 440 |
| Msa0508750 | AT3G11240.5 | 50.959 | 469 | 194 | 7 | 164 | 623 | 4 | 445 | 7.58e-150 | 440 |
Find 158 sgRNAs with CRISPR-Local
Find 403 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGAATTGTTTGAAGTATT+TGG | 0.169517 | 3_4:-56956841 | None:intergenic |
| GATTCAACAGTGAACATTTC+TGG | 0.176607 | 3_4:+56957258 | Msa0508750:CDS |
| TACTCTGCTCTTCAAGAAAT+TGG | 0.199151 | 3_4:+56957738 | Msa0508750:CDS |
| TTCTTGTGCATTTGCATATA+CGG | 0.212102 | 3_4:+56959333 | Msa0508750:three_prime_UTR |
| ACTCGACATTCTTCAATTTC+GGG | 0.215652 | 3_4:-56953626 | None:intergenic |
| CCAGCATTAGTTGCTGAATA+TGG | 0.218419 | 3_4:+56959384 | Msa0508750:three_prime_UTR |
| ATATACGGAATTTAATTTAA+TGG | 0.222822 | 3_4:+56959348 | Msa0508750:three_prime_UTR |
| CTATATAAAGCATATTCTTC+TGG | 0.228134 | 3_4:-56957450 | None:intergenic |
| TACTCGACATTCTTCAATTT+CGG | 0.228850 | 3_4:-56953627 | None:intergenic |
| TTCGGAAGAGATGAAAATTT+AGG | 0.238625 | 3_4:-56953603 | None:intergenic |
| CGATTCGTTGCAGACTTCTT+TGG | 0.247968 | 3_4:-56957372 | None:intergenic |
| TCCTTCTCACTATCTCTTGA+TGG | 0.258555 | 3_4:-56957186 | None:intergenic |
| ACAGTTCCTCCTTGTGGTTT+TGG | 0.260938 | 3_4:+56957585 | Msa0508750:CDS |
| TATCGAGTAAATATTTGTTC+TGG | 0.263562 | 3_4:+56957682 | Msa0508750:CDS |
| CAGCAACAACGCTTTCCTTT+GGG | 0.269424 | 3_4:-56953681 | None:intergenic |
| TTTGAAGTAGTTTCTATATC+AGG | 0.274161 | 3_4:-56958458 | None:intergenic |
| ACATTTCTGGTCTGTCTATC+AGG | 0.275790 | 3_4:+56957271 | Msa0508750:CDS |
| AAGTGACTTTGTTCCCTCTA+AGG | 0.312760 | 3_4:+56955585 | Msa0508750:CDS |
| TCAAATGGTGAACCAGAAAA+TGG | 0.316117 | 3_4:+56958476 | Msa0508750:CDS |
| TCGGAAGAGATGAAAATTTA+GGG | 0.319489 | 3_4:-56953602 | None:intergenic |
| GGGATTGTTCGATCTTTGAT+TGG | 0.329373 | 3_4:-56953582 | None:intergenic |
| GTATGTGAAACATATATTAA+TGG | 0.338861 | 3_4:-56957552 | None:intergenic |
| AAGGATCTGCAAAGTGTATT+TGG | 0.341290 | 3_4:+56959019 | Msa0508750:intron |
| TTTCCATCAACAGTATTTAG+TGG | 0.347193 | 3_4:+56957611 | Msa0508750:CDS |
| ACCATTCTGACTGAAGCTTT+TGG | 0.357966 | 3_4:-56957033 | None:intergenic |
| CCTTGTCCCTTGACTTTGCT+CGG | 0.359889 | 3_4:-56957146 | None:intergenic |
| TCAGCAACAACGCTTTCCTT+TGG | 0.361381 | 3_4:-56953682 | None:intergenic |
| TTCTGTTAGCTCTTCTTGAT+CGG | 0.362879 | 3_4:+56955479 | Msa0508750:intron |
| CATCCACTAAATACTGTTGA+TGG | 0.367065 | 3_4:-56957614 | None:intergenic |
| TTAATATATGTTTCACATAC+TGG | 0.367295 | 3_4:+56957555 | Msa0508750:CDS |
| TCTGTTAGCTCTTCTTGATC+GGG | 0.371855 | 3_4:+56955480 | Msa0508750:intron |
| TACACGAAGTTGTTCCTTAG+AGG | 0.382550 | 3_4:-56955599 | None:intergenic |
| ATCGAGTAAATATTTGTTCT+GGG | 0.383663 | 3_4:+56957683 | Msa0508750:CDS |
| TCTGCAACGAATCGTAATAT+TGG | 0.392297 | 3_4:+56957381 | Msa0508750:CDS |
| AGAAATGGTTGAATCTGAAT+TGG | 0.392690 | 3_4:+56958418 | Msa0508750:CDS |
| ATGGTAAATTAGTGGCAGTT+GGG | 0.392810 | 3_4:+56957634 | Msa0508750:CDS |
| CAGCTCCAGCTGCTGGATAC+AGG | 0.400677 | 3_4:-56959199 | None:intergenic |
| TAGCTCTTCTTGATCGGGGC+TGG | 0.413747 | 3_4:+56955485 | Msa0508750:intron |
| ACATTCTTCAATTTCGGGTT+CGG | 0.414367 | 3_4:-56953621 | None:intergenic |
| ATATTCTTCTGGATCAAAAC+TGG | 0.414826 | 3_4:-56957439 | None:intergenic |
| TGCACATGTTCACTGAGAAC+GGG | 0.420815 | 3_4:+56956986 | Msa0508750:CDS |
| GGATACAGGATCTTATTTGC+TGG | 0.421600 | 3_4:-56959185 | None:intergenic |
| TCATCTTCATCTTCATGCAT+TGG | 0.426710 | 3_4:-56958389 | None:intergenic |
| TGCCATTCCTAGAGACAAAT+GGG | 0.431593 | 3_4:-56959231 | None:intergenic |
| TTTGATCCCCATTTGTCTCT+AGG | 0.433714 | 3_4:+56959224 | Msa0508750:three_prime_UTR |
| AGAGATAGTGAGAAGGAGAA+TGG | 0.437181 | 3_4:+56957192 | Msa0508750:CDS |
| GATCGGGGCTGGAGAAGATC+TGG | 0.437268 | 3_4:+56955496 | Msa0508750:CDS |
| TATTTACTCGATAAACAGTT+AGG | 0.441413 | 3_4:-56957672 | None:intergenic |
| GTACTGGAGACTAGGACAAT+AGG | 0.443698 | 3_4:-56957781 | None:intergenic |
| TGCTCTTCAAGAAATTGGTT+GGG | 0.445508 | 3_4:+56957743 | Msa0508750:CDS |
| GAACCATGAGAGATGCTATT+GGG | 0.446557 | 3_4:-56953751 | None:intergenic |
| ACTGAACAATGAATTGAAAT+CGG | 0.447578 | 3_4:+56953551 | Msa0508750:five_prime_UTR |
| GATACAGGATCTTATTTGCT+GGG | 0.448971 | 3_4:-56959184 | None:intergenic |
| TTTAGTGGATGGTAAATTAG+TGG | 0.451470 | 3_4:+56957626 | Msa0508750:CDS |
| TGAAGATGAAGATGAAGAAA+TGG | 0.451588 | 3_4:+56958403 | Msa0508750:CDS |
| TCAAATTCAGCTCCAGCTGC+TGG | 0.453356 | 3_4:-56959206 | None:intergenic |
| TGCTTTCAAGCGGATTGTAT+AGG | 0.453379 | 3_4:-56955563 | None:intergenic |
| GGATTGTTCGATCTTTGATT+GGG | 0.453607 | 3_4:-56953581 | None:intergenic |
| GATATAGAAACTACTTCAAA+TGG | 0.453880 | 3_4:+56958461 | Msa0508750:CDS |
| ACCAAAAGCTTCAGTCAGAA+TGG | 0.453937 | 3_4:+56957032 | Msa0508750:CDS |
| AGTCTCCAGTACTATTATCT+TGG | 0.457037 | 3_4:+56957792 | Msa0508750:CDS |
| ATGCCATTCCTAGAGACAAA+TGG | 0.457435 | 3_4:-56959232 | None:intergenic |
| TGAACCATGAGAGATGCTAT+TGG | 0.459034 | 3_4:-56953752 | None:intergenic |
| AGTGATAGAAAGGCAAAGTC+TGG | 0.460759 | 3_4:-56957708 | None:intergenic |
| CTGCTCTTCAAGAAATTGGT+TGG | 0.462545 | 3_4:+56957742 | Msa0508750:CDS |
| TGGAGCATGATGGGTTGTTA+TGG | 0.468006 | 3_4:-56956873 | None:intergenic |
| ATAGAACATAAAATTGATTG+AGG | 0.477237 | 3_4:-56959468 | None:intergenic |
| GATTGTATAGGAAGGGCAAC+AGG | 0.478971 | 3_4:-56955551 | None:intergenic |
| TTCAGTCAGAATGGTTTCAC+AGG | 0.478971 | 3_4:+56957041 | Msa0508750:CDS |
| GGGTTTCATTTGACATTGCA+AGG | 0.480080 | 3_4:+56958219 | Msa0508750:CDS |
| CATCAACAGTATTTAGTGGA+TGG | 0.481200 | 3_4:+56957615 | Msa0508750:CDS |
| TAAAACTATTGCAGAAAAGC+TGG | 0.482141 | 3_4:+56957224 | Msa0508750:CDS |
| CAGAAATACAGGAGGGTTGT+CGG | 0.488102 | 3_4:+56959076 | Msa0508750:CDS |
| CATTTCTGGTCTGTCTATCA+GGG | 0.490558 | 3_4:+56957272 | Msa0508750:CDS |
| TGATCTTCAGCAACTTGAAG+TGG | 0.497795 | 3_4:-56958311 | None:intergenic |
| AGTAGCCAAGATAATAGTAC+TGG | 0.499159 | 3_4:-56957797 | None:intergenic |
| TGAAGTATTTGGTTCCTCCA+TGG | 0.500622 | 3_4:-56956830 | None:intergenic |
| AGTCACAGTTGCAGAAATAC+AGG | 0.501911 | 3_4:+56959065 | Msa0508750:CDS |
| AAGATCCTGTATCCAGCAGC+TGG | 0.502219 | 3_4:+56959194 | Msa0508750:three_prime_UTR |
| GATGGTAAATTAGTGGCAGT+TGG | 0.505487 | 3_4:+56957633 | Msa0508750:CDS |
| CCATATTCAGCAACTAATGC+TGG | 0.513454 | 3_4:-56959384 | None:intergenic |
| GATCTTCAGCAACTTGAAGT+GGG | 0.518193 | 3_4:-56958310 | None:intergenic |
| TCTTCTGACATGGAGCATGA+TGG | 0.520063 | 3_4:-56956883 | None:intergenic |
| TCGTGAGCAGCAGAGATACT+TGG | 0.521603 | 3_4:+56959042 | Msa0508750:CDS |
| GTACTTGCCTAGTGATAGAA+AGG | 0.522687 | 3_4:-56957718 | None:intergenic |
| AAAAGAAGGTATTAGCCAAT+GGG | 0.524221 | 3_4:+56957067 | Msa0508750:CDS |
| TATAGATGCAGCAACTTGAA+AGG | 0.525347 | 3_4:-56957121 | None:intergenic |
| TCCCCATTTGTCTCTAGGAA+TGG | 0.525816 | 3_4:+56959229 | Msa0508750:three_prime_UTR |
| GCTACTATATAAGAGGTCTT+CGG | 0.526478 | 3_4:-56957091 | None:intergenic |
| CTTGACCACTGTCATCAACC+TGG | 0.528218 | 3_4:-56958349 | None:intergenic |
| CTTCTGACATGGAGCATGAT+GGG | 0.528703 | 3_4:-56956882 | None:intergenic |
| TTTGGTAATTGAATACCAGA+TGG | 0.531867 | 3_4:-56957015 | None:intergenic |
| CTATATTGCTACTATATAAG+AGG | 0.536144 | 3_4:-56957098 | None:intergenic |
| AGAGGACATAGTAGCTCTGA+AGG | 0.537283 | 3_4:-56957864 | None:intergenic |
| TCTATCTGTTAGCAATAAAG+AGG | 0.539337 | 3_4:+56956909 | Msa0508750:CDS |
| TAAGAGGTCTTCGGACCCAT+TGG | 0.540930 | 3_4:-56957082 | None:intergenic |
| TCAAGACACTATGTTAAGCC+AGG | 0.546489 | 3_4:+56958331 | Msa0508750:CDS |
| TGGTTGGGTGAAAGATAACC+AGG | 0.546626 | 3_4:+56957758 | Msa0508750:CDS |
| TGGTAAATTAGTGGCAGTTG+GGG | 0.548028 | 3_4:+56957635 | Msa0508750:CDS |
| CAAAGTCACTTGCTTTCAAG+CGG | 0.550013 | 3_4:-56955573 | None:intergenic |
| GAGCGAATGGTCTACTCTCT+CGG | 0.557386 | 3_4:+56959112 | Msa0508750:CDS |
| TTCAAGCGGATTGTATAGGA+AGG | 0.557510 | 3_4:-56955559 | None:intergenic |
| GCAACGAATCGTAATATTGG+AGG | 0.558170 | 3_4:+56957384 | Msa0508750:CDS |
| ACACAGAAAGCTCATATCGC+AGG | 0.558720 | 3_4:+56957514 | Msa0508750:CDS |
| CACTGCATTATCAATCTGAT+CGG | 0.558763 | 3_4:-56956965 | None:intergenic |
| GAGAACGGGGAATTTCCATC+TGG | 0.560903 | 3_4:+56957000 | Msa0508750:CDS |
| GTGCACATGTTCACTGAGAA+CGG | 0.561725 | 3_4:+56956985 | Msa0508750:CDS |
| CTGTCTATCAGGGCTTGCAA+TGG | 0.562657 | 3_4:+56957282 | Msa0508750:CDS |
| TCTTAGTTGAAGCATCAAGT+TGG | 0.565198 | 3_4:+56959429 | Msa0508750:three_prime_UTR |
| TCCAGTGTTATCCGAGCGAA+TGG | 0.566865 | 3_4:+56959099 | Msa0508750:CDS |
| ACACGAAGTTGTTCCTTAGA+GGG | 0.574435 | 3_4:-56955598 | None:intergenic |
| AGATAATAGTACTGGAGACT+AGG | 0.577677 | 3_4:-56957789 | None:intergenic |
| CATGCTGGCATATAGCCTTA+CGG | 0.578182 | 3_4:+56954052 | Msa0508750:CDS |
| CTGTTAGCTCTTCTTGATCG+GGG | 0.579685 | 3_4:+56955481 | Msa0508750:intron |
| GGAAAGCGTCGAAGCTCTTG+TGG | 0.580414 | 3_4:+56953709 | Msa0508750:CDS |
| GACTTTGCCTTTCTATCACT+AGG | 0.581918 | 3_4:+56957711 | Msa0508750:CDS |
| AGCAACAACGCTTTCCTTTG+GGG | 0.582980 | 3_4:-56953680 | None:intergenic |
| CTATAAACCGAGCAAAGTCA+AGG | 0.583219 | 3_4:+56957139 | Msa0508750:CDS |
| GAAAGCGTTGTTGCTGATTG+CGG | 0.585631 | 3_4:+56953688 | Msa0508750:CDS |
| GGAGACTAGGACAATAGGCC+TGG | 0.586272 | 3_4:-56957776 | None:intergenic |
| TCTCTCGGTTAATTATATCT+CGG | 0.586725 | 3_4:+56959127 | Msa0508750:exon |
| CTTGGTAGTCATACACCGTA+AGG | 0.588665 | 3_4:-56954067 | None:intergenic |
| ATCTGTTAGCAATAAAGAGG+TGG | 0.589633 | 3_4:+56956912 | Msa0508750:CDS |
| CCGAGCAAAGTCAAGGGACA+AGG | 0.590380 | 3_4:+56957146 | Msa0508750:CDS |
| ACCATCAAGAGATAGTGAGA+AGG | 0.595095 | 3_4:+56957185 | Msa0508750:CDS |
| GATAACACAGTTCCTCCTTG+TGG | 0.595810 | 3_4:+56957579 | Msa0508750:CDS |
| CGTCCCAATAGCATCTCTCA+TGG | 0.596130 | 3_4:+56953748 | Msa0508750:CDS |
| GGGATCCCGTGTGAGATACA+AGG | 0.598121 | 3_4:+56958529 | Msa0508750:CDS |
| AGATAGAGATTCTTCTGACA+TGG | 0.604313 | 3_4:-56956893 | None:intergenic |
| ATCTTCAGCAACTTGAAGTG+GGG | 0.605213 | 3_4:-56958309 | None:intergenic |
| ATCATACCTTGTATCTCACA+CGG | 0.611139 | 3_4:-56958535 | None:intergenic |
| ATGATGGGTTGTTATGGACA+AGG | 0.611276 | 3_4:-56956867 | None:intergenic |
| TGAGAGATGCTATTGGGACG+AGG | 0.618053 | 3_4:-56953745 | None:intergenic |
| TCAGTCAGAATGGTTTCACA+GGG | 0.619527 | 3_4:+56957042 | Msa0508750:CDS |
| TAACGCTTTCTGTCAAGCAA+AGG | 0.626789 | 3_4:-56958242 | None:intergenic |
| ACCATTCGCTCGGATAACAC+TGG | 0.627386 | 3_4:-56959100 | None:intergenic |
| GCAAAGTCAAGGGACAAGGA+TGG | 0.632318 | 3_4:+56957150 | Msa0508750:CDS |
| GAAGAATGTCGAGTACGAAG+AGG | 0.633268 | 3_4:+56953635 | Msa0508750:exon |
| TATAAACCGAGCAAAGTCAA+GGG | 0.634803 | 3_4:+56957140 | Msa0508750:CDS |
| CACAGTTGCAGAAATACAGG+AGG | 0.636902 | 3_4:+56959068 | Msa0508750:CDS |
| ATACAGGATCTTATTTGCTG+GGG | 0.638032 | 3_4:-56959183 | None:intergenic |
| TCAAGCGGATTGTATAGGAA+GGG | 0.647018 | 3_4:-56955558 | None:intergenic |
| TGGAAAGAGCCAAAACCACA+AGG | 0.651081 | 3_4:-56957594 | None:intergenic |
| TAGCAGTAGCAAAACCCCAA+AGG | 0.653048 | 3_4:+56953666 | Msa0508750:CDS |
| TTAACTTACTGATAGCGAAG+AGG | 0.662453 | 3_4:-56957882 | None:intergenic |
| GAGAGAGTAGACCATTCGCT+CGG | 0.668897 | 3_4:-56959110 | None:intergenic |
| TGTTAAAAGAGTTGATGCCA+TGG | 0.669144 | 3_4:+56956813 | Msa0508750:CDS |
| GTGTATCTAGACGAATGCAA+AGG | 0.675511 | 3_4:+56955617 | Msa0508750:CDS |
| TAAAAGAGTTGATGCCATGG+AGG | 0.680258 | 3_4:+56956816 | Msa0508750:CDS |
| TCATACCTTGTATCTCACAC+GGG | 0.681061 | 3_4:-56958534 | None:intergenic |
| GAGGACATAGTAGCTCTGAA+GGG | 0.681722 | 3_4:-56957863 | None:intergenic |
| GCACATGTTCACTGAGAACG+GGG | 0.681833 | 3_4:+56956987 | Msa0508750:CDS |
| TTAAGCCAGGTTGATGACAG+TGG | 0.699199 | 3_4:+56958344 | Msa0508750:CDS |
| CTTACGGTGTATGACTACCA+AGG | 0.718339 | 3_4:+56954068 | Msa0508750:CDS |
| GCCATTCCTAGAGACAAATG+GGG | 0.718410 | 3_4:-56959230 | None:intergenic |
| ACAGTTGCAGAAATACAGGA+GGG | 0.725694 | 3_4:+56959069 | Msa0508750:CDS |
| AAAGAGCCAAAACCACAAGG+AGG | 0.739577 | 3_4:-56957591 | None:intergenic |
| CAGTCAGAATGGTTTCACAG+GGG | 0.766259 | 3_4:+56957043 | Msa0508750:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTAAAATATATATTTTAT+AGG | + | chr3_4:56954548-56954567 | Msa0508750:intron | 0.0% |
| !! | TTAATTATAAATAAAAAAAA+TGG | - | chr3_4:56956538-56956557 | None:intergenic | 0.0% |
| !!! | TAAAATTCATGTTTTTTTTA+TGG | + | chr3_4:56954745-56954764 | Msa0508750:intron | 10.0% |
| !! | ATTATAAATAAAAAAAATGG+TGG | - | chr3_4:56956535-56956554 | None:intergenic | 10.0% |
| !! | TTGAAAAACAATAAATTTGT+CGG | - | chr3_4:56953441-56953460 | None:intergenic | 15.0% |
| !!! | TTTGAATTCTTTTCTTTTTT+TGG | - | chr3_4:56953525-56953544 | None:intergenic | 15.0% |
| !!! | AAAACCAAAACTTTTTTATT+GGG | - | chr3_4:56953851-56953870 | None:intergenic | 15.0% |
| !!! | AAAAACCAAAACTTTTTTAT+TGG | - | chr3_4:56953852-56953871 | None:intergenic | 15.0% |
| !! | AAAAAAAAAGAATTTCTTAC+TGG | + | chr3_4:56953938-56953957 | Msa0508750:intron | 15.0% |
| !! | AAAAAAAAGAATTTCTTACT+GGG | + | chr3_4:56953939-56953958 | Msa0508750:intron | 15.0% |
| !!! | AAGTAATTATGATACTTTTA+TGG | - | chr3_4:56954522-56954541 | None:intergenic | 15.0% |
| !!! | ACTTTTGATTTTTAAATTGA+TGG | + | chr3_4:56955675-56955694 | Msa0508750:intron | 15.0% |
| !! | ATGAAAATTGTAACATATAA+AGG | - | chr3_4:56955924-56955943 | None:intergenic | 15.0% |
| !!! | TTTTTGAATAGTAACATTTT+GGG | - | chr3_4:56957343-56957362 | None:intergenic | 15.0% |
| !!! | ATATACGGAATTTAATTTAA+TGG | + | chr3_4:56959348-56959367 | Msa0508750:three_prime_UTR | 15.0% |
| !!! | ATTCTTTTCTTTTTTTGGAA+TGG | - | chr3_4:56953520-56953539 | None:intergenic | 20.0% |
| !! | AAACAAATTCAACGAAATTA+GGG | - | chr3_4:56953796-56953815 | None:intergenic | 20.0% |
| !!! | AAAACCCAATAAAAAAGTTT+TGG | + | chr3_4:56953844-56953863 | Msa0508750:intron | 20.0% |
| !!! | TTTCTTTTTTTTCTTGTTAC+AGG | + | chr3_4:56954029-56954048 | Msa0508750:intron | 20.0% |
| !! | TATAAAAAAAAGTTGAGACA+AGG | + | chr3_4:56954631-56954650 | Msa0508750:intron | 20.0% |
| !!! | AAAAACATGAATTTTAAGTC+TGG | - | chr3_4:56954741-56954760 | None:intergenic | 20.0% |
| !!! | ACGTAAAGTTTTTGAAATTT+AGG | - | chr3_4:56955053-56955072 | None:intergenic | 20.0% |
| !!! | TGGAACTTTTATTTATAAAC+CGG | + | chr3_4:56955516-56955535 | Msa0508750:CDS | 20.0% |
| !!! | CTTTTTGAATAGTAACATTT+TGG | - | chr3_4:56957344-56957363 | None:intergenic | 20.0% |
| !! | GTATGTGAAACATATATTAA+TGG | - | chr3_4:56957555-56957574 | None:intergenic | 20.0% |
| !! | TTAATATATGTTTCACATAC+TGG | + | chr3_4:56957555-56957574 | Msa0508750:CDS | 20.0% |
| !! | GTTAACATTATCTATTTCAT+AGG | - | chr3_4:56958052-56958071 | None:intergenic | 20.0% |
| !! | AAATAAAATATCGGTAAGTA+GGG | - | chr3_4:56958787-56958806 | None:intergenic | 20.0% |
| !!! | ATTATGTGAACTTAAGTTTT+TGG | + | chr3_4:56959266-56959285 | Msa0508750:three_prime_UTR | 20.0% |
| !! | ATAGAACATAAAATTGATTG+AGG | - | chr3_4:56959471-56959490 | None:intergenic | 20.0% |
| ! | ACTGAACAATGAATTGAAAT+CGG | + | chr3_4:56953551-56953570 | Msa0508750:five_prime_UTR | 25.0% |
| ! | AACAAATTCAACGAAATTAG+GGG | - | chr3_4:56953795-56953814 | None:intergenic | 25.0% |
| ! | CAAACAAATTCAACGAAATT+AGG | - | chr3_4:56953797-56953816 | None:intergenic | 25.0% |
| !! | AATTTCGTTGAATTTGTTTG+CGG | + | chr3_4:56953797-56953816 | Msa0508750:intron | 25.0% |
| !!! | TTTTTAACTGAAACGTGAAT+TGG | + | chr3_4:56953867-56953886 | Msa0508750:intron | 25.0% |
| !!! | TTTTAACTGAAACGTGAATT+GGG | + | chr3_4:56953868-56953887 | Msa0508750:intron | 25.0% |
| !!! | CATGTTTTTTTTATGGATGA+TGG | + | chr3_4:56954752-56954771 | Msa0508750:intron | 25.0% |
| !!! | TTTTTTATGGATGATGGTAA+TGG | + | chr3_4:56954758-56954777 | Msa0508750:intron | 25.0% |
| !!! | TTTTTATGGATGATGGTAAT+GGG | + | chr3_4:56954759-56954778 | Msa0508750:intron | 25.0% |
| !! | TTTTGTTGATATCCTAACAT+AGG | + | chr3_4:56954841-56954860 | Msa0508750:intron | 25.0% |
| ! | TTTGTTGATATCCTAACATA+GGG | + | chr3_4:56954842-56954861 | Msa0508750:intron | 25.0% |
| !! | TAAGTAAAGATTCTTTGAAG+GGG | - | chr3_4:56955230-56955249 | None:intergenic | 25.0% |
| ! | CTAAGTAAAGATTCTTTGAA+GGG | - | chr3_4:56955231-56955250 | None:intergenic | 25.0% |
| ! | TCTAAGTAAAGATTCTTTGA+AGG | - | chr3_4:56955232-56955251 | None:intergenic | 25.0% |
| !!! | TTTTATTTATAAACCGGAGA+TGG | + | chr3_4:56955522-56955541 | Msa0508750:CDS | 25.0% |
| ! | CATCATTATAGACATGATAT+GGG | + | chr3_4:56955754-56955773 | Msa0508750:intron | 25.0% |
| ! | GAGATAAATATGAATTCGAT+AGG | - | chr3_4:56955986-56956005 | None:intergenic | 25.0% |
| ! | TCAGTAAAAGAATAAACCTT+TGG | + | chr3_4:56956261-56956280 | Msa0508750:intron | 25.0% |
| ! | CAGTAAAAGAATAAACCTTT+GGG | + | chr3_4:56956262-56956281 | Msa0508750:intron | 25.0% |
| !!! | ACACTTTTTTCTATTTTCTC+TGG | + | chr3_4:56956560-56956579 | Msa0508750:intron | 25.0% |
| ! | TTCTTGCTAAAATAAAGGAA+AGG | - | chr3_4:56956639-56956658 | None:intergenic | 25.0% |
| ! | GAAAGTTCTTGCTAAAATAA+AGG | - | chr3_4:56956644-56956663 | None:intergenic | 25.0% |
| !!! | TATTTTAGCAAGAACTTTCA+AGG | + | chr3_4:56956645-56956664 | Msa0508750:intron | 25.0% |
| ! | TGAATTGCATATAATAGAAG+GGG | - | chr3_4:56956696-56956715 | None:intergenic | 25.0% |
| ! | GTGAATTGCATATAATAGAA+GGG | - | chr3_4:56956697-56956716 | None:intergenic | 25.0% |
| ! | AGTGAATTGCATATAATAGA+AGG | - | chr3_4:56956698-56956717 | None:intergenic | 25.0% |
| ! | AAACAAATTGGAACATTTAC+GGG | - | chr3_4:56956738-56956757 | None:intergenic | 25.0% |
| ! | CAAACAAATTGGAACATTTA+CGG | - | chr3_4:56956739-56956758 | None:intergenic | 25.0% |
| !! | TCTGAATTGTTTGAAGTATT+TGG | - | chr3_4:56956844-56956863 | None:intergenic | 25.0% |
| ! | CTATATTGCTACTATATAAG+AGG | - | chr3_4:56957101-56957120 | None:intergenic | 25.0% |
| ! | CTATATAAAGCATATTCTTC+TGG | - | chr3_4:56957453-56957472 | None:intergenic | 25.0% |
| ! | TATTTACTCGATAAACAGTT+AGG | - | chr3_4:56957675-56957694 | None:intergenic | 25.0% |
| ! | TATCGAGTAAATATTTGTTC+TGG | + | chr3_4:56957682-56957701 | Msa0508750:CDS | 25.0% |
| ! | ATCGAGTAAATATTTGTTCT+GGG | + | chr3_4:56957683-56957702 | Msa0508750:CDS | 25.0% |
| ! | AGAAGAAAAAAATCAAGCAA+CGG | - | chr3_4:56958124-56958143 | None:intergenic | 25.0% |
| !! | TTTGAAGTAGTTTCTATATC+AGG | - | chr3_4:56958461-56958480 | None:intergenic | 25.0% |
| ! | GATATAGAAACTACTTCAAA+TGG | + | chr3_4:56958461-56958480 | Msa0508750:CDS | 25.0% |
| ! | GTATGAAAAGGAAGAAATAT+AGG | - | chr3_4:56958715-56958734 | None:intergenic | 25.0% |
| !!! | TTGTCTTGGTAATATCTTTT+CGG | - | chr3_4:56958747-56958766 | None:intergenic | 25.0% |
| !! | GAGAAATTACAATTTTGTCT+TGG | - | chr3_4:56958761-56958780 | None:intergenic | 25.0% |
| ! | AATAAAATATCGGTAAGTAG+GGG | - | chr3_4:56958786-56958805 | None:intergenic | 25.0% |
| ! | CAAATAAAATATCGGTAAGT+AGG | - | chr3_4:56958788-56958807 | None:intergenic | 25.0% |
| !! | CTACTTACCGATATTTTATT+TGG | + | chr3_4:56958786-56958805 | Msa0508750:intron | 25.0% |
| ! | GTTACCTCCAAATAAAATAT+CGG | - | chr3_4:56958796-56958815 | None:intergenic | 25.0% |
| !!! | ATATTTTATTTGGAGGTAAC+CGG | + | chr3_4:56958796-56958815 | Msa0508750:intron | 25.0% |
| !!! | TTAGTTTTTCCTTAAACACA+TGG | - | chr3_4:56958855-56958874 | None:intergenic | 25.0% |
| TCGGAAGAGATGAAAATTTA+GGG | - | chr3_4:56953605-56953624 | None:intergenic | 30.0% | |
| TTCGGAAGAGATGAAAATTT+AGG | - | chr3_4:56953606-56953625 | None:intergenic | 30.0% | |
| TACTCGACATTCTTCAATTT+CGG | - | chr3_4:56953630-56953649 | None:intergenic | 30.0% | |
| TGTTTGGATTGTTGTGTTAT+AGG | + | chr3_4:56953963-56953982 | Msa0508750:intron | 30.0% | |
| TTAGAAGCCTATAAAGAAGA+GGG | - | chr3_4:56954342-56954361 | None:intergenic | 30.0% | |
| ATTAGAAGCCTATAAAGAAG+AGG | - | chr3_4:56954343-56954362 | None:intergenic | 30.0% | |
| ATTTGCCAACAAACCATTAT+AGG | + | chr3_4:56954399-56954418 | Msa0508750:intron | 30.0% | |
| ! | TATGGATACATCCCTATTTT+AGG | - | chr3_4:56954443-56954462 | None:intergenic | 30.0% |
| AAATAGGGATGTATCCATAT+AGG | + | chr3_4:56954444-56954463 | Msa0508750:intron | 30.0% | |
| GATACTTATAAGATGCTTCA+CGG | + | chr3_4:56954570-56954589 | Msa0508750:intron | 30.0% | |
| GCTTAATAACTAGATTAGCA+TGG | + | chr3_4:56955160-56955179 | Msa0508750:intron | 30.0% | |
| ! | AAGTAAAGATTCTTTGAAGG+GGG | - | chr3_4:56955229-56955248 | None:intergenic | 30.0% |
| TAAGCCTTCTCTATTTAAAG+AGG | - | chr3_4:56955269-56955288 | None:intergenic | 30.0% | |
| AAGGCTTATCTCATCTAAAA+AGG | + | chr3_4:56955281-56955300 | Msa0508750:intron | 30.0% | |
| AGGCTTATCTCATCTAAAAA+GGG | + | chr3_4:56955282-56955301 | Msa0508750:intron | 30.0% | |
| ATCAGCAAATCAATTTAGCT+TGG | - | chr3_4:56955423-56955442 | None:intergenic | 30.0% | |
| !! | TGATTTGCTGATATGACTTT+CGG | + | chr3_4:56955431-56955450 | Msa0508750:intron | 30.0% |
| ! | TTCAAGTTCAAAAGCTTTGT+TGG | + | chr3_4:56955731-56955750 | Msa0508750:intron | 30.0% |
| GCATCATTATAGACATGATA+TGG | + | chr3_4:56955753-56955772 | Msa0508750:intron | 30.0% | |
| TTATATCAGTCAAATGAGTG+AGG | - | chr3_4:56955815-56955834 | None:intergenic | 30.0% | |
| ACATATAAAGGAAACTCTGA+AGG | - | chr3_4:56955912-56955931 | None:intergenic | 30.0% | |
| ! | TGTTACAATTTTCATTCTCC+CGG | + | chr3_4:56955929-56955948 | Msa0508750:intron | 30.0% |
| TATTCAACTCGTATTCCAAA+AGG | - | chr3_4:56956480-56956499 | None:intergenic | 30.0% | |
| !!! | CTTTTTTCTATTTTCTCTGG+AGG | + | chr3_4:56956563-56956582 | Msa0508750:intron | 30.0% |
| TGCATCAATGTATTACCATA+AGG | + | chr3_4:56956603-56956622 | Msa0508750:intron | 30.0% | |
| TTTCAAGGAGGTTAAATACA+CGG | + | chr3_4:56956660-56956679 | Msa0508750:intron | 30.0% | |
| AATTGCATATAATAGAAGGG+GGG | - | chr3_4:56956694-56956713 | None:intergenic | 30.0% | |
| GAATTGCATATAATAGAAGG+GGG | - | chr3_4:56956695-56956714 | None:intergenic | 30.0% | |
| GAAAAGTGGAACAAACAAAT+TGG | - | chr3_4:56956750-56956769 | None:intergenic | 30.0% | |
| !! | TTTCTTCCTAGGTTTTTAGA+TGG | + | chr3_4:56956781-56956800 | Msa0508750:intron | 30.0% |
| ! | ATCAACTCTTTTAACATCCA+AGG | - | chr3_4:56956809-56956828 | None:intergenic | 30.0% |
| TCTATCTGTTAGCAATAAAG+AGG | + | chr3_4:56956909-56956928 | Msa0508750:CDS | 30.0% | |
| ! | TTTGGTAATTGAATACCAGA+TGG | - | chr3_4:56957018-56957037 | None:intergenic | 30.0% |
| !! | AAAAAGAAGGTATTAGCCAA+TGG | + | chr3_4:56957066-56957085 | Msa0508750:CDS | 30.0% |
| !! | AAAAGAAGGTATTAGCCAAT+GGG | + | chr3_4:56957067-56957086 | Msa0508750:CDS | 30.0% |
| ! | AGCTTTTCTGCAATAGTTTT+AGG | - | chr3_4:56957225-56957244 | None:intergenic | 30.0% |
| TAAAACTATTGCAGAAAAGC+TGG | + | chr3_4:56957224-56957243 | Msa0508750:CDS | 30.0% | |
| ATATTCTTCTGGATCAAAAC+TGG | - | chr3_4:56957442-56957461 | None:intergenic | 30.0% | |
| TTTCCATCAACAGTATTTAG+TGG | + | chr3_4:56957611-56957630 | Msa0508750:CDS | 30.0% | |
| ! | TTTAGTGGATGGTAAATTAG+TGG | + | chr3_4:56957626-56957645 | Msa0508750:CDS | 30.0% |
| ! | TTTTGGATAAACTACAAGCA+TGG | - | chr3_4:56957942-56957961 | None:intergenic | 30.0% |
| ! | ACGTTTATGCACAAAGTTTT+TGG | - | chr3_4:56957959-56957978 | None:intergenic | 30.0% |
| TATAGTAGAAGACTATGAAG+AGG | - | chr3_4:56958084-56958103 | None:intergenic | 30.0% | |
| TTTCACATAATATAGGAGGT+GGG | - | chr3_4:56958165-56958184 | None:intergenic | 30.0% | |
| CTTGTTTCACATAATATAGG+AGG | - | chr3_4:56958169-56958188 | None:intergenic | 30.0% | |
| CTCCTATATTATGTGAAACA+AGG | + | chr3_4:56958167-56958186 | Msa0508750:intron | 30.0% | |
| !! | AGCCTTGTTTCACATAATAT+AGG | - | chr3_4:56958172-56958191 | None:intergenic | 30.0% |
| ! | GATGCTTCCATTTTACAAAA+TGG | + | chr3_4:56958278-56958297 | Msa0508750:CDS | 30.0% |
| ! | TGACTCTCCATTTTGTAAAA+TGG | - | chr3_4:56958288-56958307 | None:intergenic | 30.0% |
| ! | ATTTCAGCAAAGTTTTGCTA+GGG | + | chr3_4:56958501-56958520 | Msa0508750:CDS | 30.0% |
| ! | AAAGTTTTGCTAGGGATAAA+GGG | + | chr3_4:56958509-56958528 | Msa0508750:CDS | 30.0% |
| !! | CAACTAACATTTTCTAAGGA+TGG | - | chr3_4:56958613-56958632 | None:intergenic | 30.0% |
| ! | TTCGCAACTAACATTTTCTA+AGG | - | chr3_4:56958617-56958636 | None:intergenic | 30.0% |
| TGTTAGTTGCGAAAAATTGT+AGG | + | chr3_4:56958624-56958643 | Msa0508750:intron | 30.0% | |
| ATAGCGAGTATGTTTCAAAA+TGG | + | chr3_4:56958665-56958684 | Msa0508750:intron | 30.0% | |
| !! | TGTCTTGGTAATATCTTTTC+GGG | - | chr3_4:56958746-56958765 | None:intergenic | 30.0% |
| !! | CTTACCGATATTTTATTTGG+AGG | + | chr3_4:56958789-56958808 | Msa0508750:intron | 30.0% |
| !!! | CAACATGACTAGTTTTACAT+TGG | - | chr3_4:56958882-56958901 | None:intergenic | 30.0% |
| ATGATTTATTTGTCCCATTC+TGG | + | chr3_4:56958946-56958965 | Msa0508750:intron | 30.0% | |
| TCTCTCGGTTAATTATATCT+CGG | + | chr3_4:56959127-56959146 | Msa0508750:exon | 30.0% | |
| !!! | GAACTTAAGTTTTTGGTCAA+TGG | + | chr3_4:56959273-56959292 | Msa0508750:three_prime_UTR | 30.0% |
| TTCTTGTGCATTTGCATATA+CGG | + | chr3_4:56959333-56959352 | Msa0508750:three_prime_UTR | 30.0% | |
| GGATTGTTCGATCTTTGATT+GGG | - | chr3_4:56953584-56953603 | None:intergenic | 35.0% | |
| !! | ACATTCTTCAATTTCGGGTT+CGG | - | chr3_4:56953624-56953643 | None:intergenic | 35.0% |
| ACTCGACATTCTTCAATTTC+GGG | - | chr3_4:56953629-56953648 | None:intergenic | 35.0% | |
| ATTAGGGGAATTGAAGAGAA+AGG | - | chr3_4:56953780-56953799 | None:intergenic | 35.0% | |
| ! | AATTGGGTTGTTGTTGTAGT+TGG | + | chr3_4:56953884-56953903 | Msa0508750:intron | 35.0% |
| GAATTTCTTACTGGGTTGTT+TGG | + | chr3_4:56953947-56953966 | Msa0508750:intron | 35.0% | |
| TGTTTGACATTCTTTGTGCT+TGG | + | chr3_4:56954098-56954117 | Msa0508750:intron | 35.0% | |
| TGTGTTGTACCTATATGACA+TGG | + | chr3_4:56954233-56954252 | Msa0508750:intron | 35.0% | |
| TGTACCTATATGACATGGTT+TGG | + | chr3_4:56954238-56954257 | Msa0508750:intron | 35.0% | |
| AGTTCCAAACCATGTCATAT+AGG | - | chr3_4:56954245-56954264 | None:intergenic | 35.0% | |
| TCATCACTTCAGTGTCAAAA+AGG | - | chr3_4:56954297-56954316 | None:intergenic | 35.0% | |
| TAGAAGCCTATAAAGAAGAG+GGG | - | chr3_4:56954341-56954360 | None:intergenic | 35.0% | |
| TCCAAATGTGCTTATGCTTT+CGG | + | chr3_4:56954372-56954391 | Msa0508750:intron | 35.0% | |
| !!! | TCCCTATTTTAGGAGTATCT+GGG | - | chr3_4:56954433-56954452 | None:intergenic | 35.0% |
| !!! | ATCCCTATTTTAGGAGTATC+TGG | - | chr3_4:56954434-56954453 | None:intergenic | 35.0% |
| TATCCATATAGGATACGTGT+CGG | + | chr3_4:56954455-56954474 | Msa0508750:intron | 35.0% | |
| ! | TACTACATATCCGAGAGTAT+TGG | - | chr3_4:56954495-56954514 | None:intergenic | 35.0% |
| ACAAGGTTGTGATAATTCAG+TGG | + | chr3_4:56954648-56954667 | Msa0508750:intron | 35.0% | |
| TTGATATCCTAACATAGGGA+TGG | + | chr3_4:56954846-56954865 | Msa0508750:intron | 35.0% | |
| ACTTTACGTATCAGTGTATC+CGG | + | chr3_4:56955064-56955083 | Msa0508750:intron | 35.0% | |
| TCTAGTTATTAAGCCTGACT+CGG | - | chr3_4:56955154-56955173 | None:intergenic | 35.0% | |
| ACTAGTTCATTGTTCATTGG+AGG | - | chr3_4:56955194-56955213 | None:intergenic | 35.0% | |
| GGTACTAGTTCATTGTTCAT+TGG | - | chr3_4:56955197-56955216 | None:intergenic | 35.0% | |
| ! | AGTAAAGATTCTTTGAAGGG+GGG | - | chr3_4:56955228-56955247 | None:intergenic | 35.0% |
| CTTCTCTATTTAAAGAGGTC+GGG | - | chr3_4:56955264-56955283 | None:intergenic | 35.0% | |
| CCTTCTCTATTTAAAGAGGT+CGG | - | chr3_4:56955265-56955284 | None:intergenic | 35.0% | |
| GGCTTATCTCATCTAAAAAG+GGG | + | chr3_4:56955283-56955302 | Msa0508750:intron | 35.0% | |
| TAATAACTAGGATCGCAACA+GGG | - | chr3_4:56955344-56955363 | None:intergenic | 35.0% | |
| TTAATAACTAGGATCGCAAC+AGG | - | chr3_4:56955345-56955364 | None:intergenic | 35.0% | |
| TTGCGATCCTAGTTATTAAC+AGG | + | chr3_4:56955346-56955365 | Msa0508750:intron | 35.0% | |
| TACTGCTCCTGTTAATAACT+AGG | - | chr3_4:56955356-56955375 | None:intergenic | 35.0% | |
| ! | TTCTGTTAGCTCTTCTTGAT+CGG | + | chr3_4:56955479-56955498 | Msa0508750:intron | 35.0% |
| ATTACGTATCAGTGAGAAAG+AGG | - | chr3_4:56955849-56955868 | None:intergenic | 35.0% | |
| ! | AGCATAAGCATCTAAGATTC+CGG | - | chr3_4:56955951-56955970 | None:intergenic | 35.0% |
| CTTGCTAGTTGTTATACACA+AGG | + | chr3_4:56956204-56956223 | Msa0508750:intron | 35.0% | |
| AAATCAAATCACCATTCACC+AGG | - | chr3_4:56956301-56956320 | None:intergenic | 35.0% | |
| !! | TTTTCTATTTTCTCTGGAGG+TGG | + | chr3_4:56956566-56956585 | Msa0508750:intron | 35.0% |
| !! | TTTCTATTTTCTCTGGAGGT+GGG | + | chr3_4:56956567-56956586 | Msa0508750:intron | 35.0% |
| TTTAGCAAGAACTTTCAAGG+AGG | + | chr3_4:56956648-56956667 | Msa0508750:intron | 35.0% | |
| TTCAAGGAGGTTAAATACAC+GGG | + | chr3_4:56956661-56956680 | Msa0508750:intron | 35.0% | |
| AAGGTTCCATCTAAAAACCT+AGG | - | chr3_4:56956790-56956809 | None:intergenic | 35.0% | |
| !! | TAGGTTTTTAGATGGAACCT+TGG | + | chr3_4:56956789-56956808 | Msa0508750:intron | 35.0% |
| !! | TGTTAAAAGAGTTGATGCCA+TGG | + | chr3_4:56956813-56956832 | Msa0508750:CDS | 35.0% |
| AGATAGAGATTCTTCTGACA+TGG | - | chr3_4:56956896-56956915 | None:intergenic | 35.0% | |
| ATCTGTTAGCAATAAAGAGG+TGG | + | chr3_4:56956912-56956931 | Msa0508750:CDS | 35.0% | |
| CACTGCATTATCAATCTGAT+CGG | - | chr3_4:56956968-56956987 | None:intergenic | 35.0% | |
| GCTACTATATAAGAGGTCTT+CGG | - | chr3_4:56957094-56957113 | None:intergenic | 35.0% | |
| TATAGATGCAGCAACTTGAA+AGG | - | chr3_4:56957124-56957143 | None:intergenic | 35.0% | |
| TATAAACCGAGCAAAGTCAA+GGG | + | chr3_4:56957140-56957159 | Msa0508750:CDS | 35.0% | |
| GATTCAACAGTGAACATTTC+TGG | + | chr3_4:56957258-56957277 | Msa0508750:CDS | 35.0% | |
| TCTGCAACGAATCGTAATAT+TGG | + | chr3_4:56957381-56957400 | Msa0508750:CDS | 35.0% | |
| ! | GAGCTTTCTGTGTAATTTTC+TGG | - | chr3_4:56957507-56957526 | None:intergenic | 35.0% |
| CATCCACTAAATACTGTTGA+TGG | - | chr3_4:56957617-56957636 | None:intergenic | 35.0% | |
| CATCAACAGTATTTAGTGGA+TGG | + | chr3_4:56957615-56957634 | Msa0508750:CDS | 35.0% | |
| ATGGTAAATTAGTGGCAGTT+GGG | + | chr3_4:56957634-56957653 | Msa0508750:CDS | 35.0% | |
| TACTCTGCTCTTCAAGAAAT+TGG | + | chr3_4:56957738-56957757 | Msa0508750:CDS | 35.0% | |
| TGCTCTTCAAGAAATTGGTT+GGG | + | chr3_4:56957743-56957762 | Msa0508750:CDS | 35.0% | |
| ! | AGATAATAGTACTGGAGACT+AGG | - | chr3_4:56957792-56957811 | None:intergenic | 35.0% |
| AGTCTCCAGTACTATTATCT+TGG | + | chr3_4:56957792-56957811 | Msa0508750:CDS | 35.0% | |
| AGTAGCCAAGATAATAGTAC+TGG | - | chr3_4:56957800-56957819 | None:intergenic | 35.0% | |
| ! | TTAACTTACTGATAGCGAAG+AGG | - | chr3_4:56957885-56957904 | None:intergenic | 35.0% |
| ACTATATCAGCATGCTGTAT+AGG | + | chr3_4:56958098-56958117 | Msa0508750:intron | 35.0% | |
| GTTTCACATAATATAGGAGG+TGG | - | chr3_4:56958166-56958185 | None:intergenic | 35.0% | |
| AACATCAATGAATGATCTCC+AGG | + | chr3_4:56958195-56958214 | Msa0508750:intron | 35.0% | |
| TCATCTTCATCTTCATGCAT+TGG | - | chr3_4:56958392-56958411 | None:intergenic | 35.0% | |
| TCAAATGGTGAACCAGAAAA+TGG | + | chr3_4:56958476-56958495 | Msa0508750:CDS | 35.0% | |
| ! | GATTTCAGCAAAGTTTTGCT+AGG | + | chr3_4:56958500-56958519 | Msa0508750:CDS | 35.0% |
| ! | CAAAGTTTTGCTAGGGATAA+AGG | + | chr3_4:56958508-56958527 | Msa0508750:CDS | 35.0% |
| ATCATACCTTGTATCTCACA+CGG | - | chr3_4:56958538-56958557 | None:intergenic | 35.0% | |
| GTGAATTTCAGACATGTTGT+CGG | + | chr3_4:56958687-56958706 | Msa0508750:intron | 35.0% | |
| TAGTGATAGAGGAAAGAGTT+TGG | + | chr3_4:56958827-56958846 | Msa0508750:intron | 35.0% | |
| AGTTTGGATCCATGTGTTTA+AGG | + | chr3_4:56958843-56958862 | Msa0508750:intron | 35.0% | |
| ACTAGTCATGTTGCATGTTT+AGG | + | chr3_4:56958889-56958908 | Msa0508750:intron | 35.0% | |
| ATGGGACAAATAAATCATGC+AGG | - | chr3_4:56958944-56958963 | None:intergenic | 35.0% | |
| AAGGATCTGCAAAGTGTATT+TGG | + | chr3_4:56959019-56959038 | Msa0508750:intron | 35.0% | |
| ! | ATACAGGATCTTATTTGCTG+GGG | - | chr3_4:56959186-56959205 | None:intergenic | 35.0% |
| ! | GATACAGGATCTTATTTGCT+GGG | - | chr3_4:56959187-56959206 | None:intergenic | 35.0% |
| ! | TCTTAGTTGAAGCATCAAGT+TGG | + | chr3_4:56959429-56959448 | Msa0508750:three_prime_UTR | 35.0% |
| GGGATTGTTCGATCTTTGAT+TGG | - | chr3_4:56953585-56953604 | None:intergenic | 40.0% | |
| GAACCATGAGAGATGCTATT+GGG | - | chr3_4:56953754-56953773 | None:intergenic | 40.0% | |
| TGAACCATGAGAGATGCTAT+TGG | - | chr3_4:56953755-56953774 | None:intergenic | 40.0% | |
| ! | TTTTCTTGTTACAGGCATGC+TGG | + | chr3_4:56954037-56954056 | Msa0508750:intron | 40.0% |
| ATGTCAAACAACACCAACCT+TGG | - | chr3_4:56954088-56954107 | None:intergenic | 40.0% | |
| TTCAGACCCCTCTTCTTTAT+AGG | + | chr3_4:56954332-56954351 | Msa0508750:intron | 40.0% | |
| ! | TCCGAAAGCATAAGCACATT+TGG | - | chr3_4:56954376-56954395 | None:intergenic | 40.0% |
| ! | CGTAGCCTATAATGGTTTGT+TGG | - | chr3_4:56954407-56954426 | None:intergenic | 40.0% |
| AGCCCAGATACTCCTAAAAT+AGG | + | chr3_4:56954428-56954447 | Msa0508750:intron | 40.0% | |
| GCCCAGATACTCCTAAAATA+GGG | + | chr3_4:56954429-56954448 | Msa0508750:intron | 40.0% | |
| ATGCTTCACGGATATACTCT+CGG | + | chr3_4:56954582-56954601 | Msa0508750:intron | 40.0% | |
| CTATTCTCCATCCCTATGTT+AGG | - | chr3_4:56954856-56954875 | None:intergenic | 40.0% | |
| GGTGTGAAAGTAAAACGATC+CGG | - | chr3_4:56955086-56955105 | None:intergenic | 40.0% | |
| ! | TAAAGATTCTTTGAAGGGGG+GGG | - | chr3_4:56955226-56955245 | None:intergenic | 40.0% |
| ! | GTAAAGATTCTTTGAAGGGG+GGG | - | chr3_4:56955227-56955246 | None:intergenic | 40.0% |
| TTTAAAGAGGTCGGGAGAAA+TGG | - | chr3_4:56955256-56955275 | None:intergenic | 40.0% | |
| CCGACCTCTTTAAATAGAGA+AGG | + | chr3_4:56955262-56955281 | Msa0508750:intron | 40.0% | |
| AAAGGGGACTCATTATTCAC+TGG | + | chr3_4:56955299-56955318 | Msa0508750:intron | 40.0% | |
| !! | CAACAGGGTTTTTGTTTCAG+TGG | - | chr3_4:56955329-56955348 | None:intergenic | 40.0% |
| ! | TCTGTTAGCTCTTCTTGATC+GGG | + | chr3_4:56955480-56955499 | Msa0508750:intron | 40.0% |
| !!! | CAACAGGTTTTTTCCATCTC+CGG | - | chr3_4:56955538-56955557 | None:intergenic | 40.0% |
| !! | TCAAGCGGATTGTATAGGAA+GGG | - | chr3_4:56955561-56955580 | None:intergenic | 40.0% |
| !! | TTCAAGCGGATTGTATAGGA+AGG | - | chr3_4:56955562-56955581 | None:intergenic | 40.0% |
| !! | TGCTTTCAAGCGGATTGTAT+AGG | - | chr3_4:56955566-56955585 | None:intergenic | 40.0% |
| CAAAGTCACTTGCTTTCAAG+CGG | - | chr3_4:56955576-56955595 | None:intergenic | 40.0% | |
| AAGTGACTTTGTTCCCTCTA+AGG | + | chr3_4:56955585-56955604 | Msa0508750:CDS | 40.0% | |
| ACACGAAGTTGTTCCTTAGA+GGG | - | chr3_4:56955601-56955620 | None:intergenic | 40.0% | |
| TACACGAAGTTGTTCCTTAG+AGG | - | chr3_4:56955602-56955621 | None:intergenic | 40.0% | |
| GTGTATCTAGACGAATGCAA+AGG | + | chr3_4:56955617-56955636 | Msa0508750:CDS | 40.0% | |
| ATCAGTGAGAAAGAGGATGA+TGG | - | chr3_4:56955842-56955861 | None:intergenic | 40.0% | |
| ! | GCATAAGCATCTAAGATTCC+GGG | - | chr3_4:56955950-56955969 | None:intergenic | 40.0% |
| ! | GTATGTGAGTTGAGACTTGA+TGG | + | chr3_4:56956372-56956391 | Msa0508750:intron | 40.0% |
| AAGTCCTCACATAGTCACAT+GGG | + | chr3_4:56956433-56956452 | Msa0508750:intron | 40.0% | |
| AAAGGAGAAGCAACACCTTA+TGG | - | chr3_4:56956621-56956640 | None:intergenic | 40.0% | |
| !! | TTTGTTCCACTTTTCACCGA+TGG | + | chr3_4:56956755-56956774 | Msa0508750:intron | 40.0% |
| AAAGAACCATCGGTGAAAAG+TGG | - | chr3_4:56956764-56956783 | None:intergenic | 40.0% | |
| ACCTAGGAAGAAAGAACCAT+CGG | - | chr3_4:56956774-56956793 | None:intergenic | 40.0% | |
| !! | TAAAAGAGTTGATGCCATGG+AGG | + | chr3_4:56956816-56956835 | Msa0508750:CDS | 40.0% |
| ! | TGAAGTATTTGGTTCCTCCA+TGG | - | chr3_4:56956833-56956852 | None:intergenic | 40.0% |
| !! | ATGATGGGTTGTTATGGACA+AGG | - | chr3_4:56956870-56956889 | None:intergenic | 40.0% |
| ACCAAAAGCTTCAGTCAGAA+TGG | + | chr3_4:56957032-56957051 | Msa0508750:CDS | 40.0% | |
| ! | ACCATTCTGACTGAAGCTTT+TGG | - | chr3_4:56957036-56957055 | None:intergenic | 40.0% |
| TTCAGTCAGAATGGTTTCAC+AGG | + | chr3_4:56957041-56957060 | Msa0508750:CDS | 40.0% | |
| TCAGTCAGAATGGTTTCACA+GGG | + | chr3_4:56957042-56957061 | Msa0508750:CDS | 40.0% | |
| CTATAAACCGAGCAAAGTCA+AGG | + | chr3_4:56957139-56957158 | Msa0508750:CDS | 40.0% | |
| ACCATCAAGAGATAGTGAGA+AGG | + | chr3_4:56957185-56957204 | Msa0508750:CDS | 40.0% | |
| TCCTTCTCACTATCTCTTGA+TGG | - | chr3_4:56957189-56957208 | None:intergenic | 40.0% | |
| AGAGATAGTGAGAAGGAGAA+TGG | + | chr3_4:56957192-56957211 | Msa0508750:CDS | 40.0% | |
| !! | ACATTTCTGGTCTGTCTATC+AGG | + | chr3_4:56957271-56957290 | Msa0508750:CDS | 40.0% |
| !! | CATTTCTGGTCTGTCTATCA+GGG | + | chr3_4:56957272-56957291 | Msa0508750:CDS | 40.0% |
| GCAACGAATCGTAATATTGG+AGG | + | chr3_4:56957384-56957403 | Msa0508750:CDS | 40.0% | |
| ! | AAGCTCATATCGCAGGTTTT+TGG | + | chr3_4:56957521-56957540 | Msa0508750:CDS | 40.0% |
| GATGGTAAATTAGTGGCAGT+TGG | + | chr3_4:56957633-56957652 | Msa0508750:CDS | 40.0% | |
| TGGTAAATTAGTGGCAGTTG+GGG | + | chr3_4:56957635-56957654 | Msa0508750:CDS | 40.0% | |
| AGTGATAGAAAGGCAAAGTC+TGG | - | chr3_4:56957711-56957730 | None:intergenic | 40.0% | |
| GACTTTGCCTTTCTATCACT+AGG | + | chr3_4:56957711-56957730 | Msa0508750:CDS | 40.0% | |
| GTACTTGCCTAGTGATAGAA+AGG | - | chr3_4:56957721-56957740 | None:intergenic | 40.0% | |
| CTGCTCTTCAAGAAATTGGT+TGG | + | chr3_4:56957742-56957761 | Msa0508750:CDS | 40.0% | |
| AAACTACAAGCATGGTGAAG+TGG | - | chr3_4:56957934-56957953 | None:intergenic | 40.0% | |
| ATCAATGAATGATCTCCAGG+TGG | + | chr3_4:56958198-56958217 | Msa0508750:intron | 40.0% | |
| TCAATGAATGATCTCCAGGT+GGG | + | chr3_4:56958199-56958218 | Msa0508750:intron | 40.0% | |
| AATGTCAAATGAAACCCACC+TGG | - | chr3_4:56958216-56958235 | None:intergenic | 40.0% | |
| GGGTTTCATTTGACATTGCA+AGG | + | chr3_4:56958219-56958238 | Msa0508750:CDS | 40.0% | |
| TAACGCTTTCTGTCAAGCAA+AGG | - | chr3_4:56958245-56958264 | None:intergenic | 40.0% | |
| ATCTTCAGCAACTTGAAGTG+GGG | - | chr3_4:56958312-56958331 | None:intergenic | 40.0% | |
| GATCTTCAGCAACTTGAAGT+GGG | - | chr3_4:56958313-56958332 | None:intergenic | 40.0% | |
| TGATCTTCAGCAACTTGAAG+TGG | - | chr3_4:56958314-56958333 | None:intergenic | 40.0% | |
| TCAAGACACTATGTTAAGCC+AGG | + | chr3_4:56958331-56958350 | Msa0508750:CDS | 40.0% | |
| !! | TTGCTGAAATCGCCATTTTC+TGG | - | chr3_4:56958491-56958510 | None:intergenic | 40.0% |
| TCATACCTTGTATCTCACAC+GGG | - | chr3_4:56958537-56958556 | None:intergenic | 40.0% | |
| CTTAAAGCACAGGAAGTAAC+TGG | - | chr3_4:56958583-56958602 | None:intergenic | 40.0% | |
| !! | AACATTTTCTAAGGATGGCC+AGG | - | chr3_4:56958608-56958627 | None:intergenic | 40.0% |
| !! | GTAATATCTTTTCGGGAGAC+GGG | - | chr3_4:56958739-56958758 | None:intergenic | 40.0% |
| !! | GGTAATATCTTTTCGGGAGA+CGG | - | chr3_4:56958740-56958759 | None:intergenic | 40.0% |
| AAAATATCGGTAAGTAGGGG+AGG | - | chr3_4:56958783-56958802 | None:intergenic | 40.0% | |
| TTATTTGGAGGTAACCGGAT+TGG | + | chr3_4:56958801-56958820 | Msa0508750:intron | 40.0% | |
| TATTTGGAGGTAACCGGATT+GGG | + | chr3_4:56958802-56958821 | Msa0508750:intron | 40.0% | |
| ACAACAAGTCAGACCAGAAT+GGG | - | chr3_4:56958962-56958981 | None:intergenic | 40.0% | |
| TCCTTCAGATATGAATAGCG+CGG | - | chr3_4:56959004-56959023 | None:intergenic | 40.0% | |
| AGTCACAGTTGCAGAAATAC+AGG | + | chr3_4:56959065-56959084 | Msa0508750:CDS | 40.0% | |
| ACAGTTGCAGAAATACAGGA+GGG | + | chr3_4:56959069-56959088 | Msa0508750:CDS | 40.0% | |
| ! | GGATACAGGATCTTATTTGC+TGG | - | chr3_4:56959188-56959207 | None:intergenic | 40.0% |
| TTTGATCCCCATTTGTCTCT+AGG | + | chr3_4:56959224-56959243 | Msa0508750:three_prime_UTR | 40.0% | |
| TGCCATTCCTAGAGACAAAT+GGG | - | chr3_4:56959234-56959253 | None:intergenic | 40.0% | |
| ATGCCATTCCTAGAGACAAA+TGG | - | chr3_4:56959235-56959254 | None:intergenic | 40.0% | |
| CCATATTCAGCAACTAATGC+TGG | - | chr3_4:56959387-56959406 | None:intergenic | 40.0% | |
| CCAGCATTAGTTGCTGAATA+TGG | + | chr3_4:56959384-56959403 | Msa0508750:three_prime_UTR | 40.0% | |
| GAAGAATGTCGAGTACGAAG+AGG | + | chr3_4:56953635-56953654 | Msa0508750:exon | 45.0% | |
| TAGCAGTAGCAAAACCCCAA+AGG | + | chr3_4:56953666-56953685 | Msa0508750:CDS | 45.0% | |
| AGCAACAACGCTTTCCTTTG+GGG | - | chr3_4:56953683-56953702 | None:intergenic | 45.0% | |
| CAGCAACAACGCTTTCCTTT+GGG | - | chr3_4:56953684-56953703 | None:intergenic | 45.0% | |
| TCAGCAACAACGCTTTCCTT+TGG | - | chr3_4:56953685-56953704 | None:intergenic | 45.0% | |
| !! | GAAAGCGTTGTTGCTGATTG+CGG | + | chr3_4:56953688-56953707 | Msa0508750:CDS | 45.0% |
| ! | TGGGTTGTTGTTGTAGTTGG+TGG | + | chr3_4:56953887-56953906 | Msa0508750:intron | 45.0% |
| ! | CATGCTGGCATATAGCCTTA+CGG | + | chr3_4:56954052-56954071 | Msa0508750:CDS | 45.0% |
| ! | CTTGGTAGTCATACACCGTA+AGG | - | chr3_4:56954070-56954089 | None:intergenic | 45.0% |
| CTTACGGTGTATGACTACCA+AGG | + | chr3_4:56954068-56954087 | Msa0508750:CDS | 45.0% | |
| TGTCCGACACGTATCCTATA+TGG | - | chr3_4:56954461-56954480 | None:intergenic | 45.0% | |
| CGATACTCTGCCAATACTCT+CGG | + | chr3_4:56954482-56954501 | Msa0508750:intron | 45.0% | |
| !! | ATGGATGATGGTAATGGGAG+AGG | + | chr3_4:56954764-56954783 | Msa0508750:intron | 45.0% |
| ! | AATGGGAGAGGAGACTCTTT+TGG | + | chr3_4:56954776-56954795 | Msa0508750:intron | 45.0% |
| ATCCGGGCTTCATAGACTAT+AGG | + | chr3_4:56955116-56955135 | Msa0508750:intron | 45.0% | |
| ! | CTGTTAGCTCTTCTTGATCG+GGG | + | chr3_4:56955481-56955500 | Msa0508750:intron | 45.0% |
| GATTGTATAGGAAGGGCAAC+AGG | - | chr3_4:56955554-56955573 | None:intergenic | 45.0% | |
| !! | ATGTGTCACTTCCTGGTGAA+TGG | + | chr3_4:56956287-56956306 | Msa0508750:intron | 45.0% |
| ! | TTGATGGCTAACCAGAGTCA+GGG | + | chr3_4:56956388-56956407 | Msa0508750:intron | 45.0% |
| CTTAAGACTTTCCCTGACTC+TGG | - | chr3_4:56956402-56956421 | None:intergenic | 45.0% | |
| CAGAGTCAGGGAAAGTCTTA+AGG | + | chr3_4:56956400-56956419 | Msa0508750:intron | 45.0% | |
| GAAGTCCTCACATAGTCACA+TGG | + | chr3_4:56956432-56956451 | Msa0508750:intron | 45.0% | |
| ! | GACTCGAACTCACATCCTTT+TGG | + | chr3_4:56956462-56956481 | Msa0508750:intron | 45.0% |
| ! | CGAGTTGAATACCTACCAAC+TGG | + | chr3_4:56956489-56956508 | Msa0508750:intron | 45.0% |
| CGAAAATTGGTCCAGTTGGT+AGG | - | chr3_4:56956503-56956522 | None:intergenic | 45.0% | |
| CCTACGAAAATTGGTCCAGT+TGG | - | chr3_4:56956507-56956526 | None:intergenic | 45.0% | |
| ! | CCAACTGGACCAATTTTCGT+AGG | + | chr3_4:56956504-56956523 | Msa0508750:intron | 45.0% |
| GTGGCAAAGCCTACGAAAAT+TGG | - | chr3_4:56956516-56956535 | None:intergenic | 45.0% | |
| ACCGATGGTTCTTTCTTCCT+AGG | + | chr3_4:56956770-56956789 | Msa0508750:intron | 45.0% | |
| !! | TGGAGCATGATGGGTTGTTA+TGG | - | chr3_4:56956876-56956895 | None:intergenic | 45.0% |
| CTTCTGACATGGAGCATGAT+GGG | - | chr3_4:56956885-56956904 | None:intergenic | 45.0% | |
| TCTTCTGACATGGAGCATGA+TGG | - | chr3_4:56956886-56956905 | None:intergenic | 45.0% | |
| GTGCACATGTTCACTGAGAA+CGG | + | chr3_4:56956985-56957004 | Msa0508750:CDS | 45.0% | |
| TGCACATGTTCACTGAGAAC+GGG | + | chr3_4:56956986-56957005 | Msa0508750:CDS | 45.0% | |
| CAGTCAGAATGGTTTCACAG+GGG | + | chr3_4:56957043-56957062 | Msa0508750:CDS | 45.0% | |
| GGTTTCACAGGGGAAAAAGA+AGG | + | chr3_4:56957053-56957072 | Msa0508750:CDS | 45.0% | |
| CGATTCGTTGCAGACTTCTT+TGG | - | chr3_4:56957375-56957394 | None:intergenic | 45.0% | |
| ACACAGAAAGCTCATATCGC+AGG | + | chr3_4:56957514-56957533 | Msa0508750:CDS | 45.0% | |
| GATAACACAGTTCCTCCTTG+TGG | + | chr3_4:56957579-56957598 | Msa0508750:CDS | 45.0% | |
| ! | ACAGTTCCTCCTTGTGGTTT+TGG | + | chr3_4:56957585-56957604 | Msa0508750:CDS | 45.0% |
| AAAGAGCCAAAACCACAAGG+AGG | - | chr3_4:56957594-56957613 | None:intergenic | 45.0% | |
| TGGAAAGAGCCAAAACCACA+AGG | - | chr3_4:56957597-56957616 | None:intergenic | 45.0% | |
| TGGTTGGGTGAAAGATAACC+AGG | + | chr3_4:56957758-56957777 | Msa0508750:CDS | 45.0% | |
| GTACTGGAGACTAGGACAAT+AGG | - | chr3_4:56957784-56957803 | None:intergenic | 45.0% | |
| !! | GAGGACATAGTAGCTCTGAA+GGG | - | chr3_4:56957866-56957885 | None:intergenic | 45.0% |
| !! | AGAGGACATAGTAGCTCTGA+AGG | - | chr3_4:56957867-56957886 | None:intergenic | 45.0% |
| !! | TTAAGCCAGGTTGATGACAG+TGG | + | chr3_4:56958344-56958363 | Msa0508750:CDS | 45.0% |
| ! | CTTCCTGTGCTTTAAGTTCC+TGG | + | chr3_4:56958587-56958606 | Msa0508750:intron | 45.0% |
| ATTTGGAGGTAACCGGATTG+GGG | + | chr3_4:56958803-56958822 | Msa0508750:intron | 45.0% | |
| CTCTATCACTATCCCCAATC+CGG | - | chr3_4:56958818-56958837 | None:intergenic | 45.0% | |
| GACAACAAGTCAGACCAGAA+TGG | - | chr3_4:56958963-56958982 | None:intergenic | 45.0% | |
| ACCGCGCTATTCATATCTGA+AGG | + | chr3_4:56959000-56959019 | Msa0508750:intron | 45.0% | |
| CACAGTTGCAGAAATACAGG+AGG | + | chr3_4:56959068-56959087 | Msa0508750:CDS | 45.0% | |
| CAGAAATACAGGAGGGTTGT+CGG | + | chr3_4:56959076-56959095 | Msa0508750:CDS | 45.0% | |
| ! | TCCCCATTTGTCTCTAGGAA+TGG | + | chr3_4:56959229-56959248 | Msa0508750:three_prime_UTR | 45.0% |
| GCCATTCCTAGAGACAAATG+GGG | - | chr3_4:56959233-56959252 | None:intergenic | 45.0% | |
| !! | AAAAGATATAATATATTTAA+GGG | - | chr3_4:56956066-56956085 | None:intergenic | 5.0% |
| !! | TAAAAGATATAATATATTTA+AGG | - | chr3_4:56956067-56956086 | None:intergenic | 5.0% |
| !!! | TTTTATTTTATAACAATTAT+TGG | + | chr3_4:56958013-56958032 | Msa0508750:intron | 5.0% |
| TGAGAGATGCTATTGGGACG+AGG | - | chr3_4:56953748-56953767 | None:intergenic | 50.0% | |
| CGTCCCAATAGCATCTCTCA+TGG | + | chr3_4:56953748-56953767 | Msa0508750:CDS | 50.0% | |
| CGGTGTATGACTACCAAGGT+TGG | + | chr3_4:56954072-56954091 | Msa0508750:intron | 50.0% | |
| CTGGGCTTCGTAGCCTATAA+TGG | - | chr3_4:56954415-56954434 | None:intergenic | 50.0% | |
| TCACACCCACACCATGTATC+CGG | + | chr3_4:56955099-56955118 | Msa0508750:intron | 50.0% | |
| GTCTATGAAGCCCGGATACA+TGG | - | chr3_4:56955113-56955132 | None:intergenic | 50.0% | |
| GGCCTATAGTCTATGAAGCC+CGG | - | chr3_4:56955121-56955140 | None:intergenic | 50.0% | |
| GGAAGTGACACATGTCCCAA+AGG | - | chr3_4:56956280-56956299 | None:intergenic | 50.0% | |
| !! | TTGGGACATGTGTCACTTCC+TGG | + | chr3_4:56956280-56956299 | Msa0508750:intron | 50.0% |
| ! | CTTGATGGCTAACCAGAGTC+AGG | + | chr3_4:56956387-56956406 | Msa0508750:intron | 50.0% |
| ACTGCCCATGTGACTATGTG+AGG | - | chr3_4:56956440-56956459 | None:intergenic | 50.0% | |
| GCACATGTTCACTGAGAACG+GGG | + | chr3_4:56956987-56957006 | Msa0508750:CDS | 50.0% | |
| GAGAACGGGGAATTTCCATC+TGG | + | chr3_4:56957000-56957019 | Msa0508750:CDS | 50.0% | |
| TAAGAGGTCTTCGGACCCAT+TGG | - | chr3_4:56957085-56957104 | None:intergenic | 50.0% | |
| CCTTGTCCCTTGACTTTGCT+CGG | - | chr3_4:56957149-56957168 | None:intergenic | 50.0% | |
| GCAAAGTCAAGGGACAAGGA+TGG | + | chr3_4:56957150-56957169 | Msa0508750:CDS | 50.0% | |
| CTGTCTATCAGGGCTTGCAA+TGG | + | chr3_4:56957282-56957301 | Msa0508750:CDS | 50.0% | |
| CTTGACCACTGTCATCAACC+TGG | - | chr3_4:56958352-56958371 | None:intergenic | 50.0% | |
| TGGCCAGGAACTTAAAGCAC+AGG | - | chr3_4:56958593-56958612 | None:intergenic | 50.0% | |
| ! | CGGATTGGGGATAGTGATAG+AGG | + | chr3_4:56958816-56958835 | Msa0508750:intron | 50.0% |
| TCGTGAGCAGCAGAGATACT+TGG | + | chr3_4:56959042-56959061 | Msa0508750:CDS | 50.0% | |
| TCCAGTGTTATCCGAGCGAA+TGG | + | chr3_4:56959099-56959118 | Msa0508750:CDS | 50.0% | |
| ACCATTCGCTCGGATAACAC+TGG | - | chr3_4:56959103-56959122 | None:intergenic | 50.0% | |
| GAGAGAGTAGACCATTCGCT+CGG | - | chr3_4:56959113-56959132 | None:intergenic | 50.0% | |
| GAGCGAATGGTCTACTCTCT+CGG | + | chr3_4:56959112-56959131 | Msa0508750:CDS | 50.0% | |
| AAGATCCTGTATCCAGCAGC+TGG | + | chr3_4:56959194-56959213 | Msa0508750:three_prime_UTR | 50.0% | |
| TCAAATTCAGCTCCAGCTGC+TGG | - | chr3_4:56959209-56959228 | None:intergenic | 50.0% | |
| !! | GGAAAGCGTCGAAGCTCTTG+TGG | + | chr3_4:56953709-56953728 | Msa0508750:CDS | 55.0% |
| CACACCCACACCATGTATCC+GGG | + | chr3_4:56955100-56955119 | Msa0508750:intron | 55.0% | |
| GAAGCCCGGATACATGGTGT+GGG | - | chr3_4:56955107-56955126 | None:intergenic | 55.0% | |
| TGAAGCCCGGATACATGGTG+TGG | - | chr3_4:56955108-56955127 | None:intergenic | 55.0% | |
| !! | GCCTGACTCGGTCGTTAACT+CGG | - | chr3_4:56955142-56955161 | None:intergenic | 55.0% |
| ! | CTTTGAAGGGGGGGGAAGTT+AGG | - | chr3_4:56955218-56955237 | None:intergenic | 55.0% |
| TAGCTCTTCTTGATCGGGGC+TGG | + | chr3_4:56955485-56955504 | Msa0508750:intron | 55.0% | |
| CCGAGCAAAGTCAAGGGACA+AGG | + | chr3_4:56957146-56957165 | Msa0508750:CDS | 55.0% | |
| GGAGACTAGGACAATAGGCC+TGG | - | chr3_4:56957779-56957798 | None:intergenic | 55.0% | |
| GGGATCCCGTGTGAGATACA+AGG | + | chr3_4:56958529-56958548 | Msa0508750:CDS | 55.0% | |
| ! | CGGGAGACGGGAGTATGAAA+AGG | - | chr3_4:56958727-56958746 | None:intergenic | 55.0% |
| GCCGAGTTAACGACCGAGTC+AGG | + | chr3_4:56955138-56955157 | Msa0508750:intron | 60.0% | |
| GATCGGGGCTGGAGAAGATC+TGG | + | chr3_4:56955496-56955515 | Msa0508750:CDS | 60.0% | |
| CAGCTCCAGCTGCTGGATAC+AGG | - | chr3_4:56959202-56959221 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 56953421 | 56959494 | 56953421 | ID=Msa0508750;Name=Msa0508750 |
| chr3_4 | mRNA | 56953421 | 56959494 | 56953421 | ID=Msa0508750-mRNA-1;Parent=Msa0508750;Name=Msa0508750-mRNA-1;_AED=0.01;_eAED=0.01;_QI=219|1|1|1|1|1|6|356|624 |
| chr3_4 | exon | 56953421 | 56953769 | 56953421 | ID=Msa0508750-mRNA-1:exon:12885;Parent=Msa0508750-mRNA-1 |
| chr3_4 | exon | 56954051 | 56954089 | 56954051 | ID=Msa0508750-mRNA-1:exon:12886;Parent=Msa0508750-mRNA-1 |
| chr3_4 | exon | 56955488 | 56955638 | 56955488 | ID=Msa0508750-mRNA-1:exon:12887;Parent=Msa0508750-mRNA-1 |
| chr3_4 | exon | 56956792 | 56957895 | 56956792 | ID=Msa0508750-mRNA-1:exon:12888;Parent=Msa0508750-mRNA-1 |
| chr3_4 | exon | 56958217 | 56958550 | 56958217 | ID=Msa0508750-mRNA-1:exon:12889;Parent=Msa0508750-mRNA-1 |
| chr3_4 | exon | 56959022 | 56959494 | 56959022 | ID=Msa0508750-mRNA-1:exon:12890;Parent=Msa0508750-mRNA-1 |
| chr3_4 | five_prime_UTR | 56953421 | 56953639 | 56953421 | ID=Msa0508750-mRNA-1:five_prime_utr;Parent=Msa0508750-mRNA-1 |
| chr3_4 | CDS | 56953640 | 56953769 | 56953640 | ID=Msa0508750-mRNA-1:cds;Parent=Msa0508750-mRNA-1 |
| chr3_4 | CDS | 56954051 | 56954089 | 56954051 | ID=Msa0508750-mRNA-1:cds;Parent=Msa0508750-mRNA-1 |
| chr3_4 | CDS | 56955488 | 56955638 | 56955488 | ID=Msa0508750-mRNA-1:cds;Parent=Msa0508750-mRNA-1 |
| chr3_4 | CDS | 56956792 | 56957895 | 56956792 | ID=Msa0508750-mRNA-1:cds;Parent=Msa0508750-mRNA-1 |
| chr3_4 | CDS | 56958217 | 56958550 | 56958217 | ID=Msa0508750-mRNA-1:cds;Parent=Msa0508750-mRNA-1 |
| chr3_4 | CDS | 56959022 | 56959138 | 56959022 | ID=Msa0508750-mRNA-1:cds;Parent=Msa0508750-mRNA-1 |
| chr3_4 | three_prime_UTR | 56959139 | 56959494 | 56959139 | ID=Msa0508750-mRNA-1:three_prime_utr;Parent=Msa0508750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
