Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0372000 | XP_003600872.1 | 95.833 | 360 | 13 | 1 | 1 | 358 | 1 | 360 | 0.0 | 704 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0372000 | sp|Q9C776|ATE2_ARATH | 49.589 | 365 | 160 | 6 | 1 | 356 | 1 | 350 | 3.71e-110 | 337 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0372000 | G7JB71 | 95.833 | 360 | 13 | 1 | 1 | 358 | 1 | 360 | 0.0 | 704 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0138680 | Msa0372000 | -0.809488 | 1.845754e-50 | -8.615850e-47 |
| Msa0372000 | Msa0416510 | 0.900260 | 8.753750e-78 | -8.615850e-47 |
| Msa0372000 | Msa0437270 | 0.945000 | 6.913029e-104 | -8.615850e-47 |
| Msa0372000 | Msa0508750 | 0.813961 | 1.963902e-51 | -8.615850e-47 |
| Msa0372000 | Msa1133690 | 0.819465 | 1.144873e-52 | -8.615850e-47 |
| Msa0372000 | Msa1159160 | 0.825744 | 3.966473e-54 | -8.615850e-47 |
| Msa0372000 | Msa1164720 | -0.810115 | 1.352911e-50 | -8.615850e-47 |
| Msa0372000 | Msa1363820 | -0.823016 | 1.737757e-53 | -8.615850e-47 |
| Msa0349470 | Msa0372000 | 0.932450 | 8.360347e-95 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0372000 | MtrunA17_Chr3g0113281 | 95.833 | 360 | 13 | 1 | 1 | 358 | 1 | 360 | 0.0 | 704 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0372000 | AT3G11240.1 | 49.589 | 365 | 160 | 6 | 1 | 356 | 1 | 350 | 3.77e-111 | 337 |
| Msa0372000 | AT5G05700.1 | 48.108 | 370 | 160 | 7 | 6 | 358 | 4 | 358 | 1.09e-105 | 323 |
| Msa0372000 | AT3G11240.3 | 48.580 | 317 | 144 | 4 | 44 | 356 | 6 | 307 | 1.89e-94 | 293 |
| Msa0372000 | AT5G05700.2 | 44.631 | 298 | 136 | 6 | 75 | 358 | 1 | 283 | 2.66e-70 | 229 |
| Msa0372000 | AT3G11240.4 | 44.444 | 198 | 99 | 2 | 164 | 358 | 4 | 193 | 6.22e-50 | 173 |
| Msa0372000 | AT3G11240.2 | 44.444 | 198 | 99 | 2 | 164 | 358 | 4 | 193 | 6.22e-50 | 173 |
| Msa0372000 | AT3G11240.5 | 44.444 | 198 | 99 | 2 | 164 | 358 | 4 | 193 | 6.22e-50 | 173 |
Find 158 sgRNAs with CRISPR-Local
Find 404 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGAATTGTTTGAAGTATT+TGG | 0.169517 | 3_1:+70290028 | None:intergenic |
| GATTCAACAGTGAACATTTC+TGG | 0.176607 | 3_1:-70289611 | Msa0372000:CDS |
| TACTCTGCTCTTCAAGAAAT+TGG | 0.199151 | 3_1:-70289132 | Msa0372000:three_prime_UTR |
| TTCTTGTGCATTTGCATATA+CGG | 0.212102 | 3_1:-70287549 | Msa0372000:three_prime_UTR |
| ACTCGACATTCTTCAATTTC+GGG | 0.215652 | 3_1:+70293248 | None:intergenic |
| CCAGCATTAGTTGCTGAATA+TGG | 0.218419 | 3_1:-70287498 | Msa0372000:three_prime_UTR |
| TTCAGAAGAGATGAAAATTT+AGG | 0.221231 | 3_1:+70293271 | None:intergenic |
| ATATACGGAATTTAATTTAA+TGG | 0.222822 | 3_1:-70287534 | Msa0372000:three_prime_UTR |
| CTATATAAAGCATATTCTTC+TGG | 0.228134 | 3_1:+70289419 | None:intergenic |
| TACTCGACATTCTTCAATTT+CGG | 0.228850 | 3_1:+70293247 | None:intergenic |
| CGATTCGTTGCAGACTTCTT+TGG | 0.247968 | 3_1:+70289497 | None:intergenic |
| TCCTTCTCACTATCTCTTGA+TGG | 0.258555 | 3_1:+70289683 | None:intergenic |
| ACAGTTCCTCCTTGTGGTTT+TGG | 0.260938 | 3_1:-70289285 | Msa0372000:three_prime_UTR |
| TATCGAGTAAATATTTGTTC+TGG | 0.263562 | 3_1:-70289188 | Msa0372000:three_prime_UTR |
| CAGCAACAACGCTTTCCTTT+GGG | 0.269424 | 3_1:+70293193 | None:intergenic |
| TTTGAAGTAGTTTCTATATC+AGG | 0.274161 | 3_1:+70288423 | None:intergenic |
| ACATTTCTGGTCTGTCTATC+AGG | 0.275790 | 3_1:-70289598 | Msa0372000:CDS |
| TGTTCGATCTTCTCTTTGAT+TGG | 0.287769 | 3_1:+70293297 | None:intergenic |
| TCAGAAGAGATGAAAATTTA+GGG | 0.303811 | 3_1:+70293272 | None:intergenic |
| AAAGCTCATATCGCAGGTTT+TGG | 0.310637 | 3_1:-70289349 | Msa0372000:CDS |
| AAGTGACTTTGTTCCCTCTA+AGG | 0.312760 | 3_1:-70291285 | Msa0372000:CDS |
| TCAAATGGTGAACCAGAAAA+TGG | 0.316117 | 3_1:-70288405 | Msa0372000:three_prime_UTR |
| GTATGTGAAACATATATTAA+TGG | 0.338861 | 3_1:+70289318 | None:intergenic |
| AAGGATCTGCAAAGTGTATT+TGG | 0.341290 | 3_1:-70287863 | Msa0372000:three_prime_UTR |
| TTTCCATCAACAGTATTTAG+TGG | 0.347193 | 3_1:-70289259 | Msa0372000:three_prime_UTR |
| TCGGACTTAAATATTGATAT+AGG | 0.347773 | 3_1:+70293464 | None:intergenic |
| ACCATTCTGACTGAAGCTTT+TGG | 0.357966 | 3_1:+70289836 | None:intergenic |
| CCTTGTCCCTTGACTTTGCT+CGG | 0.359889 | 3_1:+70289723 | None:intergenic |
| TCAGCAACAACGCTTTCCTT+TGG | 0.361381 | 3_1:+70293192 | None:intergenic |
| TTCTGTTAGCTCTTCTTGAT+CGG | 0.362879 | 3_1:-70291391 | Msa0372000:intron |
| CATCCACTAAATACTGTTGA+TGG | 0.367065 | 3_1:+70289256 | None:intergenic |
| TTAATATATGTTTCACATAC+TGG | 0.367295 | 3_1:-70289315 | Msa0372000:exon |
| TCTGTTAGCTCTTCTTGATC+GGG | 0.371855 | 3_1:-70291390 | Msa0372000:intron |
| TACACGAAGTTGTTCCTTAG+AGG | 0.382550 | 3_1:+70291271 | None:intergenic |
| ATCGAGTAAATATTTGTTCT+GGG | 0.383663 | 3_1:-70289187 | Msa0372000:three_prime_UTR |
| TCTGCAACGAATCGTAATAT+TGG | 0.392297 | 3_1:-70289488 | Msa0372000:CDS |
| AGAAATGGTTGAATCTGAAT+TGG | 0.392690 | 3_1:-70288463 | Msa0372000:three_prime_UTR |
| ATGGTAAATTAGTGGCAGTT+GGG | 0.392810 | 3_1:-70289236 | Msa0372000:three_prime_UTR |
| CAGCTCCAGCTGCTGGATAC+AGG | 0.400677 | 3_1:+70287683 | None:intergenic |
| TAGCTCTTCTTGATCGGGGC+TGG | 0.413747 | 3_1:-70291385 | Msa0372000:CDS |
| ATATTCTTCTGGATCAAAAC+TGG | 0.414826 | 3_1:+70289430 | None:intergenic |
| TGCACATGTTCACTGAGAAC+GGG | 0.420815 | 3_1:-70289883 | Msa0372000:CDS |
| GGATACAGGATCTTATTTGC+TGG | 0.421600 | 3_1:+70287697 | None:intergenic |
| TCATCTTCATCTTCATGCAT+TGG | 0.426710 | 3_1:+70288498 | None:intergenic |
| TGCCATTCCTAGAGACAAAT+GGG | 0.431593 | 3_1:+70287651 | None:intergenic |
| TTTGATCCCCATTTGTCTCT+AGG | 0.433714 | 3_1:-70287658 | Msa0372000:three_prime_UTR |
| AGAGATAGTGAGAAGGAGAA+TGG | 0.437181 | 3_1:-70289677 | Msa0372000:CDS |
| GATCGGGGCTGGAGAAGATC+TGG | 0.437268 | 3_1:-70291374 | Msa0372000:CDS |
| TATTTACTCGATAAACAGTT+AGG | 0.441413 | 3_1:+70289198 | None:intergenic |
| GTACTGGAGACTAGGACAAT+AGG | 0.443698 | 3_1:+70289089 | None:intergenic |
| TGCTCTTCAAGAAATTGGTT+GGG | 0.445508 | 3_1:-70289127 | Msa0372000:three_prime_UTR |
| GAACCATGAGAGATGCTATT+GGG | 0.446557 | 3_1:+70293123 | None:intergenic |
| ACTGAACAATGAATTGAAAT+CGG | 0.447578 | 3_1:-70293327 | Msa0372000:five_prime_UTR |
| GATACAGGATCTTATTTGCT+GGG | 0.448971 | 3_1:+70287698 | None:intergenic |
| TTTAGTGGATGGTAAATTAG+TGG | 0.451470 | 3_1:-70289244 | Msa0372000:three_prime_UTR |
| TGAAGATGAAGATGAAGAAA+TGG | 0.451588 | 3_1:-70288478 | Msa0372000:three_prime_UTR |
| TCAAATTCAGCTCCAGCTGC+TGG | 0.453356 | 3_1:+70287676 | None:intergenic |
| TGCTTTCAAGCGGATTGTAT+AGG | 0.453379 | 3_1:+70291307 | None:intergenic |
| GATATAGAAACTACTTCAAA+TGG | 0.453880 | 3_1:-70288420 | Msa0372000:three_prime_UTR |
| ACCAAAAGCTTCAGTCAGAA+TGG | 0.453937 | 3_1:-70289837 | Msa0372000:CDS |
| AGTCTCCAGTACTATTATCT+TGG | 0.457037 | 3_1:-70289078 | Msa0372000:three_prime_UTR |
| ATGCCATTCCTAGAGACAAA+TGG | 0.457435 | 3_1:+70287650 | None:intergenic |
| TGAACCATGAGAGATGCTAT+TGG | 0.459034 | 3_1:+70293122 | None:intergenic |
| TTTCTTTGTTACAGGCATGC+TGG | 0.460312 | 3_1:-70292839 | Msa0372000:intron |
| AGTGATAGAAAGGCAAAGTC+TGG | 0.460759 | 3_1:+70289162 | None:intergenic |
| CTGCTCTTCAAGAAATTGGT+TGG | 0.462545 | 3_1:-70289128 | Msa0372000:three_prime_UTR |
| TGGAGCATGATGGGTTGTTA+TGG | 0.468006 | 3_1:+70289996 | None:intergenic |
| ATAGAACATAAAATTGATTG+AGG | 0.477237 | 3_1:+70287414 | None:intergenic |
| TTCAGTCAGAATGGTTTCAC+AGG | 0.478971 | 3_1:-70289828 | Msa0372000:CDS |
| GATTGTATAGGAAGGGCAAC+AGG | 0.478971 | 3_1:+70291319 | None:intergenic |
| GGGTTTCATTTGACATTGCA+AGG | 0.480080 | 3_1:-70288668 | Msa0372000:three_prime_UTR |
| CATCAACAGTATTTAGTGGA+TGG | 0.481200 | 3_1:-70289255 | Msa0372000:three_prime_UTR |
| TAAAACTATTGCAGAAAAGC+TGG | 0.482141 | 3_1:-70289645 | Msa0372000:CDS |
| CAGAAATACAGGAGGGTTGT+CGG | 0.488102 | 3_1:-70287806 | Msa0372000:three_prime_UTR |
| CATTTCTGGTCTGTCTATCA+GGG | 0.490558 | 3_1:-70289597 | Msa0372000:CDS |
| TGATCTTCAGCAACTTGAAG+TGG | 0.497795 | 3_1:+70288576 | None:intergenic |
| AGTAGCCAAGATAATAGTAC+TGG | 0.499159 | 3_1:+70289073 | None:intergenic |
| TGAAGTATTTGGTTCCTCCA+TGG | 0.500622 | 3_1:+70290039 | None:intergenic |
| AGTCACAGTTGCAGAAATAC+AGG | 0.501911 | 3_1:-70287817 | Msa0372000:three_prime_UTR |
| AAGATCCTGTATCCAGCAGC+TGG | 0.502219 | 3_1:-70287688 | Msa0372000:three_prime_UTR |
| GATGGTAAATTAGTGGCAGT+TGG | 0.505487 | 3_1:-70289237 | Msa0372000:three_prime_UTR |
| CCATATTCAGCAACTAATGC+TGG | 0.513454 | 3_1:+70287498 | None:intergenic |
| GATCTTCAGCAACTTGAAGT+GGG | 0.518193 | 3_1:+70288577 | None:intergenic |
| TCTTCTGACATGGAGCATGA+TGG | 0.520063 | 3_1:+70289986 | None:intergenic |
| TCGTGAGCAGCAGAGATACT+TGG | 0.521603 | 3_1:-70287840 | Msa0372000:three_prime_UTR |
| GTACTTGCCTAGTGATAGAA+AGG | 0.522687 | 3_1:+70289152 | None:intergenic |
| AAAAGAAGGTATTAGCCAAT+GGG | 0.524221 | 3_1:-70289802 | Msa0372000:CDS |
| TATAGATGCAGCAACTTGAA+AGG | 0.525347 | 3_1:+70289748 | None:intergenic |
| TCCCCATTTGTCTCTAGGAA+TGG | 0.525816 | 3_1:-70287653 | Msa0372000:three_prime_UTR |
| GCTACTATATAAGAGGTCTT+CGG | 0.526478 | 3_1:+70289778 | None:intergenic |
| CTTGACCACTGTCATCAACC+TGG | 0.528218 | 3_1:+70288538 | None:intergenic |
| CTTCTGACATGGAGCATGAT+GGG | 0.528703 | 3_1:+70289987 | None:intergenic |
| TTTGGTAATTGAATACCAGA+TGG | 0.531867 | 3_1:+70289854 | None:intergenic |
| CTATATTGCTACTATATAAG+AGG | 0.536144 | 3_1:+70289771 | None:intergenic |
| AGAGGACATAGTAGCTCTGA+AGG | 0.537283 | 3_1:+70289006 | None:intergenic |
| TCTATCTGTTAGCAATAAAG+AGG | 0.539337 | 3_1:-70289960 | Msa0372000:CDS |
| TAAGAGGTCTTCGGACCCAT+TGG | 0.540930 | 3_1:+70289787 | None:intergenic |
| TCAAGACACTATGTTAAGCC+AGG | 0.546489 | 3_1:-70288556 | Msa0372000:three_prime_UTR |
| TGGTAAATTAGTGGCAGTTG+GGG | 0.548028 | 3_1:-70289235 | Msa0372000:three_prime_UTR |
| CAAAGTCACTTGCTTTCAAG+CGG | 0.550013 | 3_1:+70291297 | None:intergenic |
| GAGCGAATGGTCTACTCTCT+CGG | 0.557386 | 3_1:-70287770 | Msa0372000:three_prime_UTR |
| TTCAAGCGGATTGTATAGGA+AGG | 0.557510 | 3_1:+70291311 | None:intergenic |
| GCAACGAATCGTAATATTGG+AGG | 0.558170 | 3_1:-70289485 | Msa0372000:CDS |
| ACACAGAAAGCTCATATCGC+AGG | 0.558720 | 3_1:-70289355 | Msa0372000:CDS |
| CACTGCATTATCAATCTGAT+CGG | 0.558763 | 3_1:+70289904 | None:intergenic |
| GAGAACGGGGAATTTCCATC+TGG | 0.560903 | 3_1:-70289869 | Msa0372000:CDS |
| GTGCACATGTTCACTGAGAA+CGG | 0.561725 | 3_1:-70289884 | Msa0372000:CDS |
| CTGTCTATCAGGGCTTGCAA+TGG | 0.562657 | 3_1:-70289587 | Msa0372000:CDS |
| TCTTAGTTGAAGCATCAAGT+TGG | 0.565198 | 3_1:-70287453 | Msa0372000:three_prime_UTR |
| TCCAGTGTTATCCGAGCGAA+TGG | 0.566865 | 3_1:-70287783 | Msa0372000:three_prime_UTR |
| ACACGAAGTTGTTCCTTAGA+GGG | 0.574435 | 3_1:+70291272 | None:intergenic |
| AGATAATAGTACTGGAGACT+AGG | 0.577677 | 3_1:+70289081 | None:intergenic |
| CATGCTGGCATATAGCCTTA+CGG | 0.578182 | 3_1:-70292824 | Msa0372000:CDS |
| CTGTTAGCTCTTCTTGATCG+GGG | 0.579685 | 3_1:-70291389 | Msa0372000:intron |
| GGAAAGCGTCGAAGCTCTTG+TGG | 0.580414 | 3_1:-70293165 | Msa0372000:CDS |
| GACTTTGCCTTTCTATCACT+AGG | 0.581918 | 3_1:-70289159 | Msa0372000:three_prime_UTR |
| AGCAACAACGCTTTCCTTTG+GGG | 0.582980 | 3_1:+70293194 | None:intergenic |
| CTATAAACCGAGCAAAGTCA+AGG | 0.583219 | 3_1:-70289730 | Msa0372000:CDS |
| GAAAGCGTTGTTGCTGATTG+CGG | 0.585631 | 3_1:-70293186 | Msa0372000:CDS |
| GGAGACTAGGACAATAGGCC+TGG | 0.586272 | 3_1:+70289094 | None:intergenic |
| TCTCTCGGTTAATTATATCT+CGG | 0.586725 | 3_1:-70287755 | Msa0372000:three_prime_UTR |
| CTTGGTAGTCATACACCGTA+AGG | 0.588665 | 3_1:+70292809 | None:intergenic |
| ATCTGTTAGCAATAAAGAGG+TGG | 0.589633 | 3_1:-70289957 | Msa0372000:CDS |
| CCGAGCAAAGTCAAGGGACA+AGG | 0.590380 | 3_1:-70289723 | Msa0372000:CDS |
| ACCATCAAGAGATAGTGAGA+AGG | 0.595095 | 3_1:-70289684 | Msa0372000:CDS |
| GATAACACAGTTCCTCCTTG+TGG | 0.595810 | 3_1:-70289291 | Msa0372000:three_prime_UTR |
| CGTCCCAATAGCATCTCTCA+TGG | 0.596130 | 3_1:-70293126 | Msa0372000:intron |
| GGGATCCCGTGTGAGATACA+AGG | 0.598121 | 3_1:-70288352 | Msa0372000:intron |
| AGATAGAGATTCTTCTGACA+TGG | 0.604313 | 3_1:+70289976 | None:intergenic |
| ATCTTCAGCAACTTGAAGTG+GGG | 0.605213 | 3_1:+70288578 | None:intergenic |
| ATCATACCTTGTATCTCACA+CGG | 0.611139 | 3_1:+70288346 | None:intergenic |
| ATGATGGGTTGTTATGGACA+AGG | 0.611276 | 3_1:+70290002 | None:intergenic |
| TGAGAGATGCTATTGGGACG+AGG | 0.618053 | 3_1:+70293129 | None:intergenic |
| TCAGTCAGAATGGTTTCACA+GGG | 0.619527 | 3_1:-70289827 | Msa0372000:CDS |
| TAACGCTTTCTGTCAAGCAA+AGG | 0.626789 | 3_1:+70288645 | None:intergenic |
| ACCATTCGCTCGGATAACAC+TGG | 0.627386 | 3_1:+70287782 | None:intergenic |
| GCAAAGTCAAGGGACAAGGA+TGG | 0.632318 | 3_1:-70289719 | Msa0372000:CDS |
| GAAGAATGTCGAGTACGAAG+AGG | 0.633268 | 3_1:-70293239 | Msa0372000:exon |
| TATAAACCGAGCAAAGTCAA+GGG | 0.634803 | 3_1:-70289729 | Msa0372000:CDS |
| CACAGTTGCAGAAATACAGG+AGG | 0.636902 | 3_1:-70287814 | Msa0372000:three_prime_UTR |
| ATACAGGATCTTATTTGCTG+GGG | 0.638032 | 3_1:+70287699 | None:intergenic |
| TCAAGCGGATTGTATAGGAA+GGG | 0.647018 | 3_1:+70291312 | None:intergenic |
| TGGAAAGAGCCAAAACCACA+AGG | 0.651081 | 3_1:+70289276 | None:intergenic |
| TAGCAGTAGCAAAACCCCAA+AGG | 0.653048 | 3_1:-70293208 | Msa0372000:CDS |
| TTAACTTACTGATAGCGAAG+AGG | 0.662453 | 3_1:+70288988 | None:intergenic |
| GAGAGAGTAGACCATTCGCT+CGG | 0.668897 | 3_1:+70287772 | None:intergenic |
| TGTTAAAAGAGTTGATGCCA+TGG | 0.669144 | 3_1:-70290056 | Msa0372000:CDS |
| GTGTATCTAGACGAATGCAA+AGG | 0.675511 | 3_1:-70291253 | Msa0372000:intron |
| TAAAAGAGTTGATGCCATGG+AGG | 0.680258 | 3_1:-70290053 | Msa0372000:CDS |
| TCATACCTTGTATCTCACAC+GGG | 0.681061 | 3_1:+70288347 | None:intergenic |
| GAGGACATAGTAGCTCTGAA+GGG | 0.681722 | 3_1:+70289007 | None:intergenic |
| GCACATGTTCACTGAGAACG+GGG | 0.681833 | 3_1:-70289882 | Msa0372000:CDS |
| TTAAGCCAGGTTGATGACAG+TGG | 0.699199 | 3_1:-70288543 | Msa0372000:three_prime_UTR |
| CTTACGGTGTATGACTACCA+AGG | 0.718339 | 3_1:-70292808 | Msa0372000:intron |
| GCCATTCCTAGAGACAAATG+GGG | 0.718410 | 3_1:+70287652 | None:intergenic |
| ACAGTTGCAGAAATACAGGA+GGG | 0.725694 | 3_1:-70287813 | Msa0372000:three_prime_UTR |
| AAAGAGCCAAAACCACAAGG+AGG | 0.739577 | 3_1:+70289279 | None:intergenic |
| CAGTCAGAATGGTTTCACAG+GGG | 0.766259 | 3_1:-70289826 | Msa0372000:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTAAAATATATATTTTAT+AGG | - | chr3_1:70288563-70288582 | Msa0372000:three_prime_UTR | 0.0% |
| !! | TTAATTATAAATAAAAAAAA+TGG | + | chr3_1:70290560-70290579 | None:intergenic | 0.0% |
| !!! | TAAAATTCATGTTTTTTTTA+TGG | - | chr3_1:70288760-70288779 | Msa0372000:intron | 10.0% |
| !! | ATTATAAATAAAAAAAATGG+TGG | + | chr3_1:70290557-70290576 | None:intergenic | 10.0% |
| !! | TTGAAAAACAATAAATTTGT+CGG | + | chr3_1:70287450-70287469 | None:intergenic | 15.0% |
| !!! | TTTGAATTCTTTTCTTTTTT+TGG | + | chr3_1:70287534-70287553 | None:intergenic | 15.0% |
| !!! | AAAACCAAAACTTTTTTATT+GGG | + | chr3_1:70287869-70287888 | None:intergenic | 15.0% |
| !!! | AAAAACCAAAACTTTTTTAT+TGG | + | chr3_1:70287870-70287889 | None:intergenic | 15.0% |
| !! | AAAAAAAAAGAATTTCTTAC+TGG | - | chr3_1:70287954-70287973 | Msa0372000:intron | 15.0% |
| !! | AAAAAAAAGAATTTCTTACT+GGG | - | chr3_1:70287955-70287974 | Msa0372000:intron | 15.0% |
| !!! | AAGTAATTATGATACTTTTA+TGG | + | chr3_1:70288537-70288556 | None:intergenic | 15.0% |
| !!! | ACTTTTGATTTTTAAATTGA+TGG | - | chr3_1:70289697-70289716 | Msa0372000:CDS | 15.0% |
| !! | ATGAAAATTGTAACATATAA+AGG | + | chr3_1:70289946-70289965 | None:intergenic | 15.0% |
| !!! | TTTTTGAATAGTAACATTTT+GGG | + | chr3_1:70291366-70291385 | None:intergenic | 15.0% |
| !!! | ATATACGGAATTTAATTTAA+TGG | - | chr3_1:70293358-70293377 | Msa0372000:five_prime_UTR | 15.0% |
| !!! | ATTCTTTTCTTTTTTTGGAA+TGG | + | chr3_1:70287529-70287548 | None:intergenic | 20.0% |
| !! | AAACAAATTCAACGAAATTA+GGG | + | chr3_1:70287814-70287833 | None:intergenic | 20.0% |
| !!! | AAAACCCAATAAAAAAGTTT+TGG | - | chr3_1:70287862-70287881 | Msa0372000:three_prime_UTR | 20.0% |
| !!! | TTTCTTTTTTTCTTTGTTAC+AGG | - | chr3_1:70288045-70288064 | Msa0372000:intron | 20.0% |
| !! | TATAAAAAAAAGTTGAGACA+AGG | - | chr3_1:70288646-70288665 | Msa0372000:three_prime_UTR | 20.0% |
| !!! | AAAAACATGAATTTTAAGTC+TGG | + | chr3_1:70288756-70288775 | None:intergenic | 20.0% |
| !!! | ACGTAAAGTTTTTGAAATTT+AGG | + | chr3_1:70289068-70289087 | None:intergenic | 20.0% |
| !!! | TGGAACTTTTATTTATAAAC+CGG | - | chr3_1:70289538-70289557 | Msa0372000:CDS | 20.0% |
| !!! | CTTTTTGAATAGTAACATTT+TGG | + | chr3_1:70291367-70291386 | None:intergenic | 20.0% |
| !! | GTATGTGAAACATATATTAA+TGG | + | chr3_1:70291577-70291596 | None:intergenic | 20.0% |
| !! | TTAATATATGTTTCACATAC+TGG | - | chr3_1:70291577-70291596 | Msa0372000:intron | 20.0% |
| !! | GTTAACATTATCTATTTCAT+AGG | + | chr3_1:70292067-70292086 | None:intergenic | 20.0% |
| !! | AAATAAAATATCGGTAAGTA+GGG | + | chr3_1:70292797-70292816 | None:intergenic | 20.0% |
| !!! | ATTATGTGAACTTAAGTTTT+TGG | - | chr3_1:70293276-70293295 | Msa0372000:five_prime_UTR | 20.0% |
| !! | ATAGAACATAAAATTGATTG+AGG | + | chr3_1:70293481-70293500 | None:intergenic | 20.0% |
| ! | TCGGACTTAAATATTGATAT+AGG | + | chr3_1:70287431-70287450 | None:intergenic | 25.0% |
| ! | ACTGAACAATGAATTGAAAT+CGG | - | chr3_1:70287565-70287584 | Msa0372000:three_prime_UTR | 25.0% |
| ! | TCAGAAGAGATGAAAATTTA+GGG | + | chr3_1:70287623-70287642 | None:intergenic | 25.0% |
| ! | TTCAGAAGAGATGAAAATTT+AGG | + | chr3_1:70287624-70287643 | None:intergenic | 25.0% |
| ! | AACAAATTCAACGAAATTAG+GGG | + | chr3_1:70287813-70287832 | None:intergenic | 25.0% |
| ! | CAAACAAATTCAACGAAATT+AGG | + | chr3_1:70287815-70287834 | None:intergenic | 25.0% |
| !! | AATTTCGTTGAATTTGTTTG+CGG | - | chr3_1:70287815-70287834 | Msa0372000:three_prime_UTR | 25.0% |
| !!! | TTTTTAACTGAAACGTGAAT+TGG | - | chr3_1:70287885-70287904 | Msa0372000:intron | 25.0% |
| !!! | TTTTAACTGAAACGTGAATT+GGG | - | chr3_1:70287886-70287905 | Msa0372000:intron | 25.0% |
| !!! | CATGTTTTTTTTATGGATGA+TGG | - | chr3_1:70288767-70288786 | Msa0372000:intron | 25.0% |
| !!! | TTTTTTATGGATGATGGTAA+TGG | - | chr3_1:70288773-70288792 | Msa0372000:intron | 25.0% |
| !!! | TTTTTATGGATGATGGTAAT+GGG | - | chr3_1:70288774-70288793 | Msa0372000:intron | 25.0% |
| !! | TTTTGTTGATATCCTAACAT+AGG | - | chr3_1:70288856-70288875 | Msa0372000:intron | 25.0% |
| ! | TTTGTTGATATCCTAACATA+GGG | - | chr3_1:70288857-70288876 | Msa0372000:intron | 25.0% |
| !! | TAAGTAAAGATTCTTTGAAG+GGG | + | chr3_1:70289252-70289271 | None:intergenic | 25.0% |
| ! | CTAAGTAAAGATTCTTTGAA+GGG | + | chr3_1:70289253-70289272 | None:intergenic | 25.0% |
| ! | TCTAAGTAAAGATTCTTTGA+AGG | + | chr3_1:70289254-70289273 | None:intergenic | 25.0% |
| !!! | TTTTATTTATAAACCGGAGA+TGG | - | chr3_1:70289544-70289563 | Msa0372000:CDS | 25.0% |
| ! | CATCATTATAGACATGATAT+GGG | - | chr3_1:70289776-70289795 | Msa0372000:CDS | 25.0% |
| ! | GAGATAAATATGAATTCGAT+AGG | + | chr3_1:70290008-70290027 | None:intergenic | 25.0% |
| ! | TCAGTAAAAGAATAAACCTT+TGG | - | chr3_1:70290283-70290302 | Msa0372000:intron | 25.0% |
| ! | CAGTAAAAGAATAAACCTTT+GGG | - | chr3_1:70290284-70290303 | Msa0372000:intron | 25.0% |
| !!! | ACACTTTTTTCTATTTTCTC+TGG | - | chr3_1:70290582-70290601 | Msa0372000:intron | 25.0% |
| ! | TTCTTGCTAAAATAAAGGAA+AGG | + | chr3_1:70290661-70290680 | None:intergenic | 25.0% |
| ! | GAAAGTTCTTGCTAAAATAA+AGG | + | chr3_1:70290666-70290685 | None:intergenic | 25.0% |
| !!! | TATTTTAGCAAGAACTTTCA+AGG | - | chr3_1:70290667-70290686 | Msa0372000:intron | 25.0% |
| ! | TGAATTGCATATAATAGAAG+GGG | + | chr3_1:70290719-70290738 | None:intergenic | 25.0% |
| ! | GTGAATTGCATATAATAGAA+GGG | + | chr3_1:70290720-70290739 | None:intergenic | 25.0% |
| ! | AGTGAATTGCATATAATAGA+AGG | + | chr3_1:70290721-70290740 | None:intergenic | 25.0% |
| ! | AAACAAATTGGAACATTTAC+GGG | + | chr3_1:70290761-70290780 | None:intergenic | 25.0% |
| ! | CAAACAAATTGGAACATTTA+CGG | + | chr3_1:70290762-70290781 | None:intergenic | 25.0% |
| !! | TCTGAATTGTTTGAAGTATT+TGG | + | chr3_1:70290867-70290886 | None:intergenic | 25.0% |
| ! | CTATATTGCTACTATATAAG+AGG | + | chr3_1:70291124-70291143 | None:intergenic | 25.0% |
| ! | CTATATAAAGCATATTCTTC+TGG | + | chr3_1:70291476-70291495 | None:intergenic | 25.0% |
| ! | TATTTACTCGATAAACAGTT+AGG | + | chr3_1:70291697-70291716 | None:intergenic | 25.0% |
| ! | TATCGAGTAAATATTTGTTC+TGG | - | chr3_1:70291704-70291723 | Msa0372000:intron | 25.0% |
| ! | ATCGAGTAAATATTTGTTCT+GGG | - | chr3_1:70291705-70291724 | Msa0372000:intron | 25.0% |
| !! | TTTGAAGTAGTTTCTATATC+AGG | + | chr3_1:70292472-70292491 | None:intergenic | 25.0% |
| ! | GATATAGAAACTACTTCAAA+TGG | - | chr3_1:70292472-70292491 | Msa0372000:intron | 25.0% |
| ! | GTATGAAAAGGAAGAAATAT+AGG | + | chr3_1:70292726-70292745 | None:intergenic | 25.0% |
| !!! | TTGTCTTGGTAATATCTTTT+CGG | + | chr3_1:70292758-70292777 | None:intergenic | 25.0% |
| ! | AATAAAATATCGGTAAGTAG+GGG | + | chr3_1:70292796-70292815 | None:intergenic | 25.0% |
| ! | CAAATAAAATATCGGTAAGT+AGG | + | chr3_1:70292798-70292817 | None:intergenic | 25.0% |
| !! | CTACTTACCGATATTTTATT+TGG | - | chr3_1:70292796-70292815 | Msa0372000:intron | 25.0% |
| ! | GTTACCTCCAAATAAAATAT+CGG | + | chr3_1:70292806-70292825 | None:intergenic | 25.0% |
| !!! | ATATTTTATTTGGAGGTAAC+CGG | - | chr3_1:70292806-70292825 | Msa0372000:intron | 25.0% |
| !!! | TTAGTTTTTCCTTAAACACA+TGG | + | chr3_1:70292865-70292884 | None:intergenic | 25.0% |
| TACTCGACATTCTTCAATTT+CGG | + | chr3_1:70287648-70287667 | None:intergenic | 30.0% | |
| TGTTTGGATTGTTGTGTTAT+AGG | - | chr3_1:70287979-70287998 | Msa0372000:intron | 30.0% | |
| TTAGAAGCCTATAAAGAAGA+GGG | + | chr3_1:70288358-70288377 | None:intergenic | 30.0% | |
| ATTAGAAGCCTATAAAGAAG+AGG | + | chr3_1:70288359-70288378 | None:intergenic | 30.0% | |
| ATTTGCCAACAAACCATTAT+AGG | - | chr3_1:70288415-70288434 | Msa0372000:three_prime_UTR | 30.0% | |
| ! | TATGGATACATCCCTATTTT+AGG | + | chr3_1:70288459-70288478 | None:intergenic | 30.0% |
| AAATAGGGATGTATCCATAT+AGG | - | chr3_1:70288460-70288479 | Msa0372000:three_prime_UTR | 30.0% | |
| GATACTTATAAGATGCTTCA+CGG | - | chr3_1:70288585-70288604 | Msa0372000:three_prime_UTR | 30.0% | |
| GCTTAATAACTAGATTAGCA+TGG | - | chr3_1:70289183-70289202 | Msa0372000:three_prime_UTR | 30.0% | |
| ! | AAGTAAAGATTCTTTGAAGG+GGG | + | chr3_1:70289251-70289270 | None:intergenic | 30.0% |
| TAAGCCTTCTCTATTTAAAG+AGG | + | chr3_1:70289291-70289310 | None:intergenic | 30.0% | |
| AAGGCTTATCTCATCTAAAA+AGG | - | chr3_1:70289303-70289322 | Msa0372000:three_prime_UTR | 30.0% | |
| AGGCTTATCTCATCTAAAAA+GGG | - | chr3_1:70289304-70289323 | Msa0372000:three_prime_UTR | 30.0% | |
| ATCAGCAAATCAATTTAGCT+TGG | + | chr3_1:70289445-70289464 | None:intergenic | 30.0% | |
| !! | TGATTTGCTGATATGACTTT+CGG | - | chr3_1:70289453-70289472 | Msa0372000:CDS | 30.0% |
| ! | TTCAAGTTCAAAAGCTTTGT+TGG | - | chr3_1:70289753-70289772 | Msa0372000:CDS | 30.0% |
| GCATCATTATAGACATGATA+TGG | - | chr3_1:70289775-70289794 | Msa0372000:CDS | 30.0% | |
| TTATATCAGTCAAATGAGTG+AGG | + | chr3_1:70289837-70289856 | None:intergenic | 30.0% | |
| ACATATAAAGGAAACTCTGA+AGG | + | chr3_1:70289934-70289953 | None:intergenic | 30.0% | |
| ! | TGTTACAATTTTCATTCTCC+CGG | - | chr3_1:70289951-70289970 | Msa0372000:CDS | 30.0% |
| TATTCAACTCGTATTCCAAA+AGG | + | chr3_1:70290502-70290521 | None:intergenic | 30.0% | |
| !!! | CTTTTTTCTATTTTCTCTGG+AGG | - | chr3_1:70290585-70290604 | Msa0372000:intron | 30.0% |
| TGCATCAATGTATTACCATA+AGG | - | chr3_1:70290625-70290644 | Msa0372000:intron | 30.0% | |
| TTTCAAGGAGGTTAAATACA+CGG | - | chr3_1:70290682-70290701 | Msa0372000:intron | 30.0% | |
| AATTGCATATAATAGAAGGG+GGG | + | chr3_1:70290717-70290736 | None:intergenic | 30.0% | |
| GAATTGCATATAATAGAAGG+GGG | + | chr3_1:70290718-70290737 | None:intergenic | 30.0% | |
| GAAAAGTGGAACAAACAAAT+TGG | + | chr3_1:70290773-70290792 | None:intergenic | 30.0% | |
| !! | TTTCTTCCTAGGTTTTTAGA+TGG | - | chr3_1:70290804-70290823 | Msa0372000:intron | 30.0% |
| ! | ATCAACTCTTTTAACATCCA+AGG | + | chr3_1:70290832-70290851 | None:intergenic | 30.0% |
| TCTATCTGTTAGCAATAAAG+AGG | - | chr3_1:70290932-70290951 | Msa0372000:intron | 30.0% | |
| ! | TTTGGTAATTGAATACCAGA+TGG | + | chr3_1:70291041-70291060 | None:intergenic | 30.0% |
| !! | AAAAAGAAGGTATTAGCCAA+TGG | - | chr3_1:70291089-70291108 | Msa0372000:intron | 30.0% |
| !! | AAAAGAAGGTATTAGCCAAT+GGG | - | chr3_1:70291090-70291109 | Msa0372000:intron | 30.0% |
| ! | AGCTTTTCTGCAATAGTTTT+AGG | + | chr3_1:70291248-70291267 | None:intergenic | 30.0% |
| TAAAACTATTGCAGAAAAGC+TGG | - | chr3_1:70291247-70291266 | Msa0372000:intron | 30.0% | |
| ATATTCTTCTGGATCAAAAC+TGG | + | chr3_1:70291465-70291484 | None:intergenic | 30.0% | |
| TTTCCATCAACAGTATTTAG+TGG | - | chr3_1:70291633-70291652 | Msa0372000:intron | 30.0% | |
| ! | TTTAGTGGATGGTAAATTAG+TGG | - | chr3_1:70291648-70291667 | Msa0372000:intron | 30.0% |
| ! | TTTTGGATAAACTACAAGCA+TGG | + | chr3_1:70291964-70291983 | None:intergenic | 30.0% |
| ! | ACGTTTATGCACAAAGTTTT+TGG | + | chr3_1:70291981-70292000 | None:intergenic | 30.0% |
| TATAGTAGAAGACTATGAAG+AGG | + | chr3_1:70292099-70292118 | None:intergenic | 30.0% | |
| TCAGAAGAAAAATCAAGCAA+CGG | + | chr3_1:70292139-70292158 | None:intergenic | 30.0% | |
| TTTCACATAATATAGGAGGT+GGG | + | chr3_1:70292170-70292189 | None:intergenic | 30.0% | |
| CTTGTTTCACATAATATAGG+AGG | + | chr3_1:70292174-70292193 | None:intergenic | 30.0% | |
| CTCCTATATTATGTGAAACA+AGG | - | chr3_1:70292172-70292191 | Msa0372000:intron | 30.0% | |
| !! | AGCCTTGTTTCACATAATAT+AGG | + | chr3_1:70292177-70292196 | None:intergenic | 30.0% |
| ! | GATGCTTCCATTTTACAAAA+TGG | - | chr3_1:70292283-70292302 | Msa0372000:intron | 30.0% |
| ! | TGACTCTCCATTTTGTAAAA+TGG | + | chr3_1:70292293-70292312 | None:intergenic | 30.0% |
| TGAAGATGAAGATGAAGAAA+TGG | - | chr3_1:70292414-70292433 | Msa0372000:intron | 30.0% | |
| AGAAATGGTTGAATCTGAAT+TGG | - | chr3_1:70292429-70292448 | Msa0372000:intron | 30.0% | |
| ! | ATTTCAGCAAAGTTTTGCTA+GGG | - | chr3_1:70292512-70292531 | Msa0372000:intron | 30.0% |
| ! | AAAGTTTTGCTAGGGATAAA+GGG | - | chr3_1:70292520-70292539 | Msa0372000:intron | 30.0% |
| !! | CAACTAACATTTTCTAAGGA+TGG | + | chr3_1:70292624-70292643 | None:intergenic | 30.0% |
| ! | TTCGCAACTAACATTTTCTA+AGG | + | chr3_1:70292628-70292647 | None:intergenic | 30.0% |
| TGTTAGTTGCGAAAAATTGT+AGG | - | chr3_1:70292635-70292654 | Msa0372000:intron | 30.0% | |
| ATAGCGAGTATGTTTCAAAA+TGG | - | chr3_1:70292676-70292695 | Msa0372000:intron | 30.0% | |
| !! | TGTCTTGGTAATATCTTTTC+GGG | + | chr3_1:70292757-70292776 | None:intergenic | 30.0% |
| ! | GGAGAATTACAATTTTGTCT+TGG | + | chr3_1:70292772-70292791 | None:intergenic | 30.0% |
| !! | CTTACCGATATTTTATTTGG+AGG | - | chr3_1:70292799-70292818 | Msa0372000:intron | 30.0% |
| !!! | CAACATGACTAGTTTTACAT+TGG | + | chr3_1:70292892-70292911 | None:intergenic | 30.0% |
| ATGATTTATTTGTCCCATTC+TGG | - | chr3_1:70292956-70292975 | Msa0372000:intron | 30.0% | |
| TCTCTCGGTTAATTATATCT+CGG | - | chr3_1:70293137-70293156 | Msa0372000:CDS | 30.0% | |
| !!! | GAACTTAAGTTTTTGGTCAA+TGG | - | chr3_1:70293283-70293302 | Msa0372000:five_prime_UTR | 30.0% |
| TTCTTGTGCATTTGCATATA+CGG | - | chr3_1:70293343-70293362 | Msa0372000:five_prime_UTR | 30.0% | |
| TGTTCGATCTTCTCTTTGAT+TGG | + | chr3_1:70287598-70287617 | None:intergenic | 35.0% | |
| ACTCGACATTCTTCAATTTC+GGG | + | chr3_1:70287647-70287666 | None:intergenic | 35.0% | |
| ATTAGGGGAATTGAAGAGAA+AGG | + | chr3_1:70287798-70287817 | None:intergenic | 35.0% | |
| !!! | GAATTGGGTTTTGTTGTAGT+TGG | - | chr3_1:70287901-70287920 | Msa0372000:intron | 35.0% |
| GAATTTCTTACTGGGTTGTT+TGG | - | chr3_1:70287963-70287982 | Msa0372000:intron | 35.0% | |
| TGTTTGACATTCTTTGTGCT+TGG | - | chr3_1:70288114-70288133 | Msa0372000:intron | 35.0% | |
| TGTGTTGTACCTATATGACA+TGG | - | chr3_1:70288249-70288268 | Msa0372000:intron | 35.0% | |
| TGTACCTATATGACATGGTT+TGG | - | chr3_1:70288254-70288273 | Msa0372000:intron | 35.0% | |
| AGTTCCAAACCATGTCATAT+AGG | + | chr3_1:70288261-70288280 | None:intergenic | 35.0% | |
| TCATCACTTCAGTGTCAAAA+AGG | + | chr3_1:70288313-70288332 | None:intergenic | 35.0% | |
| TAGAAGCCTATAAAGAAGAG+GGG | + | chr3_1:70288357-70288376 | None:intergenic | 35.0% | |
| TCCAAATGTGCTTATGCTTT+CGG | - | chr3_1:70288388-70288407 | Msa0372000:three_prime_UTR | 35.0% | |
| !!! | TCCCTATTTTAGGAGTATCT+GGG | + | chr3_1:70288449-70288468 | None:intergenic | 35.0% |
| !!! | ATCCCTATTTTAGGAGTATC+TGG | + | chr3_1:70288450-70288469 | None:intergenic | 35.0% |
| ! | TACTACATATCCGAGAGTAT+TGG | + | chr3_1:70288510-70288529 | None:intergenic | 35.0% |
| ACAAGGTTGTGATAATTCAG+TGG | - | chr3_1:70288663-70288682 | Msa0372000:three_prime_UTR | 35.0% | |
| TTGATATCCTAACATAGGGA+TGG | - | chr3_1:70288861-70288880 | Msa0372000:intron | 35.0% | |
| ACTTTACGTATCAGTGTATC+CGG | - | chr3_1:70289079-70289098 | Msa0372000:three_prime_UTR | 35.0% | |
| TCTAGTTATTAAGCCTGACT+CGG | + | chr3_1:70289177-70289196 | None:intergenic | 35.0% | |
| ACTAGTTCATTGTTCATTGG+AGG | + | chr3_1:70289217-70289236 | None:intergenic | 35.0% | |
| GGTACTAGTTCATTGTTCAT+TGG | + | chr3_1:70289220-70289239 | None:intergenic | 35.0% | |
| ! | AGTAAAGATTCTTTGAAGGG+GGG | + | chr3_1:70289250-70289269 | None:intergenic | 35.0% |
| CTTCTCTATTTAAAGAGGTC+GGG | + | chr3_1:70289286-70289305 | None:intergenic | 35.0% | |
| CCTTCTCTATTTAAAGAGGT+CGG | + | chr3_1:70289287-70289306 | None:intergenic | 35.0% | |
| GGCTTATCTCATCTAAAAAG+GGG | - | chr3_1:70289305-70289324 | Msa0372000:three_prime_UTR | 35.0% | |
| TAATAACTAGGATCGCAACA+GGG | + | chr3_1:70289366-70289385 | None:intergenic | 35.0% | |
| TTAATAACTAGGATCGCAAC+AGG | + | chr3_1:70289367-70289386 | None:intergenic | 35.0% | |
| TTGCGATCCTAGTTATTAAC+AGG | - | chr3_1:70289368-70289387 | Msa0372000:CDS | 35.0% | |
| TACTGCTCCTGTTAATAACT+AGG | + | chr3_1:70289378-70289397 | None:intergenic | 35.0% | |
| ! | TTCTGTTAGCTCTTCTTGAT+CGG | - | chr3_1:70289501-70289520 | Msa0372000:CDS | 35.0% |
| ATTACGTATCAGTGAGAAAG+AGG | + | chr3_1:70289871-70289890 | None:intergenic | 35.0% | |
| ! | AGCATAAGCATCTAAGATTC+CGG | + | chr3_1:70289973-70289992 | None:intergenic | 35.0% |
| CTTGCTAGTTGTTATACACA+AGG | - | chr3_1:70290226-70290245 | Msa0372000:intron | 35.0% | |
| AAATCAAATCACCATTCACC+AGG | + | chr3_1:70290323-70290342 | None:intergenic | 35.0% | |
| !! | TTTTCTATTTTCTCTGGAGG+TGG | - | chr3_1:70290588-70290607 | Msa0372000:intron | 35.0% |
| !! | TTTCTATTTTCTCTGGAGGT+GGG | - | chr3_1:70290589-70290608 | Msa0372000:intron | 35.0% |
| TTTAGCAAGAACTTTCAAGG+AGG | - | chr3_1:70290670-70290689 | Msa0372000:intron | 35.0% | |
| TTCAAGGAGGTTAAATACAC+GGG | - | chr3_1:70290683-70290702 | Msa0372000:intron | 35.0% | |
| AAGGTTCCATCTAAAAACCT+AGG | + | chr3_1:70290813-70290832 | None:intergenic | 35.0% | |
| !! | TAGGTTTTTAGATGGAACCT+TGG | - | chr3_1:70290812-70290831 | Msa0372000:intron | 35.0% |
| !! | TGTTAAAAGAGTTGATGCCA+TGG | - | chr3_1:70290836-70290855 | Msa0372000:intron | 35.0% |
| AGATAGAGATTCTTCTGACA+TGG | + | chr3_1:70290919-70290938 | None:intergenic | 35.0% | |
| ATCTGTTAGCAATAAAGAGG+TGG | - | chr3_1:70290935-70290954 | Msa0372000:intron | 35.0% | |
| CACTGCATTATCAATCTGAT+CGG | + | chr3_1:70290991-70291010 | None:intergenic | 35.0% | |
| GCTACTATATAAGAGGTCTT+CGG | + | chr3_1:70291117-70291136 | None:intergenic | 35.0% | |
| TATAGATGCAGCAACTTGAA+AGG | + | chr3_1:70291147-70291166 | None:intergenic | 35.0% | |
| TATAAACCGAGCAAAGTCAA+GGG | - | chr3_1:70291163-70291182 | Msa0372000:intron | 35.0% | |
| GATTCAACAGTGAACATTTC+TGG | - | chr3_1:70291281-70291300 | Msa0372000:CDS | 35.0% | |
| TCTGCAACGAATCGTAATAT+TGG | - | chr3_1:70291404-70291423 | Msa0372000:intron | 35.0% | |
| ! | GAGCTTTCTGTGTAATTTTC+TGG | + | chr3_1:70291530-70291549 | None:intergenic | 35.0% |
| CATCCACTAAATACTGTTGA+TGG | + | chr3_1:70291639-70291658 | None:intergenic | 35.0% | |
| CATCAACAGTATTTAGTGGA+TGG | - | chr3_1:70291637-70291656 | Msa0372000:intron | 35.0% | |
| ATGGTAAATTAGTGGCAGTT+GGG | - | chr3_1:70291656-70291675 | Msa0372000:intron | 35.0% | |
| TACTCTGCTCTTCAAGAAAT+TGG | - | chr3_1:70291760-70291779 | Msa0372000:intron | 35.0% | |
| TGCTCTTCAAGAAATTGGTT+GGG | - | chr3_1:70291765-70291784 | Msa0372000:intron | 35.0% | |
| ! | AGATAATAGTACTGGAGACT+AGG | + | chr3_1:70291814-70291833 | None:intergenic | 35.0% |
| AGTCTCCAGTACTATTATCT+TGG | - | chr3_1:70291814-70291833 | Msa0372000:intron | 35.0% | |
| AGTAGCCAAGATAATAGTAC+TGG | + | chr3_1:70291822-70291841 | None:intergenic | 35.0% | |
| ! | TTAACTTACTGATAGCGAAG+AGG | + | chr3_1:70291907-70291926 | None:intergenic | 35.0% |
| ACTATATCAGCATGCTGTAT+AGG | - | chr3_1:70292113-70292132 | Msa0372000:intron | 35.0% | |
| GTTTCACATAATATAGGAGG+TGG | + | chr3_1:70292171-70292190 | None:intergenic | 35.0% | |
| AACATCAATGAATGATCTCC+AGG | - | chr3_1:70292200-70292219 | Msa0372000:intron | 35.0% | |
| TCAAATGGTGAACCAGAAAA+TGG | - | chr3_1:70292487-70292506 | Msa0372000:intron | 35.0% | |
| ! | GATTTCAGCAAAGTTTTGCT+AGG | - | chr3_1:70292511-70292530 | Msa0372000:intron | 35.0% |
| ! | CAAAGTTTTGCTAGGGATAA+AGG | - | chr3_1:70292519-70292538 | Msa0372000:intron | 35.0% |
| ATCATACCTTGTATCTCACA+CGG | + | chr3_1:70292549-70292568 | None:intergenic | 35.0% | |
| GTGAATTTCAGACATGTTGT+CGG | - | chr3_1:70292698-70292717 | Msa0372000:intron | 35.0% | |
| TAGTGATAGAGGAAAGAGTT+TGG | - | chr3_1:70292837-70292856 | Msa0372000:intron | 35.0% | |
| AGTTTGGATCCATGTGTTTA+AGG | - | chr3_1:70292853-70292872 | Msa0372000:intron | 35.0% | |
| ACTAGTCATGTTGCATGTTT+AGG | - | chr3_1:70292899-70292918 | Msa0372000:intron | 35.0% | |
| ATGGGACAAATAAATCATGC+AGG | + | chr3_1:70292954-70292973 | None:intergenic | 35.0% | |
| AAGGATCTGCAAAGTGTATT+TGG | - | chr3_1:70293029-70293048 | Msa0372000:intron | 35.0% | |
| ! | ATACAGGATCTTATTTGCTG+GGG | + | chr3_1:70293196-70293215 | None:intergenic | 35.0% |
| ! | GATACAGGATCTTATTTGCT+GGG | + | chr3_1:70293197-70293216 | None:intergenic | 35.0% |
| ! | TCTTAGTTGAAGCATCAAGT+TGG | - | chr3_1:70293439-70293458 | Msa0372000:five_prime_UTR | 35.0% |
| GAACCATGAGAGATGCTATT+GGG | + | chr3_1:70287772-70287791 | None:intergenic | 40.0% | |
| TGAACCATGAGAGATGCTAT+TGG | + | chr3_1:70287773-70287792 | None:intergenic | 40.0% | |
| !!! | TTGGGTTTTGTTGTAGTTGG+TGG | - | chr3_1:70287904-70287923 | Msa0372000:intron | 40.0% |
| TTTCTTTGTTACAGGCATGC+TGG | - | chr3_1:70288053-70288072 | Msa0372000:intron | 40.0% | |
| ATGTCAAACAACACCAACCT+TGG | + | chr3_1:70288104-70288123 | None:intergenic | 40.0% | |
| TTCAGACCCCTCTTCTTTAT+AGG | - | chr3_1:70288348-70288367 | Msa0372000:intron | 40.0% | |
| ! | TCCGAAAGCATAAGCACATT+TGG | + | chr3_1:70288392-70288411 | None:intergenic | 40.0% |
| ! | CGTAGCCTATAATGGTTTGT+TGG | + | chr3_1:70288423-70288442 | None:intergenic | 40.0% |
| AGCCCAGATACTCCTAAAAT+AGG | - | chr3_1:70288444-70288463 | Msa0372000:three_prime_UTR | 40.0% | |
| GCCCAGATACTCCTAAAATA+GGG | - | chr3_1:70288445-70288464 | Msa0372000:three_prime_UTR | 40.0% | |
| GTATCCATATAGGATACGTG+TGG | - | chr3_1:70288470-70288489 | Msa0372000:three_prime_UTR | 40.0% | |
| ATGTCCACACGTATCCTATA+TGG | + | chr3_1:70288477-70288496 | None:intergenic | 40.0% | |
| ATGCTTCACGGATATACTCT+CGG | - | chr3_1:70288597-70288616 | Msa0372000:three_prime_UTR | 40.0% | |
| CTATTCTCCATCCCTATGTT+AGG | + | chr3_1:70288871-70288890 | None:intergenic | 40.0% | |
| GGTGTGAAAGTAAAACGATC+CGG | + | chr3_1:70289101-70289120 | None:intergenic | 40.0% | |
| ! | GTAAAGATTCTTTGAAGGGG+GGG | + | chr3_1:70289249-70289268 | None:intergenic | 40.0% |
| TTTAAAGAGGTCGGGAGAAA+TGG | + | chr3_1:70289278-70289297 | None:intergenic | 40.0% | |
| CCGACCTCTTTAAATAGAGA+AGG | - | chr3_1:70289284-70289303 | Msa0372000:three_prime_UTR | 40.0% | |
| AAAGGGGACTCATTATTCAC+TGG | - | chr3_1:70289321-70289340 | Msa0372000:exon | 40.0% | |
| !! | CAACAGGGTTTTTGTTTCAG+TGG | + | chr3_1:70289351-70289370 | None:intergenic | 40.0% |
| ! | TCTGTTAGCTCTTCTTGATC+GGG | - | chr3_1:70289502-70289521 | Msa0372000:CDS | 40.0% |
| !!! | CAACAGGTTTTTTCCATCTC+CGG | + | chr3_1:70289560-70289579 | None:intergenic | 40.0% |
| !! | TCAAGCGGATTGTATAGGAA+GGG | + | chr3_1:70289583-70289602 | None:intergenic | 40.0% |
| !! | TTCAAGCGGATTGTATAGGA+AGG | + | chr3_1:70289584-70289603 | None:intergenic | 40.0% |
| !! | TGCTTTCAAGCGGATTGTAT+AGG | + | chr3_1:70289588-70289607 | None:intergenic | 40.0% |
| CAAAGTCACTTGCTTTCAAG+CGG | + | chr3_1:70289598-70289617 | None:intergenic | 40.0% | |
| AAGTGACTTTGTTCCCTCTA+AGG | - | chr3_1:70289607-70289626 | Msa0372000:CDS | 40.0% | |
| ACACGAAGTTGTTCCTTAGA+GGG | + | chr3_1:70289623-70289642 | None:intergenic | 40.0% | |
| TACACGAAGTTGTTCCTTAG+AGG | + | chr3_1:70289624-70289643 | None:intergenic | 40.0% | |
| GTGTATCTAGACGAATGCAA+AGG | - | chr3_1:70289639-70289658 | Msa0372000:CDS | 40.0% | |
| ATCAGTGAGAAAGAGGATGA+TGG | + | chr3_1:70289864-70289883 | None:intergenic | 40.0% | |
| ! | GCATAAGCATCTAAGATTCC+GGG | + | chr3_1:70289972-70289991 | None:intergenic | 40.0% |
| ! | GTATGTGAGTTGAGACTTGA+TGG | - | chr3_1:70290394-70290413 | Msa0372000:intron | 40.0% |
| AAGTCCTCACATAGTCACAT+GGG | - | chr3_1:70290455-70290474 | Msa0372000:intron | 40.0% | |
| ! | GACTCAAACTCACATCCTTT+TGG | - | chr3_1:70290484-70290503 | Msa0372000:intron | 40.0% |
| AAAGGAGAAGCAACACCTTA+TGG | + | chr3_1:70290643-70290662 | None:intergenic | 40.0% | |
| !! | TTTGTTCCACTTTTCACCGA+TGG | - | chr3_1:70290778-70290797 | Msa0372000:intron | 40.0% |
| AAAGAACCATCGGTGAAAAG+TGG | + | chr3_1:70290787-70290806 | None:intergenic | 40.0% | |
| ACCTAGGAAGAAAGAACCAT+CGG | + | chr3_1:70290797-70290816 | None:intergenic | 40.0% | |
| !! | TAAAAGAGTTGATGCCATGG+AGG | - | chr3_1:70290839-70290858 | Msa0372000:intron | 40.0% |
| ! | TGAAGTATTTGGTTCCTCCA+TGG | + | chr3_1:70290856-70290875 | None:intergenic | 40.0% |
| !! | ATGATGGGTTGTTATGGACA+AGG | + | chr3_1:70290893-70290912 | None:intergenic | 40.0% |
| ACCAAAAGCTTCAGTCAGAA+TGG | - | chr3_1:70291055-70291074 | Msa0372000:intron | 40.0% | |
| ! | ACCATTCTGACTGAAGCTTT+TGG | + | chr3_1:70291059-70291078 | None:intergenic | 40.0% |
| TTCAGTCAGAATGGTTTCAC+AGG | - | chr3_1:70291064-70291083 | Msa0372000:intron | 40.0% | |
| TCAGTCAGAATGGTTTCACA+GGG | - | chr3_1:70291065-70291084 | Msa0372000:intron | 40.0% | |
| CTATAAACCGAGCAAAGTCA+AGG | - | chr3_1:70291162-70291181 | Msa0372000:intron | 40.0% | |
| ACCATCAAGAGATAGTGAGA+AGG | - | chr3_1:70291208-70291227 | Msa0372000:intron | 40.0% | |
| TCCTTCTCACTATCTCTTGA+TGG | + | chr3_1:70291212-70291231 | None:intergenic | 40.0% | |
| AGAGATAGTGAGAAGGAGAA+TGG | - | chr3_1:70291215-70291234 | Msa0372000:intron | 40.0% | |
| !! | ACATTTCTGGTCTGTCTATC+AGG | - | chr3_1:70291294-70291313 | Msa0372000:CDS | 40.0% |
| !! | CATTTCTGGTCTGTCTATCA+GGG | - | chr3_1:70291295-70291314 | Msa0372000:CDS | 40.0% |
| GCAACGAATCGTAATATTGG+AGG | - | chr3_1:70291407-70291426 | Msa0372000:intron | 40.0% | |
| ! | AAAGCTCATATCGCAGGTTT+TGG | - | chr3_1:70291543-70291562 | Msa0372000:intron | 40.0% |
| GATGGTAAATTAGTGGCAGT+TGG | - | chr3_1:70291655-70291674 | Msa0372000:intron | 40.0% | |
| TGGTAAATTAGTGGCAGTTG+GGG | - | chr3_1:70291657-70291676 | Msa0372000:intron | 40.0% | |
| AGTGATAGAAAGGCAAAGTC+TGG | + | chr3_1:70291733-70291752 | None:intergenic | 40.0% | |
| GACTTTGCCTTTCTATCACT+AGG | - | chr3_1:70291733-70291752 | Msa0372000:intron | 40.0% | |
| GTACTTGCCTAGTGATAGAA+AGG | + | chr3_1:70291743-70291762 | None:intergenic | 40.0% | |
| CTGCTCTTCAAGAAATTGGT+TGG | - | chr3_1:70291764-70291783 | Msa0372000:intron | 40.0% | |
| TGGTTGGGTGAAAAATAACC+AGG | - | chr3_1:70291780-70291799 | Msa0372000:intron | 40.0% | |
| AAACTACAAGCATGGTGAAG+TGG | + | chr3_1:70291956-70291975 | None:intergenic | 40.0% | |
| ATCAATGAATGATCTCCAGG+TGG | - | chr3_1:70292203-70292222 | Msa0372000:intron | 40.0% | |
| TCAATGAATGATCTCCAGGT+GGG | - | chr3_1:70292204-70292223 | Msa0372000:intron | 40.0% | |
| AATGTCAAATGAAACCCACC+TGG | + | chr3_1:70292221-70292240 | None:intergenic | 40.0% | |
| GGGTTTCATTTGACATTGCA+AGG | - | chr3_1:70292224-70292243 | Msa0372000:intron | 40.0% | |
| TAACGCTTTCTGTCAAGCAA+AGG | + | chr3_1:70292250-70292269 | None:intergenic | 40.0% | |
| ATCTTCAGCAACTTGAAGTG+GGG | + | chr3_1:70292317-70292336 | None:intergenic | 40.0% | |
| GATCTTCAGCAACTTGAAGT+GGG | + | chr3_1:70292318-70292337 | None:intergenic | 40.0% | |
| TGATCTTCAGCAACTTGAAG+TGG | + | chr3_1:70292319-70292338 | None:intergenic | 40.0% | |
| TCAAGACACTATGTTAAGCC+AGG | - | chr3_1:70292336-70292355 | Msa0372000:intron | 40.0% | |
| !! | TTGCTGAAATCGCCATTTTC+TGG | + | chr3_1:70292502-70292521 | None:intergenic | 40.0% |
| TCATACCTTGTATCTCACAC+GGG | + | chr3_1:70292548-70292567 | None:intergenic | 40.0% | |
| CTTAAAGCACAGGAAGTAAC+TGG | + | chr3_1:70292594-70292613 | None:intergenic | 40.0% | |
| !! | AACATTTTCTAAGGATGGCC+AGG | + | chr3_1:70292619-70292638 | None:intergenic | 40.0% |
| !! | GTAATATCTTTTCGGGAGAC+GGG | + | chr3_1:70292750-70292769 | None:intergenic | 40.0% |
| !! | GGTAATATCTTTTCGGGAGA+CGG | + | chr3_1:70292751-70292770 | None:intergenic | 40.0% |
| AAAATATCGGTAAGTAGGGG+AGG | + | chr3_1:70292793-70292812 | None:intergenic | 40.0% | |
| TTATTTGGAGGTAACCGGAT+TGG | - | chr3_1:70292811-70292830 | Msa0372000:CDS | 40.0% | |
| TATTTGGAGGTAACCGGATT+GGG | - | chr3_1:70292812-70292831 | Msa0372000:CDS | 40.0% | |
| ACAACAAGTCAGACCAGAAT+GGG | + | chr3_1:70292972-70292991 | None:intergenic | 40.0% | |
| TCCTTCAGATATGAATAGCG+CGG | + | chr3_1:70293014-70293033 | None:intergenic | 40.0% | |
| AGTCACAGTTGCAGAAATAC+AGG | - | chr3_1:70293075-70293094 | Msa0372000:intron | 40.0% | |
| ACAGTTGCAGAAATACAGGA+GGG | - | chr3_1:70293079-70293098 | Msa0372000:intron | 40.0% | |
| ! | GGATACAGGATCTTATTTGC+TGG | + | chr3_1:70293198-70293217 | None:intergenic | 40.0% |
| TTTGATCCCCATTTGTCTCT+AGG | - | chr3_1:70293234-70293253 | Msa0372000:CDS | 40.0% | |
| TGCCATTCCTAGAGACAAAT+GGG | + | chr3_1:70293244-70293263 | None:intergenic | 40.0% | |
| ATGCCATTCCTAGAGACAAA+TGG | + | chr3_1:70293245-70293264 | None:intergenic | 40.0% | |
| CCATATTCAGCAACTAATGC+TGG | + | chr3_1:70293397-70293416 | None:intergenic | 40.0% | |
| CCAGCATTAGTTGCTGAATA+TGG | - | chr3_1:70293394-70293413 | Msa0372000:five_prime_UTR | 40.0% | |
| GAAGAATGTCGAGTACGAAG+AGG | - | chr3_1:70287653-70287672 | Msa0372000:three_prime_UTR | 45.0% | |
| TAGCAGTAGCAAAACCCCAA+AGG | - | chr3_1:70287684-70287703 | Msa0372000:three_prime_UTR | 45.0% | |
| AGCAACAACGCTTTCCTTTG+GGG | + | chr3_1:70287701-70287720 | None:intergenic | 45.0% | |
| CAGCAACAACGCTTTCCTTT+GGG | + | chr3_1:70287702-70287721 | None:intergenic | 45.0% | |
| TCAGCAACAACGCTTTCCTT+TGG | + | chr3_1:70287703-70287722 | None:intergenic | 45.0% | |
| !! | GAAAGCGTTGTTGCTGATTG+CGG | - | chr3_1:70287706-70287725 | Msa0372000:three_prime_UTR | 45.0% |
| ! | CATGCTGGCATATAGCCTTA+CGG | - | chr3_1:70288068-70288087 | Msa0372000:intron | 45.0% |
| ! | CTTGGTAGTCATACACCGTA+AGG | + | chr3_1:70288086-70288105 | None:intergenic | 45.0% |
| CTTACGGTGTATGACTACCA+AGG | - | chr3_1:70288084-70288103 | Msa0372000:intron | 45.0% | |
| CGATACTCTGCCAATACTCT+CGG | - | chr3_1:70288497-70288516 | Msa0372000:three_prime_UTR | 45.0% | |
| !! | ATGGATGATGGTAATGGGAG+AGG | - | chr3_1:70288779-70288798 | Msa0372000:intron | 45.0% |
| ! | AATGGGAGAGGAGACTCTTT+TGG | - | chr3_1:70288791-70288810 | Msa0372000:intron | 45.0% |
| ATCCGGGCTTCATAGACTAT+AGG | - | chr3_1:70289131-70289150 | Msa0372000:three_prime_UTR | 45.0% | |
| TCATAGACTATAGGCCGAGT+AGG | - | chr3_1:70289140-70289159 | Msa0372000:three_prime_UTR | 45.0% | |
| ! | CTGTTAGCTCTTCTTGATCG+GGG | - | chr3_1:70289503-70289522 | Msa0372000:CDS | 45.0% |
| GATTGTATAGGAAGGGCAAC+AGG | + | chr3_1:70289576-70289595 | None:intergenic | 45.0% | |
| !! | ATGTGTCACTTCCTGGTGAA+TGG | - | chr3_1:70290309-70290328 | Msa0372000:intron | 45.0% |
| ! | TTGATGGCTAACCAGAGTCA+GGG | - | chr3_1:70290410-70290429 | Msa0372000:intron | 45.0% |
| CTTAAGACTTTCCCTGACTC+TGG | + | chr3_1:70290424-70290443 | None:intergenic | 45.0% | |
| CAGAGTCAGGGAAAGTCTTA+AGG | - | chr3_1:70290422-70290441 | Msa0372000:intron | 45.0% | |
| GAAGTCCTCACATAGTCACA+TGG | - | chr3_1:70290454-70290473 | Msa0372000:intron | 45.0% | |
| ! | CGAGTTGAATACCTACCAAC+TGG | - | chr3_1:70290511-70290530 | Msa0372000:intron | 45.0% |
| CGAAAATTGGTCCAGTTGGT+AGG | + | chr3_1:70290525-70290544 | None:intergenic | 45.0% | |
| CCTACGAAAATTGGTCCAGT+TGG | + | chr3_1:70290529-70290548 | None:intergenic | 45.0% | |
| ! | CCAACTGGACCAATTTTCGT+AGG | - | chr3_1:70290526-70290545 | Msa0372000:intron | 45.0% |
| GTGGCAAAGCCTACGAAAAT+TGG | + | chr3_1:70290538-70290557 | None:intergenic | 45.0% | |
| ACCGATGGTTCTTTCTTCCT+AGG | - | chr3_1:70290793-70290812 | Msa0372000:intron | 45.0% | |
| !! | TGGAGCATGATGGGTTGTTA+TGG | + | chr3_1:70290899-70290918 | None:intergenic | 45.0% |
| CTTCTGACATGGAGCATGAT+GGG | + | chr3_1:70290908-70290927 | None:intergenic | 45.0% | |
| TCTTCTGACATGGAGCATGA+TGG | + | chr3_1:70290909-70290928 | None:intergenic | 45.0% | |
| GTGCACATGTTCACTGAGAA+CGG | - | chr3_1:70291008-70291027 | Msa0372000:intron | 45.0% | |
| TGCACATGTTCACTGAGAAC+GGG | - | chr3_1:70291009-70291028 | Msa0372000:intron | 45.0% | |
| CAGTCAGAATGGTTTCACAG+GGG | - | chr3_1:70291066-70291085 | Msa0372000:intron | 45.0% | |
| GGTTTCACAGGGGAAAAAGA+AGG | - | chr3_1:70291076-70291095 | Msa0372000:intron | 45.0% | |
| CGATTCGTTGCAGACTTCTT+TGG | + | chr3_1:70291398-70291417 | None:intergenic | 45.0% | |
| ACACAGAAAGCTCATATCGC+AGG | - | chr3_1:70291537-70291556 | Msa0372000:intron | 45.0% | |
| GATAACACAGTTCCTCCTTG+TGG | - | chr3_1:70291601-70291620 | Msa0372000:intron | 45.0% | |
| ! | ACAGTTCCTCCTTGTGGTTT+TGG | - | chr3_1:70291607-70291626 | Msa0372000:intron | 45.0% |
| AAAGAGCCAAAACCACAAGG+AGG | + | chr3_1:70291616-70291635 | None:intergenic | 45.0% | |
| TGGAAAGAGCCAAAACCACA+AGG | + | chr3_1:70291619-70291638 | None:intergenic | 45.0% | |
| GTACTGGAGACTAGGACAAT+AGG | + | chr3_1:70291806-70291825 | None:intergenic | 45.0% | |
| !! | GAGGACATAGTAGCTCTGAA+GGG | + | chr3_1:70291888-70291907 | None:intergenic | 45.0% |
| !! | AGAGGACATAGTAGCTCTGA+AGG | + | chr3_1:70291889-70291908 | None:intergenic | 45.0% |
| !! | TTAAGCCAGGTTGATGACAG+TGG | - | chr3_1:70292349-70292368 | Msa0372000:intron | 45.0% |
| ATTTGGAGGTAACCGGATTG+GGG | - | chr3_1:70292813-70292832 | Msa0372000:CDS | 45.0% | |
| CTCTATCACTATCCCCAATC+CGG | + | chr3_1:70292828-70292847 | None:intergenic | 45.0% | |
| GACAACAAGTCAGACCAGAA+TGG | + | chr3_1:70292973-70292992 | None:intergenic | 45.0% | |
| ACCGCGCTATTCATATCTGA+AGG | - | chr3_1:70293010-70293029 | Msa0372000:intron | 45.0% | |
| CACAGTTGCAGAAATACAGG+AGG | - | chr3_1:70293078-70293097 | Msa0372000:intron | 45.0% | |
| CAGAAATACAGGAGGGTTGT+CGG | - | chr3_1:70293086-70293105 | Msa0372000:intron | 45.0% | |
| ! | TCCCCATTTGTCTCTAGGAA+TGG | - | chr3_1:70293239-70293258 | Msa0372000:exon | 45.0% |
| GCCATTCCTAGAGACAAATG+GGG | + | chr3_1:70293243-70293262 | None:intergenic | 45.0% | |
| !! | AAAAGATATAATATATTTAA+GGG | + | chr3_1:70290088-70290107 | None:intergenic | 5.0% |
| !! | TAAAAGATATAATATATTTA+AGG | + | chr3_1:70290089-70290108 | None:intergenic | 5.0% |
| !!! | TTTTATTTTATAACAATTAT+TGG | - | chr3_1:70292028-70292047 | Msa0372000:intron | 5.0% |
| TGAGAGATGCTATTGGGACG+AGG | + | chr3_1:70287766-70287785 | None:intergenic | 50.0% | |
| CGTCCCAATAGCATCTCTCA+TGG | - | chr3_1:70287766-70287785 | Msa0372000:three_prime_UTR | 50.0% | |
| CGGTGTATGACTACCAAGGT+TGG | - | chr3_1:70288088-70288107 | Msa0372000:intron | 50.0% | |
| CTGGGCTTCGTAGCCTATAA+TGG | + | chr3_1:70288431-70288450 | None:intergenic | 50.0% | |
| TCACACCCACACCATGTATC+CGG | - | chr3_1:70289114-70289133 | Msa0372000:three_prime_UTR | 50.0% | |
| GTCTATGAAGCCCGGATACA+TGG | + | chr3_1:70289128-70289147 | None:intergenic | 50.0% | |
| GGCCTATAGTCTATGAAGCC+CGG | + | chr3_1:70289136-70289155 | None:intergenic | 50.0% | |
| AGACTATAGGCCGAGTAGGA+TGG | - | chr3_1:70289144-70289163 | Msa0372000:three_prime_UTR | 50.0% | |
| CGGTCGTTAACCATCCTACT+CGG | + | chr3_1:70289157-70289176 | None:intergenic | 50.0% | |
| ! | TCTTTGAAGGGGGGGAAGTT+AGG | + | chr3_1:70289241-70289260 | None:intergenic | 50.0% |
| GGAAGTGACACATGTCCCAA+AGG | + | chr3_1:70290302-70290321 | None:intergenic | 50.0% | |
| !! | TTGGGACATGTGTCACTTCC+TGG | - | chr3_1:70290302-70290321 | Msa0372000:intron | 50.0% |
| ! | CTTGATGGCTAACCAGAGTC+AGG | - | chr3_1:70290409-70290428 | Msa0372000:intron | 50.0% |
| ACTGCCCATGTGACTATGTG+AGG | + | chr3_1:70290462-70290481 | None:intergenic | 50.0% | |
| GCACATGTTCACTGAGAACG+GGG | - | chr3_1:70291010-70291029 | Msa0372000:intron | 50.0% | |
| GAGAACGGGGAATTTCCATC+TGG | - | chr3_1:70291023-70291042 | Msa0372000:intron | 50.0% | |
| TAAGAGGTCTTCGGACCCAT+TGG | + | chr3_1:70291108-70291127 | None:intergenic | 50.0% | |
| CCTTGTCCCTTGACTTTGCT+CGG | + | chr3_1:70291172-70291191 | None:intergenic | 50.0% | |
| GCAAAGTCAAGGGACAAGGA+TGG | - | chr3_1:70291173-70291192 | Msa0372000:intron | 50.0% | |
| CTGTCTATCAGGGCTTGCAA+TGG | - | chr3_1:70291305-70291324 | Msa0372000:CDS | 50.0% | |
| CTTGACCACTGTCATCAACC+TGG | + | chr3_1:70292357-70292376 | None:intergenic | 50.0% | |
| ! | CTTCCTGTGCTTTAAGCACC+TGG | - | chr3_1:70292598-70292617 | Msa0372000:intron | 50.0% |
| ! | CGGATTGGGGATAGTGATAG+AGG | - | chr3_1:70292826-70292845 | Msa0372000:CDS | 50.0% |
| TCGTGAGCAGCAGAGATACT+TGG | - | chr3_1:70293052-70293071 | Msa0372000:intron | 50.0% | |
| TCCAGTGTTATCCGAGCGAA+TGG | - | chr3_1:70293109-70293128 | Msa0372000:intron | 50.0% | |
| ACCATTCGCTCGGATAACAC+TGG | + | chr3_1:70293113-70293132 | None:intergenic | 50.0% | |
| GAGAGAGTAGACCATTCGCT+CGG | + | chr3_1:70293123-70293142 | None:intergenic | 50.0% | |
| GAGCGAATGGTCTACTCTCT+CGG | - | chr3_1:70293122-70293141 | Msa0372000:intron | 50.0% | |
| AAGATCCTGTATCCAGCAGC+TGG | - | chr3_1:70293204-70293223 | Msa0372000:CDS | 50.0% | |
| TCAAATTCAGCTCCAGCTGC+TGG | + | chr3_1:70293219-70293238 | None:intergenic | 50.0% | |
| !! | GGAAAGCGTCGAAGCTCTTG+TGG | - | chr3_1:70287727-70287746 | Msa0372000:three_prime_UTR | 55.0% |
| CACACCCACACCATGTATCC+GGG | - | chr3_1:70289115-70289134 | Msa0372000:three_prime_UTR | 55.0% | |
| GAAGCCCGGATACATGGTGT+GGG | + | chr3_1:70289122-70289141 | None:intergenic | 55.0% | |
| TGAAGCCCGGATACATGGTG+TGG | + | chr3_1:70289123-70289142 | None:intergenic | 55.0% | |
| GGATGGTTAACGACCGAGTC+AGG | - | chr3_1:70289161-70289180 | Msa0372000:three_prime_UTR | 55.0% | |
| TAGCTCTTCTTGATCGGGGC+TGG | - | chr3_1:70289507-70289526 | Msa0372000:CDS | 55.0% | |
| CCGAGCAAAGTCAAGGGACA+AGG | - | chr3_1:70291169-70291188 | Msa0372000:intron | 55.0% | |
| GGAGACTAGGACAATAGGCC+TGG | + | chr3_1:70291801-70291820 | None:intergenic | 55.0% | |
| GGGATCCCGTGTGAGATACA+AGG | - | chr3_1:70292540-70292559 | Msa0372000:intron | 55.0% | |
| TGGCCAGGTGCTTAAAGCAC+AGG | + | chr3_1:70292604-70292623 | None:intergenic | 55.0% | |
| ! | CGGGAGACGGGAGTATGAAA+AGG | + | chr3_1:70292738-70292757 | None:intergenic | 55.0% |
| GATCGGGGCTGGAGAAGATC+TGG | - | chr3_1:70289518-70289537 | Msa0372000:CDS | 60.0% | |
| CAGCTCCAGCTGCTGGATAC+AGG | + | chr3_1:70293212-70293231 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 70287410 | 70293504 | 70287410 | ID=Msa0372000;Name=Msa0372000 |
| chr3_1 | mRNA | 70287410 | 70293504 | 70287410 | ID=Msa0372000-mRNA-1;Parent=Msa0372000;Name=Msa0372000-mRNA-1;_AED=0.01;_eAED=0.01;_QI=248|1|1|1|1|0.83|6|1150|361 |
| chr3_1 | exon | 70287410 | 70287882 | 70287410 | ID=Msa0372000-mRNA-1:exon:15267;Parent=Msa0372000-mRNA-1 |
| chr3_1 | exon | 70288353 | 70288692 | 70288353 | ID=Msa0372000-mRNA-1:exon:15266;Parent=Msa0372000-mRNA-1 |
| chr3_1 | exon | 70288997 | 70290099 | 70288997 | ID=Msa0372000-mRNA-1:exon:15265;Parent=Msa0372000-mRNA-1 |
| chr3_1 | exon | 70291254 | 70291404 | 70291254 | ID=Msa0372000-mRNA-1:exon:15264;Parent=Msa0372000-mRNA-1 |
| chr3_1 | exon | 70292809 | 70292847 | 70292809 | ID=Msa0372000-mRNA-1:exon:15263;Parent=Msa0372000-mRNA-1 |
| chr3_1 | exon | 70293127 | 70293504 | 70293127 | ID=Msa0372000-mRNA-1:exon:15262;Parent=Msa0372000-mRNA-1 |
| chr3_1 | five_prime_UTR | 70293257 | 70293504 | 70293257 | ID=Msa0372000-mRNA-1:five_prime_utr;Parent=Msa0372000-mRNA-1 |
| chr3_1 | CDS | 70293127 | 70293256 | 70293127 | ID=Msa0372000-mRNA-1:cds;Parent=Msa0372000-mRNA-1 |
| chr3_1 | CDS | 70292809 | 70292847 | 70292809 | ID=Msa0372000-mRNA-1:cds;Parent=Msa0372000-mRNA-1 |
| chr3_1 | CDS | 70291254 | 70291404 | 70291254 | ID=Msa0372000-mRNA-1:cds;Parent=Msa0372000-mRNA-1 |
| chr3_1 | CDS | 70289334 | 70290099 | 70289334 | ID=Msa0372000-mRNA-1:cds;Parent=Msa0372000-mRNA-1 |
| chr3_1 | three_prime_UTR | 70288997 | 70289333 | 70288997 | ID=Msa0372000-mRNA-1:three_prime_utr;Parent=Msa0372000-mRNA-1 |
| chr3_1 | three_prime_UTR | 70288353 | 70288692 | 70288353 | ID=Msa0372000-mRNA-1:three_prime_utr;Parent=Msa0372000-mRNA-1 |
| chr3_1 | three_prime_UTR | 70287410 | 70287882 | 70287410 | ID=Msa0372000-mRNA-1:three_prime_utr;Parent=Msa0372000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
