Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0514890 | XP_003601923.1 | 98.056 | 720 | 14 | 0 | 1 | 720 | 1 | 720 | 0.0 | 1462 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0514890 | sp|Q54Q92|LMD2A_DICDI | 29.293 | 495 | 320 | 12 | 55 | 541 | 110 | 582 | 1.07e-51 | 195 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0514890 | G7J381 | 98.056 | 720 | 14 | 0 | 1 | 720 | 1 | 720 | 0.0 | 1462 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0469170 | Msa0514890 | 0.811629 | 6.361774e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0514890 | MtrunA17_Chr3g0123731 | 98.056 | 720 | 14 | 0 | 1 | 720 | 1 | 720 | 0.0 | 1462 |
| Msa0514890 | MtrunA17_Chr8g0381781 | 80.166 | 721 | 137 | 4 | 1 | 718 | 1 | 718 | 0.0 | 1209 |
| Msa0514890 | MtrunA17_Chr4g0050171 | 73.650 | 463 | 120 | 2 | 1 | 462 | 1 | 462 | 0.0 | 715 |
| Msa0514890 | MtrunA17_Chr4g0050161 | 48.438 | 256 | 102 | 10 | 464 | 709 | 1 | 236 | 2.02e-57 | 195 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0514890 | AT5G65290.1 | 71.196 | 736 | 190 | 9 | 1 | 720 | 1 | 730 | 0.0 | 1041 |
| Msa0514890 | AT5G65290.2 | 78.333 | 540 | 111 | 3 | 1 | 536 | 1 | 538 | 0.0 | 869 |
Find 205 sgRNAs with CRISPR-Local
Find 618 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACAACGCCGTCCCTTTATT+TGG | 0.138899 | 3_4:-65784928 | Msa0514890:CDS |
| TTCTCGTCCCTGCTGATATT+TGG | 0.160912 | 3_4:-65792718 | Msa0514890:CDS |
| CATCACTGTACAAGATAATT+TGG | 0.172484 | 3_4:+65783811 | None:intergenic |
| AAACCACAAGGCGGGCAATT+AGG | 0.191717 | 3_4:-65789256 | Msa0514890:CDS |
| TCAAATATAGTTTCTTTATT+AGG | 0.194715 | 3_4:+65785626 | None:intergenic |
| GTTACTGGTGCATTTCTTCT+TGG | 0.197302 | 3_4:-65790237 | Msa0514890:CDS |
| ATGGAGGTATTTCTTTCTTT+TGG | 0.213086 | 3_4:-65791841 | Msa0514890:CDS |
| GTTAACTGAGCTGGTTTGTC+TGG | 0.226512 | 3_4:+65785829 | None:intergenic |
| TGACCTTTCCGCTGACTCTA+TGG | 0.237106 | 3_4:-65783646 | Msa0514890:three_prime_UTR |
| CAAAATTTATCCGCTTATTA+TGG | 0.237697 | 3_4:-65784893 | Msa0514890:CDS |
| CAATAGCATTTGAAAGTTCT+TGG | 0.239288 | 3_4:+65790100 | None:intergenic |
| TATTATTTGCAGAATTCTTT+TGG | 0.241151 | 3_4:-65787092 | Msa0514890:intron |
| ATGACTTGCTCAAATACTTT+TGG | 0.241273 | 3_4:-65790264 | Msa0514890:CDS |
| TGTCTCTTCATCCATAGTTT+TGG | 0.243444 | 3_4:+65784296 | None:intergenic |
| AACCACAAGGCGGGCAATTA+GGG | 0.255023 | 3_4:-65789255 | Msa0514890:CDS |
| TTAAACTTGTCCCCAAATAA+AGG | 0.258247 | 3_4:+65784916 | None:intergenic |
| CATCTTCAAAACCTTGAATA+AGG | 0.267615 | 3_4:+65791195 | None:intergenic |
| AGTATTGTTTCTAAATTCTA+AGG | 0.268494 | 3_4:+65783675 | None:intergenic |
| CGCCTTGAAGAGGTCAAAAT+TGG | 0.276941 | 3_4:+65792999 | None:intergenic |
| ACAACGCCGTCCCTTTATTT+GGG | 0.282924 | 3_4:-65784927 | Msa0514890:CDS |
| CTCGCATCAGCGCCACCTCT+TGG | 0.288446 | 3_4:+65792974 | None:intergenic |
| AGCAAGTACGCTGCAATTAG+AGG | 0.298768 | 3_4:-65784240 | Msa0514890:CDS |
| TGAGGAAGTTGTATGATATA+GGG | 0.300928 | 3_4:+65785666 | None:intergenic |
| AGTTTGTTGCCACCGCGTTT+TGG | 0.301714 | 3_4:+65793049 | None:intergenic |
| TCTCGTCCCTGCTGATATTT+GGG | 0.304058 | 3_4:-65792717 | Msa0514890:CDS |
| CAAAACTGAAGCAGAGGATA+TGG | 0.304694 | 3_4:-65784791 | Msa0514890:CDS |
| TGCAGCGTACTTGCTGCTTA+TGG | 0.304776 | 3_4:+65784248 | None:intergenic |
| GGTGCATTTCTTCTTGGCTT+TGG | 0.312260 | 3_4:-65790231 | Msa0514890:CDS |
| AATGATGAATATCATCAAAA+AGG | 0.323079 | 3_4:+65783882 | None:intergenic |
| GGGATCCTTATTTAATACTT+TGG | 0.324766 | 3_4:-65788561 | Msa0514890:CDS |
| AAGCAGGAGTGGGAGCCTTA+TGG | 0.325612 | 3_4:-65790295 | Msa0514890:intron |
| GGATCCTTATTTAATACTTT+GGG | 0.327645 | 3_4:-65788560 | Msa0514890:intron |
| TTGAGGAAGTTGTATGATAT+AGG | 0.327982 | 3_4:+65785665 | None:intergenic |
| TACTACTCTTTGTTCAAAAT+CGG | 0.331193 | 3_4:-65785878 | Msa0514890:CDS |
| CATCCAGTTTGACAGCCATT+TGG | 0.337713 | 3_4:+65790130 | None:intergenic |
| TGGAGCACCATCTTCGGGTT+TGG | 0.340533 | 3_4:-65784121 | Msa0514890:CDS |
| ATCCAGTTTGACAGCCATTT+GGG | 0.348188 | 3_4:+65790131 | None:intergenic |
| ATTACCCAAAGTATTAAATA+AGG | 0.349352 | 3_4:+65788556 | None:intergenic |
| TTCAGCTGGAGCACCATCTT+CGG | 0.350183 | 3_4:-65784127 | Msa0514890:CDS |
| TGCCCAAATGGCTGTCAAAC+TGG | 0.351462 | 3_4:-65790133 | Msa0514890:CDS |
| AGCACCATTCCCGTTGTTAG+AGG | 0.360366 | 3_4:+65792833 | None:intergenic |
| CTTGAACAAGGGCGCAAAAT+CGG | 0.364439 | 3_4:-65784592 | Msa0514890:CDS |
| TATGGTTACATACACCGTTT+TGG | 0.368794 | 3_4:-65784875 | Msa0514890:CDS |
| CGGAGGTATATCCAAAACTA+TGG | 0.369717 | 3_4:-65784307 | Msa0514890:CDS |
| TTGAACAAGGGCGCAAAATC+GGG | 0.378695 | 3_4:-65784591 | Msa0514890:CDS |
| GCAATTAGGGGAAAATGATA+TGG | 0.380335 | 3_4:-65789242 | Msa0514890:CDS |
| TCAGCTGGAGCACCATCTTC+GGG | 0.382820 | 3_4:-65784126 | Msa0514890:CDS |
| AGCAGGGACGAGAATGATAA+TGG | 0.384683 | 3_4:+65792727 | None:intergenic |
| ATCTTCAAAACCTTGAATAA+GGG | 0.385541 | 3_4:+65791196 | None:intergenic |
| GTGAAATTCCTAAAAGCATC+TGG | 0.388838 | 3_4:-65790203 | Msa0514890:CDS |
| ACAAAGCTAAAGCAGCTATA+TGG | 0.389333 | 3_4:+65783572 | None:intergenic |
| TATGAACGCCGCAAGTCAAC+TGG | 0.391408 | 3_4:-65788754 | Msa0514890:CDS |
| TTCCCACAAAATTGCCCAAA+TGG | 0.393163 | 3_4:-65790145 | Msa0514890:CDS |
| AGCAGAGGATATGGATGGTT+TGG | 0.400479 | 3_4:-65784782 | Msa0514890:CDS |
| ACATCTGCTTGGAAGTTGCT+TGG | 0.405047 | 3_4:+65789456 | None:intergenic |
| CAACGGACTTGATATTGAAT+CGG | 0.409675 | 3_4:-65784536 | Msa0514890:CDS |
| AGCAGGAGTGGGAGCCTTAT+GGG | 0.410727 | 3_4:-65790294 | Msa0514890:intron |
| TAAACTTGTCCCCAAATAAA+GGG | 0.411598 | 3_4:+65784917 | None:intergenic |
| GCTGTGGCACCCCTTATTCA+AGG | 0.413324 | 3_4:-65791206 | Msa0514890:CDS |
| CCTGTTCGGACTGGCAAGTT+GGG | 0.417625 | 3_4:-65788581 | Msa0514890:CDS |
| CACTTCTTCAGTAATTAAAT+CGG | 0.419202 | 3_4:+65784332 | None:intergenic |
| TCGTCAATAACATTCATATA+AGG | 0.419796 | 3_4:+65789413 | None:intergenic |
| CATCTGCTTGGAAGTTGCTT+GGG | 0.419895 | 3_4:+65789457 | None:intergenic |
| CAGCCTAAAGATGAAAAGAT+AGG | 0.420719 | 3_4:-65783744 | Msa0514890:three_prime_UTR |
| TATCTAATTGTGGGATCCAT+TGG | 0.421566 | 3_4:-65791113 | Msa0514890:CDS |
| TGACGATATGCTTACTCAAA+TGG | 0.422170 | 3_4:-65789396 | Msa0514890:intron |
| CTTGGTCTTCTATCTAATTG+TGG | 0.424052 | 3_4:-65791123 | Msa0514890:CDS |
| ATTGGAGTTTAAAGTCTGAA+TGG | 0.424541 | 3_4:+65793017 | None:intergenic |
| TATCTATGATTGCAGCGAAT+GGG | 0.425215 | 3_4:-65784958 | Msa0514890:intron |
| CTAAACTAAGGCGTCATCTT+CGG | 0.426988 | 3_4:-65789192 | Msa0514890:CDS |
| CCTCGTCATTGTAAGTAACT+TGG | 0.428128 | 3_4:+65783932 | None:intergenic |
| CAGAGTTTCAAGTCCAACAT+AGG | 0.440272 | 3_4:-65784066 | Msa0514890:CDS |
| CCGCCTTGTGGTTTGAATGA+AGG | 0.440418 | 3_4:+65789265 | None:intergenic |
| TTGGAGTTTAAAGTCTGAAT+GGG | 0.444842 | 3_4:+65793018 | None:intergenic |
| CCCAACTTGCCAGTCCGAAC+AGG | 0.446107 | 3_4:+65788581 | None:intergenic |
| AGCACGTATCTAGGAACATC+TGG | 0.446451 | 3_4:+65792785 | None:intergenic |
| GATGAAGAGACAAGGAGATA+TGG | 0.447213 | 3_4:-65784285 | Msa0514890:CDS |
| ATCTCGCTTCCTCTAACAAC+GGG | 0.449941 | 3_4:-65792842 | Msa0514890:CDS |
| AACGGACTTGATATTGAATC+GGG | 0.450684 | 3_4:-65784535 | Msa0514890:CDS |
| GACTAGTGTGCACGTTAACT+TGG | 0.451193 | 3_4:-65791141 | Msa0514890:CDS |
| TTCATCAAGCGCAGAATAAG+AGG | 0.451328 | 3_4:+65784170 | None:intergenic |
| TTGGTCTTCTATCTAATTGT+GGG | 0.454361 | 3_4:-65791122 | Msa0514890:CDS |
| TTAAGGAAACAAGTTGAGAA+AGG | 0.458142 | 3_4:-65787060 | Msa0514890:CDS |
| TTCTTCTCATTATGATGCAC+AGG | 0.460422 | 3_4:-65791076 | Msa0514890:CDS |
| TCTTATTCTGCGCTTGATGA+AGG | 0.462589 | 3_4:-65784168 | Msa0514890:CDS |
| TTATCGTATCTTCCAACTCA+AGG | 0.467532 | 3_4:+65788782 | None:intergenic |
| TGAGTATATAACCTATGTAC+TGG | 0.469219 | 3_4:-65788809 | Msa0514890:CDS |
| CAGATGCACATGTACATTAG+TGG | 0.471011 | 3_4:+65785905 | None:intergenic |
| CATAAGTAAGTTAACTGAGC+TGG | 0.472174 | 3_4:+65785820 | None:intergenic |
| TAAAGAAACTATATTTGAAA+AGG | 0.474544 | 3_4:-65785621 | Msa0514890:intron |
| TTTCATCTTTAGGCTGCAAT+GGG | 0.475122 | 3_4:+65783751 | None:intergenic |
| TAAGTAACTTGGTTCAAAGA+TGG | 0.475479 | 3_4:+65783943 | None:intergenic |
| TTGTTAGAGGAAGCGAGATC+AGG | 0.477817 | 3_4:+65792846 | None:intergenic |
| CAAATTATCTTGTACAGTGA+TGG | 0.483366 | 3_4:-65783810 | Msa0514890:three_prime_UTR |
| AGAGTTTCAAGTCCAACATA+GGG | 0.488494 | 3_4:-65784065 | Msa0514890:CDS |
| ATCCCGCTTGGACATCTGCT+TGG | 0.488961 | 3_4:+65789445 | None:intergenic |
| GCGCAAAATCGGGGAAGAGC+AGG | 0.491919 | 3_4:-65784581 | Msa0514890:CDS |
| ACACGTTTATAAACTCGTAA+AGG | 0.492225 | 3_4:+65793155 | None:intergenic |
| GAGGAAGTTGTATGATATAG+GGG | 0.492511 | 3_4:+65785667 | None:intergenic |
| CAACGCCGTCCCTTTATTTG+GGG | 0.494059 | 3_4:-65784926 | Msa0514890:CDS |
| GCATCTGGAGAAATGCTGAT+TGG | 0.499524 | 3_4:-65790188 | Msa0514890:CDS |
| TCCCCTAATTGCCCGCCTTG+TGG | 0.501900 | 3_4:+65789253 | None:intergenic |
| ACCTGTTCGGACTGGCAAGT+TGG | 0.503123 | 3_4:-65788582 | Msa0514890:CDS |
| CCTCTTGGCGCGCCTTGAAG+AGG | 0.503470 | 3_4:+65792989 | None:intergenic |
| GTACGCTGCAATTAGAGGGC+AGG | 0.507649 | 3_4:-65784235 | Msa0514890:CDS |
| TCATTATGATGCACAGGACC+TGG | 0.509715 | 3_4:-65791070 | Msa0514890:intron |
| ATCATTTGGCAAGAGCCTAC+AGG | 0.511748 | 3_4:-65783865 | Msa0514890:three_prime_UTR |
| TTAACTGAGCTGGTTTGTCT+GGG | 0.512639 | 3_4:+65785830 | None:intergenic |
| ACGGCAAACACAGGAAAATA+CGG | 0.512908 | 3_4:-65784022 | Msa0514890:CDS |
| TGTAAAATAATTAGTCCGGA+TGG | 0.513683 | 3_4:+65784757 | None:intergenic |
| GACCTTTCCGCTGACTCTAT+GGG | 0.514744 | 3_4:-65783645 | Msa0514890:three_prime_UTR |
| TATAAAATCCGTTCGAACAC+AGG | 0.517451 | 3_4:-65786944 | Msa0514890:CDS |
| AGGAGTATTATAGATACAAA+AGG | 0.519923 | 3_4:-65789159 | Msa0514890:intron |
| AAGTCATGGCAAATCCCATA+AGG | 0.521001 | 3_4:+65790280 | None:intergenic |
| TGAATATATGAATCCAAGCC+AGG | 0.522345 | 3_4:+65783515 | None:intergenic |
| AGCAGGTTGTTCCACTTGCA+AGG | 0.522946 | 3_4:-65784564 | Msa0514890:CDS |
| CCGCTGACTCTATGGGAACA+TGG | 0.524464 | 3_4:-65783638 | Msa0514890:three_prime_UTR |
| ACGGTGAAAAGCACGTATCT+AGG | 0.525843 | 3_4:+65792776 | None:intergenic |
| CTTCGGGTTTGGCTTCGACA+TGG | 0.526937 | 3_4:-65784110 | Msa0514890:CDS |
| ATAGCTTCTCACAATGAGAA+TGG | 0.527440 | 3_4:-65791860 | Msa0514890:CDS |
| TTCACGTTGAGGTACTTCGC+TGG | 0.527462 | 3_4:-65792809 | Msa0514890:CDS |
| CCGTTGAAATTCCTTGCAAG+TGG | 0.528401 | 3_4:+65784553 | None:intergenic |
| TAATCGCGTTTGTGTGTGAA+AGG | 0.528663 | 3_4:-65792894 | Msa0514890:five_prime_UTR |
| AACACAGGAGCTACTTGTGC+AGG | 0.533359 | 3_4:-65786929 | Msa0514890:intron |
| AAATTATCTTGTACAGTGAT+GGG | 0.533896 | 3_4:-65783809 | Msa0514890:three_prime_UTR |
| GATCTCGCTTCCTCTAACAA+CGG | 0.537993 | 3_4:-65792843 | Msa0514890:CDS |
| GACCGAGGCGAATGAGATTG+AGG | 0.539105 | 3_4:+65785648 | None:intergenic |
| AGTAATTCTAGAAATTCAGC+TGG | 0.539123 | 3_4:-65784141 | Msa0514890:CDS |
| AGAAGTCAATGGCTAAACTA+AGG | 0.542357 | 3_4:-65789204 | Msa0514890:CDS |
| TATCGTATCTTCCAACTCAA+GGG | 0.546729 | 3_4:+65788783 | None:intergenic |
| ATGGATGGTTTGGATCCATC+CGG | 0.547244 | 3_4:-65784772 | Msa0514890:CDS |
| ATTCAAGCATCAGACCTGTT+CGG | 0.547965 | 3_4:-65788595 | Msa0514890:CDS |
| TTCCTCAATCTCATTCGCCT+CGG | 0.548073 | 3_4:-65785650 | Msa0514890:CDS |
| AAAGGGAGAAAGAGAGATGT+GGG | 0.550225 | 3_4:-65792876 | Msa0514890:exon |
| AGCATCAGACCTGTTCGGAC+TGG | 0.552727 | 3_4:-65788590 | Msa0514890:CDS |
| GAGCGGTCTTGGCTTGAACA+AGG | 0.552878 | 3_4:-65784604 | Msa0514890:CDS |
| CCACTTGCAAGGAATTTCAA+CGG | 0.553080 | 3_4:-65784553 | Msa0514890:CDS |
| GTCGAAGCCAAACCCGAAGA+TGG | 0.553952 | 3_4:+65784114 | None:intergenic |
| TACAATGACGAGGATTAAGA+TGG | 0.555603 | 3_4:-65783922 | Msa0514890:exon |
| AGTACCGCCCAAATATCAGC+AGG | 0.559037 | 3_4:+65792710 | None:intergenic |
| TACGCTGCAATTAGAGGGCA+GGG | 0.559127 | 3_4:-65784234 | Msa0514890:CDS |
| CTTCAAGGCGCGCCAAGAGG+TGG | 0.559778 | 3_4:-65792986 | Msa0514890:five_prime_UTR |
| CAATAACACTTTACACCTGT+AGG | 0.559809 | 3_4:+65783850 | None:intergenic |
| CAGGAAAATACGGTCTCTCG+TGG | 0.565236 | 3_4:-65784012 | Msa0514890:CDS |
| GAAGTTGCTTGCAACCAAAA+CGG | 0.565444 | 3_4:+65784861 | None:intergenic |
| TGATACAGATGAGAAGTCAA+TGG | 0.567799 | 3_4:-65789215 | Msa0514890:CDS |
| ATCTATGATTGCAGCGAATG+GGG | 0.568014 | 3_4:-65784957 | Msa0514890:intron |
| GCAAGTACGCTGCAATTAGA+GGG | 0.570104 | 3_4:-65784239 | Msa0514890:CDS |
| CTTCATTCAAACCACAAGGC+GGG | 0.573322 | 3_4:-65789264 | Msa0514890:CDS |
| TCTTCAAAACCTTGAATAAG+GGG | 0.580909 | 3_4:+65791197 | None:intergenic |
| ACGAGGATTAAGATGGAAGC+CGG | 0.581615 | 3_4:-65783915 | Msa0514890:exon |
| TGTACTGGAAGCCCTTGAGT+TGG | 0.582002 | 3_4:-65788794 | Msa0514890:CDS |
| AAGTAGCTCCTGTGTTCGAA+CGG | 0.584062 | 3_4:+65786936 | None:intergenic |
| AATAATTCCGAAAAGACCAA+TGG | 0.585598 | 3_4:+65791097 | None:intergenic |
| TTCCAAGCAGATGTCCAAGC+GGG | 0.587731 | 3_4:-65789447 | Msa0514890:CDS |
| GTGGGAAAGAACTTTCTGGC+GGG | 0.588522 | 3_4:+65790161 | None:intergenic |
| GTATTTCTTCAGGAGAGGAA+CGG | 0.591443 | 3_4:-65784375 | Msa0514890:intron |
| AATCGCGTTTGTGTGTGAAA+GGG | 0.593753 | 3_4:-65792893 | Msa0514890:five_prime_UTR |
| ACATGGCAAACAATGAAGAC+AGG | 0.594497 | 3_4:-65784093 | Msa0514890:CDS |
| AAAAGTATTTGAGCAAGTCA+TGG | 0.600122 | 3_4:+65790266 | None:intergenic |
| AGCGGTCTTGGCTTGAACAA+GGG | 0.602451 | 3_4:-65784603 | Msa0514890:CDS |
| TTAATTACTGAAGAAGTGAA+CGG | 0.603520 | 3_4:-65784327 | Msa0514890:CDS |
| AGGTCTCAAAGGATCCCGCT+TGG | 0.604904 | 3_4:+65789433 | None:intergenic |
| TTTACCCCTACGGCAAACAC+AGG | 0.604921 | 3_4:-65784031 | Msa0514890:CDS |
| CGTCCCTGCTGATATTTGGG+CGG | 0.611244 | 3_4:-65792714 | Msa0514890:intron |
| TCATCTTCGGAATGCTCGTG+AGG | 0.613725 | 3_4:-65789179 | Msa0514890:CDS |
| TAGTTTCTTTATTAGGACCG+AGG | 0.614327 | 3_4:+65785633 | None:intergenic |
| ACATTCATATAAGGTCTCAA+AGG | 0.619065 | 3_4:+65789422 | None:intergenic |
| CCAAGTTACTTACAATGACG+AGG | 0.620005 | 3_4:-65783932 | Msa0514890:CDS |
| GCTTCCTCTAACAACGGGAA+TGG | 0.622110 | 3_4:-65792837 | Msa0514890:CDS |
| CTGCAATTAGAGGGCAGGGT+GGG | 0.622483 | 3_4:-65784230 | Msa0514890:CDS |
| AAAAGCGATAGATCAATGCT+AGG | 0.623744 | 3_4:+65786976 | None:intergenic |
| CCTCTTCAAGGCGCGCCAAG+AGG | 0.624523 | 3_4:-65792989 | Msa0514890:five_prime_UTR |
| CAAACCATCCAGTTGACTTG+CGG | 0.625928 | 3_4:+65788746 | None:intergenic |
| TGAACAAGGGCGCAAAATCG+GGG | 0.626860 | 3_4:-65784590 | Msa0514890:CDS |
| ACCACAAGGCGGGCAATTAG+GGG | 0.627913 | 3_4:-65789254 | Msa0514890:CDS |
| GAAAGGGAGAAAGAGAGATG+TGG | 0.630616 | 3_4:-65792877 | Msa0514890:exon |
| AACTCGTAAAGGTTACTGAA+CGG | 0.630908 | 3_4:+65793166 | None:intergenic |
| CCATGTTCCCATAGAGTCAG+CGG | 0.631054 | 3_4:+65783638 | None:intergenic |
| AGGAAGTTGTATGATATAGG+GGG | 0.634202 | 3_4:+65785668 | None:intergenic |
| ACTGAAGCAGAGGATATGGA+TGG | 0.638835 | 3_4:-65784787 | Msa0514890:CDS |
| CTTGTCCCCAAATAAAGGGA+CGG | 0.643271 | 3_4:+65784921 | None:intergenic |
| GTGTATGTAACCATAATAAG+CGG | 0.646657 | 3_4:+65784883 | None:intergenic |
| CTCAAGGGCTTCCAGTACAT+AGG | 0.647494 | 3_4:+65788798 | None:intergenic |
| CTCATCAAGTGACTCAGACG+AGG | 0.649535 | 3_4:+65783987 | None:intergenic |
| TTCCCATAGAGTCAGCGGAA+AGG | 0.649892 | 3_4:+65783643 | None:intergenic |
| GAGTTTCAAGTCCAACATAG+GGG | 0.653222 | 3_4:-65784064 | Msa0514890:CDS |
| GATTATAGATCGAAATTGTG+AGG | 0.655925 | 3_4:+65792931 | None:intergenic |
| CCCCGGAAACCAAAACGCGG+TGG | 0.662179 | 3_4:-65793058 | Msa0514890:five_prime_UTR |
| GCTTCTCACAATGAGAATGG+AGG | 0.663834 | 3_4:-65791857 | Msa0514890:CDS |
| GAAACAAGTTGAGAAAGGCA+TGG | 0.668398 | 3_4:-65787055 | Msa0514890:CDS |
| AACGCCGCAAGTCAACTGGA+TGG | 0.668525 | 3_4:-65788750 | Msa0514890:intron |
| TGTGGGAAAGAACTTTCTGG+CGG | 0.668683 | 3_4:+65790160 | None:intergenic |
| GATCCTTCATTCAAACCACA+AGG | 0.673960 | 3_4:-65789268 | Msa0514890:CDS |
| AAACTATGGATGAAGAGACA+AGG | 0.676921 | 3_4:-65784293 | Msa0514890:CDS |
| TGAATCGGGTAACAACTATG+TGG | 0.678863 | 3_4:-65784521 | Msa0514890:intron |
| AGGAAAATACGGTCTCTCGT+GGG | 0.680794 | 3_4:-65784011 | Msa0514890:CDS |
| ACAGAACCAAGTATATCCAA+CGG | 0.692277 | 3_4:+65792757 | None:intergenic |
| TATAGATCGAAATTGTGAGG+TGG | 0.696239 | 3_4:+65792934 | None:intergenic |
| ATTACTGAAGAAGTGAACGG+AGG | 0.701852 | 3_4:-65784324 | Msa0514890:CDS |
| CTTCCAAGCAGATGTCCAAG+CGG | 0.707280 | 3_4:-65789448 | Msa0514890:CDS |
| CCTTCATTCAAACCACAAGG+CGG | 0.708725 | 3_4:-65789265 | Msa0514890:CDS |
| GCTGCAATTAGAGGGCAGGG+TGG | 0.716544 | 3_4:-65784231 | Msa0514890:CDS |
| GTACCGCCCAAATATCAGCA+GGG | 0.734973 | 3_4:+65792711 | None:intergenic |
| TTTCCCCGGAAACCAAAACG+CGG | 0.774263 | 3_4:-65793061 | Msa0514890:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAGGATATAAATATAAT+TGG | + | chr3_4:65790983-65791002 | None:intergenic | 10.0% |
| !!! | AGGAAATATATAAGTTTTTA+CGG | - | chr3_4:65785423-65785442 | Msa0514890:intron | 15.0% |
| !!! | AGGAAAATAATTTTAATATG+AGG | + | chr3_4:65785465-65785484 | None:intergenic | 15.0% |
| !!! | ATTATTGGATATTTTAATGA+TGG | - | chr3_4:65785912-65785931 | Msa0514890:CDS | 15.0% |
| !! | GAATAGAATGAAAAAATAAT+AGG | + | chr3_4:65786057-65786076 | None:intergenic | 15.0% |
| !! | TTCGTTTATTTGAATTATAT+AGG | - | chr3_4:65787215-65787234 | Msa0514890:intron | 15.0% |
| !! | AAATTATAGCATGAAAATTT+GGG | + | chr3_4:65788072-65788091 | None:intergenic | 15.0% |
| !! | ATATATATATATATAGAGTC+AGG | - | chr3_4:65788257-65788276 | Msa0514890:intron | 15.0% |
| !!! | CTTTTAATTTTTGTTTTGTT+GGG | + | chr3_4:65788365-65788384 | None:intergenic | 15.0% |
| !!! | TCTTTTAATTTTTGTTTTGT+TGG | + | chr3_4:65788366-65788385 | None:intergenic | 15.0% |
| !! | AAAATTAAAAGAACAAATAG+AGG | - | chr3_4:65788374-65788393 | Msa0514890:intron | 15.0% |
| !! | ATGATTGTTCTTAAAATTAT+TGG | - | chr3_4:65788657-65788676 | Msa0514890:intron | 15.0% |
| !! | TGATTGTTCTTAAAATTATT+GGG | - | chr3_4:65788658-65788677 | Msa0514890:intron | 15.0% |
| !!! | TATTTTGTTAGATCTTTATT+AGG | + | chr3_4:65788692-65788711 | None:intergenic | 15.0% |
| !! | AAAGATCTAACAAAATAAAT+TGG | - | chr3_4:65788695-65788714 | Msa0514890:intron | 15.0% |
| !! | AAGATCTAACAAAATAAATT+GGG | - | chr3_4:65788696-65788715 | Msa0514890:intron | 15.0% |
| !! | TATATATATATATATGAGTC+AGG | + | chr3_4:65789005-65789024 | None:intergenic | 15.0% |
| !!! | TTAGAGAATTTTTTATATGT+TGG | - | chr3_4:65789805-65789824 | Msa0514890:intron | 15.0% |
| !! | GTAATTTAGAAGTTAATATT+AGG | - | chr3_4:65790057-65790076 | Msa0514890:intron | 15.0% |
| !! | TAACATAATATCAAGATATT+GGG | - | chr3_4:65790102-65790121 | Msa0514890:CDS | 15.0% |
| !! | TCAAATATAGTTTCTTTATT+AGG | + | chr3_4:65791075-65791094 | None:intergenic | 15.0% |
| !! | TAAAGAAACTATATTTGAAA+AGG | - | chr3_4:65791077-65791096 | Msa0514890:CDS | 15.0% |
| !!! | CTATTTCTTCATTAAATTTA+TGG | - | chr3_4:65791464-65791483 | Msa0514890:intron | 15.0% |
| !!! | TTTTTGTAAAATAATTAGTC+CGG | + | chr3_4:65791948-65791967 | None:intergenic | 15.0% |
| !!! | TTTTTAACTGTTAGTATCTT+AGG | - | chr3_4:65784088-65784107 | Msa0514890:CDS | 20.0% |
| !! | TTCAACTTTATATCGTTATA+AGG | - | chr3_4:65784737-65784756 | Msa0514890:intron | 20.0% |
| !! | TGCATTATTTCATTCAATAA+TGG | - | chr3_4:65784793-65784812 | Msa0514890:CDS | 20.0% |
| !! | AAATCACAAAAACTTGAAAT+TGG | + | chr3_4:65784923-65784942 | None:intergenic | 20.0% |
| !! | CCATATCATGATTAATATTT+CGG | + | chr3_4:65785401-65785420 | None:intergenic | 20.0% |
| !!! | TTAAAATTATTTTCCTAAGC+AGG | - | chr3_4:65785469-65785488 | Msa0514890:intron | 20.0% |
| !!! | TAAAATTATTTTCCTAAGCA+GGG | - | chr3_4:65785470-65785489 | Msa0514890:intron | 20.0% |
| !! | TTATCAGAAATGGAATAAAT+CGG | - | chr3_4:65785884-65785903 | Msa0514890:CDS | 20.0% |
| !! | AATAAATCGGAACATATTAT+TGG | - | chr3_4:65785897-65785916 | Msa0514890:CDS | 20.0% |
| !!! | TATTTGTCTATTTTTTGTCA+TGG | - | chr3_4:65786264-65786283 | Msa0514890:intron | 20.0% |
| !! | AATCATTCCTATAAAAAGTA+TGG | + | chr3_4:65786361-65786380 | None:intergenic | 20.0% |
| !!! | TGCAATATATTTTTTTTGTG+CGG | - | chr3_4:65787083-65787102 | Msa0514890:CDS | 20.0% |
| !! | TCAAAATTCTCAATCAAATA+AGG | + | chr3_4:65787350-65787369 | None:intergenic | 20.0% |
| !! | ATTTAGCATAAATGTTGTAA+CGG | + | chr3_4:65787613-65787632 | None:intergenic | 20.0% |
| !! | TATATATATATCACGACATA+TGG | + | chr3_4:65787719-65787738 | None:intergenic | 20.0% |
| !! | ACAAAACAGAAAACAAAATT+AGG | + | chr3_4:65787980-65787999 | None:intergenic | 20.0% |
| !!! | AATTTTGTTTTCTGTTTTGT+TGG | - | chr3_4:65787980-65787999 | Msa0514890:intron | 20.0% |
| !! | GAAATTATAGCATGAAAATT+TGG | + | chr3_4:65788073-65788092 | None:intergenic | 20.0% |
| !!! | AATTTTCATGCTATAATTTC+AGG | - | chr3_4:65788073-65788092 | Msa0514890:intron | 20.0% |
| !!! | ATTTTCATGCTATAATTTCA+GGG | - | chr3_4:65788074-65788093 | Msa0514890:intron | 20.0% |
| !!! | ATTACCCAAAGTATTAAATA+AGG | + | chr3_4:65788145-65788164 | None:intergenic | 20.0% |
| !!! | TTTTGAAACTTACATTAATC+TGG | - | chr3_4:65788498-65788517 | Msa0514890:intron | 20.0% |
| !!! | TTTGAAACTTACATTAATCT+GGG | - | chr3_4:65788499-65788518 | Msa0514890:intron | 20.0% |
| !! | ATGTAATATGAATTGTGATA+AGG | + | chr3_4:65788567-65788586 | None:intergenic | 20.0% |
| !! | TATCACAATTCATATTACAT+TGG | - | chr3_4:65788567-65788586 | Msa0514890:CDS | 20.0% |
| !!! | ACTTATTTAGAATTATTGAG+TGG | + | chr3_4:65788599-65788618 | None:intergenic | 20.0% |
| !! | CAATAATTCTAAATAAGTCA+TGG | - | chr3_4:65788601-65788620 | Msa0514890:CDS | 20.0% |
| !! | TTTCACAGAATCAAAATAAT+TGG | - | chr3_4:65788761-65788780 | Msa0514890:CDS | 20.0% |
| !!! | TTTTGATTAGATTTTTGTGA+TGG | - | chr3_4:65789088-65789107 | Msa0514890:intron | 20.0% |
| !! | AGATCAATATTCAATAGAAT+AGG | + | chr3_4:65789223-65789242 | None:intergenic | 20.0% |
| !!! | TATTATTTGCAGAATTCTTT+TGG | - | chr3_4:65789606-65789625 | Msa0514890:intron | 20.0% |
| !!! | GAACACAAATTTTATAAGAA+TGG | + | chr3_4:65789871-65789890 | None:intergenic | 20.0% |
| !! | CTTATAAAATTTGTGTTCTT+CGG | - | chr3_4:65789873-65789892 | Msa0514890:intron | 20.0% |
| !! | CTAACATAATATCAAGATAT+TGG | - | chr3_4:65790101-65790120 | Msa0514890:CDS | 20.0% |
| !!! | CCAATTTTTGCTTATATTTT+GGG | + | chr3_4:65790301-65790320 | None:intergenic | 20.0% |
| !!! | ACCAATTTTTGCTTATATTT+TGG | + | chr3_4:65790300-65790319 | None:intergenic | 20.0% |
| !! | TCAACAAAAGTTAATGTATT+TGG | + | chr3_4:65790281-65790300 | None:intergenic | 20.0% |
| !!! | ACCAATTTTTGCTTATATTT+TGG | - | chr3_4:65790300-65790319 | Msa0514890:intron | 20.0% |
| !!! | CCAATTTTTGCTTATATTTT+GGG | - | chr3_4:65790301-65790320 | Msa0514890:intron | 20.0% |
| !!! | ATGTGATTTTCTTCTAAAAT+AGG | - | chr3_4:65790385-65790404 | Msa0514890:intron | 20.0% |
| !! | TAATGCAAACAAATTACTAA+TGG | - | chr3_4:65790469-65790488 | Msa0514890:intron | 20.0% |
| !!! | TTGTTGTATTTTACAATACA+GGG | + | chr3_4:65790654-65790673 | None:intergenic | 20.0% |
| !!! | ATTGTTGTATTTTACAATAC+AGG | + | chr3_4:65790655-65790674 | None:intergenic | 20.0% |
| !! | AAATATAGGTTATCTTATGT+TGG | + | chr3_4:65791528-65791547 | None:intergenic | 20.0% |
| !! | ACAACAAAACTAAGAAATAT+AGG | + | chr3_4:65791542-65791561 | None:intergenic | 20.0% |
| !!! | TGACAAAGTATTTAATTTTC+TGG | - | chr3_4:65791862-65791881 | Msa0514890:CDS | 20.0% |
| !!! | GACAAAGTATTTAATTTTCT+GGG | - | chr3_4:65791863-65791882 | Msa0514890:CDS | 20.0% |
| !!! | ACAAAGTATTTAATTTTCTG+GGG | - | chr3_4:65791864-65791883 | Msa0514890:CDS | 20.0% |
| !!! | GGACTAATTATTTTACAAAA+AGG | - | chr3_4:65791947-65791966 | Msa0514890:intron | 20.0% |
| !!! | ACTAAAGTTTTAACAACAAT+GGG | + | chr3_4:65791988-65792007 | None:intergenic | 20.0% |
| !!! | AACTAAAGTTTTAACAACAA+TGG | + | chr3_4:65791989-65792008 | None:intergenic | 20.0% |
| !! | AATGATGAATATCATCAAAA+AGG | + | chr3_4:65792819-65792838 | None:intergenic | 20.0% |
| !!! | TTTTGATGATATTCATCATT+TGG | - | chr3_4:65792819-65792838 | Msa0514890:CDS | 20.0% |
| !!! | AGTATTGTTTCTAAATTCTA+AGG | + | chr3_4:65793026-65793045 | None:intergenic | 20.0% |
| !!! | ATATAAAACAAAATTTTGCC+TGG | - | chr3_4:65793165-65793184 | Msa0514890:five_prime_UTR | 20.0% |
| ! | GTAGAAAAACAATGTTGAAT+TGG | - | chr3_4:65784229-65784248 | Msa0514890:CDS | 25.0% |
| ! | CTTAATGCATTAAGGTATAT+TGG | + | chr3_4:65784297-65784316 | None:intergenic | 25.0% |
| ! | CAATATACCTTAATGCATTA+AGG | - | chr3_4:65784295-65784314 | Msa0514890:CDS | 25.0% |
| ! | TTACAAAAGTTTAGGTCATT+GGG | + | chr3_4:65784401-65784420 | None:intergenic | 25.0% |
| !! | AATGACCTAAACTTTTGTAA+GGG | - | chr3_4:65784401-65784420 | Msa0514890:intron | 25.0% |
| !! | TGGTTTTTAAATTAGAAACC+AGG | - | chr3_4:65784454-65784473 | Msa0514890:intron | 25.0% |
| !! | GGTTTTTAAATTAGAAACCA+GGG | - | chr3_4:65784455-65784474 | Msa0514890:intron | 25.0% |
| !! | GTTTTTAAATTAGAAACCAG+GGG | - | chr3_4:65784456-65784475 | Msa0514890:intron | 25.0% |
| !!! | CATATTTTTTGTCAACACTT+TGG | + | chr3_4:65784543-65784562 | None:intergenic | 25.0% |
| ! | AGCTTAACCACAAAATAAAA+AGG | + | chr3_4:65784599-65784618 | None:intergenic | 25.0% |
| ! | GAAAAAAATGTACTGTTTGA+AGG | + | chr3_4:65784720-65784739 | None:intergenic | 25.0% |
| ! | GTTATAAGGTGAAAATATTG+TGG | - | chr3_4:65784751-65784770 | Msa0514890:intron | 25.0% |
| ! | ATTAGATTAGATGCATAACA+AGG | + | chr3_4:65785123-65785142 | None:intergenic | 25.0% |
| ! | CCGAAATATTAATCATGATA+TGG | - | chr3_4:65785398-65785417 | Msa0514890:intron | 25.0% |
| ! | ATATTAATCATGATATGGCA+AGG | - | chr3_4:65785403-65785422 | Msa0514890:intron | 25.0% |
| ! | ATCTTCAAAACCTTGAATAA+GGG | + | chr3_4:65785505-65785524 | None:intergenic | 25.0% |
| ! | ATCAACGATTACAAAAAGTA+AGG | + | chr3_4:65785673-65785692 | None:intergenic | 25.0% |
| ! | TTTATTCCATTTCTGATAAG+AGG | + | chr3_4:65785883-65785902 | None:intergenic | 25.0% |
| ! | AAATAATAGGTTCCATTGTT+TGG | + | chr3_4:65786044-65786063 | None:intergenic | 25.0% |
| ! | TTATGATTGAATTGATGCAA+GGG | + | chr3_4:65786084-65786103 | None:intergenic | 25.0% |
| !!! | AATAGAGCCATACTTTTTAT+AGG | - | chr3_4:65786351-65786370 | Msa0514890:intron | 25.0% |
| ! | AAATATGCATTGTAGAGTAT+TGG | - | chr3_4:65786904-65786923 | Msa0514890:intron | 25.0% |
| ! | ACAAAGAAATGAAGAATTGA+CGG | + | chr3_4:65786963-65786982 | None:intergenic | 25.0% |
| !!! | GCAATATATTTTTTTTGTGC+GGG | - | chr3_4:65787084-65787103 | Msa0514890:intron | 25.0% |
| ! | TCGTCAATAACATTCATATA+AGG | + | chr3_4:65787288-65787307 | None:intergenic | 25.0% |
| ! | TCTAAACAAAGATAGCAATA+CGG | + | chr3_4:65787381-65787400 | None:intergenic | 25.0% |
| !!! | AGGAGTATTATAGATACAAA+AGG | - | chr3_4:65787539-65787558 | Msa0514890:intron | 25.0% |
| !!! | TCAGTTATATTTTTACACTG+AGG | - | chr3_4:65787633-65787652 | Msa0514890:intron | 25.0% |
| !! | GGATCCTTATTTAATACTTT+GGG | - | chr3_4:65788138-65788157 | Msa0514890:intron | 25.0% |
| ! | TTGAAACTTACATTAATCTG+GGG | - | chr3_4:65788500-65788519 | Msa0514890:intron | 25.0% |
| ! | ATCCAAAATATTAAACCAGT+TGG | + | chr3_4:65788527-65788546 | None:intergenic | 25.0% |
| ! | TTCAATATTGGATTATACCA+AGG | - | chr3_4:65788727-65788746 | Msa0514890:intron | 25.0% |
| !!! | ACAAGATTAATTTGTATGAG+CGG | - | chr3_4:65788931-65788950 | Msa0514890:intron | 25.0% |
| !! | TAGAATAGGAATTTCTAAAG+AGG | + | chr3_4:65789209-65789228 | None:intergenic | 25.0% |
| ! | CAAAATAAATTTACCTCCTT+CGG | - | chr3_4:65789324-65789343 | Msa0514890:intron | 25.0% |
| ! | GATATGAGAGAATTTGAATA+TGG | - | chr3_4:65789351-65789370 | Msa0514890:intron | 25.0% |
| !!! | AAATATATTGACTTCTCACT+AGG | + | chr3_4:65789387-65789406 | None:intergenic | 25.0% |
| !!! | CTCATACATACTTTTGTTTT+TGG | - | chr3_4:65789408-65789427 | Msa0514890:CDS | 25.0% |
| ! | TTGCACTATTTAAACATTCA+AGG | - | chr3_4:65789504-65789523 | Msa0514890:intron | 25.0% |
| !! | ATTTTTCTGTCTTTCGAATA+AGG | - | chr3_4:65789537-65789556 | Msa0514890:intron | 25.0% |
| !! | CTTTCGAATAAGGAATATTT+TGG | - | chr3_4:65789547-65789566 | Msa0514890:intron | 25.0% |
| !!! | ATAAGGAATATTTTGGTTAG+AGG | - | chr3_4:65789554-65789573 | Msa0514890:intron | 25.0% |
| ! | AAATTGTGGGTTCTTATTAA+TGG | - | chr3_4:65789582-65789601 | Msa0514890:intron | 25.0% |
| !! | TTCGGATTTTAGATAAAAAG+AGG | - | chr3_4:65789891-65789910 | Msa0514890:intron | 25.0% |
| ! | TTTCCAATTTACTTAGGATT+AGG | + | chr3_4:65790008-65790027 | None:intergenic | 25.0% |
| !!! | TTTTTGCTTATATTTTGGGA+CGG | + | chr3_4:65790305-65790324 | None:intergenic | 25.0% |
| ! | CCCAAAATATAAGCAAAAAT+TGG | - | chr3_4:65790219-65790238 | Msa0514890:CDS | 25.0% |
| ! | TCAACGAAAGTTAATGTATT+TGG | - | chr3_4:65790242-65790261 | Msa0514890:CDS | 25.0% |
| ! | CCCAAAATATAAGCAAAAAT+TGG | + | chr3_4:65790219-65790238 | None:intergenic | 25.0% |
| !!! | TTTTTGCTTATATTTTGGGA+CGG | - | chr3_4:65790305-65790324 | Msa0514890:intron | 25.0% |
| ! | TACTACTCTTTGTTCAAAAT+CGG | - | chr3_4:65790820-65790839 | Msa0514890:intron | 25.0% |
| !!! | TTTATATCCTATTTTTTCCC+AGG | - | chr3_4:65790989-65791008 | Msa0514890:intron | 25.0% |
| ! | TAATTATCCAAACCATTAAG+AGG | - | chr3_4:65791256-65791275 | Msa0514890:intron | 25.0% |
| ! | AATTATCCAAACCATTAAGA+GGG | - | chr3_4:65791257-65791276 | Msa0514890:intron | 25.0% |
| ! | TAAATCTAAATCCCTCTTAA+TGG | + | chr3_4:65791271-65791290 | None:intergenic | 25.0% |
| ! | AGAGGGATTTAGATTTAATA+TGG | - | chr3_4:65791274-65791293 | Msa0514890:intron | 25.0% |
| ! | TCATTCAACTTGATTCATAT+AGG | - | chr3_4:65791301-65791320 | Msa0514890:intron | 25.0% |
| ! | TGCTTTCTTCAAAAATTGTT+TGG | - | chr3_4:65791373-65791392 | Msa0514890:intron | 25.0% |
| ! | CAAAAATCAAAATAGACAGA+AGG | + | chr3_4:65791504-65791523 | None:intergenic | 25.0% |
| ! | CAAAATTTATCCGCTTATTA+TGG | - | chr3_4:65791805-65791824 | Msa0514890:intron | 25.0% |
| !! | GTTAAAACTTTAGTTCAAGT+TGG | - | chr3_4:65791994-65792013 | Msa0514890:intron | 25.0% |
| !! | AATTACTTCCAATTTTGTGA+AGG | + | chr3_4:65792215-65792234 | None:intergenic | 25.0% |
| !! | TTGGAACTACTATTTTCTTT+TGG | - | chr3_4:65792271-65792290 | Msa0514890:intron | 25.0% |
| ! | CACTTCTTCAGTAATTAAAT+CGG | + | chr3_4:65792369-65792388 | None:intergenic | 25.0% |
| ! | TTAATTACTGAAGAAGTGAA+CGG | - | chr3_4:65792371-65792390 | Msa0514890:intron | 25.0% |
| ! | AAATTATCTTGTACAGTGAT+GGG | - | chr3_4:65792889-65792908 | Msa0514890:five_prime_UTR | 25.0% |
| ACACGTTTATAAACTCGTAA+AGG | + | chr3_4:65783546-65783565 | None:intergenic | 30.0% | |
| ! | TTGGAGTTTAAAGTCTGAAT+GGG | + | chr3_4:65783683-65783702 | None:intergenic | 30.0% |
| ! | ATTGGAGTTTAAAGTCTGAA+TGG | + | chr3_4:65783684-65783703 | None:intergenic | 30.0% |
| GATTATAGATCGAAATTGTG+AGG | + | chr3_4:65783770-65783789 | None:intergenic | 30.0% | |
| ACTGTTAGTATCTTAGGTTT+AGG | - | chr3_4:65784094-65784113 | Msa0514890:CDS | 30.0% | |
| ! | TCTTAGGTTTAGGATATGAT+AGG | - | chr3_4:65784104-65784123 | Msa0514890:CDS | 30.0% |
| AATGCTATCTAGAAGGTTAT+TGG | - | chr3_4:65784207-65784226 | Msa0514890:CDS | 30.0% | |
| ! | ACCTTAATGCATTAAGGTTT+TGG | - | chr3_4:65784301-65784320 | Msa0514890:CDS | 30.0% |
| TCCAAAACCTTAATGCATTA+AGG | + | chr3_4:65784305-65784324 | None:intergenic | 30.0% | |
| CTTACAAAAGTTTAGGTCAT+TGG | + | chr3_4:65784402-65784421 | None:intergenic | 30.0% | |
| ! | CAATGACCTAAACTTTTGTA+AGG | - | chr3_4:65784400-65784419 | Msa0514890:intron | 30.0% |
| ! | ATGACCTAAACTTTTGTAAG+GGG | - | chr3_4:65784402-65784421 | Msa0514890:intron | 30.0% |
| AAAGATTTATAACGTCGGAA+AGG | - | chr3_4:65784479-65784498 | Msa0514890:intron | 30.0% | |
| AATGATGTAGATGTATTGTG+TGG | - | chr3_4:65784502-65784521 | Msa0514890:intron | 30.0% | |
| !!! | CTTCATGCCTTTTTATTTTG+TGG | - | chr3_4:65784589-65784608 | Msa0514890:CDS | 30.0% |
| TTGCCTCTTCTTTCATATTA+AGG | - | chr3_4:65784653-65784672 | Msa0514890:intron | 30.0% | |
| TGACCTTAATATGAAAGAAG+AGG | + | chr3_4:65784659-65784678 | None:intergenic | 30.0% | |
| AAGGTCAATTTGACTGTTAT+TGG | - | chr3_4:65784672-65784691 | Msa0514890:intron | 30.0% | |
| AGGTCAATTTGACTGTTATT+GGG | - | chr3_4:65784673-65784692 | Msa0514890:intron | 30.0% | |
| !!! | ATGGAGGTATTTCTTTCTTT+TGG | - | chr3_4:65784857-65784876 | Msa0514890:CDS | 30.0% |
| ACTAAAAACAAGGATTCTGA+AGG | + | chr3_4:65785086-65785105 | None:intergenic | 30.0% | |
| !!! | TCAGAATCCTTGTTTTTAGT+CGG | - | chr3_4:65785086-65785105 | Msa0514890:intron | 30.0% |
| TGCATTCATACTTACTCATA+AGG | + | chr3_4:65785235-65785254 | None:intergenic | 30.0% | |
| ! | GTGTTATTCATTACTACTTC+TGG | + | chr3_4:65785298-65785317 | None:intergenic | 30.0% |
| GTAGTAATGAATAACACATG+AGG | - | chr3_4:65785301-65785320 | Msa0514890:intron | 30.0% | |
| TCTTCAAAACCTTGAATAAG+GGG | + | chr3_4:65785504-65785523 | None:intergenic | 30.0% | |
| CATCTTCAAAACCTTGAATA+AGG | + | chr3_4:65785506-65785525 | None:intergenic | 30.0% | |
| ! | TTGGTCTTCTATCTAATTGT+GGG | - | chr3_4:65785576-65785595 | Msa0514890:intron | 30.0% |
| AATAATTCCGAAAAGACCAA+TGG | + | chr3_4:65785604-65785623 | None:intergenic | 30.0% | |
| ! | GACTCTAAAAAGCAATAACT+TGG | + | chr3_4:65785724-65785743 | None:intergenic | 30.0% |
| ! | TTGTTTGGAACAGAATTGAA+TGG | + | chr3_4:65786029-65786048 | None:intergenic | 30.0% |
| TTCAATTCTGTTCCAAACAA+TGG | - | chr3_4:65786029-65786048 | Msa0514890:intron | 30.0% | |
| GTTATGATTGAATTGATGCA+AGG | + | chr3_4:65786085-65786104 | None:intergenic | 30.0% | |
| ACTCTTCATTCAATTGTTAG+TGG | - | chr3_4:65786189-65786208 | Msa0514890:intron | 30.0% | |
| ! | TGATTGATACTTTTGTAAGC+AGG | - | chr3_4:65786387-65786406 | Msa0514890:intron | 30.0% |
| !! | AAAAGTATTTGAGCAAGTCA+TGG | + | chr3_4:65786435-65786454 | None:intergenic | 30.0% |
| !!! | ATGACTTGCTCAAATACTTT+TGG | - | chr3_4:65786434-65786453 | Msa0514890:intron | 30.0% |
| !!! | AATACTTTTGGACTTGTTAC+TGG | - | chr3_4:65786446-65786465 | Msa0514890:intron | 30.0% |
| CAATAGCATTTGAAAGTTCT+TGG | + | chr3_4:65786601-65786620 | None:intergenic | 30.0% | |
| !! | TTTCTAGAGCACATAAAGTT+TGG | - | chr3_4:65786711-65786730 | Msa0514890:intron | 30.0% |
| TAAGCCATATAAACAAGAAC+AGG | + | chr3_4:65786777-65786796 | None:intergenic | 30.0% | |
| TGGACAAAGAAAATTAGAGA+GGG | + | chr3_4:65786819-65786838 | None:intergenic | 30.0% | |
| ! | TCTAATTTTCTTTGTCCAGT+TGG | - | chr3_4:65786821-65786840 | Msa0514890:intron | 30.0% |
| AAAGAAATGAAGAATTGACG+GGG | + | chr3_4:65786961-65786980 | None:intergenic | 30.0% | |
| CAAAGAAATGAAGAATTGAC+GGG | + | chr3_4:65786962-65786981 | None:intergenic | 30.0% | |
| ! | TCTTCATTTCTTTGTCCTTT+TGG | - | chr3_4:65786968-65786987 | Msa0514890:CDS | 30.0% |
| ! | CTTCATTTCTTTGTCCTTTT+GGG | - | chr3_4:65786969-65786988 | Msa0514890:CDS | 30.0% |
| ! | TTCATTTCTTTGTCCTTTTG+GGG | - | chr3_4:65786970-65786989 | Msa0514890:CDS | 30.0% |
| ACATTCATATAAGGTCTCAA+AGG | + | chr3_4:65787279-65787298 | None:intergenic | 30.0% | |
| GTGATCAATTTAGTATCTAG+TGG | - | chr3_4:65787569-65787588 | Msa0514890:intron | 30.0% | |
| !!! | CGAGTTATTTATTTTTGCTC+TGG | - | chr3_4:65787672-65787691 | Msa0514890:intron | 30.0% |
| TATATCACGACATATGGTTT+AGG | + | chr3_4:65787713-65787732 | None:intergenic | 30.0% | |
| CTGTCAAATCTTTACAACAA+AGG | - | chr3_4:65787809-65787828 | Msa0514890:intron | 30.0% | |
| !!! | TAAATTTTGACTGTCGTTGA+AGG | + | chr3_4:65787847-65787866 | None:intergenic | 30.0% |
| TGAGTATATAACCTATGTAC+TGG | - | chr3_4:65787889-65787908 | Msa0514890:intron | 30.0% | |
| !!! | GTTTTCTGTTTTGTTGGTTT+AGG | - | chr3_4:65787986-65788005 | Msa0514890:intron | 30.0% |
| ATAGCATGAAAATTTGGGTA+AGG | + | chr3_4:65788067-65788086 | None:intergenic | 30.0% | |
| ! | GGGATCCTTATTTAATACTT+TGG | - | chr3_4:65788137-65788156 | Msa0514890:intron | 30.0% |
| ACAGAGAAAACAATGAAGAT+TGG | + | chr3_4:65788423-65788442 | None:intergenic | 30.0% | |
| !! | GACCAACTGGTTTAATATTT+TGG | - | chr3_4:65788522-65788541 | Msa0514890:intron | 30.0% |
| GTGAAACAATATTTGATCCT+TGG | + | chr3_4:65788747-65788766 | None:intergenic | 30.0% | |
| ! | TCCTCTTTTGATATTTTGTG+AGG | - | chr3_4:65788894-65788913 | Msa0514890:intron | 30.0% |
| ACCTCACAAAATATCAAAAG+AGG | + | chr3_4:65788898-65788917 | None:intergenic | 30.0% | |
| GCTCATACAAATTAATCTTG+TGG | + | chr3_4:65788932-65788951 | None:intergenic | 30.0% | |
| !!! | AAGTCATTTTAACTTACACC+TGG | - | chr3_4:65788968-65788987 | Msa0514890:intron | 30.0% |
| ACATGATTGCAATATTGCAT+AGG | - | chr3_4:65789299-65789318 | Msa0514890:intron | 30.0% | |
| TGTCTTGTCTTTCTCAAATA+AGG | - | chr3_4:65789462-65789481 | Msa0514890:CDS | 30.0% | |
| CTTTCTCAAATAAGGTTTCT+TGG | - | chr3_4:65789470-65789489 | Msa0514890:intron | 30.0% | |
| ATTCGAAAGACAGAAAAATG+AGG | + | chr3_4:65789536-65789555 | None:intergenic | 30.0% | |
| !! | TCTTTTGGAAATGCGTTTTA+AGG | - | chr3_4:65789621-65789640 | Msa0514890:intron | 30.0% |
| ! | TTAAGGAAACAAGTTGAGAA+AGG | - | chr3_4:65789638-65789657 | Msa0514890:intron | 30.0% |
| !! | TCGAACGGATTTTATAAGAA+TGG | + | chr3_4:65789750-65789769 | None:intergenic | 30.0% |
| AAACATCAACCCCTATTTAT+AGG | - | chr3_4:65789968-65789987 | Msa0514890:intron | 30.0% | |
| AACATCAACCCCTATTTATA+GGG | - | chr3_4:65789969-65789988 | Msa0514890:intron | 30.0% | |
| AATTTACTTAGGATTAGGAG+GGG | + | chr3_4:65790003-65790022 | None:intergenic | 30.0% | |
| CAATTTACTTAGGATTAGGA+GGG | + | chr3_4:65790004-65790023 | None:intergenic | 30.0% | |
| CCTAACTTTCCAATTTACTT+AGG | + | chr3_4:65790014-65790033 | None:intergenic | 30.0% | |
| CCTAAGTAAATTGGAAAGTT+AGG | - | chr3_4:65790011-65790030 | Msa0514890:intron | 30.0% | |
| TACACTTCTTTGTGATTAGA+TGG | - | chr3_4:65790334-65790353 | Msa0514890:intron | 30.0% | |
| ACACTTCTTTGTGATTAGAT+GGG | - | chr3_4:65790335-65790354 | Msa0514890:intron | 30.0% | |
| ! | AAATAAGCTTACTTCCCTTT+TGG | - | chr3_4:65790432-65790451 | Msa0514890:intron | 30.0% |
| ! | TTACCTTCATTTTCTTGTAC+AGG | - | chr3_4:65790756-65790775 | Msa0514890:intron | 30.0% |
| GAACAACAAACAAATATGAG+TGG | + | chr3_4:65790939-65790958 | None:intergenic | 30.0% | |
| TGAGGAAGTTGTATGATATA+GGG | + | chr3_4:65791035-65791054 | None:intergenic | 30.0% | |
| TTGAGGAAGTTGTATGATAT+AGG | + | chr3_4:65791036-65791055 | None:intergenic | 30.0% | |
| ! | TTTCCTTGTGCTTATCTTTT+TGG | - | chr3_4:65791212-65791231 | Msa0514890:intron | 30.0% |
| !! | ATTTTTGAAGAAAGCACACT+AGG | + | chr3_4:65791369-65791388 | None:intergenic | 30.0% |
| GGATTAAAAAAGTGAAGGAA+AGG | + | chr3_4:65791709-65791728 | None:intergenic | 30.0% | |
| ATCATAGATAAATTGTGCAC+TGG | + | chr3_4:65791730-65791749 | None:intergenic | 30.0% | |
| TAAACTTGTCCCCAAATAAA+GGG | + | chr3_4:65791784-65791803 | None:intergenic | 30.0% | |
| TTAAACTTGTCCCCAAATAA+AGG | + | chr3_4:65791785-65791804 | None:intergenic | 30.0% | |
| GTGTATGTAACCATAATAAG+CGG | + | chr3_4:65791818-65791837 | None:intergenic | 30.0% | |
| ! | TATTTTCAAAACTGAAGCAG+AGG | - | chr3_4:65791901-65791920 | Msa0514890:intron | 30.0% |
| TGTAAAATAATTAGTCCGGA+TGG | + | chr3_4:65791944-65791963 | None:intergenic | 30.0% | |
| TTGCAATACTTATGCTTGAT+TGG | - | chr3_4:65792055-65792074 | Msa0514890:intron | 30.0% | |
| !!! | GTTCTGTTTTATTTGTAGAG+CGG | - | chr3_4:65792077-65792096 | Msa0514890:intron | 30.0% |
| TAGACATTCCTTCACAAAAT+TGG | - | chr3_4:65792204-65792223 | Msa0514890:intron | 30.0% | |
| TTGGAAGTAATTTGACCTAA+TGG | - | chr3_4:65792223-65792242 | Msa0514890:intron | 30.0% | |
| ! | AGTAATTCTAGAAATTCAGC+TGG | - | chr3_4:65792557-65792576 | Msa0514890:intron | 30.0% |
| TAAGTAACTTGGTTCAAAGA+TGG | + | chr3_4:65792758-65792777 | None:intergenic | 30.0% | |
| CATCACTGTACAAGATAATT+TGG | + | chr3_4:65792890-65792909 | None:intergenic | 30.0% | |
| CAAATTATCTTGTACAGTGA+TGG | - | chr3_4:65792888-65792907 | Msa0514890:five_prime_UTR | 30.0% | |
| ! | TAGCCTATCTTTTCATCTTT+AGG | + | chr3_4:65792960-65792979 | None:intergenic | 30.0% |
| GAAAGAAAAACTACGCTATA+TGG | + | chr3_4:65793088-65793107 | None:intergenic | 30.0% | |
| AACTCGTAAAGGTTACTGAA+CGG | + | chr3_4:65783535-65783554 | None:intergenic | 35.0% | |
| !!! | ACAATAAGTGCTTTTTTCCC+CGG | - | chr3_4:65783623-65783642 | Msa0514890:three_prime_UTR | 35.0% |
| TATAGATCGAAATTGTGAGG+TGG | + | chr3_4:65783767-65783786 | None:intergenic | 35.0% | |
| ! | TTTTCACCGTTGGATATACT+TGG | - | chr3_4:65783935-65783954 | Msa0514890:CDS | 35.0% |
| ACAGAACCAAGTATATCCAA+CGG | + | chr3_4:65783944-65783963 | None:intergenic | 35.0% | |
| TATGATAGGATTGCGTATCA+TGG | - | chr3_4:65784118-65784137 | Msa0514890:CDS | 35.0% | |
| !! | AGATAGCATTTCTAGTGTCA+TGG | + | chr3_4:65784197-65784216 | None:intergenic | 35.0% |
| CACTAGAAATGCTATCTAGA+AGG | - | chr3_4:65784200-65784219 | Msa0514890:CDS | 35.0% | |
| !!! | TAAGGTTTTGGATGAAGATG+CGG | - | chr3_4:65784313-65784332 | Msa0514890:CDS | 35.0% |
| ATGGAGAAGTTGTGAATAGT+TGG | - | chr3_4:65784434-65784453 | Msa0514890:intron | 35.0% | |
| AGGGGAAAGATTTATAACGT+CGG | - | chr3_4:65784474-65784493 | Msa0514890:intron | 35.0% | |
| AATATGCTGCCTCCTTATAA+TGG | - | chr3_4:65784557-65784576 | Msa0514890:CDS | 35.0% | |
| AAGCTTGTGTCAAATAAGTC+AGG | - | chr3_4:65784614-65784633 | Msa0514890:intron | 35.0% | |
| ATAGCTTCTCACAATGAGAA+TGG | - | chr3_4:65784838-65784857 | Msa0514890:CDS | 35.0% | |
| !!! | GTATTTCTTTCTTTTGGAGC+TGG | - | chr3_4:65784863-65784882 | Msa0514890:CDS | 35.0% |
| ! | GGAGTACATTTTTGCTTACT+TGG | - | chr3_4:65784893-65784912 | Msa0514890:CDS | 35.0% |
| !! | ACTTTTACAGCCTTCTAGAA+AGG | - | chr3_4:65784955-65784974 | Msa0514890:intron | 35.0% |
| !! | GCTCAAATAACTCTGAAGTT+TGG | + | chr3_4:65785016-65785035 | None:intergenic | 35.0% |
| ! | TGAAGGTATGTTTGGGTTTA+GGG | + | chr3_4:65785069-65785088 | None:intergenic | 35.0% |
| ! | AGGATTCTGAAGGTATGTTT+GGG | + | chr3_4:65785076-65785095 | None:intergenic | 35.0% |
| ! | AAGGATTCTGAAGGTATGTT+TGG | + | chr3_4:65785077-65785096 | None:intergenic | 35.0% |
| ! | ATTCATTACTACTTCTGGAG+TGG | + | chr3_4:65785293-65785312 | None:intergenic | 35.0% |
| !!! | ATTCAAGGTTTTGAAGATGC+TGG | - | chr3_4:65785507-65785526 | Msa0514890:intron | 35.0% |
| !!! | TTCAAGGTTTTGAAGATGCT+GGG | - | chr3_4:65785508-65785527 | Msa0514890:intron | 35.0% |
| ! | CTTGGTCTTCTATCTAATTG+TGG | - | chr3_4:65785575-65785594 | Msa0514890:intron | 35.0% |
| TATCTAATTGTGGGATCCAT+TGG | - | chr3_4:65785585-65785604 | Msa0514890:intron | 35.0% | |
| TTCTTCTCATTATGATGCAC+AGG | - | chr3_4:65785622-65785641 | Msa0514890:CDS | 35.0% | |
| TTACAAAAAGTAAGGCTAGG+AGG | + | chr3_4:65785665-65785684 | None:intergenic | 35.0% | |
| CGATTACAAAAAGTAAGGCT+AGG | + | chr3_4:65785668-65785687 | None:intergenic | 35.0% | |
| CATACTTTGTTACGATACGA+GGG | - | chr3_4:65785834-65785853 | Msa0514890:CDS | 35.0% | |
| GATAAGAGGCTTAACACTAT+TGG | + | chr3_4:65785869-65785888 | None:intergenic | 35.0% | |
| GTTAAGCCTCTTATCAGAAA+TGG | - | chr3_4:65785874-65785893 | Msa0514890:CDS | 35.0% | |
| TTGGAAAGTAAGGCAAATTG+TGG | - | chr3_4:65785965-65785984 | Msa0514890:intron | 35.0% | |
| ! | AGGCAAATTGTGGTATTGAA+TGG | - | chr3_4:65785975-65785994 | Msa0514890:intron | 35.0% |
| ATTGAATTGATGCAAGGGAA+AGG | + | chr3_4:65786079-65786098 | None:intergenic | 35.0% | |
| CTCAATTAAGTGTGAGAACT+AGG | - | chr3_4:65786118-65786137 | Msa0514890:intron | 35.0% | |
| TTGACAAGTTAGCATGAAGT+AGG | - | chr3_4:65786287-65786306 | Msa0514890:intron | 35.0% | |
| ! | ATACTTTTGTAAGCAGGAGT+GGG | - | chr3_4:65786393-65786412 | Msa0514890:intron | 35.0% |
| !! | GTGAAATTCCTAAAAGCATC+TGG | - | chr3_4:65786495-65786514 | Msa0514890:intron | 35.0% |
| ! | TTTTGTGGGAAAGAACTTTC+TGG | + | chr3_4:65786544-65786563 | None:intergenic | 35.0% |
| ! | ACCACCTGTTCTTGTTTATA+TGG | - | chr3_4:65786770-65786789 | Msa0514890:intron | 35.0% |
| ACAAAGAAAATTAGAGAGGG+TGG | + | chr3_4:65786816-65786835 | None:intergenic | 35.0% | |
| CTGGACAAAGAAAATTAGAG+AGG | + | chr3_4:65786820-65786839 | None:intergenic | 35.0% | |
| AAAGCAATGATTTCCCCAAA+AGG | + | chr3_4:65786986-65787005 | None:intergenic | 35.0% | |
| AAAAACTACGTGTAGGTGTT+GGG | + | chr3_4:65787184-65787203 | None:intergenic | 35.0% | |
| TGACGATATGCTTACTCAAA+TGG | - | chr3_4:65787302-65787321 | Msa0514890:intron | 35.0% | |
| GCAATTAGGGGAAAATGATA+TGG | - | chr3_4:65787456-65787475 | Msa0514890:intron | 35.0% | |
| TGATACAGATGAGAAGTCAA+TGG | - | chr3_4:65787483-65787502 | Msa0514890:intron | 35.0% | |
| AGAAGTCAATGGCTAAACTA+AGG | - | chr3_4:65787494-65787513 | Msa0514890:intron | 35.0% | |
| TATCGTATCTTCCAACTCAA+GGG | + | chr3_4:65787918-65787937 | None:intergenic | 35.0% | |
| TTATCGTATCTTCCAACTCA+AGG | + | chr3_4:65787919-65787938 | None:intergenic | 35.0% | |
| ATGAAAATTTGGGTAAGGTG+GGG | + | chr3_4:65788062-65788081 | None:intergenic | 35.0% | |
| CATGAAAATTTGGGTAAGGT+GGG | + | chr3_4:65788063-65788082 | None:intergenic | 35.0% | |
| CTGTGAACTAATCAACAAAC+AGG | + | chr3_4:65788188-65788207 | None:intergenic | 35.0% | |
| GAATATTTCTTTGCTGCATC+TGG | - | chr3_4:65788207-65788226 | Msa0514890:intron | 35.0% | |
| ! | GAAGTCTAAGATCGGAAAAA+CGG | + | chr3_4:65788836-65788855 | None:intergenic | 35.0% |
| ! | AACTTGTCGAAGTCTAAGAT+CGG | + | chr3_4:65788844-65788863 | None:intergenic | 35.0% |
| ACAGAAGAGATAATGTTCAC+GGG | + | chr3_4:65789114-65789133 | None:intergenic | 35.0% | |
| CACAGAAGAGATAATGTTCA+CGG | + | chr3_4:65789115-65789134 | None:intergenic | 35.0% | |
| AATGCATGAGAAGTCAGATA+TGG | + | chr3_4:65789169-65789188 | None:intergenic | 35.0% | |
| TTCTCTCATATCAAAACCGA+AGG | + | chr3_4:65789343-65789362 | None:intergenic | 35.0% | |
| !! | GTTAGAGGCATTGAAATTGT+GGG | - | chr3_4:65789569-65789588 | Msa0514890:intron | 35.0% |
| ! | TGTTGCAATTCTTTTAGCAG+AGG | - | chr3_4:65789688-65789707 | Msa0514890:intron | 35.0% |
| AAAAGCGATAGATCAATGCT+AGG | + | chr3_4:65789725-65789744 | None:intergenic | 35.0% | |
| TATAAAATCCGTTCGAACAC+AGG | - | chr3_4:65789754-65789773 | Msa0514890:intron | 35.0% | |
| CCTTGTATCCCTATAAATAG+GGG | + | chr3_4:65789980-65789999 | None:intergenic | 35.0% | |
| GCCTTGTATCCCTATAAATA+GGG | + | chr3_4:65789981-65790000 | None:intergenic | 35.0% | |
| CCAATTTACTTAGGATTAGG+AGG | + | chr3_4:65790005-65790024 | None:intergenic | 35.0% | |
| CCTCCTAATCCTAAGTAAAT+TGG | - | chr3_4:65790002-65790021 | Msa0514890:intron | 35.0% | |
| GTAATGTGAATCATGTACTG+TGG | - | chr3_4:65790684-65790703 | Msa0514890:intron | 35.0% | |
| ATGCCTGTACAAGAAAATGA+AGG | + | chr3_4:65790762-65790781 | None:intergenic | 35.0% | |
| CATAAGTAAGTTAACTGAGC+TGG | + | chr3_4:65790881-65790900 | None:intergenic | 35.0% | |
| CAACAAACAAATATGAGTGG+TGG | + | chr3_4:65790936-65790955 | None:intergenic | 35.0% | |
| TGGTATTCATTTGACAGCAT+AGG | + | chr3_4:65790963-65790982 | None:intergenic | 35.0% | |
| !!! | TATCCTATTTTTTCCCAGGA+TGG | - | chr3_4:65790993-65791012 | Msa0514890:intron | 35.0% |
| AGGAAGTTGTATGATATAGG+GGG | + | chr3_4:65791033-65791052 | None:intergenic | 35.0% | |
| GAGGAAGTTGTATGATATAG+GGG | + | chr3_4:65791034-65791053 | None:intergenic | 35.0% | |
| TAGTTTCTTTATTAGGACCG+AGG | + | chr3_4:65791068-65791087 | None:intergenic | 35.0% | |
| TGACGAATCAAAAGAGTCAT+AGG | + | chr3_4:65791107-65791126 | None:intergenic | 35.0% | |
| TAATCCAACAAAACTGTCGA+CGG | - | chr3_4:65791156-65791175 | Msa0514890:CDS | 35.0% | |
| ATGCCAAAAAGATAAGCACA+AGG | + | chr3_4:65791218-65791237 | None:intergenic | 35.0% | |
| CTAAATCCCTCTTAATGGTT+TGG | + | chr3_4:65791266-65791285 | None:intergenic | 35.0% | |
| ! | CTCTAAAGGAGTAGAAAAGT+CGG | - | chr3_4:65791404-65791423 | Msa0514890:intron | 35.0% |
| GAAATAGTTGAGCGCATTAT+GGG | + | chr3_4:65791451-65791470 | None:intergenic | 35.0% | |
| AGAAATAGTTGAGCGCATTA+TGG | + | chr3_4:65791452-65791471 | None:intergenic | 35.0% | |
| AAAGGAGCAAAAATGTTCTG+GGG | + | chr3_4:65791691-65791710 | None:intergenic | 35.0% | |
| GAAAGGAGCAAAAATGTTCT+GGG | + | chr3_4:65791692-65791711 | None:intergenic | 35.0% | |
| GCACTGGATTAAAAAAGTGA+AGG | + | chr3_4:65791714-65791733 | None:intergenic | 35.0% | |
| TTATCTATGATTGCAGCGAA+TGG | - | chr3_4:65791739-65791758 | Msa0514890:intron | 35.0% | |
| TATCTATGATTGCAGCGAAT+GGG | - | chr3_4:65791740-65791759 | Msa0514890:intron | 35.0% | |
| ! | TATGGTTACATACACCGTTT+TGG | - | chr3_4:65791823-65791842 | Msa0514890:CDS | 35.0% |
| !! | TATTTAATTTTCTGGGGAGC+TGG | - | chr3_4:65791870-65791889 | Msa0514890:intron | 35.0% |
| !! | TTTTATTTGTAGAGCGGTCT+TGG | - | chr3_4:65792083-65792102 | Msa0514890:intron | 35.0% |
| ! | CAACGGACTTGATATTGAAT+CGG | - | chr3_4:65792162-65792181 | Msa0514890:intron | 35.0% |
| ! | AACGGACTTGATATTGAATC+GGG | - | chr3_4:65792163-65792182 | Msa0514890:intron | 35.0% |
| CTTAGACCTTGTATTTCTTC+AGG | - | chr3_4:65792313-65792332 | Msa0514890:intron | 35.0% | |
| ! | TGTCTCTTCATCCATAGTTT+TGG | + | chr3_4:65792405-65792424 | None:intergenic | 35.0% |
| AAACTATGGATGAAGAGACA+AGG | - | chr3_4:65792405-65792424 | Msa0514890:intron | 35.0% | |
| ! | AGAGTTTCAAGTCCAACATA+GGG | - | chr3_4:65792633-65792652 | Msa0514890:intron | 35.0% |
| ! | CCAAAAAGTTTTTACCCCTA+CGG | - | chr3_4:65792657-65792676 | Msa0514890:intron | 35.0% |
| TACAATGACGAGGATTAAGA+TGG | - | chr3_4:65792776-65792795 | Msa0514890:CDS | 35.0% | |
| CAATAACACTTTACACCTGT+AGG | + | chr3_4:65792851-65792870 | None:intergenic | 35.0% | |
| TTTCATCTTTAGGCTGCAAT+GGG | + | chr3_4:65792950-65792969 | None:intergenic | 35.0% | |
| ! | TTTTCATCTTTAGGCTGCAA+TGG | + | chr3_4:65792951-65792970 | None:intergenic | 35.0% |
| CAGCCTAAAGATGAAAAGAT+AGG | - | chr3_4:65792954-65792973 | Msa0514890:five_prime_UTR | 35.0% | |
| ACAAAGCTAAAGCAGCTATA+TGG | + | chr3_4:65793129-65793148 | None:intergenic | 35.0% | |
| ! | AAACAAAATTTTGCCTGGCT+TGG | - | chr3_4:65793170-65793189 | Msa0514890:five_prime_UTR | 35.0% |
| !! | CTCCAATTTTGACCTCTTCA+AGG | - | chr3_4:65783697-65783716 | Msa0514890:three_prime_UTR | 40.0% |
| TAATCGCGTTTGTGTGTGAA+AGG | - | chr3_4:65783804-65783823 | Msa0514890:three_prime_UTR | 40.0% | |
| AATCGCGTTTGTGTGTGAAA+GGG | - | chr3_4:65783805-65783824 | Msa0514890:three_prime_UTR | 40.0% | |
| AAAGGGAGAAAGAGAGATGT+GGG | - | chr3_4:65783822-65783841 | Msa0514890:three_prime_UTR | 40.0% | |
| TGGTGAGTTTGTCAGAATCA+CGG | + | chr3_4:65784177-65784196 | None:intergenic | 40.0% | |
| ! | CGGTGTTAAAGTCACTTATG+TGG | - | chr3_4:65784333-65784352 | Msa0514890:CDS | 40.0% |
| TTTAGGTCATTGGGTCATGA+GGG | + | chr3_4:65784392-65784411 | None:intergenic | 40.0% | |
| CAAGCCCCTTACAAAAGTTT+AGG | + | chr3_4:65784409-65784428 | None:intergenic | 40.0% | |
| GACGTTATAAATCTTTCCCC+TGG | + | chr3_4:65784475-65784494 | None:intergenic | 40.0% | |
| AAGCTGTCTGGTCCATTATA+AGG | + | chr3_4:65784572-65784591 | None:intergenic | 40.0% | |
| ! | TAAAAAGGCATGAAGCTGTC+TGG | + | chr3_4:65784584-65784603 | None:intergenic | 40.0% |
| !!! | TCTTTTGGAGCTGGTCATAT+TGG | - | chr3_4:65784872-65784891 | Msa0514890:CDS | 40.0% |
| AATTGGCATGCCTTTCTAGA+AGG | + | chr3_4:65784968-65784987 | None:intergenic | 40.0% | |
| AAACATGTGCAGCTCAGAAT+TGG | + | chr3_4:65784985-65785004 | None:intergenic | 40.0% | |
| ! | CTGAAGGTATGTTTGGGTTT+AGG | + | chr3_4:65785070-65785089 | None:intergenic | 40.0% |
| !!! | GAATCCTTGTTTTTAGTCGG+TGG | - | chr3_4:65785089-65785108 | Msa0514890:intron | 40.0% |
| !!! | TCAAGGTTTTGAAGATGCTG+GGG | - | chr3_4:65785509-65785528 | Msa0514890:intron | 40.0% |
| ACTTCCTACAGTATCCTCAA+TGG | - | chr3_4:65785774-65785793 | Msa0514890:intron | 40.0% | |
| GCATACTTTGTTACGATACG+AGG | - | chr3_4:65785833-65785852 | Msa0514890:CDS | 40.0% | |
| !! | TTTCCAACTCGAGGGTATTT+GGG | + | chr3_4:65785952-65785971 | None:intergenic | 40.0% |
| ! | GATACTTTTGTAAGCAGGAG+TGG | - | chr3_4:65786392-65786411 | Msa0514890:intron | 40.0% |
| AAGTCATGGCAAATCCCATA+AGG | + | chr3_4:65786421-65786440 | None:intergenic | 40.0% | |
| GTTACTGGTGCATTTCTTCT+TGG | - | chr3_4:65786461-65786480 | Msa0514890:intron | 40.0% | |
| ! | GCATTTCTCCAGATGCTTTT+AGG | + | chr3_4:65786506-65786525 | None:intergenic | 40.0% |
| TTCCCACAAAATTGCCCAAA+TGG | - | chr3_4:65786553-65786572 | Msa0514890:intron | 40.0% | |
| ! | AGCCATTTGGGCAATTTTGT+GGG | + | chr3_4:65786558-65786577 | None:intergenic | 40.0% |
| ATCCAGTTTGACAGCCATTT+GGG | + | chr3_4:65786570-65786589 | None:intergenic | 40.0% | |
| GCCATATAAACAAGAACAGG+TGG | + | chr3_4:65786774-65786793 | None:intergenic | 40.0% | |
| GAACTTGAAATGAAGCCAAC+TGG | + | chr3_4:65786839-65786858 | None:intergenic | 40.0% | |
| ! | GCTTTTGACCAGTGTATTGT+TGG | - | chr3_4:65787001-65787020 | Msa0514890:CDS | 40.0% |
| TTTGACCAGTGTATTGTTGG+CGG | - | chr3_4:65787004-65787023 | Msa0514890:CDS | 40.0% | |
| ! | TTTTACCGCCAACAATACAC+TGG | + | chr3_4:65787012-65787031 | None:intergenic | 40.0% |
| GCGGTAAAAGCAATGCAATT+TGG | - | chr3_4:65787023-65787042 | Msa0514890:CDS | 40.0% | |
| ! | AAAACTACGTGTAGGTGTTG+GGG | + | chr3_4:65787183-65787202 | None:intergenic | 40.0% |
| CAAAAACTACGTGTAGGTGT+TGG | + | chr3_4:65787185-65787204 | None:intergenic | 40.0% | |
| ! | CAACACCTACACGTAGTTTT+TGG | - | chr3_4:65787183-65787202 | Msa0514890:intron | 40.0% |
| AAGCTCCAAAAACTACGTGT+AGG | + | chr3_4:65787191-65787210 | None:intergenic | 40.0% | |
| GATCCTTCATTCAAACCACA+AGG | - | chr3_4:65787430-65787449 | Msa0514890:intron | 40.0% | |
| ! | CTAAACTAAGGCGTCATCTT+CGG | - | chr3_4:65787506-65787525 | Msa0514890:intron | 40.0% |
| CTGTCGTTGAAGGAAATCTA+TGG | + | chr3_4:65787837-65787856 | None:intergenic | 40.0% | |
| TGAAAATTTGGGTAAGGTGG+GGG | + | chr3_4:65788061-65788080 | None:intergenic | 40.0% | |
| GCATGAAAATTTGGGTAAGG+TGG | + | chr3_4:65788064-65788083 | None:intergenic | 40.0% | |
| ATTCAAGCATCAGACCTGTT+CGG | - | chr3_4:65788103-65788122 | Msa0514890:intron | 40.0% | |
| TTACACCAAATCTGCACTGT+CGG | - | chr3_4:65788311-65788330 | Msa0514890:intron | 40.0% | |
| GTCGGAACTAATTGATCCTA+AGG | - | chr3_4:65788329-65788348 | Msa0514890:intron | 40.0% | |
| ! | AGGGGGAGTGTAAAATTGAT+AGG | + | chr3_4:65788795-65788814 | None:intergenic | 40.0% |
| TTGTATGAGCGGTTGAGATT+TGG | - | chr3_4:65788942-65788961 | Msa0514890:intron | 40.0% | |
| TATATATGAGTCAGGATCCG+TGG | + | chr3_4:65788997-65789016 | None:intergenic | 40.0% | |
| TCTCATATCAAAACCGAAGG+AGG | + | chr3_4:65789340-65789359 | None:intergenic | 40.0% | |
| !! | GGTTAGAGGCATTGAAATTG+TGG | - | chr3_4:65789568-65789587 | Msa0514890:intron | 40.0% |
| ! | GAAACAAGTTGAGAAAGGCA+TGG | - | chr3_4:65789643-65789662 | Msa0514890:intron | 40.0% |
| !! | AAAGGCATGGCTGTTTTACT+TGG | - | chr3_4:65789656-65789675 | Msa0514890:intron | 40.0% |
| CCCCTATTTATAGGGATACA+AGG | - | chr3_4:65789977-65789996 | Msa0514890:intron | 40.0% | |
| ! | GGCCTTGTATCCCTATAAAT+AGG | + | chr3_4:65789982-65790001 | None:intergenic | 40.0% |
| !!! | TGCTTATATTTTGGGACGGA+TGG | + | chr3_4:65790309-65790328 | None:intergenic | 40.0% |
| !!! | TTGCTTATATTTTGGGACGG+AGG | - | chr3_4:65790308-65790327 | Msa0514890:intron | 40.0% |
| !!! | TGCTTATATTTTGGGACGGA+GGG | - | chr3_4:65790309-65790328 | Msa0514890:intron | 40.0% |
| !!! | GATGGGCTTTGTTAGTGTTT+TGG | - | chr3_4:65790352-65790371 | Msa0514890:intron | 40.0% |
| !!! | CTTACTTCCCTTTTGGCTTA+GGG | - | chr3_4:65790439-65790458 | Msa0514890:intron | 40.0% |
| TGTACATCCCTAAGCCAAAA+GGG | + | chr3_4:65790449-65790468 | None:intergenic | 40.0% | |
| ATGTACATCCCTAAGCCAAA+AGG | + | chr3_4:65790450-65790469 | None:intergenic | 40.0% | |
| CAGATGCACATGTACATTAG+TGG | + | chr3_4:65790796-65790815 | None:intergenic | 40.0% | |
| !! | TTAACTGAGCTGGTTTGTCT+GGG | + | chr3_4:65790871-65790890 | None:intergenic | 40.0% |
| CAACCATCCTGGGAAAAAAT+AGG | + | chr3_4:65790999-65791018 | None:intergenic | 40.0% | |
| ! | ATGATATAGGGGGTGCATAA+CGG | + | chr3_4:65791023-65791042 | None:intergenic | 40.0% |
| TCACAGCAGACAGTAATACA+TGG | + | chr3_4:65791190-65791209 | None:intergenic | 40.0% | |
| GTTTGGCACAACTTCTCTAA+AGG | - | chr3_4:65791390-65791409 | Msa0514890:intron | 40.0% | |
| TAGAAAAGTCGGCAATAAGC+TGG | - | chr3_4:65791415-65791434 | Msa0514890:intron | 40.0% | |
| AGAAAAGTCGGCAATAAGCT+GGG | - | chr3_4:65791416-65791435 | Msa0514890:intron | 40.0% | |
| GGAAAGGAGCAAAAATGTTC+TGG | + | chr3_4:65791693-65791712 | None:intergenic | 40.0% | |
| ATCTATGATTGCAGCGAATG+GGG | - | chr3_4:65791741-65791760 | Msa0514890:intron | 40.0% | |
| GAAGTTGCTTGCAACCAAAA+CGG | + | chr3_4:65791840-65791859 | None:intergenic | 40.0% | |
| CAAAACTGAAGCAGAGGATA+TGG | - | chr3_4:65791907-65791926 | Msa0514890:intron | 40.0% | |
| CCACTTGCAAGGAATTTCAA+CGG | - | chr3_4:65792145-65792164 | Msa0514890:intron | 40.0% | |
| TGAATCGGGTAACAACTATG+TGG | - | chr3_4:65792177-65792196 | Msa0514890:intron | 40.0% | |
| CTGCAGCTAAAGAATCCATT+AGG | + | chr3_4:65792241-65792260 | None:intergenic | 40.0% | |
| TAGCTGCAGTGTATGACATT+TGG | - | chr3_4:65792252-65792271 | Msa0514890:intron | 40.0% | |
| ACCTTGTATTTCTTCAGGAG+AGG | - | chr3_4:65792318-65792337 | Msa0514890:intron | 40.0% | |
| TCCTCTCCTGAAGAAATACA+AGG | + | chr3_4:65792322-65792341 | None:intergenic | 40.0% | |
| GTATTTCTTCAGGAGAGGAA+CGG | - | chr3_4:65792323-65792342 | Msa0514890:intron | 40.0% | |
| ATTACTGAAGAAGTGAACGG+AGG | - | chr3_4:65792374-65792393 | Msa0514890:intron | 40.0% | |
| ! | CGGAGGTATATCCAAAACTA+TGG | - | chr3_4:65792391-65792410 | Msa0514890:intron | 40.0% |
| GATGAAGAGACAAGGAGATA+TGG | - | chr3_4:65792413-65792432 | Msa0514890:intron | 40.0% | |
| TTCATCAAGCGCAGAATAAG+AGG | + | chr3_4:65792531-65792550 | None:intergenic | 40.0% | |
| TCTTATTCTGCGCTTGATGA+AGG | - | chr3_4:65792530-65792549 | Msa0514890:intron | 40.0% | |
| ACATGGCAAACAATGAAGAC+AGG | - | chr3_4:65792605-65792624 | Msa0514890:intron | 40.0% | |
| ! | CAGAGTTTCAAGTCCAACAT+AGG | - | chr3_4:65792632-65792651 | Msa0514890:intron | 40.0% |
| ! | GAGTTTCAAGTCCAACATAG+GGG | - | chr3_4:65792634-65792653 | Msa0514890:intron | 40.0% |
| !! | AAACTTTTTGGCCCCTATGT+TGG | + | chr3_4:65792648-65792667 | None:intergenic | 40.0% |
| ! | CCGTAGGGGTAAAAACTTTT+TGG | + | chr3_4:65792660-65792679 | None:intergenic | 40.0% |
| ! | ATTTTCCTGTGTTTGCCGTA+GGG | + | chr3_4:65792675-65792694 | None:intergenic | 40.0% |
| ! | TATTTTCCTGTGTTTGCCGT+AGG | + | chr3_4:65792676-65792695 | None:intergenic | 40.0% |
| ACGGCAAACACAGGAAAATA+CGG | - | chr3_4:65792676-65792695 | Msa0514890:intron | 40.0% | |
| CCTCGTCATTGTAAGTAACT+TGG | + | chr3_4:65792769-65792788 | None:intergenic | 40.0% | |
| CCAAGTTACTTACAATGACG+AGG | - | chr3_4:65792766-65792785 | Msa0514890:CDS | 40.0% | |
| TCAAAAAGGACTACAAGCAC+CGG | + | chr3_4:65792805-65792824 | None:intergenic | 40.0% | |
| CGCCTTGAAGAGGTCAAAAT+TGG | + | chr3_4:65783702-65783721 | None:intergenic | 45.0% | |
| GAAAGGGAGAAAGAGAGATG+TGG | - | chr3_4:65783821-65783840 | Msa0514890:three_prime_UTR | 45.0% | |
| TTGTTAGAGGAAGCGAGATC+AGG | + | chr3_4:65783855-65783874 | None:intergenic | 45.0% | |
| GATCTCGCTTCCTCTAACAA+CGG | - | chr3_4:65783855-65783874 | Msa0514890:three_prime_UTR | 45.0% | |
| ATCTCGCTTCCTCTAACAAC+GGG | - | chr3_4:65783856-65783875 | Msa0514890:three_prime_UTR | 45.0% | |
| ! | GAATGGTGCTTTTCACGTTG+AGG | - | chr3_4:65783878-65783897 | Msa0514890:three_prime_UTR | 45.0% |
| AGCACGTATCTAGGAACATC+TGG | + | chr3_4:65783916-65783935 | None:intergenic | 45.0% | |
| ! | ACGGTGAAAAGCACGTATCT+AGG | + | chr3_4:65783925-65783944 | None:intergenic | 45.0% |
| ! | AGATACGTGCTTTTCACCGT+TGG | - | chr3_4:65783925-65783944 | Msa0514890:exon | 45.0% |
| AGCAGGGACGAGAATGATAA+TGG | + | chr3_4:65783974-65783993 | None:intergenic | 45.0% | |
| TTCTCGTCCCTGCTGATATT+TGG | - | chr3_4:65783980-65783999 | Msa0514890:CDS | 45.0% | |
| TCTCGTCCCTGCTGATATTT+GGG | - | chr3_4:65783981-65784000 | Msa0514890:CDS | 45.0% | |
| TGAGTTTGTCAGAATCACGG+TGG | + | chr3_4:65784174-65784193 | None:intergenic | 45.0% | |
| ! | TGGTTGCTATTGACCCAATG+CGG | - | chr3_4:65784353-65784372 | Msa0514890:CDS | 45.0% |
| GTTTAGGTCATTGGGTCATG+AGG | + | chr3_4:65784393-65784412 | None:intergenic | 45.0% | |
| TTGTAAGGGGCTTGTGTACA+TGG | - | chr3_4:65784415-65784434 | Msa0514890:intron | 45.0% | |
| CTGTCTGGTCCATTATAAGG+AGG | + | chr3_4:65784569-65784588 | None:intergenic | 45.0% | |
| GCTTCTCACAATGAGAATGG+AGG | - | chr3_4:65784841-65784860 | Msa0514890:CDS | 45.0% | |
| !! | TGTTTGGGTTTAGGGCATTG+AGG | + | chr3_4:65785061-65785080 | None:intergenic | 45.0% |
| ! | CAGTCCACCGACTAAAAACA+AGG | + | chr3_4:65785096-65785115 | None:intergenic | 45.0% |
| ! | TATTTTCCTAAGCAGGGCTG+TGG | - | chr3_4:65785476-65785495 | Msa0514890:intron | 45.0% |
| GACTAGTGTGCACGTTAACT+TGG | - | chr3_4:65785557-65785576 | Msa0514890:intron | 45.0% | |
| !!! | GTGGGATCCATTGGTCTTTT+CGG | - | chr3_4:65785594-65785613 | Msa0514890:intron | 45.0% |
| TCATTATGATGCACAGGACC+TGG | - | chr3_4:65785628-65785647 | Msa0514890:CDS | 45.0% | |
| TAGGAGGATGAGAACAAACC+AGG | + | chr3_4:65785649-65785668 | None:intergenic | 45.0% | |
| ! | TGTGCCATTGAGGATACTGT+AGG | + | chr3_4:65785781-65785800 | None:intergenic | 45.0% |
| !! | TTCCAACTCGAGGGTATTTG+GGG | + | chr3_4:65785951-65785970 | None:intergenic | 45.0% |
| !! | CTTTCCAACTCGAGGGTATT+TGG | + | chr3_4:65785953-65785972 | None:intergenic | 45.0% |
| !! | TACCCTCGAGTTGGAAAGTA+AGG | - | chr3_4:65785955-65785974 | Msa0514890:intron | 45.0% |
| TGCCTTACTTTCCAACTCGA+GGG | + | chr3_4:65785960-65785979 | None:intergenic | 45.0% | |
| TTGCCTTACTTTCCAACTCG+AGG | + | chr3_4:65785961-65785980 | None:intergenic | 45.0% | |
| AAGTGTGAGAACTAGGCTCA+TGG | - | chr3_4:65786125-65786144 | Msa0514890:intron | 45.0% | |
| AGTGTGAGAACTAGGCTCAT+GGG | - | chr3_4:65786126-65786145 | Msa0514890:intron | 45.0% | |
| GGTGCATTTCTTCTTGGCTT+TGG | - | chr3_4:65786467-65786486 | Msa0514890:intron | 45.0% | |
| GCATCTGGAGAAATGCTGAT+TGG | - | chr3_4:65786510-65786529 | Msa0514890:intron | 45.0% | |
| TGTGGGAAAGAACTTTCTGG+CGG | + | chr3_4:65786541-65786560 | None:intergenic | 45.0% | |
| ! | CAGCCATTTGGGCAATTTTG+TGG | + | chr3_4:65786559-65786578 | None:intergenic | 45.0% |
| CATCCAGTTTGACAGCCATT+TGG | + | chr3_4:65786571-65786590 | None:intergenic | 45.0% | |
| CAAATGTCACTCACTGACAC+TGG | + | chr3_4:65786933-65786952 | None:intergenic | 45.0% | |
| !! | AAACTACGTGTAGGTGTTGG+GGG | + | chr3_4:65787182-65787201 | None:intergenic | 45.0% |
| CATCTGCTTGGAAGTTGCTT+GGG | + | chr3_4:65787244-65787263 | None:intergenic | 45.0% | |
| ACATCTGCTTGGAAGTTGCT+TGG | + | chr3_4:65787245-65787264 | None:intergenic | 45.0% | |
| CCTTCATTCAAACCACAAGG+CGG | - | chr3_4:65787433-65787452 | Msa0514890:intron | 45.0% | |
| CTTCATTCAAACCACAAGGC+GGG | - | chr3_4:65787434-65787453 | Msa0514890:intron | 45.0% | |
| !! | CAAACCATCCAGTTGACTTG+CGG | + | chr3_4:65787955-65787974 | None:intergenic | 45.0% |
| GCACTTACACCTAGTGTCAA+CGG | + | chr3_4:65788285-65788304 | None:intergenic | 45.0% | |
| TAGTTCCGACAGTGCAGATT+TGG | + | chr3_4:65788319-65788338 | None:intergenic | 45.0% | |
| GTTGGGATATTACGAGCCTT+AGG | + | chr3_4:65788348-65788367 | None:intergenic | 45.0% | |
| CTCTGTTCACCTTTCTTCTC+CGG | - | chr3_4:65788437-65788456 | Msa0514890:intron | 45.0% | |
| !! | AAAACAACGAAAGTGCCGAC+CGG | + | chr3_4:65788459-65788478 | None:intergenic | 45.0% |
| ACATTAATCTGGGGACCAAC+TGG | - | chr3_4:65788509-65788528 | Msa0514890:intron | 45.0% | |
| CTTCGACAAGTTCAAGAAGC+AGG | - | chr3_4:65788852-65788871 | Msa0514890:intron | 45.0% | |
| TAACTTACACCTGGTGTCCA+CGG | - | chr3_4:65788977-65788996 | Msa0514890:intron | 45.0% | |
| AAGTAGCTCCTGTGTTCGAA+CGG | + | chr3_4:65789765-65789784 | None:intergenic | 45.0% | |
| ACGGATGGAGTATATCGGAT+AGG | + | chr3_4:65790199-65790218 | None:intergenic | 45.0% | |
| TTGGGACGGATGGAGTATAT+CGG | + | chr3_4:65790204-65790223 | None:intergenic | 45.0% | |
| !!! | GCTTACTTCCCTTTTGGCTT+AGG | - | chr3_4:65790438-65790457 | Msa0514890:intron | 45.0% |
| !! | GTTAACTGAGCTGGTTTGTC+TGG | + | chr3_4:65790872-65790891 | None:intergenic | 45.0% |
| ! | TGATATAGGGGGTGCATAAC+GGG | + | chr3_4:65791022-65791041 | None:intergenic | 45.0% |
| TTCCTCAATCTCATTCGCCT+CGG | - | chr3_4:65791048-65791067 | Msa0514890:intron | 45.0% | |
| !! | ACATCCGTCGACAGTTTTGT+TGG | + | chr3_4:65791163-65791182 | None:intergenic | 45.0% |
| ! | TGAAGAAAGCACACTAGGCA+AGG | + | chr3_4:65791364-65791383 | None:intergenic | 45.0% |
| ! | ACAACGCCGTCCCTTTATTT+GGG | - | chr3_4:65791771-65791790 | Msa0514890:intron | 45.0% |
| CTTGTCCCCAAATAAAGGGA+CGG | + | chr3_4:65791780-65791799 | None:intergenic | 45.0% | |
| ACTGAAGCAGAGGATATGGA+TGG | - | chr3_4:65791911-65791930 | Msa0514890:intron | 45.0% | |
| AGCAGAGGATATGGATGGTT+TGG | - | chr3_4:65791916-65791935 | Msa0514890:intron | 45.0% | |
| ! | ATGGATGGTTTGGATCCATC+CGG | - | chr3_4:65791926-65791945 | Msa0514890:intron | 45.0% |
| ! | CTTGAACAAGGGCGCAAAAT+CGG | - | chr3_4:65792106-65792125 | Msa0514890:intron | 45.0% |
| ! | TTGAACAAGGGCGCAAAATC+GGG | - | chr3_4:65792107-65792126 | Msa0514890:intron | 45.0% |
| CCGTTGAAATTCCTTGCAAG+TGG | + | chr3_4:65792148-65792167 | None:intergenic | 45.0% | |
| AGCAAGTACGCTGCAATTAG+AGG | - | chr3_4:65792458-65792477 | Msa0514890:intron | 45.0% | |
| GCAAGTACGCTGCAATTAGA+GGG | - | chr3_4:65792459-65792478 | Msa0514890:intron | 45.0% | |
| ! | TTTTCCTGTGTTTGCCGTAG+GGG | + | chr3_4:65792674-65792693 | None:intergenic | 45.0% |
| AGGAAAATACGGTCTCTCGT+GGG | - | chr3_4:65792687-65792706 | Msa0514890:intron | 45.0% | |
| ACGAGGATTAAGATGGAAGC+CGG | - | chr3_4:65792783-65792802 | Msa0514890:CDS | 45.0% | |
| ATCATTTGGCAAGAGCCTAC+AGG | - | chr3_4:65792833-65792852 | Msa0514890:CDS | 45.0% | |
| !! | AAGAAAAATAATATTTAAAA+TGG | + | chr3_4:65791133-65791152 | None:intergenic | 5.0% |
| TTTCCCCGGAAACCAAAACG+CGG | - | chr3_4:65783637-65783656 | Msa0514890:three_prime_UTR | 50.0% | |
| !!! | AGTTTGTTGCCACCGCGTTT+TGG | + | chr3_4:65783652-65783671 | None:intergenic | 50.0% |
| GCTTCCTCTAACAACGGGAA+TGG | - | chr3_4:65783861-65783880 | Msa0514890:three_prime_UTR | 50.0% | |
| AGCACCATTCCCGTTGTTAG+AGG | + | chr3_4:65783868-65783887 | None:intergenic | 50.0% | |
| ! | TTCACGTTGAGGTACTTCGC+TGG | - | chr3_4:65783889-65783908 | Msa0514890:three_prime_UTR | 50.0% |
| GTACCGCCCAAATATCAGCA+GGG | + | chr3_4:65783990-65784009 | None:intergenic | 50.0% | |
| AGTACCGCCCAAATATCAGC+AGG | + | chr3_4:65783991-65784010 | None:intergenic | 50.0% | |
| !! | TCCAACTCGAGGGTATTTGG+GGG | + | chr3_4:65785950-65785969 | None:intergenic | 50.0% |
| ! | GTGGGAAAGAACTTTCTGGC+GGG | + | chr3_4:65786540-65786559 | None:intergenic | 50.0% |
| TGCCCAAATGGCTGTCAAAC+TGG | - | chr3_4:65786565-65786584 | Msa0514890:intron | 50.0% | |
| !! | AACTACGTGTAGGTGTTGGG+GGG | + | chr3_4:65787181-65787200 | None:intergenic | 50.0% |
| CTTCCAAGCAGATGTCCAAG+CGG | - | chr3_4:65787250-65787269 | Msa0514890:intron | 50.0% | |
| TTCCAAGCAGATGTCCAAGC+GGG | - | chr3_4:65787251-65787270 | Msa0514890:intron | 50.0% | |
| CCGCCTTGTGGTTTGAATGA+AGG | + | chr3_4:65787436-65787455 | None:intergenic | 50.0% | |
| AAACCACAAGGCGGGCAATT+AGG | - | chr3_4:65787442-65787461 | Msa0514890:intron | 50.0% | |
| AACCACAAGGCGGGCAATTA+GGG | - | chr3_4:65787443-65787462 | Msa0514890:intron | 50.0% | |
| TCATCTTCGGAATGCTCGTG+AGG | - | chr3_4:65787519-65787538 | Msa0514890:intron | 50.0% | |
| CTCAAGGGCTTCCAGTACAT+AGG | + | chr3_4:65787903-65787922 | None:intergenic | 50.0% | |
| TGTACTGGAAGCCCTTGAGT+TGG | - | chr3_4:65787904-65787923 | Msa0514890:intron | 50.0% | |
| TATGAACGCCGCAAGTCAAC+TGG | - | chr3_4:65787944-65787963 | Msa0514890:intron | 50.0% | |
| AGTCAGGATCCGTTGACACT+AGG | - | chr3_4:65788273-65788292 | Msa0514890:intron | 50.0% | |
| GTTCACCTTTCTTCTCCGGT+CGG | - | chr3_4:65788441-65788460 | Msa0514890:intron | 50.0% | |
| AACACAGGAGCTACTTGTGC+AGG | - | chr3_4:65789769-65789788 | Msa0514890:intron | 50.0% | |
| ! | GAAAGCACACTAGGCAAGGT+TGG | + | chr3_4:65791360-65791379 | None:intergenic | 50.0% |
| !! | GAGCGCATTATGGGAGTGTT+TGG | + | chr3_4:65791442-65791461 | None:intergenic | 50.0% |
| GACAACGCCGTCCCTTTATT+TGG | - | chr3_4:65791770-65791789 | Msa0514890:intron | 50.0% | |
| ! | CAACGCCGTCCCTTTATTTG+GGG | - | chr3_4:65791772-65791791 | Msa0514890:intron | 50.0% |
| ! | AGCGGTCTTGGCTTGAACAA+GGG | - | chr3_4:65792095-65792114 | Msa0514890:intron | 50.0% |
| ! | TGAACAAGGGCGCAAAATCG+GGG | - | chr3_4:65792108-65792127 | Msa0514890:intron | 50.0% |
| AGCAGGTTGTTCCACTTGCA+AGG | - | chr3_4:65792134-65792153 | Msa0514890:intron | 50.0% | |
| ! | TGCAGCGTACTTGCTGCTTA+TGG | + | chr3_4:65792453-65792472 | None:intergenic | 50.0% |
| TACGCTGCAATTAGAGGGCA+GGG | - | chr3_4:65792464-65792483 | Msa0514890:intron | 50.0% | |
| ! | TTCAGCTGGAGCACCATCTT+CGG | - | chr3_4:65792571-65792590 | Msa0514890:intron | 50.0% |
| TTTACCCCTACGGCAAACAC+AGG | - | chr3_4:65792667-65792686 | Msa0514890:intron | 50.0% | |
| CAGGAAAATACGGTCTCTCG+TGG | - | chr3_4:65792686-65792705 | Msa0514890:intron | 50.0% | |
| CTCATCAAGTGACTCAGACG+AGG | + | chr3_4:65792714-65792733 | None:intergenic | 50.0% | |
| !! | TGACCTTTCCGCTGACTCTA+TGG | - | chr3_4:65793052-65793071 | Msa0514890:five_prime_UTR | 50.0% |
| !! | GACCTTTCCGCTGACTCTAT+GGG | - | chr3_4:65793053-65793072 | Msa0514890:five_prime_UTR | 50.0% |
| TTCCCATAGAGTCAGCGGAA+AGG | + | chr3_4:65793058-65793077 | None:intergenic | 50.0% | |
| CCATGTTCCCATAGAGTCAG+CGG | + | chr3_4:65793063-65793082 | None:intergenic | 50.0% | |
| !!! | TGCCACCGCGTTTTGGTTTC+CGG | + | chr3_4:65783645-65783664 | None:intergenic | 55.0% |
| CGTCCCTGCTGATATTTGGG+CGG | - | chr3_4:65783984-65784003 | Msa0514890:CDS | 55.0% | |
| AGCCTGACGATCACCGCATT+GGG | + | chr3_4:65784369-65784388 | None:intergenic | 55.0% | |
| GCTGTGGCACCCCTTATTCA+AGG | - | chr3_4:65785492-65785511 | Msa0514890:intron | 55.0% | |
| ! | TGTCTGCACGTGTGCCATTG+AGG | + | chr3_4:65785791-65785810 | None:intergenic | 55.0% |
| TCCCCCAAATACCCTCGAGT+TGG | - | chr3_4:65785946-65785965 | Msa0514890:intron | 55.0% | |
| AAGCAGGAGTGGGAGCCTTA+TGG | - | chr3_4:65786403-65786422 | Msa0514890:intron | 55.0% | |
| ! | AGCAGGAGTGGGAGCCTTAT+GGG | - | chr3_4:65786404-65786423 | Msa0514890:intron | 55.0% |
| ATCCCGCTTGGACATCTGCT+TGG | + | chr3_4:65787256-65787275 | None:intergenic | 55.0% | |
| AGGTCTCAAAGGATCCCGCT+TGG | + | chr3_4:65787268-65787287 | None:intergenic | 55.0% | |
| ACCACAAGGCGGGCAATTAG+GGG | - | chr3_4:65787444-65787463 | Msa0514890:intron | 55.0% | |
| AACGCCGCAAGTCAACTGGA+TGG | - | chr3_4:65787948-65787967 | Msa0514890:intron | 55.0% | |
| AGCATCAGACCTGTTCGGAC+TGG | - | chr3_4:65788108-65788127 | Msa0514890:intron | 55.0% | |
| !! | ACCTGTTCGGACTGGCAAGT+TGG | - | chr3_4:65788116-65788135 | Msa0514890:intron | 55.0% |
| !! | CCTGTTCGGACTGGCAAGTT+GGG | - | chr3_4:65788117-65788136 | Msa0514890:intron | 55.0% |
| !! | AAGTGCCGACCGGAGAAGAA+AGG | + | chr3_4:65788449-65788468 | None:intergenic | 55.0% |
| !! | GCATAACGGGCAACCATCCT+GGG | + | chr3_4:65791009-65791028 | None:intergenic | 55.0% |
| !! | TGCATAACGGGCAACCATCC+TGG | + | chr3_4:65791010-65791029 | None:intergenic | 55.0% |
| GACCGAGGCGAATGAGATTG+AGG | + | chr3_4:65791053-65791072 | None:intergenic | 55.0% | |
| ! | GAGCGGTCTTGGCTTGAACA+AGG | - | chr3_4:65792094-65792113 | Msa0514890:intron | 55.0% |
| GTACGCTGCAATTAGAGGGC+AGG | - | chr3_4:65792463-65792482 | Msa0514890:intron | 55.0% | |
| CTGCAATTAGAGGGCAGGGT+GGG | - | chr3_4:65792468-65792487 | Msa0514890:intron | 55.0% | |
| ! | TCAGCTGGAGCACCATCTTC+GGG | - | chr3_4:65792572-65792591 | Msa0514890:intron | 55.0% |
| ! | TGGAGCACCATCTTCGGGTT+TGG | - | chr3_4:65792577-65792596 | Msa0514890:intron | 55.0% |
| GTCGAAGCCAAACCCGAAGA+TGG | + | chr3_4:65792587-65792606 | None:intergenic | 55.0% | |
| ! | CTTCGGGTTTGGCTTCGACA+TGG | - | chr3_4:65792588-65792607 | Msa0514890:intron | 55.0% |
| !! | CCGCTGACTCTATGGGAACA+TGG | - | chr3_4:65793060-65793079 | Msa0514890:five_prime_UTR | 55.0% |
| !!! | CCACCGCGTTTTGGTTTCCG+GGG | + | chr3_4:65783643-65783662 | None:intergenic | 60.0% |
| !!! | GCCACCGCGTTTTGGTTTCC+GGG | + | chr3_4:65783644-65783663 | None:intergenic | 60.0% |
| GACCCAATGCGGTGATCGTC+AGG | - | chr3_4:65784364-65784383 | Msa0514890:CDS | 60.0% | |
| GAGCCTGACGATCACCGCAT+TGG | + | chr3_4:65784370-65784389 | None:intergenic | 60.0% | |
| TCCCCTAATTGCCCGCCTTG+TGG | + | chr3_4:65787448-65787467 | None:intergenic | 60.0% | |
| CCCAACTTGCCAGTCCGAAC+AGG | + | chr3_4:65788120-65788139 | None:intergenic | 60.0% | |
| CACCATCATCTGCTGCGAGG+GGG | + | chr3_4:65788812-65788831 | None:intergenic | 60.0% | |
| CCACCATCATCTGCTGCGAG+GGG | + | chr3_4:65788813-65788832 | None:intergenic | 60.0% | |
| GCCACCATCATCTGCTGCGA+GGG | + | chr3_4:65788814-65788833 | None:intergenic | 60.0% | |
| AGTCAGGATCCGTGGACACC+AGG | + | chr3_4:65788989-65789008 | None:intergenic | 60.0% | |
| GCGCAAAATCGGGGAAGAGC+AGG | - | chr3_4:65792117-65792136 | Msa0514890:intron | 60.0% | |
| GCTGCAATTAGAGGGCAGGG+TGG | - | chr3_4:65792467-65792486 | Msa0514890:intron | 60.0% | |
| CCCCGGAAACCAAAACGCGG+TGG | - | chr3_4:65783640-65783659 | Msa0514890:three_prime_UTR | 65.0% | |
| CCTCTTGGCGCGCCTTGAAG+AGG | + | chr3_4:65783712-65783731 | None:intergenic | 65.0% | |
| CCTCTTCAAGGCGCGCCAAG+AGG | - | chr3_4:65783709-65783728 | Msa0514890:three_prime_UTR | 65.0% | |
| CTTCAAGGCGCGCCAAGAGG+TGG | - | chr3_4:65783712-65783731 | Msa0514890:three_prime_UTR | 65.0% | |
| CTCGCATCAGCGCCACCTCT+TGG | + | chr3_4:65783727-65783746 | None:intergenic | 65.0% | |
| !! | ACGTGTAGGTGTTGGGGGGC+AGG | + | chr3_4:65787177-65787196 | None:intergenic | 65.0% |
| CTCCCCCTCGCAGCAGATGA+TGG | - | chr3_4:65788807-65788826 | Msa0514890:CDS | 65.0% | |
| ! | CCCCTCGCAGCAGATGATGG+TGG | - | chr3_4:65788810-65788829 | Msa0514890:CDS | 65.0% |
| GGCCACCATCATCTGCTGCG+AGG | + | chr3_4:65788815-65788834 | None:intergenic | 65.0% | |
| ! | GGGGTGCCACAGCCCTGCTT+AGG | + | chr3_4:65785485-65785504 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 65783522 | 65793198 | 65783522 | ID=Msa0514890;Name=Msa0514890 |
| chr3_4 | mRNA | 65783522 | 65793198 | 65783522 | ID=Msa0514890-mRNA-1;Parent=Msa0514890;Name=Msa0514890-mRNA-1;_AED=0.08;_eAED=0.08;_QI=316|1|1|1|1|1|14|405|720 |
| chr3_4 | exon | 65783522 | 65784385 | 65783522 | ID=Msa0514890-mRNA-1:exon:16894;Parent=Msa0514890-mRNA-1 |
| chr3_4 | exon | 65784522 | 65784625 | 65784522 | ID=Msa0514890-mRNA-1:exon:16893;Parent=Msa0514890-mRNA-1 |
| chr3_4 | exon | 65784752 | 65784965 | 65784752 | ID=Msa0514890-mRNA-1:exon:16892;Parent=Msa0514890-mRNA-1 |
| chr3_4 | exon | 65785622 | 65785709 | 65785622 | ID=Msa0514890-mRNA-1:exon:16891;Parent=Msa0514890-mRNA-1 |
| chr3_4 | exon | 65785812 | 65785942 | 65785812 | ID=Msa0514890-mRNA-1:exon:16890;Parent=Msa0514890-mRNA-1 |
| chr3_4 | exon | 65786930 | 65787102 | 65786930 | ID=Msa0514890-mRNA-1:exon:16889;Parent=Msa0514890-mRNA-1 |
| chr3_4 | exon | 65788561 | 65788625 | 65788561 | ID=Msa0514890-mRNA-1:exon:16888;Parent=Msa0514890-mRNA-1 |
| chr3_4 | exon | 65788751 | 65788831 | 65788751 | ID=Msa0514890-mRNA-1:exon:16887;Parent=Msa0514890-mRNA-1 |
| chr3_4 | exon | 65789160 | 65789299 | 65789160 | ID=Msa0514890-mRNA-1:exon:16886;Parent=Msa0514890-mRNA-1 |
| chr3_4 | exon | 65789397 | 65789483 | 65789397 | ID=Msa0514890-mRNA-1:exon:16885;Parent=Msa0514890-mRNA-1 |
| chr3_4 | exon | 65790098 | 65790311 | 65790098 | ID=Msa0514890-mRNA-1:exon:16884;Parent=Msa0514890-mRNA-1 |
| chr3_4 | exon | 65791071 | 65791229 | 65791071 | ID=Msa0514890-mRNA-1:exon:16883;Parent=Msa0514890-mRNA-1 |
| chr3_4 | exon | 65791806 | 65791885 | 65791806 | ID=Msa0514890-mRNA-1:exon:16882;Parent=Msa0514890-mRNA-1 |
| chr3_4 | exon | 65792715 | 65793198 | 65792715 | ID=Msa0514890-mRNA-1:exon:16881;Parent=Msa0514890-mRNA-1 |
| chr3_4 | five_prime_UTR | 65792883 | 65793198 | 65792883 | ID=Msa0514890-mRNA-1:five_prime_utr;Parent=Msa0514890-mRNA-1 |
| chr3_4 | CDS | 65792715 | 65792882 | 65792715 | ID=Msa0514890-mRNA-1:cds;Parent=Msa0514890-mRNA-1 |
| chr3_4 | CDS | 65791806 | 65791885 | 65791806 | ID=Msa0514890-mRNA-1:cds;Parent=Msa0514890-mRNA-1 |
| chr3_4 | CDS | 65791071 | 65791229 | 65791071 | ID=Msa0514890-mRNA-1:cds;Parent=Msa0514890-mRNA-1 |
| chr3_4 | CDS | 65790098 | 65790311 | 65790098 | ID=Msa0514890-mRNA-1:cds;Parent=Msa0514890-mRNA-1 |
| chr3_4 | CDS | 65789397 | 65789483 | 65789397 | ID=Msa0514890-mRNA-1:cds;Parent=Msa0514890-mRNA-1 |
| chr3_4 | CDS | 65789160 | 65789299 | 65789160 | ID=Msa0514890-mRNA-1:cds;Parent=Msa0514890-mRNA-1 |
| chr3_4 | CDS | 65788751 | 65788831 | 65788751 | ID=Msa0514890-mRNA-1:cds;Parent=Msa0514890-mRNA-1 |
| chr3_4 | CDS | 65788561 | 65788625 | 65788561 | ID=Msa0514890-mRNA-1:cds;Parent=Msa0514890-mRNA-1 |
| chr3_4 | CDS | 65786930 | 65787102 | 65786930 | ID=Msa0514890-mRNA-1:cds;Parent=Msa0514890-mRNA-1 |
| chr3_4 | CDS | 65785812 | 65785942 | 65785812 | ID=Msa0514890-mRNA-1:cds;Parent=Msa0514890-mRNA-1 |
| chr3_4 | CDS | 65785622 | 65785709 | 65785622 | ID=Msa0514890-mRNA-1:cds;Parent=Msa0514890-mRNA-1 |
| chr3_4 | CDS | 65784752 | 65784965 | 65784752 | ID=Msa0514890-mRNA-1:cds;Parent=Msa0514890-mRNA-1 |
| chr3_4 | CDS | 65784522 | 65784625 | 65784522 | ID=Msa0514890-mRNA-1:cds;Parent=Msa0514890-mRNA-1 |
| chr3_4 | CDS | 65783927 | 65784385 | 65783927 | ID=Msa0514890-mRNA-1:cds;Parent=Msa0514890-mRNA-1 |
| chr3_4 | three_prime_UTR | 65783522 | 65783926 | 65783522 | ID=Msa0514890-mRNA-1:three_prime_utr;Parent=Msa0514890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
