Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0469170 | XP_003601923.1 | 98.056 | 720 | 14 | 0 | 1 | 720 | 1 | 720 | 0.0 | 1462 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0469170 | sp|Q54Q92|LMD2A_DICDI | 29.293 | 495 | 320 | 12 | 55 | 541 | 110 | 582 | 1.07e-51 | 195 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0469170 | G7J381 | 98.056 | 720 | 14 | 0 | 1 | 720 | 1 | 720 | 0.0 | 1462 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0469170 | Msa0514890 | 0.811629 | 6.361774e-51 | -8.615850e-47 |
| Msa0469170 | Msa0567370 | 0.806632 | 7.485009e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0469170 | MtrunA17_Chr3g0123731 | 98.056 | 720 | 14 | 0 | 1 | 720 | 1 | 720 | 0.0 | 1462 |
| Msa0469170 | MtrunA17_Chr8g0381781 | 80.166 | 721 | 137 | 4 | 1 | 718 | 1 | 718 | 0.0 | 1209 |
| Msa0469170 | MtrunA17_Chr4g0050171 | 73.650 | 463 | 120 | 2 | 1 | 462 | 1 | 462 | 0.0 | 715 |
| Msa0469170 | MtrunA17_Chr4g0050161 | 48.438 | 256 | 102 | 10 | 464 | 709 | 1 | 236 | 2.02e-57 | 195 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0469170 | AT5G65290.1 | 71.196 | 736 | 190 | 9 | 1 | 720 | 1 | 730 | 0.0 | 1041 |
| Msa0469170 | AT5G65290.2 | 78.333 | 540 | 111 | 3 | 1 | 536 | 1 | 538 | 0.0 | 869 |
Find 205 sgRNAs with CRISPR-Local
Find 617 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACAACGCCGTCCCTTTATT+TGG | 0.138899 | 3_3:-70916631 | Msa0469170:CDS |
| TTCTCGTCCCTGCTGATATT+TGG | 0.160912 | 3_3:-70924208 | Msa0469170:CDS |
| CATCACTGTACAAGATAATT+TGG | 0.177518 | 3_3:+70915514 | None:intergenic |
| AAACCACAAGGCGGGCAATT+AGG | 0.191717 | 3_3:-70920744 | Msa0469170:CDS |
| TCAAATATAGTTTCTTTATT+AGG | 0.194715 | 3_3:+70917329 | None:intergenic |
| GTTACTGGTGCATTTCTTCT+TGG | 0.197302 | 3_3:-70921725 | Msa0469170:CDS |
| ATGGAGGTATTTCTTTCTTT+TGG | 0.213086 | 3_3:-70923329 | Msa0469170:CDS |
| TGACCTTTCCGCCGACTCTA+TGG | 0.219519 | 3_3:-70915340 | Msa0469170:three_prime_UTR |
| GTTAACTGAGCTGGTTTGTC+TGG | 0.226512 | 3_3:+70917532 | None:intergenic |
| CAAAATTTATCCGCTTATTA+TGG | 0.237697 | 3_3:-70916596 | Msa0469170:CDS |
| CAATAGCATTTGAAAGTTCT+TGG | 0.239288 | 3_3:+70921588 | None:intergenic |
| TATTATTTGCAGAATTCTTT+TGG | 0.241151 | 3_3:-70918730 | Msa0469170:intron |
| ATGACTTGCTCAAATACTTT+TGG | 0.241273 | 3_3:-70921752 | Msa0469170:CDS |
| TGTCTCTTCATCCATAGTTT+TGG | 0.243444 | 3_3:+70915999 | None:intergenic |
| AACCACAAGGCGGGCAATTA+GGG | 0.255023 | 3_3:-70920743 | Msa0469170:CDS |
| TTAAACTTGTCCCCAAATAA+AGG | 0.258247 | 3_3:+70916619 | None:intergenic |
| CATCTTCAAAACCTTGAATA+AGG | 0.267615 | 3_3:+70922683 | None:intergenic |
| AGTATTGATTCTAAATTCTA+AGG | 0.268494 | 3_3:+70915369 | None:intergenic |
| CGCCTTGAAGAGGTCAAAAT+TGG | 0.276941 | 3_3:+70924489 | None:intergenic |
| ACAACGCCGTCCCTTTATTT+GGG | 0.282924 | 3_3:-70916630 | Msa0469170:CDS |
| CTCGCATCAGCGCCACCTCT+TGG | 0.288446 | 3_3:+70924464 | None:intergenic |
| AGCAAGTACGCTGCAATTAG+AGG | 0.298768 | 3_3:-70915943 | Msa0469170:CDS |
| TGAGGAAGTTGTATGATATA+GGG | 0.300928 | 3_3:+70917369 | None:intergenic |
| AGTTTGTTGCCACCGCGTTT+TGG | 0.301714 | 3_3:+70924539 | None:intergenic |
| TCTCGTCCCTGCTGATATTT+GGG | 0.304058 | 3_3:-70924207 | Msa0469170:CDS |
| CAAAACTGAAGCAGAGGATA+TGG | 0.304694 | 3_3:-70916494 | Msa0469170:CDS |
| TGCAGCGTACTTGCTGCTTA+TGG | 0.304776 | 3_3:+70915951 | None:intergenic |
| ATACAGGTGTAAAGTGTTAT+TGG | 0.305810 | 3_3:-70915552 | Msa0469170:three_prime_UTR |
| GGTGCATTTCTTCTTGGCTT+TGG | 0.312260 | 3_3:-70921719 | Msa0469170:CDS |
| AATGATGAATATCATCAAAA+AGG | 0.323079 | 3_3:+70915585 | None:intergenic |
| GGGATCCTTATTTAATACTT+TGG | 0.324766 | 3_3:-70920077 | Msa0469170:CDS |
| AAGCAGGAGTGGGAGCCTTA+TGG | 0.325612 | 3_3:-70921783 | Msa0469170:intron |
| GGATCCTTATTTAATACTTT+GGG | 0.327645 | 3_3:-70920076 | Msa0469170:intron |
| TTGAGGAAGTTGTATGATAT+AGG | 0.327982 | 3_3:+70917368 | None:intergenic |
| TACTACTCTTTGTTCAAAAT+CGG | 0.331193 | 3_3:-70917581 | Msa0469170:CDS |
| CATCCAGTTTGACAGCCATT+TGG | 0.337713 | 3_3:+70921618 | None:intergenic |
| TGGAGCACCATCTTCGGGTT+TGG | 0.340533 | 3_3:-70915824 | Msa0469170:CDS |
| ATCCAGTTTGACAGCCATTT+GGG | 0.348188 | 3_3:+70921619 | None:intergenic |
| ATTACCCAAAGTATTAAATA+AGG | 0.349352 | 3_3:+70920072 | None:intergenic |
| TTCAGCTGGAGCACCATCTT+CGG | 0.350183 | 3_3:-70915830 | Msa0469170:CDS |
| TGCCCAAATGGCTGTCAAAC+TGG | 0.351462 | 3_3:-70921621 | Msa0469170:CDS |
| AGCACCATTCCCGTTGTTAG+AGG | 0.360366 | 3_3:+70924323 | None:intergenic |
| CTTGAACAAGGGCGCAAAAT+CGG | 0.364439 | 3_3:-70916295 | Msa0469170:CDS |
| TATGGTTACATACACCGTTT+TGG | 0.368794 | 3_3:-70916578 | Msa0469170:CDS |
| CGGAGGTATATCCAAAACTA+TGG | 0.369717 | 3_3:-70916010 | Msa0469170:CDS |
| TTGAACAAGGGCGCAAAATC+GGG | 0.378695 | 3_3:-70916294 | Msa0469170:CDS |
| GCAATTAGGGGAAAATGATA+TGG | 0.380335 | 3_3:-70920730 | Msa0469170:CDS |
| TCAGCTGGAGCACCATCTTC+GGG | 0.382820 | 3_3:-70915829 | Msa0469170:CDS |
| AGCAGGGACGAGAATGATAA+TGG | 0.384683 | 3_3:+70924217 | None:intergenic |
| ATCTTCAAAACCTTGAATAA+GGG | 0.385541 | 3_3:+70922684 | None:intergenic |
| GTGAAATTCCTAAAAGCATC+TGG | 0.388838 | 3_3:-70921691 | Msa0469170:CDS |
| ACAAAGCTAAAGCAGCTATA+TGG | 0.389333 | 3_3:+70915266 | None:intergenic |
| TATGAACGCCGCAAGTCAAC+TGG | 0.391408 | 3_3:-70920270 | Msa0469170:CDS |
| TTCCCACAAAATTGCCCAAA+TGG | 0.393163 | 3_3:-70921633 | Msa0469170:CDS |
| AGCAGAGGATATGGATGGTT+TGG | 0.400479 | 3_3:-70916485 | Msa0469170:CDS |
| ACATCTGCTTGGAAGTTGCT+TGG | 0.405047 | 3_3:+70920944 | None:intergenic |
| CAACGGACTTGATATTGAAT+CGG | 0.409675 | 3_3:-70916239 | Msa0469170:CDS |
| AGCAGGAGTGGGAGCCTTAT+GGG | 0.410727 | 3_3:-70921782 | Msa0469170:intron |
| TAAACTTGTCCCCAAATAAA+GGG | 0.411598 | 3_3:+70916620 | None:intergenic |
| GCTGTGGCACCCCTTATTCA+AGG | 0.413324 | 3_3:-70922694 | Msa0469170:CDS |
| CCTGTTCGGACTGGCAAGTT+GGG | 0.417625 | 3_3:-70920097 | Msa0469170:CDS |
| CACTTCTTCAGTAATTAAAT+CGG | 0.419202 | 3_3:+70916035 | None:intergenic |
| TCGTCAATAACATTCATATA+AGG | 0.419796 | 3_3:+70920901 | None:intergenic |
| CATCTGCTTGGAAGTTGCTT+GGG | 0.419895 | 3_3:+70920945 | None:intergenic |
| CAGCCTAAAGATGAAAAGAT+AGG | 0.420719 | 3_3:-70915447 | Msa0469170:three_prime_UTR |
| TATCTAATTGTGGGATCCAT+TGG | 0.421566 | 3_3:-70922601 | Msa0469170:CDS |
| TGACGATATGCTTACTCAAA+TGG | 0.422170 | 3_3:-70920884 | Msa0469170:intron |
| CTTGGTCTTCTATCTAATTG+TGG | 0.424052 | 3_3:-70922611 | Msa0469170:CDS |
| ATTGGAGTTTAAAGTCTGAA+TGG | 0.424541 | 3_3:+70924507 | None:intergenic |
| TATCTATGATTGCAGCGAAT+GGG | 0.425215 | 3_3:-70916661 | Msa0469170:intron |
| CTAAACTAAGGCGTCATCTT+CGG | 0.426988 | 3_3:-70920680 | Msa0469170:CDS |
| CCTCGTCATTGTAAGTAACT+TGG | 0.428128 | 3_3:+70915635 | None:intergenic |
| CAGAGTTTCAAGTCCAACAT+AGG | 0.440272 | 3_3:-70915769 | Msa0469170:CDS |
| CCGCCTTGTGGTTTGAATGA+AGG | 0.440418 | 3_3:+70920753 | None:intergenic |
| TTGGAGTTTAAAGTCTGAAT+GGG | 0.444842 | 3_3:+70924508 | None:intergenic |
| CCCAACTTGCCAGTCCGAAC+AGG | 0.446107 | 3_3:+70920097 | None:intergenic |
| AGCACGTATCTAGGAACATC+TGG | 0.446451 | 3_3:+70924275 | None:intergenic |
| GATGAAGAGACAAGGAGATA+TGG | 0.447213 | 3_3:-70915988 | Msa0469170:CDS |
| ATCTCGCTTCCTCTAACAAC+GGG | 0.449941 | 3_3:-70924332 | Msa0469170:CDS |
| AACGGACTTGATATTGAATC+GGG | 0.450684 | 3_3:-70916238 | Msa0469170:CDS |
| TTCATCAAGCGCAGAATAAG+AGG | 0.451328 | 3_3:+70915873 | None:intergenic |
| TTGGTCTTCTATCTAATTGT+GGG | 0.454361 | 3_3:-70922610 | Msa0469170:CDS |
| TTAAGGAAACAAGTTGAGAA+AGG | 0.458142 | 3_3:-70918698 | Msa0469170:CDS |
| TTCTTCTCATTATGATGCAC+AGG | 0.460422 | 3_3:-70922564 | Msa0469170:CDS |
| TCTTATTCTGCGCTTGATGA+AGG | 0.462589 | 3_3:-70915871 | Msa0469170:CDS |
| TTATCGTATCTTCCAACTCA+AGG | 0.467532 | 3_3:+70920298 | None:intergenic |
| CATAAGTAAGTTAACTGAGC+TGG | 0.472174 | 3_3:+70917523 | None:intergenic |
| TAAAGAAACTATATTTGAAA+AGG | 0.474544 | 3_3:-70917324 | Msa0469170:intron |
| TTTCATCTTTAGGCTGCAAT+GGG | 0.475122 | 3_3:+70915454 | None:intergenic |
| TAAGTAACTTGGTTCAAAGA+TGG | 0.475479 | 3_3:+70915646 | None:intergenic |
| GACTAGTGTGCATGTTAACT+TGG | 0.477495 | 3_3:-70922629 | Msa0469170:CDS |
| TTGTTAGAGGAAGCGAGATC+AGG | 0.477817 | 3_3:+70924336 | None:intergenic |
| TGAGTATATAACTTATGTAC+TGG | 0.479540 | 3_3:-70920325 | Msa0469170:CDS |
| ATCATTTGGCAAGAGCATAC+AGG | 0.480713 | 3_3:-70915568 | Msa0469170:three_prime_UTR |
| CAAATTATCTTGTACAGTGA+TGG | 0.485607 | 3_3:-70915513 | Msa0469170:three_prime_UTR |
| AGAGTTTCAAGTCCAACATA+GGG | 0.488494 | 3_3:-70915768 | Msa0469170:CDS |
| ATCCCGCTTGGACATCTGCT+TGG | 0.488961 | 3_3:+70920933 | None:intergenic |
| GCGCAAAATCGGGGAAGAGC+AGG | 0.491919 | 3_3:-70916284 | Msa0469170:CDS |
| ACACGTTTATAAACTCGTAA+AGG | 0.492225 | 3_3:+70924641 | None:intergenic |
| GAGGAAGTTGTATGATATAG+GGG | 0.492511 | 3_3:+70917370 | None:intergenic |
| CAACGCCGTCCCTTTATTTG+GGG | 0.494059 | 3_3:-70916629 | Msa0469170:CDS |
| CAGATGCACATGTACATAAG+TGG | 0.495157 | 3_3:+70917608 | None:intergenic |
| GCATCTGGAGAAATGCTGAT+TGG | 0.499524 | 3_3:-70921676 | Msa0469170:CDS |
| TCCCCTAATTGCCCGCCTTG+TGG | 0.501900 | 3_3:+70920741 | None:intergenic |
| ACCTGTTCGGACTGGCAAGT+TGG | 0.503123 | 3_3:-70920098 | Msa0469170:CDS |
| CCTCTTGGCGCGCCTTGAAG+AGG | 0.503470 | 3_3:+70924479 | None:intergenic |
| GTACGCTGCAATTAGAGGGC+AGG | 0.507649 | 3_3:-70915938 | Msa0469170:CDS |
| TCATTATGATGCACAGGACC+TGG | 0.509715 | 3_3:-70922558 | Msa0469170:intron |
| TTAACTGAGCTGGTTTGTCT+GGG | 0.512639 | 3_3:+70917533 | None:intergenic |
| ACGGCAAACACAGGAAAATA+CGG | 0.512908 | 3_3:-70915725 | Msa0469170:CDS |
| TGTAAAATAATTAGTCCGGA+TGG | 0.513683 | 3_3:+70916460 | None:intergenic |
| TATAAAATCCGTTCGAACAC+AGG | 0.517451 | 3_3:-70918582 | Msa0469170:CDS |
| AGGAGTATTATAGATACAAA+AGG | 0.519923 | 3_3:-70920647 | Msa0469170:intron |
| AAGTCATGGCAAATCCCATA+AGG | 0.521001 | 3_3:+70921768 | None:intergenic |
| AAATTATCTTGTACAGTGAT+GGG | 0.522109 | 3_3:-70915512 | Msa0469170:three_prime_UTR |
| TGAATATATGAATCCAAGCC+AGG | 0.522345 | 3_3:+70915199 | None:intergenic |
| AGCAGGTTGTTCCACTTGCA+AGG | 0.522946 | 3_3:-70916267 | Msa0469170:CDS |
| ACGGTGAAAAGCACGTATCT+AGG | 0.525843 | 3_3:+70924266 | None:intergenic |
| CCGCCGACTCTATGGGAACA+TGG | 0.526085 | 3_3:-70915332 | Msa0469170:three_prime_UTR |
| GACCTTTCCGCCGACTCTAT+GGG | 0.526531 | 3_3:-70915339 | Msa0469170:three_prime_UTR |
| CTTCGGGTTTGGCTTCGACA+TGG | 0.526937 | 3_3:-70915813 | Msa0469170:CDS |
| ATAGCTTCTCACAATGAGAA+TGG | 0.527440 | 3_3:-70923348 | Msa0469170:CDS |
| TTCACGTTGAGGTACTTCGC+TGG | 0.527462 | 3_3:-70924299 | Msa0469170:CDS |
| CCGTTGAAATTCCTTGCAAG+TGG | 0.528401 | 3_3:+70916256 | None:intergenic |
| TAATCGCGTTTGTGTGTGAA+AGG | 0.528663 | 3_3:-70924384 | Msa0469170:five_prime_UTR |
| GATCTCGCTTCCTCTAACAA+CGG | 0.537993 | 3_3:-70924333 | Msa0469170:CDS |
| GACCGAGGCGAATGAGATTG+AGG | 0.539105 | 3_3:+70917351 | None:intergenic |
| AGTAATTCTAGAAATTCAGC+TGG | 0.539123 | 3_3:-70915844 | Msa0469170:CDS |
| AGAAGTCAATGGCTAAACTA+AGG | 0.542357 | 3_3:-70920692 | Msa0469170:CDS |
| TATCGTATCTTCCAACTCAA+GGG | 0.546729 | 3_3:+70920299 | None:intergenic |
| ATGGATGGTTTGGATCCATC+CGG | 0.547244 | 3_3:-70916475 | Msa0469170:CDS |
| ATTCAAGCATCAGACCTGTT+CGG | 0.547965 | 3_3:-70920111 | Msa0469170:CDS |
| TTCCTCAATCTCATTCGCCT+CGG | 0.548073 | 3_3:-70917353 | Msa0469170:CDS |
| AAAGGGAGAAAGAGAGATGT+GGG | 0.550225 | 3_3:-70924366 | Msa0469170:exon |
| TGTACTGGAAGCCCTTGAGT+TGG | 0.550473 | 3_3:-70920310 | Msa0469170:CDS |
| AACACAGGAGCTACTTGTGC+AGG | 0.550794 | 3_3:-70918567 | Msa0469170:intron |
| ATGAAAAGATAGGCTACTAC+AGG | 0.551564 | 3_3:-70915437 | Msa0469170:three_prime_UTR |
| AGCATCAGACCTGTTCGGAC+TGG | 0.552727 | 3_3:-70920106 | Msa0469170:CDS |
| GAGCGGTCTTGGCTTGAACA+AGG | 0.552878 | 3_3:-70916307 | Msa0469170:CDS |
| CCACTTGCAAGGAATTTCAA+CGG | 0.553080 | 3_3:-70916256 | Msa0469170:CDS |
| GTCGAAGCCAAACCCGAAGA+TGG | 0.553952 | 3_3:+70915817 | None:intergenic |
| TACAATGACGAGGATTAAGA+TGG | 0.555603 | 3_3:-70915625 | Msa0469170:exon |
| AGTACCGCCCAAATATCAGC+AGG | 0.559037 | 3_3:+70924200 | None:intergenic |
| TACGCTGCAATTAGAGGGCA+GGG | 0.559127 | 3_3:-70915937 | Msa0469170:CDS |
| CTTCAAGGCGCGCCAAGAGG+TGG | 0.559778 | 3_3:-70924476 | Msa0469170:five_prime_UTR |
| CAGGAAAATACGGTCTCTCG+TGG | 0.565236 | 3_3:-70915715 | Msa0469170:CDS |
| GAAGTTGCTTGCAACCAAAA+CGG | 0.565444 | 3_3:+70916564 | None:intergenic |
| TGATACAGATGAGAAGTCAA+TGG | 0.567799 | 3_3:-70920703 | Msa0469170:CDS |
| ATCTATGATTGCAGCGAATG+GGG | 0.568014 | 3_3:-70916660 | Msa0469170:intron |
| GCAAGTACGCTGCAATTAGA+GGG | 0.570104 | 3_3:-70915942 | Msa0469170:CDS |
| CTTCATTCAAACCACAAGGC+GGG | 0.573322 | 3_3:-70920752 | Msa0469170:CDS |
| TCTTCAAAACCTTGAATAAG+GGG | 0.580909 | 3_3:+70922685 | None:intergenic |
| ACGAGGATTAAGATGGAAGC+CGG | 0.581615 | 3_3:-70915618 | Msa0469170:exon |
| AAGTAGCTCCTGTGTTCGAA+CGG | 0.584062 | 3_3:+70918574 | None:intergenic |
| AATAATTCCGAAAAGACCAA+TGG | 0.585598 | 3_3:+70922585 | None:intergenic |
| TTCCAAGCAGATGTCCAAGC+GGG | 0.587731 | 3_3:-70920935 | Msa0469170:CDS |
| GTGGGAAAGAACTTTCTGGC+GGG | 0.588522 | 3_3:+70921649 | None:intergenic |
| GTATTTCTTCAGGAGAGGAA+CGG | 0.591443 | 3_3:-70916078 | Msa0469170:intron |
| AATCGCGTTTGTGTGTGAAA+GGG | 0.593753 | 3_3:-70924383 | Msa0469170:five_prime_UTR |
| ACATGGCAAACAATGAAGAC+AGG | 0.594497 | 3_3:-70915796 | Msa0469170:CDS |
| AAAAGTATTTGAGCAAGTCA+TGG | 0.600122 | 3_3:+70921754 | None:intergenic |
| TTCCCATAGAGTCGGCGGAA+AGG | 0.601878 | 3_3:+70915337 | None:intergenic |
| AGCGGTCTTGGCTTGAACAA+GGG | 0.602451 | 3_3:-70916306 | Msa0469170:CDS |
| TTAATTACTGAAGAAGTGAA+CGG | 0.603520 | 3_3:-70916030 | Msa0469170:CDS |
| AGGTCTCAAAGGATCCCGCT+TGG | 0.604904 | 3_3:+70920921 | None:intergenic |
| TTTACCCCTACGGCAAACAC+AGG | 0.604921 | 3_3:-70915734 | Msa0469170:CDS |
| CGTCCCTGCTGATATTTGGG+CGG | 0.611244 | 3_3:-70924204 | Msa0469170:intron |
| TCATCTTCGGAATGCTCGTG+AGG | 0.613725 | 3_3:-70920667 | Msa0469170:CDS |
| TAGTTTCTTTATTAGGACCG+AGG | 0.614327 | 3_3:+70917336 | None:intergenic |
| ACATTCATATAAGGTCTCAA+AGG | 0.619065 | 3_3:+70920910 | None:intergenic |
| CCAAGTTACTTACAATGACG+AGG | 0.620005 | 3_3:-70915635 | Msa0469170:CDS |
| GCTTCCTCTAACAACGGGAA+TGG | 0.622110 | 3_3:-70924327 | Msa0469170:CDS |
| CTGCAATTAGAGGGCAGGGT+GGG | 0.622483 | 3_3:-70915933 | Msa0469170:CDS |
| AAAAGCGATAGATCAATGCT+AGG | 0.623744 | 3_3:+70918614 | None:intergenic |
| CCTCTTCAAGGCGCGCCAAG+AGG | 0.624523 | 3_3:-70924479 | Msa0469170:five_prime_UTR |
| CAAACCATCCAGTTGACTTG+CGG | 0.625928 | 3_3:+70920262 | None:intergenic |
| TGAACAAGGGCGCAAAATCG+GGG | 0.626860 | 3_3:-70916293 | Msa0469170:CDS |
| ACCACAAGGCGGGCAATTAG+GGG | 0.627913 | 3_3:-70920742 | Msa0469170:CDS |
| GAAAGGGAGAAAGAGAGATG+TGG | 0.630616 | 3_3:-70924367 | Msa0469170:exon |
| AACTCGTAAAGGTTACTGAA+CGG | 0.630908 | 3_3:+70924652 | None:intergenic |
| CCATGTTCCCATAGAGTCGG+CGG | 0.631054 | 3_3:+70915332 | None:intergenic |
| GAACCATGTTCCCATAGAGT+CGG | 0.631380 | 3_3:+70915329 | None:intergenic |
| AGGAAGTTGTATGATATAGG+GGG | 0.634202 | 3_3:+70917371 | None:intergenic |
| ACTGAAGCAGAGGATATGGA+TGG | 0.638835 | 3_3:-70916490 | Msa0469170:CDS |
| CTTGTCCCCAAATAAAGGGA+CGG | 0.643271 | 3_3:+70916624 | None:intergenic |
| GTGTATGTAACCATAATAAG+CGG | 0.646657 | 3_3:+70916586 | None:intergenic |
| CTCATCAAGTGACTCAGACG+AGG | 0.649535 | 3_3:+70915690 | None:intergenic |
| GAGTTTCAAGTCCAACATAG+GGG | 0.653222 | 3_3:-70915767 | Msa0469170:CDS |
| GATTATAGATCGAAATTGTG+AGG | 0.655925 | 3_3:+70924421 | None:intergenic |
| GCTTCTCACAATGAGAATGG+AGG | 0.663834 | 3_3:-70923345 | Msa0469170:CDS |
| GAAACAAGTTGAGAAAGGCA+TGG | 0.668398 | 3_3:-70918693 | Msa0469170:CDS |
| AACGCCGCAAGTCAACTGGA+TGG | 0.668525 | 3_3:-70920266 | Msa0469170:intron |
| TGTGGGAAAGAACTTTCTGG+CGG | 0.668683 | 3_3:+70921648 | None:intergenic |
| GATCCTTCATTCAAACCACA+AGG | 0.673960 | 3_3:-70920756 | Msa0469170:CDS |
| AAACTATGGATGAAGAGACA+AGG | 0.676921 | 3_3:-70915996 | Msa0469170:CDS |
| TGAATCGGGTAACAACTATG+TGG | 0.678863 | 3_3:-70916224 | Msa0469170:intron |
| AGGAAAATACGGTCTCTCGT+GGG | 0.680794 | 3_3:-70915714 | Msa0469170:CDS |
| CCCCGGAAACCAAAACGCGG+TGG | 0.681097 | 3_3:-70924548 | Msa0469170:five_prime_UTR |
| ACAGAACCAAGTATATCCAA+CGG | 0.692277 | 3_3:+70924247 | None:intergenic |
| TATAGATCGAAATTGTGAGG+TGG | 0.696239 | 3_3:+70924424 | None:intergenic |
| ATTACTGAAGAAGTGAACGG+AGG | 0.701852 | 3_3:-70916027 | Msa0469170:CDS |
| CTTCCAAGCAGATGTCCAAG+CGG | 0.707280 | 3_3:-70920936 | Msa0469170:CDS |
| CCTTCATTCAAACCACAAGG+CGG | 0.708725 | 3_3:-70920753 | Msa0469170:CDS |
| GCTGCAATTAGAGGGCAGGG+TGG | 0.716544 | 3_3:-70915934 | Msa0469170:CDS |
| GTACCGCCCAAATATCAGCA+GGG | 0.734973 | 3_3:+70924201 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAGGATATAAATATAAT+TGG | + | chr3_3:70922450-70922469 | None:intergenic | 10.0% |
| !!! | AGGAAATATATAAGTTTTTA+CGG | - | chr3_3:70917105-70917124 | Msa0469170:intron | 15.0% |
| !! | TTATCAGAAATGAAATAAAT+TGG | - | chr3_3:70917566-70917585 | Msa0469170:CDS | 15.0% |
| !! | AATAAATTGGAACATATTAT+TGG | - | chr3_3:70917579-70917598 | Msa0469170:CDS | 15.0% |
| !!! | ATTATTGGATATTTTAATGA+TGG | - | chr3_3:70917594-70917613 | Msa0469170:CDS | 15.0% |
| !! | GAATAGAATGAAAAAATAAT+AGG | + | chr3_3:70917739-70917758 | None:intergenic | 15.0% |
| !! | TTCGTTTATTTGAATTATAT+AGG | - | chr3_3:70918897-70918916 | Msa0469170:intron | 15.0% |
| !! | AAATTATAGCATGAAAATTT+GGG | + | chr3_3:70919726-70919745 | None:intergenic | 15.0% |
| !! | ATATATATATATATAGAGTC+AGG | - | chr3_3:70919903-70919922 | Msa0469170:intron | 15.0% |
| !!! | CTTTTAATTTTTGTTTTGTT+GGG | + | chr3_3:70920011-70920030 | None:intergenic | 15.0% |
| !!! | TCTTTTAATTTTTGTTTTGT+TGG | + | chr3_3:70920012-70920031 | None:intergenic | 15.0% |
| !! | AAAATTAAAAGAACAAATAG+AGG | - | chr3_3:70920020-70920039 | Msa0469170:intron | 15.0% |
| !! | ATGATTGTTCTTAAAATTAT+TGG | - | chr3_3:70920303-70920322 | Msa0469170:CDS | 15.0% |
| !! | TGATTGTTCTTAAAATTATT+GGG | - | chr3_3:70920304-70920323 | Msa0469170:CDS | 15.0% |
| !!! | TATTTTGTTAGATCTTTATT+AGG | + | chr3_3:70920338-70920357 | None:intergenic | 15.0% |
| !! | AAAGATCTAACAAAATAAAT+TGG | - | chr3_3:70920341-70920360 | Msa0469170:intron | 15.0% |
| !! | AAGATCTAACAAAATAAATT+GGG | - | chr3_3:70920342-70920361 | Msa0469170:intron | 15.0% |
| !! | TATATATATATATATGAGTC+AGG | + | chr3_3:70920650-70920669 | None:intergenic | 15.0% |
| !!! | TTAGAGAATTTTTTATATGT+TGG | - | chr3_3:70921337-70921356 | Msa0469170:intron | 15.0% |
| !! | GTAATTTAGAAGTTAATATT+AGG | - | chr3_3:70921589-70921608 | Msa0469170:CDS | 15.0% |
| !! | TAACATAATATCAAGATATT+GGG | - | chr3_3:70921634-70921653 | Msa0469170:CDS | 15.0% |
| !! | TCAAATATAGTTTCTTTATT+AGG | + | chr3_3:70922542-70922561 | None:intergenic | 15.0% |
| !! | TAAAGAAACTATATTTGAAA+AGG | - | chr3_3:70922544-70922563 | Msa0469170:intron | 15.0% |
| !!! | CTATTTCTTCATTAAATTTA+TGG | - | chr3_3:70922931-70922950 | Msa0469170:intron | 15.0% |
| !!! | TTTTTGTAAAATAATTAGTC+CGG | + | chr3_3:70923415-70923434 | None:intergenic | 15.0% |
| !!! | TTTAACTTAGTTAGTATCTT+AGG | - | chr3_3:70915770-70915789 | Msa0469170:CDS | 20.0% |
| !! | TTACAAAAATTTAGGTCATT+GGG | + | chr3_3:70916083-70916102 | None:intergenic | 20.0% |
| !!! | AATGACCTAAATTTTTGTAA+GGG | - | chr3_3:70916083-70916102 | Msa0469170:intron | 20.0% |
| !! | TTCAACTTTATATCGTTATA+AGG | - | chr3_3:70916419-70916438 | Msa0469170:intron | 20.0% |
| !! | TGCATTATTTCATTCAATAA+TGG | - | chr3_3:70916475-70916494 | Msa0469170:CDS | 20.0% |
| !! | AAATCACAAAAACTTGAAAT+TGG | + | chr3_3:70916605-70916624 | None:intergenic | 20.0% |
| !! | CCATATCATGATTAATATTT+CGG | + | chr3_3:70917083-70917102 | None:intergenic | 20.0% |
| !!! | AGGAAAATACTTTTAATATG+AGG | + | chr3_3:70917147-70917166 | None:intergenic | 20.0% |
| !! | TTTATTTCATTTCTGATAAG+AGG | + | chr3_3:70917565-70917584 | None:intergenic | 20.0% |
| !!! | TATTTGTCTATTTTTTGTCA+TGG | - | chr3_3:70917946-70917965 | Msa0469170:intron | 20.0% |
| !! | AATCATTCCTATAAAAAGTA+TGG | + | chr3_3:70918043-70918062 | None:intergenic | 20.0% |
| !!! | TGCAATATATTTTTTTTGTG+CGG | - | chr3_3:70918765-70918784 | Msa0469170:intron | 20.0% |
| !! | TCAAAATTCTCAATCAAATA+AGG | + | chr3_3:70919032-70919051 | None:intergenic | 20.0% |
| !! | ATTTAGCATAAATGTTGTAA+CGG | + | chr3_3:70919295-70919314 | None:intergenic | 20.0% |
| !! | TATATATATATCACCACATA+TGG | + | chr3_3:70919401-70919420 | None:intergenic | 20.0% |
| !! | ACAAAACAGAAAACAAAATT+AGG | + | chr3_3:70919634-70919653 | None:intergenic | 20.0% |
| !!! | AATTTTGTTTTCTGTTTTGT+TGG | - | chr3_3:70919634-70919653 | Msa0469170:intron | 20.0% |
| !! | GAAATTATAGCATGAAAATT+TGG | + | chr3_3:70919727-70919746 | None:intergenic | 20.0% |
| !!! | AATTTTCATGCTATAATTTC+AGG | - | chr3_3:70919727-70919746 | Msa0469170:intron | 20.0% |
| !!! | ATTTTCATGCTATAATTTCA+GGG | - | chr3_3:70919728-70919747 | Msa0469170:intron | 20.0% |
| !!! | ATTACCCAAAGTATTAAATA+AGG | + | chr3_3:70919799-70919818 | None:intergenic | 20.0% |
| !! | ATCCAAAATATTAAACCAAT+TGG | + | chr3_3:70920173-70920192 | None:intergenic | 20.0% |
| !! | ATGTAATATGAATTGTGATA+AGG | + | chr3_3:70920213-70920232 | None:intergenic | 20.0% |
| !! | TATCACAATTCATATTACAT+TGG | - | chr3_3:70920213-70920232 | Msa0469170:intron | 20.0% |
| !! | ACTTATATAGAATTATTGAG+TGG | + | chr3_3:70920245-70920264 | None:intergenic | 20.0% |
| !! | CAATAATTCTATATAAGTCA+TGG | - | chr3_3:70920247-70920266 | Msa0469170:intron | 20.0% |
| !! | TTTCACAGAATCAAAATAAT+TGG | - | chr3_3:70920407-70920426 | Msa0469170:intron | 20.0% |
| !!! | TTTTGATTAGATTTTTGTGA+TGG | - | chr3_3:70920691-70920710 | Msa0469170:CDS | 20.0% |
| !!! | TATTATTTGCAGAATTCTTT+TGG | - | chr3_3:70921138-70921157 | Msa0469170:intron | 20.0% |
| !! | GAACACAAATTTAATAAGAA+TGG | + | chr3_3:70921403-70921422 | None:intergenic | 20.0% |
| !! | CTTATTAAATTTGTGTTCTT+CGG | - | chr3_3:70921405-70921424 | Msa0469170:intron | 20.0% |
| !! | CTAACATAATATCAAGATAT+TGG | - | chr3_3:70921633-70921652 | Msa0469170:CDS | 20.0% |
| !!! | CCAATTTTTGCTTATATTTT+GGG | + | chr3_3:70921754-70921773 | None:intergenic | 20.0% |
| !!! | ACCAATTTTTGCTTATATTT+TGG | + | chr3_3:70921755-70921774 | None:intergenic | 20.0% |
| !!! | ATGTGATTTTCTTCTAAAAT+AGG | - | chr3_3:70921852-70921871 | Msa0469170:intron | 20.0% |
| !! | TAATGCAAACAAATTACTAA+TGG | - | chr3_3:70921936-70921955 | Msa0469170:intron | 20.0% |
| !!! | TTGTTGTATTTTACAATACA+GGG | + | chr3_3:70922121-70922140 | None:intergenic | 20.0% |
| !!! | ATTGTTGTATTTTACAATAC+AGG | + | chr3_3:70922122-70922141 | None:intergenic | 20.0% |
| !! | AAATATAGGTTATCTTATGT+TGG | + | chr3_3:70922995-70923014 | None:intergenic | 20.0% |
| !! | ACAACAAAACTAAGAAATAT+AGG | + | chr3_3:70923009-70923028 | None:intergenic | 20.0% |
| !!! | TGACAAAGTATTTAATTTTC+TGG | - | chr3_3:70923329-70923348 | Msa0469170:CDS | 20.0% |
| !!! | GACAAAGTATTTAATTTTCT+GGG | - | chr3_3:70923330-70923349 | Msa0469170:CDS | 20.0% |
| !!! | ACAAAGTATTTAATTTTCTG+GGG | - | chr3_3:70923331-70923350 | Msa0469170:CDS | 20.0% |
| !!! | GGACTAATTATTTTACAAAA+AGG | - | chr3_3:70923414-70923433 | Msa0469170:intron | 20.0% |
| !!! | ACTAAAGTTTTAACAACAAT+GGG | + | chr3_3:70923455-70923474 | None:intergenic | 20.0% |
| !!! | AACTAAAGTTTTAACAACAA+TGG | + | chr3_3:70923456-70923475 | None:intergenic | 20.0% |
| !! | AATGATGAATATCATCAAAA+AGG | + | chr3_3:70924286-70924305 | None:intergenic | 20.0% |
| !!! | TTTTGATGATATTCATCATT+TGG | - | chr3_3:70924286-70924305 | Msa0469170:CDS | 20.0% |
| !!! | AGTATTGATTCTAAATTCTA+AGG | + | chr3_3:70924502-70924521 | None:intergenic | 20.0% |
| ! | TTAGTTAGTATCTTAGGTTT+AGG | - | chr3_3:70915776-70915795 | Msa0469170:CDS | 25.0% |
| ! | GTAGAAAAACAATGTTGAAT+TGG | - | chr3_3:70915911-70915930 | Msa0469170:CDS | 25.0% |
| ! | CTTAATGCATTAAGGTATAT+TGG | + | chr3_3:70915979-70915998 | None:intergenic | 25.0% |
| ! | CAATATACCTTAATGCATTA+AGG | - | chr3_3:70915977-70915996 | Msa0469170:CDS | 25.0% |
| ! | CTTACAAAAATTTAGGTCAT+TGG | + | chr3_3:70916084-70916103 | None:intergenic | 25.0% |
| !! | CAATGACCTAAATTTTTGTA+AGG | - | chr3_3:70916082-70916101 | Msa0469170:intron | 25.0% |
| !! | ATGACCTAAATTTTTGTAAG+GGG | - | chr3_3:70916084-70916103 | Msa0469170:intron | 25.0% |
| !! | TGGTTTTTAAATTAGAAACC+AGG | - | chr3_3:70916136-70916155 | Msa0469170:intron | 25.0% |
| !!! | CATATTTTTTGTCAACACTT+TGG | + | chr3_3:70916225-70916244 | None:intergenic | 25.0% |
| ! | AGCTTAACCACAAAATAAAA+AGG | + | chr3_3:70916281-70916300 | None:intergenic | 25.0% |
| ! | AAGTTCAATTTGACTGTTAT+TGG | - | chr3_3:70916354-70916373 | Msa0469170:intron | 25.0% |
| ! | AGTTCAATTTGACTGTTATT+GGG | - | chr3_3:70916355-70916374 | Msa0469170:intron | 25.0% |
| ! | GAAAAAAATGTACTGTTTGA+AGG | + | chr3_3:70916402-70916421 | None:intergenic | 25.0% |
| ! | GTTATAAGGTGAAAATATTG+TGG | - | chr3_3:70916433-70916452 | Msa0469170:intron | 25.0% |
| ! | ATTAGATTAGATGCATAACA+AGG | + | chr3_3:70916805-70916824 | None:intergenic | 25.0% |
| ! | CCGAAATATTAATCATGATA+TGG | - | chr3_3:70917080-70917099 | Msa0469170:intron | 25.0% |
| ! | ATATTAATCATGATATGGCA+AGG | - | chr3_3:70917085-70917104 | Msa0469170:intron | 25.0% |
| !!! | TTAAAAGTATTTTCCTAAGC+AGG | - | chr3_3:70917151-70917170 | Msa0469170:intron | 25.0% |
| !!! | TAAAAGTATTTTCCTAAGCA+GGG | - | chr3_3:70917152-70917171 | Msa0469170:intron | 25.0% |
| ! | ATCTTCAAAACCTTGAATAA+GGG | + | chr3_3:70917187-70917206 | None:intergenic | 25.0% |
| ! | ATCAACGATTACAAAAAGTA+AGG | + | chr3_3:70917355-70917374 | None:intergenic | 25.0% |
| ! | AAATAATAGGTTCCATTGTT+TGG | + | chr3_3:70917726-70917745 | None:intergenic | 25.0% |
| !!! | AATAGAGCCATACTTTTTAT+AGG | - | chr3_3:70918033-70918052 | Msa0469170:intron | 25.0% |
| ! | AAATATGCATTGTAGAGTAT+TGG | - | chr3_3:70918586-70918605 | Msa0469170:CDS | 25.0% |
| ! | ACAAAGAAATGAAGAATTGA+CGG | + | chr3_3:70918645-70918664 | None:intergenic | 25.0% |
| !!! | GCAATATATTTTTTTTGTGC+GGG | - | chr3_3:70918766-70918785 | Msa0469170:intron | 25.0% |
| ! | TCGTCAATAACATTCATATA+AGG | + | chr3_3:70918970-70918989 | None:intergenic | 25.0% |
| ! | TCTAAACAAAGATAGCAATA+CGG | + | chr3_3:70919063-70919082 | None:intergenic | 25.0% |
| !!! | AGGAGTATTATAGATACAAA+AGG | - | chr3_3:70919221-70919240 | Msa0469170:intron | 25.0% |
| !!! | TCAGTTATATTTTTACACTG+AGG | - | chr3_3:70919315-70919334 | Msa0469170:intron | 25.0% |
| ! | TGAGTATATAACTTATGTAC+TGG | - | chr3_3:70919543-70919562 | Msa0469170:intron | 25.0% |
| !! | GGATCCTTATTTAATACTTT+GGG | - | chr3_3:70919792-70919811 | Msa0469170:intron | 25.0% |
| !!! | TTTTGAAACTTGCATTAATC+TGG | - | chr3_3:70920144-70920163 | Msa0469170:intron | 25.0% |
| !! | TTTGAAACTTGCATTAATCT+GGG | - | chr3_3:70920145-70920164 | Msa0469170:intron | 25.0% |
| !!! | GACCAATTGGTTTAATATTT+TGG | - | chr3_3:70920168-70920187 | Msa0469170:intron | 25.0% |
| ! | CTAACAAAATAAATTGGGAA+TGG | - | chr3_3:70920347-70920366 | Msa0469170:intron | 25.0% |
| ! | TTCAATATTGGATTATACCA+AGG | - | chr3_3:70920373-70920392 | Msa0469170:intron | 25.0% |
| ! | CAAAATAAATTTACCTCCTT+CGG | - | chr3_3:70920856-70920875 | Msa0469170:intron | 25.0% |
| !!! | AAATATATTGACTTCTCACT+AGG | + | chr3_3:70920919-70920938 | None:intergenic | 25.0% |
| !!! | CTCATACATACTTTTGTTTT+TGG | - | chr3_3:70920940-70920959 | Msa0469170:CDS | 25.0% |
| ! | TTGCACTATTTAAACATTCA+AGG | - | chr3_3:70921036-70921055 | Msa0469170:intron | 25.0% |
| !! | ATTTTTCTGTCTTTCGAATA+AGG | - | chr3_3:70921069-70921088 | Msa0469170:intron | 25.0% |
| !! | CTTTCGAATAAGGAATATTT+TGG | - | chr3_3:70921079-70921098 | Msa0469170:intron | 25.0% |
| !!! | ATAAGGAATATTTTGGTTAG+AGG | - | chr3_3:70921086-70921105 | Msa0469170:intron | 25.0% |
| ! | AAATTGTGGGTTCTTATTAA+TGG | - | chr3_3:70921114-70921133 | Msa0469170:intron | 25.0% |
| !! | TTCGGATTTTAGATAAAAAG+AGG | - | chr3_3:70921423-70921442 | Msa0469170:intron | 25.0% |
| ! | TTTCCAATTTACTTAGGATT+AGG | + | chr3_3:70921540-70921559 | None:intergenic | 25.0% |
| !!! | TTTTTGCTTATATTTTGGGA+CGG | + | chr3_3:70921750-70921769 | None:intergenic | 25.0% |
| ! | CCCAAAATATAAGCAAAAAT+TGG | - | chr3_3:70921751-70921770 | Msa0469170:CDS | 25.0% |
| ! | TCAACGAAAGTTAATGTATT+TGG | - | chr3_3:70921774-70921793 | Msa0469170:CDS | 25.0% |
| ! | TACTACTCTTTGTTCAAAAT+CGG | - | chr3_3:70922287-70922306 | Msa0469170:intron | 25.0% |
| !!! | TTTATATCCTATTTTTTCCC+AGG | - | chr3_3:70922456-70922475 | Msa0469170:intron | 25.0% |
| ! | TAATTATCCAAACCATTAAG+AGG | - | chr3_3:70922723-70922742 | Msa0469170:intron | 25.0% |
| ! | AATTATCCAAACCATTAAGA+GGG | - | chr3_3:70922724-70922743 | Msa0469170:intron | 25.0% |
| ! | TAAATCTAAATCCCTCTTAA+TGG | + | chr3_3:70922738-70922757 | None:intergenic | 25.0% |
| ! | AGAGGGATTTAGATTTAATA+TGG | - | chr3_3:70922741-70922760 | Msa0469170:intron | 25.0% |
| ! | TCATTCAACTTGATTCATAT+AGG | - | chr3_3:70922768-70922787 | Msa0469170:intron | 25.0% |
| ! | GCAAAATAGATGAAATGAAA+CGG | + | chr3_3:70922805-70922824 | None:intergenic | 25.0% |
| ! | TGCTTTCTTCAAAAATTGTT+TGG | - | chr3_3:70922840-70922859 | Msa0469170:intron | 25.0% |
| ! | CAAAAATCAAAATAGACAGA+AGG | + | chr3_3:70922971-70922990 | None:intergenic | 25.0% |
| ! | CAAAATTTATCCGCTTATTA+TGG | - | chr3_3:70923272-70923291 | Msa0469170:intron | 25.0% |
| !! | GTTAAAACTTTAGTTCAAGT+TGG | - | chr3_3:70923461-70923480 | Msa0469170:intron | 25.0% |
| !! | AATTACTTCCAATTTTGTGA+AGG | + | chr3_3:70923682-70923701 | None:intergenic | 25.0% |
| !! | TTGGAACTACTATTTTCTTT+TGG | - | chr3_3:70923738-70923757 | Msa0469170:intron | 25.0% |
| ! | CACTTCTTCAGTAATTAAAT+CGG | + | chr3_3:70923836-70923855 | None:intergenic | 25.0% |
| ! | TTAATTACTGAAGAAGTGAA+CGG | - | chr3_3:70923838-70923857 | Msa0469170:intron | 25.0% |
| ! | AAATTATCTTGTACAGTGAT+GGG | - | chr3_3:70924356-70924375 | Msa0469170:exon | 25.0% |
| !! | AAAAAAAACAATGTTTTGCC+TGG | - | chr3_3:70924651-70924670 | Msa0469170:five_prime_UTR | 25.0% |
| ACACGTTTATAAACTCGTAA+AGG | + | chr3_3:70915230-70915249 | None:intergenic | 30.0% | |
| ! | TTGGAGTTTAAAGTCTGAAT+GGG | + | chr3_3:70915363-70915382 | None:intergenic | 30.0% |
| ! | ATTGGAGTTTAAAGTCTGAA+TGG | + | chr3_3:70915364-70915383 | None:intergenic | 30.0% |
| GATTATAGATCGAAATTGTG+AGG | + | chr3_3:70915450-70915469 | None:intergenic | 30.0% | |
| ! | TCTTAGGTTTAGGATATGAT+AGG | - | chr3_3:70915786-70915805 | Msa0469170:CDS | 30.0% |
| AATGCTATCTAGAAGGTTAT+TGG | - | chr3_3:70915889-70915908 | Msa0469170:CDS | 30.0% | |
| ! | ACCTTAATGCATTAAGGTTT+TGG | - | chr3_3:70915983-70916002 | Msa0469170:CDS | 30.0% |
| TCCAAAACCTTAATGCATTA+AGG | + | chr3_3:70915987-70916006 | None:intergenic | 30.0% | |
| AGGAGAAAGATTTATAACGT+CGG | - | chr3_3:70916156-70916175 | Msa0469170:intron | 30.0% | |
| AAAGATTTATAACGTCGGAA+AGG | - | chr3_3:70916161-70916180 | Msa0469170:intron | 30.0% | |
| !!! | CTTCATGCCTTTTTATTTTG+TGG | - | chr3_3:70916271-70916290 | Msa0469170:CDS | 30.0% |
| TGAACTTAACATGAAAGAAG+AGG | + | chr3_3:70916341-70916360 | None:intergenic | 30.0% | |
| !!! | ATGGAGGTATTTCTTTCTTT+TGG | - | chr3_3:70916539-70916558 | Msa0469170:CDS | 30.0% |
| !! | AATTTTACAGCCTTCTAGAA+AGG | - | chr3_3:70916637-70916656 | Msa0469170:CDS | 30.0% |
| ACTAAAAACAAGGATTCTGA+AGG | + | chr3_3:70916768-70916787 | None:intergenic | 30.0% | |
| !!! | TCAGAATCCTTGTTTTTAGT+CGG | - | chr3_3:70916768-70916787 | Msa0469170:intron | 30.0% |
| TGCATTCATACTTACTCATA+CGG | + | chr3_3:70916917-70916936 | None:intergenic | 30.0% | |
| ! | GTGTTATTCATTACTACTTC+TGG | + | chr3_3:70916980-70916999 | None:intergenic | 30.0% |
| GTAGTAATGAATAACACATG+AGG | - | chr3_3:70916983-70917002 | Msa0469170:intron | 30.0% | |
| TCTTCAAAACCTTGAATAAG+GGG | + | chr3_3:70917186-70917205 | None:intergenic | 30.0% | |
| CATCTTCAAAACCTTGAATA+AGG | + | chr3_3:70917188-70917207 | None:intergenic | 30.0% | |
| ! | TTGGTCTTCTATCTAATTGT+GGG | - | chr3_3:70917258-70917277 | Msa0469170:intron | 30.0% |
| AATAATTCCGAAAAGACCAA+TGG | + | chr3_3:70917286-70917305 | None:intergenic | 30.0% | |
| ! | GACTCTAAAAAGCAATAACT+TGG | + | chr3_3:70917406-70917425 | None:intergenic | 30.0% |
| TTGGAAAGTAAGGAAAATTG+TGG | - | chr3_3:70917647-70917666 | Msa0469170:intron | 30.0% | |
| ! | AGGAAAATTGTGGTATTGAA+TGG | - | chr3_3:70917657-70917676 | Msa0469170:intron | 30.0% |
| ! | TTGTTTGGAACAGAATTGAA+TGG | + | chr3_3:70917711-70917730 | None:intergenic | 30.0% |
| TTCAATTCTGTTCCAAACAA+TGG | - | chr3_3:70917711-70917730 | Msa0469170:intron | 30.0% | |
| TTATGATTGGATTGATGCAA+GGG | + | chr3_3:70917766-70917785 | None:intergenic | 30.0% | |
| ACTCTTCATTCAATTGTTAG+TGG | - | chr3_3:70917871-70917890 | Msa0469170:intron | 30.0% | |
| ! | TGATTGATACTTTTGTAAGC+AGG | - | chr3_3:70918069-70918088 | Msa0469170:intron | 30.0% |
| !! | AAAAGTATTTGAGCAAGTCA+TGG | + | chr3_3:70918117-70918136 | None:intergenic | 30.0% |
| !!! | ATGACTTGCTCAAATACTTT+TGG | - | chr3_3:70918116-70918135 | Msa0469170:intron | 30.0% |
| !!! | AATACTTTTGGACTTGTTAC+TGG | - | chr3_3:70918128-70918147 | Msa0469170:intron | 30.0% |
| CAATAGCATTTGAAAGTTCT+TGG | + | chr3_3:70918283-70918302 | None:intergenic | 30.0% | |
| !! | TTTCTAGAGCACATAAAGTT+TGG | - | chr3_3:70918393-70918412 | Msa0469170:intron | 30.0% |
| TAAGCCATATAAACAAGAAC+AGG | + | chr3_3:70918459-70918478 | None:intergenic | 30.0% | |
| TGGACAAAGAAAATTAGAGA+GGG | + | chr3_3:70918501-70918520 | None:intergenic | 30.0% | |
| ! | TCTAATTTTCTTTGTCCAGT+TGG | - | chr3_3:70918503-70918522 | Msa0469170:intron | 30.0% |
| AAAGAAATGAAGAATTGACG+GGG | + | chr3_3:70918643-70918662 | None:intergenic | 30.0% | |
| CAAAGAAATGAAGAATTGAC+GGG | + | chr3_3:70918644-70918663 | None:intergenic | 30.0% | |
| ! | TCTTCATTTCTTTGTCCTTT+TGG | - | chr3_3:70918650-70918669 | Msa0469170:CDS | 30.0% |
| ! | CTTCATTTCTTTGTCCTTTT+GGG | - | chr3_3:70918651-70918670 | Msa0469170:CDS | 30.0% |
| ! | TTCATTTCTTTGTCCTTTTG+GGG | - | chr3_3:70918652-70918671 | Msa0469170:CDS | 30.0% |
| ACATTCATATAAGGTCTCAA+AGG | + | chr3_3:70918961-70918980 | None:intergenic | 30.0% | |
| GTGATCAATTTAGTATCTAG+TGG | - | chr3_3:70919251-70919270 | Msa0469170:intron | 30.0% | |
| !!! | CGAGTTATTTATTTTTGCTC+TGG | - | chr3_3:70919354-70919373 | Msa0469170:intron | 30.0% |
| TATATCACCACATATGGTTT+AGG | + | chr3_3:70919395-70919414 | None:intergenic | 30.0% | |
| CTGTCAAATCTTTACAACAA+AGG | - | chr3_3:70919463-70919482 | Msa0469170:intron | 30.0% | |
| !!! | GTTTTCTGTTTTGTTGGTTT+AGG | - | chr3_3:70919640-70919659 | Msa0469170:intron | 30.0% |
| ATAGCATGAAAATTTGGGTA+AGG | + | chr3_3:70919721-70919740 | None:intergenic | 30.0% | |
| ! | GGGATCCTTATTTAATACTT+TGG | - | chr3_3:70919791-70919810 | Msa0469170:intron | 30.0% |
| TCTGTGAACTAATCAACAAA+CGG | + | chr3_3:70919843-70919862 | None:intergenic | 30.0% | |
| ACAGAGAAAACAATGAAGAT+TGG | + | chr3_3:70920069-70920088 | None:intergenic | 30.0% | |
| TTGAAACTTGCATTAATCTG+GGG | - | chr3_3:70920146-70920165 | Msa0469170:intron | 30.0% | |
| !! | TGGGAATGGATTTTCAATAT+TGG | - | chr3_3:70920361-70920380 | Msa0469170:intron | 30.0% |
| GTGAAACAATATTTGATCCT+TGG | + | chr3_3:70920393-70920412 | None:intergenic | 30.0% | |
| ACAAGATTAATTCGTATGAG+CGG | - | chr3_3:70920576-70920595 | Msa0469170:intron | 30.0% | |
| !!! | AAGTCATTTTAACTTACACC+TGG | - | chr3_3:70920613-70920632 | Msa0469170:intron | 30.0% |
| ACATGATTGCAATATTGCAT+AGG | - | chr3_3:70920831-70920850 | Msa0469170:intron | 30.0% | |
| TGTCTTGTCTTTCTCAAATA+AGG | - | chr3_3:70920994-70921013 | Msa0469170:intron | 30.0% | |
| CTTTCTCAAATAAGGTTTCT+TGG | - | chr3_3:70921002-70921021 | Msa0469170:intron | 30.0% | |
| ATTCGAAAGACAGAAAAATG+AGG | + | chr3_3:70921068-70921087 | None:intergenic | 30.0% | |
| !! | TCTTTTGGAAATGCGTTTTA+AGG | - | chr3_3:70921153-70921172 | Msa0469170:intron | 30.0% |
| ! | TTAAGGAAACAAGTTGAGAA+AGG | - | chr3_3:70921170-70921189 | Msa0469170:intron | 30.0% |
| !! | TCGAACGGATTTTATAAGAA+TGG | + | chr3_3:70921282-70921301 | None:intergenic | 30.0% |
| AAACATCAACCCCTATTTAT+AGG | - | chr3_3:70921500-70921519 | Msa0469170:intron | 30.0% | |
| AACATCAACCCCTATTTATA+GGG | - | chr3_3:70921501-70921520 | Msa0469170:intron | 30.0% | |
| AATTTACTTAGGATTAGGAG+GGG | + | chr3_3:70921535-70921554 | None:intergenic | 30.0% | |
| CAATTTACTTAGGATTAGGA+GGG | + | chr3_3:70921536-70921555 | None:intergenic | 30.0% | |
| CCTAACTTTCCAATTTACTT+AGG | + | chr3_3:70921546-70921565 | None:intergenic | 30.0% | |
| CCTAAGTAAATTGGAAAGTT+AGG | - | chr3_3:70921543-70921562 | Msa0469170:intron | 30.0% | |
| TACACTTCTTTGTGATTAGA+TGG | - | chr3_3:70921801-70921820 | Msa0469170:intron | 30.0% | |
| ACACTTCTTTGTGATTAGAT+GGG | - | chr3_3:70921802-70921821 | Msa0469170:intron | 30.0% | |
| ! | AAATAAGCTTACTTCCCTTT+TGG | - | chr3_3:70921899-70921918 | Msa0469170:intron | 30.0% |
| ! | TTACCTTCATTTTCTTGTAC+AGG | - | chr3_3:70922223-70922242 | Msa0469170:intron | 30.0% |
| GAACAACAAACAAATATGAG+TGG | + | chr3_3:70922406-70922425 | None:intergenic | 30.0% | |
| TGAGGAAGTTGTATGATATA+GGG | + | chr3_3:70922502-70922521 | None:intergenic | 30.0% | |
| TTGAGGAAGTTGTATGATAT+AGG | + | chr3_3:70922503-70922522 | None:intergenic | 30.0% | |
| !! | ATTTTTGAAGAAAGCACACT+AGG | + | chr3_3:70922836-70922855 | None:intergenic | 30.0% |
| GGATTAAAAAAGTGAAGGAA+AGG | + | chr3_3:70923176-70923195 | None:intergenic | 30.0% | |
| ATCATAGATAAATTGTGCAC+TGG | + | chr3_3:70923197-70923216 | None:intergenic | 30.0% | |
| TAAACTTGTCCCCAAATAAA+GGG | + | chr3_3:70923251-70923270 | None:intergenic | 30.0% | |
| TTAAACTTGTCCCCAAATAA+AGG | + | chr3_3:70923252-70923271 | None:intergenic | 30.0% | |
| GTGTATGTAACCATAATAAG+CGG | + | chr3_3:70923285-70923304 | None:intergenic | 30.0% | |
| ! | TATTTTCAAAACTGAAGCAG+AGG | - | chr3_3:70923368-70923387 | Msa0469170:intron | 30.0% |
| TGTAAAATAATTAGTCCGGA+TGG | + | chr3_3:70923411-70923430 | None:intergenic | 30.0% | |
| TTGCAATACTTATGCTTGAT+TGG | - | chr3_3:70923522-70923541 | Msa0469170:intron | 30.0% | |
| !!! | GTTCTGTTTTATTTGTAGAG+CGG | - | chr3_3:70923544-70923563 | Msa0469170:intron | 30.0% |
| TAGACATTCCTTCACAAAAT+TGG | - | chr3_3:70923671-70923690 | Msa0469170:intron | 30.0% | |
| TTGGAAGTAATTTGACCTAA+TGG | - | chr3_3:70923690-70923709 | Msa0469170:intron | 30.0% | |
| ! | AGTAATTCTAGAAATTCAGC+TGG | - | chr3_3:70924024-70924043 | Msa0469170:intron | 30.0% |
| TAAGTAACTTGGTTCAAAGA+TGG | + | chr3_3:70924225-70924244 | None:intergenic | 30.0% | |
| ! | ATACAGGTGTAAAGTGTTAT+TGG | - | chr3_3:70924316-70924335 | Msa0469170:CDS | 30.0% |
| CATCACTGTACAAGATAATT+TGG | + | chr3_3:70924357-70924376 | None:intergenic | 30.0% | |
| CAAATTATCTTGTACAGTGA+TGG | - | chr3_3:70924355-70924374 | Msa0469170:exon | 30.0% | |
| ! | TAGCCTATCTTTTCATCTTT+AGG | + | chr3_3:70924427-70924446 | None:intergenic | 30.0% |
| GAAAGAAAAACTACGCTATA+TGG | + | chr3_3:70924564-70924583 | None:intergenic | 30.0% | |
| AACTCGTAAAGGTTACTGAA+CGG | + | chr3_3:70915219-70915238 | None:intergenic | 35.0% | |
| TATAGATCGAAATTGTGAGG+TGG | + | chr3_3:70915447-70915466 | None:intergenic | 35.0% | |
| ! | TTTTCACCGTTGGATATACT+TGG | - | chr3_3:70915615-70915634 | Msa0469170:exon | 35.0% |
| ACAGAACCAAGTATATCCAA+CGG | + | chr3_3:70915624-70915643 | None:intergenic | 35.0% | |
| TATGATAGGATTGCGTATCA+TGG | - | chr3_3:70915800-70915819 | Msa0469170:CDS | 35.0% | |
| !! | AGATAGCATTTCTAGTGTCA+TGG | + | chr3_3:70915879-70915898 | None:intergenic | 35.0% |
| CACTAGAAATGCTATCTAGA+AGG | - | chr3_3:70915882-70915901 | Msa0469170:CDS | 35.0% | |
| !!! | TAAGGTTTTGGATGAAGATG+CGG | - | chr3_3:70915995-70916014 | Msa0469170:CDS | 35.0% |
| CAAGCCCCTTACAAAAATTT+AGG | + | chr3_3:70916091-70916110 | None:intergenic | 35.0% | |
| ATGGAGAAGTTGTGAATAGT+TGG | - | chr3_3:70916116-70916135 | Msa0469170:intron | 35.0% | |
| GACGTTATAAATCTTTCTCC+TGG | + | chr3_3:70916157-70916176 | None:intergenic | 35.0% | |
| AATGATGTAGATGTACTGTG+TGG | - | chr3_3:70916184-70916203 | Msa0469170:intron | 35.0% | |
| AATATGCTGCCTCCTTATAA+TGG | - | chr3_3:70916239-70916258 | Msa0469170:CDS | 35.0% | |
| AAGCTTGTGTCAAATAAGTC+AGG | - | chr3_3:70916296-70916315 | Msa0469170:CDS | 35.0% | |
| ATAGCTTCTCACAATGAGAA+TGG | - | chr3_3:70916520-70916539 | Msa0469170:CDS | 35.0% | |
| !!! | GTATTTCTTTCTTTTGGAGC+TGG | - | chr3_3:70916545-70916564 | Msa0469170:CDS | 35.0% |
| ! | GGAGTACATTTTTGCTTACT+TGG | - | chr3_3:70916575-70916594 | Msa0469170:CDS | 35.0% |
| !! | GCTCAAATAACTCTGAAGTT+TGG | + | chr3_3:70916698-70916717 | None:intergenic | 35.0% |
| ! | TGAAGGTATGTTTGGGTTTA+GGG | + | chr3_3:70916751-70916770 | None:intergenic | 35.0% |
| ! | AGGATTCTGAAGGTATGTTT+GGG | + | chr3_3:70916758-70916777 | None:intergenic | 35.0% |
| ! | AAGGATTCTGAAGGTATGTT+TGG | + | chr3_3:70916759-70916778 | None:intergenic | 35.0% |
| ! | ATTCATTACTACTTCTGGAG+TGG | + | chr3_3:70916975-70916994 | None:intergenic | 35.0% |
| !!! | ATTCAAGGTTTTGAAGATGC+TGG | - | chr3_3:70917189-70917208 | Msa0469170:intron | 35.0% |
| !!! | TTCAAGGTTTTGAAGATGCT+GGG | - | chr3_3:70917190-70917209 | Msa0469170:intron | 35.0% |
| ! | CTTGGTCTTCTATCTAATTG+TGG | - | chr3_3:70917257-70917276 | Msa0469170:intron | 35.0% |
| TATCTAATTGTGGGATCCAT+TGG | - | chr3_3:70917267-70917286 | Msa0469170:intron | 35.0% | |
| TTCTTCTCATTATGATGCAC+AGG | - | chr3_3:70917304-70917323 | Msa0469170:intron | 35.0% | |
| TTACAAAAAGTAAGGCTAGG+AGG | + | chr3_3:70917347-70917366 | None:intergenic | 35.0% | |
| CGATTACAAAAAGTAAGGCT+AGG | + | chr3_3:70917350-70917369 | None:intergenic | 35.0% | |
| CATACTTTGTTACGATACGA+GGG | - | chr3_3:70917516-70917535 | Msa0469170:CDS | 35.0% | |
| GTTATGATTGGATTGATGCA+AGG | + | chr3_3:70917767-70917786 | None:intergenic | 35.0% | |
| CACATGCATACAGTTATGAT+TGG | + | chr3_3:70917779-70917798 | None:intergenic | 35.0% | |
| CTCAATTAAGTGTGAGAACT+AGG | - | chr3_3:70917800-70917819 | Msa0469170:intron | 35.0% | |
| TTGACAAGTTAGCATGAAGT+AGG | - | chr3_3:70917969-70917988 | Msa0469170:intron | 35.0% | |
| ! | ATACTTTTGTAAGCAGGAGT+GGG | - | chr3_3:70918075-70918094 | Msa0469170:intron | 35.0% |
| !! | GTGAAATTCCTAAAAGCATC+TGG | - | chr3_3:70918177-70918196 | Msa0469170:intron | 35.0% |
| ! | TTTTGTGGGAAAGAACTTTC+TGG | + | chr3_3:70918226-70918245 | None:intergenic | 35.0% |
| ! | ACCACCTGTTCTTGTTTATA+TGG | - | chr3_3:70918452-70918471 | Msa0469170:intron | 35.0% |
| ACAAAGAAAATTAGAGAGGG+TGG | + | chr3_3:70918498-70918517 | None:intergenic | 35.0% | |
| CTGGACAAAGAAAATTAGAG+AGG | + | chr3_3:70918502-70918521 | None:intergenic | 35.0% | |
| AAAGCAATGATTTCCCCAAA+AGG | + | chr3_3:70918668-70918687 | None:intergenic | 35.0% | |
| AAAAACTACGTGTAGGTGTT+GGG | + | chr3_3:70918866-70918885 | None:intergenic | 35.0% | |
| TGACGATATGCTTACTCAAA+TGG | - | chr3_3:70918984-70919003 | Msa0469170:intron | 35.0% | |
| GCAATTAGGGGAAAATGATA+TGG | - | chr3_3:70919138-70919157 | Msa0469170:intron | 35.0% | |
| TGATACAGATGAGAAGTCAA+TGG | - | chr3_3:70919165-70919184 | Msa0469170:intron | 35.0% | |
| AGAAGTCAATGGCTAAACTA+AGG | - | chr3_3:70919176-70919195 | Msa0469170:intron | 35.0% | |
| GATAATGCCTAAACCATATG+TGG | - | chr3_3:70919385-70919404 | Msa0469170:intron | 35.0% | |
| !! | TAAATTTTGACCGTCGTTGA+AGG | + | chr3_3:70919501-70919520 | None:intergenic | 35.0% |
| TATCGTATCTTCCAACTCAA+GGG | + | chr3_3:70919572-70919591 | None:intergenic | 35.0% | |
| TTATCGTATCTTCCAACTCA+AGG | + | chr3_3:70919573-70919592 | None:intergenic | 35.0% | |
| ATGAAAATTTGGGTAAGGTG+GGG | + | chr3_3:70919716-70919735 | None:intergenic | 35.0% | |
| CATGAAAATTTGGGTAAGGT+GGG | + | chr3_3:70919717-70919736 | None:intergenic | 35.0% | |
| CTGTGAACTAATCAACAAAC+GGG | + | chr3_3:70919842-70919861 | None:intergenic | 35.0% | |
| GAATATTTCTTTGCTGCATC+TGG | - | chr3_3:70919861-70919880 | Msa0469170:intron | 35.0% | |
| ! | GAAGTCTAAGATCGGAAAAA+CGG | + | chr3_3:70920482-70920501 | None:intergenic | 35.0% |
| ! | AACTTGTCGAAGTCTAAGAT+CGG | + | chr3_3:70920490-70920509 | None:intergenic | 35.0% |
| ! | TCCTCGTTTGATATTTTGTG+AGG | - | chr3_3:70920539-70920558 | Msa0469170:intron | 35.0% |
| ACCTCACAAAATATCAAACG+AGG | + | chr3_3:70920543-70920562 | None:intergenic | 35.0% | |
| GCTCATACGAATTAATCTTG+TGG | + | chr3_3:70920577-70920596 | None:intergenic | 35.0% | |
| ACAGAAGAGATAATGTTCAC+GGG | + | chr3_3:70920717-70920736 | None:intergenic | 35.0% | |
| CACAGAAGAGATAATGTTCA+CGG | + | chr3_3:70920718-70920737 | None:intergenic | 35.0% | |
| TTCTCTCATATCAAAACCGA+AGG | + | chr3_3:70920875-70920894 | None:intergenic | 35.0% | |
| !! | GTTAGAGGCATTGAAATTGT+GGG | - | chr3_3:70921101-70921120 | Msa0469170:intron | 35.0% |
| ! | TGTTGCAATTCTTTTAGCAG+AGG | - | chr3_3:70921220-70921239 | Msa0469170:intron | 35.0% |
| AAAAGCGATAGATCAATGCT+AGG | + | chr3_3:70921257-70921276 | None:intergenic | 35.0% | |
| TATAAAATCCGTTCGAACAC+AGG | - | chr3_3:70921286-70921305 | Msa0469170:intron | 35.0% | |
| CCTTGTATCCCTATAAATAG+GGG | + | chr3_3:70921512-70921531 | None:intergenic | 35.0% | |
| GCCTTGTATCCCTATAAATA+GGG | + | chr3_3:70921513-70921532 | None:intergenic | 35.0% | |
| CCAATTTACTTAGGATTAGG+AGG | + | chr3_3:70921537-70921556 | None:intergenic | 35.0% | |
| CCTCCTAATCCTAAGTAAAT+TGG | - | chr3_3:70921534-70921553 | Msa0469170:intron | 35.0% | |
| GTAATGTGAATCATGTACTG+TGG | - | chr3_3:70922151-70922170 | Msa0469170:intron | 35.0% | |
| ATGCCTGTACAAGAAAATGA+AGG | + | chr3_3:70922229-70922248 | None:intergenic | 35.0% | |
| CATAAGTAAGTTAACTGAGC+TGG | + | chr3_3:70922348-70922367 | None:intergenic | 35.0% | |
| CAACAAACAAATATGAGTGG+TGG | + | chr3_3:70922403-70922422 | None:intergenic | 35.0% | |
| TGGTATTCATTTGACAGCAT+AGG | + | chr3_3:70922430-70922449 | None:intergenic | 35.0% | |
| !!! | TATCCTATTTTTTCCCAGGA+TGG | - | chr3_3:70922460-70922479 | Msa0469170:intron | 35.0% |
| AGGAAGTTGTATGATATAGG+GGG | + | chr3_3:70922500-70922519 | None:intergenic | 35.0% | |
| GAGGAAGTTGTATGATATAG+GGG | + | chr3_3:70922501-70922520 | None:intergenic | 35.0% | |
| TAGTTTCTTTATTAGGACCG+AGG | + | chr3_3:70922535-70922554 | None:intergenic | 35.0% | |
| TGACGAATCAAAAGAGTCAT+AGG | + | chr3_3:70922574-70922593 | None:intergenic | 35.0% | |
| TAATCCAACAAAACTGTCGA+CGG | - | chr3_3:70922623-70922642 | Msa0469170:CDS | 35.0% | |
| ! | TTTCCCTGTGCTTATCTTTT+TGG | - | chr3_3:70922679-70922698 | Msa0469170:CDS | 35.0% |
| ATGCCAAAAAGATAAGCACA+GGG | + | chr3_3:70922685-70922704 | None:intergenic | 35.0% | |
| TATGCCAAAAAGATAAGCAC+AGG | + | chr3_3:70922686-70922705 | None:intergenic | 35.0% | |
| CTAAATCCCTCTTAATGGTT+TGG | + | chr3_3:70922733-70922752 | None:intergenic | 35.0% | |
| CTCTTAAGGAGTAGAAAAGT+CGG | - | chr3_3:70922871-70922890 | Msa0469170:intron | 35.0% | |
| GAAATAGTTGAGCGCATTAT+GGG | + | chr3_3:70922918-70922937 | None:intergenic | 35.0% | |
| AGAAATAGTTGAGCGCATTA+TGG | + | chr3_3:70922919-70922938 | None:intergenic | 35.0% | |
| AAAGGAGCAAAAATGTTCTG+GGG | + | chr3_3:70923158-70923177 | None:intergenic | 35.0% | |
| GAAAGGAGCAAAAATGTTCT+GGG | + | chr3_3:70923159-70923178 | None:intergenic | 35.0% | |
| GCACTGGATTAAAAAAGTGA+AGG | + | chr3_3:70923181-70923200 | None:intergenic | 35.0% | |
| TTATCTATGATTGCAGCGAA+TGG | - | chr3_3:70923206-70923225 | Msa0469170:intron | 35.0% | |
| TATCTATGATTGCAGCGAAT+GGG | - | chr3_3:70923207-70923226 | Msa0469170:intron | 35.0% | |
| ! | TATGGTTACATACACCGTTT+TGG | - | chr3_3:70923290-70923309 | Msa0469170:intron | 35.0% |
| !! | TATTTAATTTTCTGGGGAGC+TGG | - | chr3_3:70923337-70923356 | Msa0469170:CDS | 35.0% |
| !! | TTTTATTTGTAGAGCGGTCT+TGG | - | chr3_3:70923550-70923569 | Msa0469170:intron | 35.0% |
| ! | CAACGGACTTGATATTGAAT+CGG | - | chr3_3:70923629-70923648 | Msa0469170:intron | 35.0% |
| ! | AACGGACTTGATATTGAATC+GGG | - | chr3_3:70923630-70923649 | Msa0469170:intron | 35.0% |
| CTTAGACCTTGTATTTCTTC+AGG | - | chr3_3:70923780-70923799 | Msa0469170:intron | 35.0% | |
| ! | TGTCTCTTCATCCATAGTTT+TGG | + | chr3_3:70923872-70923891 | None:intergenic | 35.0% |
| AAACTATGGATGAAGAGACA+AGG | - | chr3_3:70923872-70923891 | Msa0469170:intron | 35.0% | |
| ! | AGAGTTTCAAGTCCAACATA+GGG | - | chr3_3:70924100-70924119 | Msa0469170:intron | 35.0% |
| ! | CCAAAAAGTTTTTACCCCTA+CGG | - | chr3_3:70924124-70924143 | Msa0469170:intron | 35.0% |
| TACAATGACGAGGATTAAGA+TGG | - | chr3_3:70924243-70924262 | Msa0469170:CDS | 35.0% | |
| TTTCATCTTTAGGCTGCAAT+GGG | + | chr3_3:70924417-70924436 | None:intergenic | 35.0% | |
| ! | TTTTCATCTTTAGGCTGCAA+TGG | + | chr3_3:70924418-70924437 | None:intergenic | 35.0% |
| CAGCCTAAAGATGAAAAGAT+AGG | - | chr3_3:70924421-70924440 | Msa0469170:five_prime_UTR | 35.0% | |
| ATGAAAAGATAGGCTACTAC+AGG | - | chr3_3:70924431-70924450 | Msa0469170:five_prime_UTR | 35.0% | |
| ACAAAGCTAAAGCAGCTATA+TGG | + | chr3_3:70924605-70924624 | None:intergenic | 35.0% | |
| !!! | CAATAAGTGCTTTTTTCCCC+CGG | - | chr3_3:70915303-70915322 | Msa0469170:three_prime_UTR | 40.0% |
| !! | CTCCAATTTTGACCTCTTCA+AGG | - | chr3_3:70915377-70915396 | Msa0469170:three_prime_UTR | 40.0% |
| TAATCGCGTTTGTGTGTGAA+AGG | - | chr3_3:70915484-70915503 | Msa0469170:three_prime_UTR | 40.0% | |
| AATCGCGTTTGTGTGTGAAA+GGG | - | chr3_3:70915485-70915504 | Msa0469170:three_prime_UTR | 40.0% | |
| AAAGGGAGAAAGAGAGATGT+GGG | - | chr3_3:70915502-70915521 | Msa0469170:three_prime_UTR | 40.0% | |
| TGGTGAGTTTGTCAGAATCA+CGG | + | chr3_3:70915859-70915878 | None:intergenic | 40.0% | |
| ! | CGGTGTTAAAGTCACTTATG+TGG | - | chr3_3:70916015-70916034 | Msa0469170:CDS | 40.0% |
| TTTAGGTCATTGGGTCATGA+GGG | + | chr3_3:70916074-70916093 | None:intergenic | 40.0% | |
| ATTTAGGTCATTGGGTCATG+AGG | + | chr3_3:70916075-70916094 | None:intergenic | 40.0% | |
| AAGCTGTCTGGTCCATTATA+AGG | + | chr3_3:70916254-70916273 | None:intergenic | 40.0% | |
| ! | TAAAAAGGCATGAAGCTGTC+TGG | + | chr3_3:70916266-70916285 | None:intergenic | 40.0% |
| !!! | TCTTTTGGAGCTGGTCATAT+TGG | - | chr3_3:70916554-70916573 | Msa0469170:CDS | 40.0% |
| AATTGGCATGCCTTTCTAGA+AGG | + | chr3_3:70916650-70916669 | None:intergenic | 40.0% | |
| AAACATGTGCAGCTCAGAAT+TGG | + | chr3_3:70916667-70916686 | None:intergenic | 40.0% | |
| ! | CTGAAGGTATGTTTGGGTTT+AGG | + | chr3_3:70916752-70916771 | None:intergenic | 40.0% |
| !!! | GAATCCTTGTTTTTAGTCGG+TGG | - | chr3_3:70916771-70916790 | Msa0469170:intron | 40.0% |
| !!! | TCAAGGTTTTGAAGATGCTG+GGG | - | chr3_3:70917191-70917210 | Msa0469170:intron | 40.0% |
| GACTAGTGTGCATGTTAACT+TGG | - | chr3_3:70917239-70917258 | Msa0469170:intron | 40.0% | |
| ACTTCCTACAGTATCCTCAA+TGG | - | chr3_3:70917456-70917475 | Msa0469170:intron | 40.0% | |
| GCATACTTTGTTACGATACG+AGG | - | chr3_3:70917515-70917534 | Msa0469170:CDS | 40.0% | |
| GATAAGAGGCTCAACACTAT+TGG | + | chr3_3:70917551-70917570 | None:intergenic | 40.0% | |
| !! | TTTCCAACTCGAGGGTATTT+GGG | + | chr3_3:70917634-70917653 | None:intergenic | 40.0% |
| TTCCTTACTTTCCAACTCGA+GGG | + | chr3_3:70917642-70917661 | None:intergenic | 40.0% | |
| TTTCCTTACTTTCCAACTCG+AGG | + | chr3_3:70917643-70917662 | None:intergenic | 40.0% | |
| ATTGGATTGATGCAAGGGAA+AGG | + | chr3_3:70917761-70917780 | None:intergenic | 40.0% | |
| ! | GATACTTTTGTAAGCAGGAG+TGG | - | chr3_3:70918074-70918093 | Msa0469170:intron | 40.0% |
| AAGTCATGGCAAATCCCATA+AGG | + | chr3_3:70918103-70918122 | None:intergenic | 40.0% | |
| GTTACTGGTGCATTTCTTCT+TGG | - | chr3_3:70918143-70918162 | Msa0469170:intron | 40.0% | |
| ! | GCATTTCTCCAGATGCTTTT+AGG | + | chr3_3:70918188-70918207 | None:intergenic | 40.0% |
| TTCCCACAAAATTGCCCAAA+TGG | - | chr3_3:70918235-70918254 | Msa0469170:intron | 40.0% | |
| ! | AGCCATTTGGGCAATTTTGT+GGG | + | chr3_3:70918240-70918259 | None:intergenic | 40.0% |
| ATCCAGTTTGACAGCCATTT+GGG | + | chr3_3:70918252-70918271 | None:intergenic | 40.0% | |
| GCCATATAAACAAGAACAGG+TGG | + | chr3_3:70918456-70918475 | None:intergenic | 40.0% | |
| GAACTTGAAATGAAGCCAAC+TGG | + | chr3_3:70918521-70918540 | None:intergenic | 40.0% | |
| ! | GCTTTTGACCAGTGTATTGT+TGG | - | chr3_3:70918683-70918702 | Msa0469170:CDS | 40.0% |
| TTTGACCAGTGTATTGTTGG+CGG | - | chr3_3:70918686-70918705 | Msa0469170:CDS | 40.0% | |
| ! | TTTTACCGCCAACAATACAC+TGG | + | chr3_3:70918694-70918713 | None:intergenic | 40.0% |
| GCGGTAAAAGCAATGCAAAT+TGG | - | chr3_3:70918705-70918724 | Msa0469170:CDS | 40.0% | |
| ! | AAAACTACGTGTAGGTGTTG+GGG | + | chr3_3:70918865-70918884 | None:intergenic | 40.0% |
| CAAAAACTACGTGTAGGTGT+TGG | + | chr3_3:70918867-70918886 | None:intergenic | 40.0% | |
| ! | CAACACCTACACGTAGTTTT+TGG | - | chr3_3:70918865-70918884 | Msa0469170:intron | 40.0% |
| AAGCTCCAAAAACTACGTGT+AGG | + | chr3_3:70918873-70918892 | None:intergenic | 40.0% | |
| GATCCTTCATTCAAACCACA+AGG | - | chr3_3:70919112-70919131 | Msa0469170:intron | 40.0% | |
| ! | CTAAACTAAGGCGTCATCTT+CGG | - | chr3_3:70919188-70919207 | Msa0469170:intron | 40.0% |
| CCATAGATTTCCTTCAACGA+CGG | - | chr3_3:70919488-70919507 | Msa0469170:intron | 40.0% | |
| TGAAAATTTGGGTAAGGTGG+GGG | + | chr3_3:70919715-70919734 | None:intergenic | 40.0% | |
| GCATGAAAATTTGGGTAAGG+TGG | + | chr3_3:70919718-70919737 | None:intergenic | 40.0% | |
| ATTCAAGCATCAGACCTGTT+CGG | - | chr3_3:70919757-70919776 | Msa0469170:intron | 40.0% | |
| TTACACCAAATCTCCACTGT+CGG | - | chr3_3:70919957-70919976 | Msa0469170:intron | 40.0% | |
| GTCGGAACTAATTGATCCTA+AGG | - | chr3_3:70919975-70919994 | Msa0469170:intron | 40.0% | |
| ! | AGGGGGAGTGTAAAATAGAT+AGG | + | chr3_3:70920441-70920460 | None:intergenic | 40.0% |
| ACTTCGACAAGTTCAAGAAG+AGG | - | chr3_3:70920497-70920516 | Msa0469170:intron | 40.0% | |
| TATATATGAGTCAGGATCCG+TGG | + | chr3_3:70920642-70920661 | None:intergenic | 40.0% | |
| TCTCATATCAAAACCGAAGG+AGG | + | chr3_3:70920872-70920891 | None:intergenic | 40.0% | |
| !! | GGTTAGAGGCATTGAAATTG+TGG | - | chr3_3:70921100-70921119 | Msa0469170:intron | 40.0% |
| ! | GAAACAAGTTGAGAAAGGCA+TGG | - | chr3_3:70921175-70921194 | Msa0469170:intron | 40.0% |
| !! | AAAGGCATGGCTGTTTTACT+TGG | - | chr3_3:70921188-70921207 | Msa0469170:intron | 40.0% |
| CCCCTATTTATAGGGATACA+AGG | - | chr3_3:70921509-70921528 | Msa0469170:intron | 40.0% | |
| ! | GGCCTTGTATCCCTATAAAT+AGG | + | chr3_3:70921514-70921533 | None:intergenic | 40.0% |
| ! | AGGGAGTATATTGGATAGGA+TGG | + | chr3_3:70921727-70921746 | None:intergenic | 40.0% |
| !!! | TGCTTATATTTTGGGACGGA+GGG | + | chr3_3:70921746-70921765 | None:intergenic | 40.0% |
| !!! | TTGCTTATATTTTGGGACGG+AGG | + | chr3_3:70921747-70921766 | None:intergenic | 40.0% |
| !! | AGATGGGCTTTGTTAGTGTT+TGG | - | chr3_3:70921818-70921837 | Msa0469170:intron | 40.0% |
| !! | GATGGGCTTTGTTAGTGTTT+GGG | - | chr3_3:70921819-70921838 | Msa0469170:intron | 40.0% |
| !!! | CTTACTTCCCTTTTGGCTTA+GGG | - | chr3_3:70921906-70921925 | Msa0469170:intron | 40.0% |
| TGTACATCCCTAAGCCAAAA+GGG | + | chr3_3:70921916-70921935 | None:intergenic | 40.0% | |
| ATGTACATCCCTAAGCCAAA+AGG | + | chr3_3:70921917-70921936 | None:intergenic | 40.0% | |
| CAGATGCACATGTACATAAG+TGG | + | chr3_3:70922263-70922282 | None:intergenic | 40.0% | |
| !! | TTAACTGAGCTGGTTTGTCT+GGG | + | chr3_3:70922338-70922357 | None:intergenic | 40.0% |
| CAACCATCCTGGGAAAAAAT+AGG | + | chr3_3:70922466-70922485 | None:intergenic | 40.0% | |
| ! | ATGATATAGGGGGTGCATAA+CGG | + | chr3_3:70922490-70922509 | None:intergenic | 40.0% |
| TCACAGCAGACAGTAATACA+TGG | + | chr3_3:70922657-70922676 | None:intergenic | 40.0% | |
| GTTTGGCACAACTTCTCTTA+AGG | - | chr3_3:70922857-70922876 | Msa0469170:intron | 40.0% | |
| TAGAAAAGTCGGCAATAAGC+TGG | - | chr3_3:70922882-70922901 | Msa0469170:intron | 40.0% | |
| AGAAAAGTCGGCAATAAGCT+GGG | - | chr3_3:70922883-70922902 | Msa0469170:intron | 40.0% | |
| GGAAAGGAGCAAAAATGTTC+TGG | + | chr3_3:70923160-70923179 | None:intergenic | 40.0% | |
| ATCTATGATTGCAGCGAATG+GGG | - | chr3_3:70923208-70923227 | Msa0469170:intron | 40.0% | |
| GAAGTTGCTTGCAACCAAAA+CGG | + | chr3_3:70923307-70923326 | None:intergenic | 40.0% | |
| CAAAACTGAAGCAGAGGATA+TGG | - | chr3_3:70923374-70923393 | Msa0469170:intron | 40.0% | |
| CCACTTGCAAGGAATTTCAA+CGG | - | chr3_3:70923612-70923631 | Msa0469170:intron | 40.0% | |
| TGAATCGGGTAACAACTATG+TGG | - | chr3_3:70923644-70923663 | Msa0469170:intron | 40.0% | |
| CTGCAGCTAAAGAATCCATT+AGG | + | chr3_3:70923708-70923727 | None:intergenic | 40.0% | |
| TAGCTGCAGTGTATGACATT+TGG | - | chr3_3:70923719-70923738 | Msa0469170:intron | 40.0% | |
| ACCTTGTATTTCTTCAGGAG+AGG | - | chr3_3:70923785-70923804 | Msa0469170:intron | 40.0% | |
| TCCTCTCCTGAAGAAATACA+AGG | + | chr3_3:70923789-70923808 | None:intergenic | 40.0% | |
| GTATTTCTTCAGGAGAGGAA+CGG | - | chr3_3:70923790-70923809 | Msa0469170:intron | 40.0% | |
| ATTACTGAAGAAGTGAACGG+AGG | - | chr3_3:70923841-70923860 | Msa0469170:intron | 40.0% | |
| ! | CGGAGGTATATCCAAAACTA+TGG | - | chr3_3:70923858-70923877 | Msa0469170:intron | 40.0% |
| GATGAAGAGACAAGGAGATA+TGG | - | chr3_3:70923880-70923899 | Msa0469170:intron | 40.0% | |
| TTCATCAAGCGCAGAATAAG+AGG | + | chr3_3:70923998-70924017 | None:intergenic | 40.0% | |
| TCTTATTCTGCGCTTGATGA+AGG | - | chr3_3:70923997-70924016 | Msa0469170:intron | 40.0% | |
| ACATGGCAAACAATGAAGAC+AGG | - | chr3_3:70924072-70924091 | Msa0469170:intron | 40.0% | |
| ! | CAGAGTTTCAAGTCCAACAT+AGG | - | chr3_3:70924099-70924118 | Msa0469170:intron | 40.0% |
| ! | GAGTTTCAAGTCCAACATAG+GGG | - | chr3_3:70924101-70924120 | Msa0469170:intron | 40.0% |
| !! | AAACTTTTTGGCCCCTATGT+TGG | + | chr3_3:70924115-70924134 | None:intergenic | 40.0% |
| ! | CCGTAGGGGTAAAAACTTTT+TGG | + | chr3_3:70924127-70924146 | None:intergenic | 40.0% |
| ! | ATTTTCCTGTGTTTGCCGTA+GGG | + | chr3_3:70924142-70924161 | None:intergenic | 40.0% |
| ! | TATTTTCCTGTGTTTGCCGT+AGG | + | chr3_3:70924143-70924162 | None:intergenic | 40.0% |
| ACGGCAAACACAGGAAAATA+CGG | - | chr3_3:70924143-70924162 | Msa0469170:intron | 40.0% | |
| CCTCGTCATTGTAAGTAACT+TGG | + | chr3_3:70924236-70924255 | None:intergenic | 40.0% | |
| CCAAGTTACTTACAATGACG+AGG | - | chr3_3:70924233-70924252 | Msa0469170:CDS | 40.0% | |
| TCAAAAAGGACTACAAGCAC+CGG | + | chr3_3:70924272-70924291 | None:intergenic | 40.0% | |
| ! | ATCATTTGGCAAGAGCATAC+AGG | - | chr3_3:70924300-70924319 | Msa0469170:CDS | 40.0% |
| ! | AAACAATGTTTTGCCTGGCT+TGG | - | chr3_3:70924656-70924675 | Msa0469170:five_prime_UTR | 40.0% |
| CGCCTTGAAGAGGTCAAAAT+TGG | + | chr3_3:70915382-70915401 | None:intergenic | 45.0% | |
| GAAAGGGAGAAAGAGAGATG+TGG | - | chr3_3:70915501-70915520 | Msa0469170:three_prime_UTR | 45.0% | |
| TTGTTAGAGGAAGCGAGATC+AGG | + | chr3_3:70915535-70915554 | None:intergenic | 45.0% | |
| GATCTCGCTTCCTCTAACAA+CGG | - | chr3_3:70915535-70915554 | Msa0469170:three_prime_UTR | 45.0% | |
| ATCTCGCTTCCTCTAACAAC+GGG | - | chr3_3:70915536-70915555 | Msa0469170:three_prime_UTR | 45.0% | |
| ! | GAATGGTGCTTTTCACGTTG+AGG | - | chr3_3:70915558-70915577 | Msa0469170:three_prime_UTR | 45.0% |
| AGCACGTATCTAGGAACATC+TGG | + | chr3_3:70915596-70915615 | None:intergenic | 45.0% | |
| ! | ACGGTGAAAAGCACGTATCT+AGG | + | chr3_3:70915605-70915624 | None:intergenic | 45.0% |
| ! | AGATACGTGCTTTTCACCGT+TGG | - | chr3_3:70915605-70915624 | Msa0469170:three_prime_UTR | 45.0% |
| AGCAGGGACGAGAATGATAA+TGG | + | chr3_3:70915654-70915673 | None:intergenic | 45.0% | |
| TTCTCGTCCCTGCTGATATT+TGG | - | chr3_3:70915660-70915679 | Msa0469170:CDS | 45.0% | |
| TCTCGTCCCTGCTGATATTT+GGG | - | chr3_3:70915661-70915680 | Msa0469170:CDS | 45.0% | |
| TGAGTTTGTCAGAATCACGG+TGG | + | chr3_3:70915856-70915875 | None:intergenic | 45.0% | |
| ! | TGGTTGCTATTGACCCAATG+TGG | - | chr3_3:70916035-70916054 | Msa0469170:CDS | 45.0% |
| TTGTAAGGGGCTTGTGTACA+TGG | - | chr3_3:70916097-70916116 | Msa0469170:intron | 45.0% | |
| CTGTCTGGTCCATTATAAGG+AGG | + | chr3_3:70916251-70916270 | None:intergenic | 45.0% | |
| GCTTCTCACAATGAGAATGG+AGG | - | chr3_3:70916523-70916542 | Msa0469170:CDS | 45.0% | |
| !! | TGTTTGGGTTTAGGGCATTG+AGG | + | chr3_3:70916743-70916762 | None:intergenic | 45.0% |
| ! | CAGTCCACCGACTAAAAACA+AGG | + | chr3_3:70916778-70916797 | None:intergenic | 45.0% |
| ! | TATTTTCCTAAGCAGGGCTG+TGG | - | chr3_3:70917158-70917177 | Msa0469170:intron | 45.0% |
| !!! | GTGGGATCCATTGGTCTTTT+CGG | - | chr3_3:70917276-70917295 | Msa0469170:intron | 45.0% |
| TCATTATGATGCACAGGACC+TGG | - | chr3_3:70917310-70917329 | Msa0469170:intron | 45.0% | |
| TAGGAGGATGAGAACAAACC+AGG | + | chr3_3:70917331-70917350 | None:intergenic | 45.0% | |
| ! | TGTGCCATTGAGGATACTGT+AGG | + | chr3_3:70917463-70917482 | None:intergenic | 45.0% |
| !! | TTCCAACTCGAGGGTATTTG+GGG | + | chr3_3:70917633-70917652 | None:intergenic | 45.0% |
| !! | CTTTCCAACTCGAGGGTATT+TGG | + | chr3_3:70917635-70917654 | None:intergenic | 45.0% |
| !! | TACCCTCGAGTTGGAAAGTA+AGG | - | chr3_3:70917637-70917656 | Msa0469170:intron | 45.0% |
| AAGTGTGAGAACTAGGCTCA+TGG | - | chr3_3:70917807-70917826 | Msa0469170:intron | 45.0% | |
| AGTGTGAGAACTAGGCTCAT+GGG | - | chr3_3:70917808-70917827 | Msa0469170:intron | 45.0% | |
| GGTGCATTTCTTCTTGGCTT+TGG | - | chr3_3:70918149-70918168 | Msa0469170:intron | 45.0% | |
| GCATCTGGAGAAATGCTGAT+TGG | - | chr3_3:70918192-70918211 | Msa0469170:intron | 45.0% | |
| TGTGGGAAAGAACTTTCTGG+CGG | + | chr3_3:70918223-70918242 | None:intergenic | 45.0% | |
| ! | CAGCCATTTGGGCAATTTTG+TGG | + | chr3_3:70918241-70918260 | None:intergenic | 45.0% |
| CATCCAGTTTGACAGCCATT+TGG | + | chr3_3:70918253-70918272 | None:intergenic | 45.0% | |
| CAAATGTCACTCACTGACAC+TGG | + | chr3_3:70918615-70918634 | None:intergenic | 45.0% | |
| !! | AAACTACGTGTAGGTGTTGG+GGG | + | chr3_3:70918864-70918883 | None:intergenic | 45.0% |
| CATCTGCTTGGAAGTTGCTT+GGG | + | chr3_3:70918926-70918945 | None:intergenic | 45.0% | |
| ACATCTGCTTGGAAGTTGCT+TGG | + | chr3_3:70918927-70918946 | None:intergenic | 45.0% | |
| CCTTCATTCAAACCACAAGG+CGG | - | chr3_3:70919115-70919134 | Msa0469170:intron | 45.0% | |
| CTTCATTCAAACCACAAGGC+GGG | - | chr3_3:70919116-70919135 | Msa0469170:intron | 45.0% | |
| CCGTCGTTGAAGGAAATCTA+TGG | + | chr3_3:70919491-70919510 | None:intergenic | 45.0% | |
| !! | CAAACCATCCAGTTGACTTG+CGG | + | chr3_3:70919609-70919628 | None:intergenic | 45.0% |
| GCACTTACACCTAGTGTCAA+CGG | + | chr3_3:70919931-70919950 | None:intergenic | 45.0% | |
| TAGTTCCGACAGTGGAGATT+TGG | + | chr3_3:70919965-70919984 | None:intergenic | 45.0% | |
| GGATCAATTAGTTCCGACAG+TGG | + | chr3_3:70919973-70919992 | None:intergenic | 45.0% | |
| GTTGGGATATTACGAGCCTT+AGG | + | chr3_3:70919994-70920013 | None:intergenic | 45.0% | |
| CTCTGTTCACCTTTCTTCTC+CGG | - | chr3_3:70920083-70920102 | Msa0469170:CDS | 45.0% | |
| !! | AAAACAACGAAAGTGCCGAC+CGG | + | chr3_3:70920105-70920124 | None:intergenic | 45.0% |
| GCATTAATCTGGGGACCAAT+TGG | - | chr3_3:70920155-70920174 | Msa0469170:intron | 45.0% | |
| TCGTATGAGCGGTTGAGATT+TGG | - | chr3_3:70920587-70920606 | Msa0469170:intron | 45.0% | |
| TAACTTACACCTGGTGTCCA+CGG | - | chr3_3:70920622-70920641 | Msa0469170:intron | 45.0% | |
| AAGTAGCTCCTGTGTTCGAA+CGG | + | chr3_3:70921297-70921316 | None:intergenic | 45.0% | |
| ! | ACGGAGGGAGTATATTGGAT+AGG | + | chr3_3:70921731-70921750 | None:intergenic | 45.0% |
| !!! | GCTTACTTCCCTTTTGGCTT+AGG | - | chr3_3:70921905-70921924 | Msa0469170:intron | 45.0% |
| !! | GTTAACTGAGCTGGTTTGTC+TGG | + | chr3_3:70922339-70922358 | None:intergenic | 45.0% |
| ! | TGATATAGGGGGTGCATAAC+GGG | + | chr3_3:70922489-70922508 | None:intergenic | 45.0% |
| TTCCTCAATCTCATTCGCCT+CGG | - | chr3_3:70922515-70922534 | Msa0469170:intron | 45.0% | |
| !! | ACATCCGTCGACAGTTTTGT+TGG | + | chr3_3:70922630-70922649 | None:intergenic | 45.0% |
| ! | TGAAGAAAGCACACTAGGCA+AGG | + | chr3_3:70922831-70922850 | None:intergenic | 45.0% |
| ! | ACAACGCCGTCCCTTTATTT+GGG | - | chr3_3:70923238-70923257 | Msa0469170:intron | 45.0% |
| CTTGTCCCCAAATAAAGGGA+CGG | + | chr3_3:70923247-70923266 | None:intergenic | 45.0% | |
| ACTGAAGCAGAGGATATGGA+TGG | - | chr3_3:70923378-70923397 | Msa0469170:intron | 45.0% | |
| AGCAGAGGATATGGATGGTT+TGG | - | chr3_3:70923383-70923402 | Msa0469170:intron | 45.0% | |
| ! | ATGGATGGTTTGGATCCATC+CGG | - | chr3_3:70923393-70923412 | Msa0469170:intron | 45.0% |
| ! | CTTGAACAAGGGCGCAAAAT+CGG | - | chr3_3:70923573-70923592 | Msa0469170:intron | 45.0% |
| ! | TTGAACAAGGGCGCAAAATC+GGG | - | chr3_3:70923574-70923593 | Msa0469170:intron | 45.0% |
| CCGTTGAAATTCCTTGCAAG+TGG | + | chr3_3:70923615-70923634 | None:intergenic | 45.0% | |
| AGCAAGTACGCTGCAATTAG+AGG | - | chr3_3:70923925-70923944 | Msa0469170:intron | 45.0% | |
| GCAAGTACGCTGCAATTAGA+GGG | - | chr3_3:70923926-70923945 | Msa0469170:intron | 45.0% | |
| ! | TTTTCCTGTGTTTGCCGTAG+GGG | + | chr3_3:70924141-70924160 | None:intergenic | 45.0% |
| AGGAAAATACGGTCTCTCGT+GGG | - | chr3_3:70924154-70924173 | Msa0469170:intron | 45.0% | |
| ACGAGGATTAAGATGGAAGC+CGG | - | chr3_3:70924250-70924269 | Msa0469170:CDS | 45.0% | |
| GAACCATGTTCCCATAGAGT+CGG | + | chr3_3:70924542-70924561 | None:intergenic | 45.0% | |
| !! | AAGAAAAATAATATTTAAAA+TGG | + | chr3_3:70922600-70922619 | None:intergenic | 5.0% |
| !!! | AGTTTGTTGCCACCGCGTTT+TGG | + | chr3_3:70915332-70915351 | None:intergenic | 50.0% |
| GCTTCCTCTAACAACGGGAA+TGG | - | chr3_3:70915541-70915560 | Msa0469170:three_prime_UTR | 50.0% | |
| AGCACCATTCCCGTTGTTAG+AGG | + | chr3_3:70915548-70915567 | None:intergenic | 50.0% | |
| ! | TTCACGTTGAGGTACTTCGC+TGG | - | chr3_3:70915569-70915588 | Msa0469170:three_prime_UTR | 50.0% |
| GTACCGCCCAAATATCAGCA+GGG | + | chr3_3:70915670-70915689 | None:intergenic | 50.0% | |
| AGTACCGCCCAAATATCAGC+AGG | + | chr3_3:70915671-70915690 | None:intergenic | 50.0% | |
| AGCCTGACGATCACCACATT+GGG | + | chr3_3:70916051-70916070 | None:intergenic | 50.0% | |
| !! | TCCAACTCGAGGGTATTTGG+GGG | + | chr3_3:70917632-70917651 | None:intergenic | 50.0% |
| ! | GTGGGAAAGAACTTTCTGGC+GGG | + | chr3_3:70918222-70918241 | None:intergenic | 50.0% |
| TGCCCAAATGGCTGTCAAAC+TGG | - | chr3_3:70918247-70918266 | Msa0469170:intron | 50.0% | |
| !! | AACTACGTGTAGGTGTTGGG+GGG | + | chr3_3:70918863-70918882 | None:intergenic | 50.0% |
| CTTCCAAGCAGATGTCCAAG+CGG | - | chr3_3:70918932-70918951 | Msa0469170:intron | 50.0% | |
| TTCCAAGCAGATGTCCAAGC+GGG | - | chr3_3:70918933-70918952 | Msa0469170:intron | 50.0% | |
| CCGCCTTGTGGTTTGAATGA+AGG | + | chr3_3:70919118-70919137 | None:intergenic | 50.0% | |
| AAACCACAAGGCGGGCAATT+AGG | - | chr3_3:70919124-70919143 | Msa0469170:intron | 50.0% | |
| AACCACAAGGCGGGCAATTA+GGG | - | chr3_3:70919125-70919144 | Msa0469170:intron | 50.0% | |
| TCATCTTCGGAATGCTCGTG+AGG | - | chr3_3:70919201-70919220 | Msa0469170:intron | 50.0% | |
| TGTACTGGAAGCCCTTGAGT+TGG | - | chr3_3:70919558-70919577 | Msa0469170:intron | 50.0% | |
| TATGAACGCCGCAAGTCAAC+TGG | - | chr3_3:70919598-70919617 | Msa0469170:intron | 50.0% | |
| AGTCAGGATCCGTTGACACT+AGG | - | chr3_3:70919919-70919938 | Msa0469170:intron | 50.0% | |
| GTTCACCTTTCTTCTCCGGT+CGG | - | chr3_3:70920087-70920106 | Msa0469170:CDS | 50.0% | |
| AACACAGGAGCTACTTGTGC+AGG | - | chr3_3:70921301-70921320 | Msa0469170:intron | 50.0% | |
| ! | TTGGGACGGAGGGAGTATAT+TGG | + | chr3_3:70921736-70921755 | None:intergenic | 50.0% |
| ! | GAAAGCACACTAGGCAAGGT+TGG | + | chr3_3:70922827-70922846 | None:intergenic | 50.0% |
| !! | GAGCGCATTATGGGAGTGTT+TGG | + | chr3_3:70922909-70922928 | None:intergenic | 50.0% |
| GACAACGCCGTCCCTTTATT+TGG | - | chr3_3:70923237-70923256 | Msa0469170:intron | 50.0% | |
| ! | CAACGCCGTCCCTTTATTTG+GGG | - | chr3_3:70923239-70923258 | Msa0469170:intron | 50.0% |
| ! | AGCGGTCTTGGCTTGAACAA+GGG | - | chr3_3:70923562-70923581 | Msa0469170:intron | 50.0% |
| ! | TGAACAAGGGCGCAAAATCG+GGG | - | chr3_3:70923575-70923594 | Msa0469170:intron | 50.0% |
| AGCAGGTTGTTCCACTTGCA+AGG | - | chr3_3:70923601-70923620 | Msa0469170:intron | 50.0% | |
| ! | TGCAGCGTACTTGCTGCTTA+TGG | + | chr3_3:70923920-70923939 | None:intergenic | 50.0% |
| TACGCTGCAATTAGAGGGCA+GGG | - | chr3_3:70923931-70923950 | Msa0469170:intron | 50.0% | |
| ! | TTCAGCTGGAGCACCATCTT+CGG | - | chr3_3:70924038-70924057 | Msa0469170:intron | 50.0% |
| TTTACCCCTACGGCAAACAC+AGG | - | chr3_3:70924134-70924153 | Msa0469170:intron | 50.0% | |
| CAGGAAAATACGGTCTCTCG+TGG | - | chr3_3:70924153-70924172 | Msa0469170:intron | 50.0% | |
| CTCATCAAGTGACTCAGACG+AGG | + | chr3_3:70924181-70924200 | None:intergenic | 50.0% | |
| TTCCCCCGGAAACCAAAACG+CGG | - | chr3_3:70915317-70915336 | Msa0469170:three_prime_UTR | 55.0% | |
| !!! | TGCCACCGCGTTTTGGTTTC+CGG | + | chr3_3:70915325-70915344 | None:intergenic | 55.0% |
| CGTCCCTGCTGATATTTGGG+CGG | - | chr3_3:70915664-70915683 | Msa0469170:CDS | 55.0% | |
| GACCCAATGTGGTGATCGTC+AGG | - | chr3_3:70916046-70916065 | Msa0469170:CDS | 55.0% | |
| GAGCCTGACGATCACCACAT+TGG | + | chr3_3:70916052-70916071 | None:intergenic | 55.0% | |
| GCTGTGGCACCCCTTATTCA+AGG | - | chr3_3:70917174-70917193 | Msa0469170:intron | 55.0% | |
| ! | TGTCTGCACGTGTGCCATTG+AGG | + | chr3_3:70917473-70917492 | None:intergenic | 55.0% |
| TCCCCCAAATACCCTCGAGT+TGG | - | chr3_3:70917628-70917647 | Msa0469170:intron | 55.0% | |
| AAGCAGGAGTGGGAGCCTTA+TGG | - | chr3_3:70918085-70918104 | Msa0469170:intron | 55.0% | |
| ! | AGCAGGAGTGGGAGCCTTAT+GGG | - | chr3_3:70918086-70918105 | Msa0469170:intron | 55.0% |
| ATCCCGCTTGGACATCTGCT+TGG | + | chr3_3:70918938-70918957 | None:intergenic | 55.0% | |
| AGGTCTCAAAGGATCCCGCT+TGG | + | chr3_3:70918950-70918969 | None:intergenic | 55.0% | |
| ACCACAAGGCGGGCAATTAG+GGG | - | chr3_3:70919126-70919145 | Msa0469170:intron | 55.0% | |
| AACGCCGCAAGTCAACTGGA+TGG | - | chr3_3:70919602-70919621 | Msa0469170:intron | 55.0% | |
| AGCATCAGACCTGTTCGGAC+TGG | - | chr3_3:70919762-70919781 | Msa0469170:intron | 55.0% | |
| !! | ACCTGTTCGGACTGGCAAGT+TGG | - | chr3_3:70919770-70919789 | Msa0469170:intron | 55.0% |
| !! | CCTGTTCGGACTGGCAAGTT+GGG | - | chr3_3:70919771-70919790 | Msa0469170:intron | 55.0% |
| !! | AAGTGCCGACCGGAGAAGAA+AGG | + | chr3_3:70920095-70920114 | None:intergenic | 55.0% |
| !! | GCATAACGGGCAACCATCCT+GGG | + | chr3_3:70922476-70922495 | None:intergenic | 55.0% |
| !! | TGCATAACGGGCAACCATCC+TGG | + | chr3_3:70922477-70922496 | None:intergenic | 55.0% |
| GACCGAGGCGAATGAGATTG+AGG | + | chr3_3:70922520-70922539 | None:intergenic | 55.0% | |
| ! | GAGCGGTCTTGGCTTGAACA+AGG | - | chr3_3:70923561-70923580 | Msa0469170:intron | 55.0% |
| GTACGCTGCAATTAGAGGGC+AGG | - | chr3_3:70923930-70923949 | Msa0469170:intron | 55.0% | |
| CTGCAATTAGAGGGCAGGGT+GGG | - | chr3_3:70923935-70923954 | Msa0469170:intron | 55.0% | |
| ! | TCAGCTGGAGCACCATCTTC+GGG | - | chr3_3:70924039-70924058 | Msa0469170:intron | 55.0% |
| ! | TGGAGCACCATCTTCGGGTT+TGG | - | chr3_3:70924044-70924063 | Msa0469170:intron | 55.0% |
| GTCGAAGCCAAACCCGAAGA+TGG | + | chr3_3:70924054-70924073 | None:intergenic | 55.0% | |
| ! | CTTCGGGTTTGGCTTCGACA+TGG | - | chr3_3:70924055-70924074 | Msa0469170:intron | 55.0% |
| !! | TGACCTTTCCGCCGACTCTA+TGG | - | chr3_3:70924528-70924547 | Msa0469170:five_prime_UTR | 55.0% |
| !! | GACCTTTCCGCCGACTCTAT+GGG | - | chr3_3:70924529-70924548 | Msa0469170:five_prime_UTR | 55.0% |
| TTCCCATAGAGTCGGCGGAA+AGG | + | chr3_3:70924534-70924553 | None:intergenic | 55.0% | |
| CCATGTTCCCATAGAGTCGG+CGG | + | chr3_3:70924539-70924558 | None:intergenic | 55.0% | |
| !!! | CACCGCGTTTTGGTTTCCGG+GGG | + | chr3_3:70915322-70915341 | None:intergenic | 60.0% |
| !!! | CCACCGCGTTTTGGTTTCCG+GGG | + | chr3_3:70915323-70915342 | None:intergenic | 60.0% |
| !!! | GCCACCGCGTTTTGGTTTCC+GGG | + | chr3_3:70915324-70915343 | None:intergenic | 60.0% |
| TCCCCTAATTGCCCGCCTTG+TGG | + | chr3_3:70919130-70919149 | None:intergenic | 60.0% | |
| CCCAACTTGCCAGTCCGAAC+AGG | + | chr3_3:70919774-70919793 | None:intergenic | 60.0% | |
| CACCATCATCTGCTGCGAGG+GGG | + | chr3_3:70920458-70920477 | None:intergenic | 60.0% | |
| CCACCATCATCTGCTGCGAG+GGG | + | chr3_3:70920459-70920478 | None:intergenic | 60.0% | |
| GCCACCATCATCTGCTGCGA+GGG | + | chr3_3:70920460-70920479 | None:intergenic | 60.0% | |
| AGTCAGGATCCGTGGACACC+AGG | + | chr3_3:70920634-70920653 | None:intergenic | 60.0% | |
| GCGCAAAATCGGGGAAGAGC+AGG | - | chr3_3:70923584-70923603 | Msa0469170:intron | 60.0% | |
| GCTGCAATTAGAGGGCAGGG+TGG | - | chr3_3:70923934-70923953 | Msa0469170:intron | 60.0% | |
| !! | CCGCCGACTCTATGGGAACA+TGG | - | chr3_3:70924536-70924555 | Msa0469170:five_prime_UTR | 60.0% |
| CCCCGGAAACCAAAACGCGG+TGG | - | chr3_3:70915320-70915339 | Msa0469170:three_prime_UTR | 65.0% | |
| CCTCTTGGCGCGCCTTGAAG+AGG | + | chr3_3:70915392-70915411 | None:intergenic | 65.0% | |
| CCTCTTCAAGGCGCGCCAAG+AGG | - | chr3_3:70915389-70915408 | Msa0469170:three_prime_UTR | 65.0% | |
| CTTCAAGGCGCGCCAAGAGG+TGG | - | chr3_3:70915392-70915411 | Msa0469170:three_prime_UTR | 65.0% | |
| CTCGCATCAGCGCCACCTCT+TGG | + | chr3_3:70915407-70915426 | None:intergenic | 65.0% | |
| !! | ACGTGTAGGTGTTGGGGGGC+AGG | + | chr3_3:70918859-70918878 | None:intergenic | 65.0% |
| CTCCCCCTCGCAGCAGATGA+TGG | - | chr3_3:70920453-70920472 | Msa0469170:intron | 65.0% | |
| ! | CCCCTCGCAGCAGATGATGG+TGG | - | chr3_3:70920456-70920475 | Msa0469170:intron | 65.0% |
| GGCCACCATCATCTGCTGCG+AGG | + | chr3_3:70920461-70920480 | None:intergenic | 65.0% | |
| ! | GGGGTGCCACAGCCCTGCTT+AGG | + | chr3_3:70917167-70917186 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 70915206 | 70924684 | 70915206 | ID=Msa0469170;Name=Msa0469170 |
| chr3_3 | mRNA | 70915206 | 70924684 | 70915206 | ID=Msa0469170-mRNA-1;Parent=Msa0469170;Name=Msa0469170-mRNA-1;_AED=0.08;_eAED=0.08;_QI=312|1|1|1|1|1|14|424|720 |
| chr3_3 | exon | 70915206 | 70916088 | 70915206 | ID=Msa0469170-mRNA-1:exon:17369;Parent=Msa0469170-mRNA-1 |
| chr3_3 | exon | 70916225 | 70916328 | 70916225 | ID=Msa0469170-mRNA-1:exon:17368;Parent=Msa0469170-mRNA-1 |
| chr3_3 | exon | 70916455 | 70916668 | 70916455 | ID=Msa0469170-mRNA-1:exon:17367;Parent=Msa0469170-mRNA-1 |
| chr3_3 | exon | 70917325 | 70917412 | 70917325 | ID=Msa0469170-mRNA-1:exon:17366;Parent=Msa0469170-mRNA-1 |
| chr3_3 | exon | 70917515 | 70917645 | 70917515 | ID=Msa0469170-mRNA-1:exon:17365;Parent=Msa0469170-mRNA-1 |
| chr3_3 | exon | 70918568 | 70918740 | 70918568 | ID=Msa0469170-mRNA-1:exon:17364;Parent=Msa0469170-mRNA-1 |
| chr3_3 | exon | 70920077 | 70920141 | 70920077 | ID=Msa0469170-mRNA-1:exon:17363;Parent=Msa0469170-mRNA-1 |
| chr3_3 | exon | 70920267 | 70920347 | 70920267 | ID=Msa0469170-mRNA-1:exon:17362;Parent=Msa0469170-mRNA-1 |
| chr3_3 | exon | 70920648 | 70920787 | 70920648 | ID=Msa0469170-mRNA-1:exon:17361;Parent=Msa0469170-mRNA-1 |
| chr3_3 | exon | 70920885 | 70920971 | 70920885 | ID=Msa0469170-mRNA-1:exon:17360;Parent=Msa0469170-mRNA-1 |
| chr3_3 | exon | 70921586 | 70921799 | 70921586 | ID=Msa0469170-mRNA-1:exon:17359;Parent=Msa0469170-mRNA-1 |
| chr3_3 | exon | 70922559 | 70922717 | 70922559 | ID=Msa0469170-mRNA-1:exon:17358;Parent=Msa0469170-mRNA-1 |
| chr3_3 | exon | 70923294 | 70923373 | 70923294 | ID=Msa0469170-mRNA-1:exon:17357;Parent=Msa0469170-mRNA-1 |
| chr3_3 | exon | 70924205 | 70924684 | 70924205 | ID=Msa0469170-mRNA-1:exon:17356;Parent=Msa0469170-mRNA-1 |
| chr3_3 | five_prime_UTR | 70924373 | 70924684 | 70924373 | ID=Msa0469170-mRNA-1:five_prime_utr;Parent=Msa0469170-mRNA-1 |
| chr3_3 | CDS | 70924205 | 70924372 | 70924205 | ID=Msa0469170-mRNA-1:cds;Parent=Msa0469170-mRNA-1 |
| chr3_3 | CDS | 70923294 | 70923373 | 70923294 | ID=Msa0469170-mRNA-1:cds;Parent=Msa0469170-mRNA-1 |
| chr3_3 | CDS | 70922559 | 70922717 | 70922559 | ID=Msa0469170-mRNA-1:cds;Parent=Msa0469170-mRNA-1 |
| chr3_3 | CDS | 70921586 | 70921799 | 70921586 | ID=Msa0469170-mRNA-1:cds;Parent=Msa0469170-mRNA-1 |
| chr3_3 | CDS | 70920885 | 70920971 | 70920885 | ID=Msa0469170-mRNA-1:cds;Parent=Msa0469170-mRNA-1 |
| chr3_3 | CDS | 70920648 | 70920787 | 70920648 | ID=Msa0469170-mRNA-1:cds;Parent=Msa0469170-mRNA-1 |
| chr3_3 | CDS | 70920267 | 70920347 | 70920267 | ID=Msa0469170-mRNA-1:cds;Parent=Msa0469170-mRNA-1 |
| chr3_3 | CDS | 70920077 | 70920141 | 70920077 | ID=Msa0469170-mRNA-1:cds;Parent=Msa0469170-mRNA-1 |
| chr3_3 | CDS | 70918568 | 70918740 | 70918568 | ID=Msa0469170-mRNA-1:cds;Parent=Msa0469170-mRNA-1 |
| chr3_3 | CDS | 70917515 | 70917645 | 70917515 | ID=Msa0469170-mRNA-1:cds;Parent=Msa0469170-mRNA-1 |
| chr3_3 | CDS | 70917325 | 70917412 | 70917325 | ID=Msa0469170-mRNA-1:cds;Parent=Msa0469170-mRNA-1 |
| chr3_3 | CDS | 70916455 | 70916668 | 70916455 | ID=Msa0469170-mRNA-1:cds;Parent=Msa0469170-mRNA-1 |
| chr3_3 | CDS | 70916225 | 70916328 | 70916225 | ID=Msa0469170-mRNA-1:cds;Parent=Msa0469170-mRNA-1 |
| chr3_3 | CDS | 70915630 | 70916088 | 70915630 | ID=Msa0469170-mRNA-1:cds;Parent=Msa0469170-mRNA-1 |
| chr3_3 | three_prime_UTR | 70915206 | 70915629 | 70915206 | ID=Msa0469170-mRNA-1:three_prime_utr;Parent=Msa0469170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
