AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0517040

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0517040 MtrunA17_Chr3g0128301 96.018 452 16 1 1 450 1 452 0.0 870
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0517040 AT1G18010.1 68.213 431 132 2 16 442 19 448 0.0 616
Msa0517040 AT1G18000.1 68.213 431 132 2 16 442 19 448 0.0 616

Find 99 sgRNAs with CRISPR-Local

Find 291 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTCACAAATCATCCTTAT+TGG 0.164299 3_4:-68564697 Msa0517040:CDS
GGCATGTTCAATGCTCTTTC+AGG 0.180358 3_4:-68564652 Msa0517040:CDS
CTGTTCTTGGATCTATTATA+TGG 0.213344 3_4:-68563826 Msa0517040:CDS
ATTAGTGTGGTTGCTGTTCT+TGG 0.242665 3_4:-68563839 Msa0517040:CDS
AGATGCCATGTTTCAGAGTA+TGG 0.258685 3_4:-68563690 Msa0517040:CDS
TGTTTCAGAGTATGGTTTAC+TGG 0.266519 3_4:-68563682 Msa0517040:CDS
TTTCACAAATCATCCTTATT+GGG 0.293770 3_4:-68564696 Msa0517040:CDS
GCATCGGAGCTGGACTATTA+TGG 0.301187 3_4:-68564399 Msa0517040:CDS
GTTAATGATGGAACTTATAT+AGG 0.307736 3_4:-68564223 Msa0517040:CDS
TTCAACATGGGTGGTGTTAT+TGG 0.313659 3_4:-68564298 Msa0517040:CDS
CGATTGTAATTAAGAATAAA+AGG 0.315237 3_4:+68564265 None:intergenic
GTAAGTTCCTTTACGATTCA+TGG 0.318909 3_4:+68564342 None:intergenic
TGTTCTTGGATCTATTATAT+GGG 0.338310 3_4:-68563825 Msa0517040:CDS
TGGAACTTATATAGGTTTCA+TGG 0.341520 3_4:-68564215 Msa0517040:CDS
AGTATGGTTTACTGGTCTAT+TGG 0.363404 3_4:-68563674 Msa0517040:CDS
AATTGGGATTGGTTACACTA+TGG 0.364274 3_4:-68563903 Msa0517040:CDS
GCTGCTCTCGGCATCGGAGC+TGG 0.372968 3_4:-68564409 Msa0517040:CDS
ACATAAACATGGCAAGGTCT+TGG 0.373279 3_4:-68563777 Msa0517040:CDS
TATTGGGGAGCACAAATGAT+AGG 0.383645 3_4:-68563929 Msa0517040:CDS
TTCTTAAATTGTTCTACAAT+TGG 0.385721 3_4:-68564069 Msa0517040:CDS
TTCACAATCAACTGTGTCAT+TGG 0.386175 3_4:+68563158 None:intergenic
TTCAATGCTCTTTCAGGAAT+GGG 0.404295 3_4:-68564646 Msa0517040:CDS
TGACACAGTTGATTGTGAAT+TGG 0.408150 3_4:-68563154 Msa0517040:CDS
GCACAAATGATAGGGTCAAT+TGG 0.413131 3_4:-68563920 Msa0517040:CDS
GCTTGTGTAGAGTGCGGTTA+AGG 0.415646 3_4:+68564585 None:intergenic
TTCTCATGATTCCTGCAGCT+TGG 0.429163 3_4:-68564039 Msa0517040:CDS
TCCGGTGCTGCTCTCGGCAT+CGG 0.430199 3_4:-68564415 Msa0517040:CDS
TAGAAAGAAAAGAGGAATTG+TGG 0.430494 3_4:-68563864 Msa0517040:CDS
TTACTGGTCTATTGGAGCAT+TGG 0.434243 3_4:-68563666 Msa0517040:CDS
GTGAAACAGAGATTCAGAAT+TGG 0.437440 3_4:+68564833 None:intergenic
TTTGTAAATAATATAATGGA+TGG 0.438919 3_4:-68562972 Msa0517040:three_prime_UTR
CACAAATGATAGGGTCAATT+GGG 0.440466 3_4:-68563919 Msa0517040:CDS
TTTAAGAGTAGAAAGAAAAG+AGG 0.440838 3_4:-68563872 Msa0517040:CDS
AGAAAGAAAAGAGGAATTGT+GGG 0.444597 3_4:-68563863 Msa0517040:CDS
GACACAGTTGATTGTGAATT+GGG 0.445991 3_4:-68563153 Msa0517040:CDS
ACTAAGCTATCCGTTATTGT+TGG 0.457774 3_4:-68563120 Msa0517040:CDS
CTTTCAGGAATGGGTGGTGG+TGG 0.463947 3_4:-68564637 Msa0517040:CDS
AGTAAAGTTATTCGTGATGA+TGG 0.467385 3_4:-68564145 Msa0517040:CDS
TCCTCCTATGTCCTTTACAC+TGG 0.471720 3_4:-68564487 Msa0517040:CDS
TATTATATGGGGTGGTGCAT+TGG 0.473668 3_4:-68563813 Msa0517040:CDS
GTTCAATGCTCTTTCAGGAA+TGG 0.477707 3_4:-68564647 Msa0517040:CDS
TCCGATGCCGAGAGCAGCAC+CGG 0.477834 3_4:+68564414 None:intergenic
AGATGTCATAATAGCACCTT+GGG 0.481690 3_4:+68564372 None:intergenic
TTGGAGATGAAGAATGGAAA+GGG 0.482649 3_4:+68564852 None:intergenic
ATCATTAAAACCAACAATAA+CGG 0.482912 3_4:+68563110 None:intergenic
ACAAATCATCCTTATTGGGT+TGG 0.488006 3_4:-68564692 Msa0517040:CDS
TCAGAATTGGAGATGAAGAA+TGG 0.491572 3_4:+68564846 None:intergenic
ATGATAGGGTCAATTGGGAT+TGG 0.495144 3_4:-68563914 Msa0517040:CDS
AACATGGGTGGTGTTATTGG+TGG 0.496677 3_4:-68564295 Msa0517040:CDS
GAAAGAGCATTGAACATGCC+TGG 0.498347 3_4:+68564655 None:intergenic
ATAAGGATGATTTGTGAAAG+AGG 0.505507 3_4:+68564700 None:intergenic
GAGTGCGGTTAAGGCGTTGT+TGG 0.510267 3_4:+68564594 None:intergenic
TAAGTTCCTTTACGATTCAT+GGG 0.510847 3_4:+68564343 None:intergenic
GTAGTTTCCGGTGCTGCTCT+CGG 0.511424 3_4:-68564421 Msa0517040:CDS
TTCCTTTACGATTCATGGGT+GGG 0.515970 3_4:+68564347 None:intergenic
GCTCTTTCAGGAATGGGTGG+TGG 0.525680 3_4:-68564640 Msa0517040:CDS
AGAGGAAAGAACCAGTGTAA+AGG 0.529052 3_4:+68564476 None:intergenic
ATTGGGGAGCACAAATGATA+GGG 0.533554 3_4:-68563928 Msa0517040:CDS
CATCATTAACAGTAGCAGCT+TGG 0.533655 3_4:+68564236 None:intergenic
TTGTAAATAATATAATGGAT+GGG 0.536565 3_4:-68562971 Msa0517040:three_prime_UTR
GTTGTTTATGATTGTAGTAG+AGG 0.539382 3_4:+68564458 None:intergenic
ATGACTCTGAAGTTCTTAGC+AGG 0.541389 3_4:-68563640 Msa0517040:intron
TATAAAGGGATACAAAGTGC+GGG 0.542643 3_4:-68563221 Msa0517040:CDS
ACCTGCGAAAAGAGTTAAGT+GGG 0.545077 3_4:+68564513 None:intergenic
TTTATTCTTAATTACAATCG+TGG 0.549060 3_4:-68564262 Msa0517040:CDS
CAAGCTGCTACTGTTAATGA+TGG 0.549832 3_4:-68564235 Msa0517040:CDS
TACCCACCCATGAATCGTAA+AGG 0.557859 3_4:-68564349 Msa0517040:CDS
CAATTTAGTTTGAGAACAAG+AGG 0.558289 3_4:-68563968 Msa0517040:CDS
TGTTCAACGACACCACCCAT+TGG 0.559220 3_4:+68564787 None:intergenic
TCACGAATAACTTTACTAGC+AGG 0.559403 3_4:+68564151 None:intergenic
GTTCCTTTACGATTCATGGG+TGG 0.571188 3_4:+68564346 None:intergenic
GTTCTTGGATCTATTATATG+GGG 0.579371 3_4:-68563824 Msa0517040:CDS
AGAACCAGTGTAAAGGACAT+AGG 0.581796 3_4:+68564483 None:intergenic
AACCTGCGAAAAGAGTTAAG+TGG 0.585770 3_4:+68564512 None:intergenic
CTTGGATCTATTATATGGGG+TGG 0.589106 3_4:-68563821 Msa0517040:CDS
ATTGGAGATGAAGAATGGAA+AGG 0.591883 3_4:+68564851 None:intergenic
AATGCTCTTTCAGGAATGGG+TGG 0.595210 3_4:-68564643 Msa0517040:CDS
AAATTACTAGACCAAGCTGC+AGG 0.599898 3_4:+68564028 None:intergenic
AAGATGTCATAATAGCACCT+TGG 0.600718 3_4:+68564371 None:intergenic
GATTAAACATAAACATGGCA+AGG 0.600741 3_4:-68563783 Msa0517040:CDS
TGAGGTTTCCGGTGGTTGAG+TGG 0.602501 3_4:+68564753 None:intergenic
AGAATCAGCCACTCAACCAC+CGG 0.603694 3_4:-68564761 Msa0517040:CDS
GGTGGCATCTATAACATCCT+CGG 0.603879 3_4:-68564538 Msa0517040:CDS
TGTTATAGATGCCACCACCT+AGG 0.620884 3_4:+68564545 None:intergenic
GGACTATTATGGAGTGCCCA+AGG 0.624792 3_4:-68564388 Msa0517040:CDS
TTGGACTTACACAGGTACAC+AGG 0.625881 3_4:-68563248 Msa0517040:intron
AGGAATTGTGGGAATTAGTG+TGG 0.626228 3_4:-68563852 Msa0517040:CDS
ATAAAGGGATACAAAGTGCG+GGG 0.631553 3_4:-68563220 Msa0517040:CDS
AAATGTTGCAACTGAGTGTG+TGG 0.638201 3_4:-68564095 Msa0517040:CDS
TTATAAAGGGATACAAAGTG+CGG 0.640266 3_4:-68563222 Msa0517040:CDS
ACCAGTGTAAAGGACATAGG+AGG 0.645176 3_4:+68564486 None:intergenic
AATTTAGTTTGAGAACAAGA+GGG 0.657205 3_4:-68563967 Msa0517040:CDS
AATCAGATTAAACATAAACA+TGG 0.664350 3_4:-68563788 Msa0517040:CDS
AAAGAGTTAAGTGGGGTCCG+AGG 0.668411 3_4:+68564521 None:intergenic
GTAAACCATACTCTGAAACA+TGG 0.672850 3_4:+68563685 None:intergenic
TAAAGGGATACAAAGTGCGG+GGG 0.691321 3_4:-68563219 Msa0517040:CDS
TGTGAAGCTTGTGTAGAGTG+CGG 0.751066 3_4:+68564579 None:intergenic
CCTGCGAAAAGAGTTAAGTG+GGG 0.759382 3_4:+68564514 None:intergenic
TGTGAAAGAGGACAATAACG+AGG 0.786049 3_4:-68563081 Msa0517040:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AGTTTTTGTAAATAATATAA+TGG - chr3_4:68564846-68564865 Msa0517040:five_prime_UTR 10.0%
!!! AGTTTTTGTAAATAATATAA+TGG - chr3_4:68564846-68564865 Msa0517040:five_prime_UTR 10.0%
!! AAAGAAAAATACAAAACAAA+AGG + chr3_4:68564103-68564122 None:intergenic 15.0%
!!! TTTGTTTTGTATTTTTCTTT+TGG - chr3_4:68564103-68564122 Msa0517040:CDS 15.0%
!!! TTGTTTTGTATTTTTCTTTT+GGG - chr3_4:68564104-68564123 Msa0517040:CDS 15.0%
!!! TTTGTAAATAATATAATGGA+TGG - chr3_4:68564850-68564869 Msa0517040:five_prime_UTR 15.0%
!!! TTGTAAATAATATAATGGAT+GGG - chr3_4:68564851-68564870 Msa0517040:five_prime_UTR 15.0%
!! AAAGAAAAATACAAAACAAA+AGG + chr3_4:68564103-68564122 None:intergenic 15.0%
!!! TTTGTTTTGTATTTTTCTTT+TGG - chr3_4:68564103-68564122 Msa0517040:CDS 15.0%
!!! TTGTTTTGTATTTTTCTTTT+GGG - chr3_4:68564104-68564123 Msa0517040:CDS 15.0%
!!! TTTGTAAATAATATAATGGA+TGG - chr3_4:68564850-68564869 Msa0517040:five_prime_UTR 15.0%
!! CGATTGTAATTAAGAATAAA+AGG + chr3_4:68563560-68563579 None:intergenic 20.0%
!! TTTATTCTTAATTACAATCG+TGG - chr3_4:68563560-68563579 Msa0517040:intron 20.0%
!! TTCTTAAATTGTTCTACAAT+TGG - chr3_4:68563753-68563772 Msa0517040:CDS 20.0%
!! AATCAGATTAAACATAAACA+TGG - chr3_4:68564034-68564053 Msa0517040:CDS 20.0%
!! TGAAACTTCAAGAAAATATT+TGG - chr3_4:68564359-68564378 Msa0517040:CDS 20.0%
!! AATAATCCACAAAAAAATAC+TGG + chr3_4:68564425-68564444 None:intergenic 20.0%
!!! TAATTTGTAGTTTTAGTGAT+TGG - chr3_4:68564482-68564501 Msa0517040:CDS 20.0%
!! ATCATTAAAACCAACAATAA+CGG + chr3_4:68564715-68564734 None:intergenic 20.0%
!!! ATTGTTGGTTTTAATGATTT+TGG - chr3_4:68564717-68564736 Msa0517040:CDS 20.0%
!! CGATTGTAATTAAGAATAAA+AGG + chr3_4:68563560-68563579 None:intergenic 20.0%
!! TTTATTCTTAATTACAATCG+TGG - chr3_4:68563560-68563579 Msa0517040:intron 20.0%
!! TTCTTAAATTGTTCTACAAT+TGG - chr3_4:68563753-68563772 Msa0517040:CDS 20.0%
!! AATCAGATTAAACATAAACA+TGG - chr3_4:68564034-68564053 Msa0517040:CDS 20.0%
!! TGAAACTTCAAGAAAATATT+TGG - chr3_4:68564359-68564378 Msa0517040:CDS 20.0%
!! AATAATCCACAAAAAAATAC+TGG + chr3_4:68564425-68564444 None:intergenic 20.0%
!!! TAATTTGTAGTTTTAGTGAT+TGG - chr3_4:68564482-68564501 Msa0517040:CDS 20.0%
!! ATCATTAAAACCAACAATAA+CGG + chr3_4:68564715-68564734 None:intergenic 20.0%
!!! ATTGTTGGTTTTAATGATTT+TGG - chr3_4:68564717-68564736 Msa0517040:CDS 20.0%
! TTTCACAAATCATCCTTATT+GGG - chr3_4:68563126-68563145 Msa0517040:CDS 25.0%
!! GAACTTACATTTCAATTTTC+TGG - chr3_4:68563495-68563514 Msa0517040:intron 25.0%
!! GTTAATGATGGAACTTATAT+AGG - chr3_4:68563599-68563618 Msa0517040:intron 25.0%
!!! AATTTAGTTTGAGAACAAGA+GGG - chr3_4:68563855-68563874 Msa0517040:CDS 25.0%
!!! GTTGAACAATGTGTTTTATT+GGG - chr3_4:68563877-68563896 Msa0517040:CDS 25.0%
!!! TTGAACAATGTGTTTTATTG+GGG - chr3_4:68563878-68563897 Msa0517040:CDS 25.0%
! TTTAAGAGTAGAAAGAAAAG+AGG - chr3_4:68563950-68563969 Msa0517040:CDS 25.0%
! TGTTCTTGGATCTATTATAT+GGG - chr3_4:68563997-68564016 Msa0517040:CDS 25.0%
! TTAACTATTCCATTTGTTCT+TGG - chr3_4:68564241-68564260 Msa0517040:CDS 25.0%
!!! TATCAACCAGTATTTTTTTG+TGG - chr3_4:68564416-68564435 Msa0517040:CDS 25.0%
! TTTCCAAATTTCAACTATCA+GGG + chr3_4:68564525-68564544 None:intergenic 25.0%
! ATTTCCAAATTTCAACTATC+AGG + chr3_4:68564526-68564545 None:intergenic 25.0%
! TTTCACAAATCATCCTTATT+GGG - chr3_4:68563126-68563145 Msa0517040:CDS 25.0%
!! GAACTTACATTTCAATTTTC+TGG - chr3_4:68563495-68563514 Msa0517040:intron 25.0%
!! GTTAATGATGGAACTTATAT+AGG - chr3_4:68563599-68563618 Msa0517040:intron 25.0%
!!! AATTTAGTTTGAGAACAAGA+GGG - chr3_4:68563855-68563874 Msa0517040:CDS 25.0%
!!! GTTGAACAATGTGTTTTATT+GGG - chr3_4:68563877-68563896 Msa0517040:CDS 25.0%
!!! TTGAACAATGTGTTTTATTG+GGG - chr3_4:68563878-68563897 Msa0517040:CDS 25.0%
! TTTAAGAGTAGAAAGAAAAG+AGG - chr3_4:68563950-68563969 Msa0517040:CDS 25.0%
! TGTTCTTGGATCTATTATAT+GGG - chr3_4:68563997-68564016 Msa0517040:CDS 25.0%
! TTAACTATTCCATTTGTTCT+TGG - chr3_4:68564241-68564260 Msa0517040:CDS 25.0%
!!! TATCAACCAGTATTTTTTTG+TGG - chr3_4:68564416-68564435 Msa0517040:CDS 25.0%
! TTTCCAAATTTCAACTATCA+GGG + chr3_4:68564525-68564544 None:intergenic 25.0%
! ATTTCCAAATTTCAACTATC+AGG + chr3_4:68564526-68564545 None:intergenic 25.0%
! ACTCTTTCACAATTTTCCAA+TGG - chr3_4:68563019-68563038 Msa0517040:three_prime_UTR 30.0%
! CTCTTTCACAATTTTCCAAT+GGG - chr3_4:68563020-68563039 Msa0517040:three_prime_UTR 30.0%
! AAGAAGTGATGAAGTTTTTG+AGG + chr3_4:68563090-68563109 None:intergenic 30.0%
! ATAAGGATGATTTGTGAAAG+AGG + chr3_4:68563125-68563144 None:intergenic 30.0%
CTTTCACAAATCATCCTTAT+TGG - chr3_4:68563125-68563144 Msa0517040:CDS 30.0%
AAAAACAAACCAACCCAATA+AGG + chr3_4:68563142-68563161 None:intergenic 30.0%
! TACACAAGCTTCACAATTTT+CGG - chr3_4:68563251-68563270 Msa0517040:intron 30.0%
GTTGTTTATGATTGTAGTAG+AGG + chr3_4:68563367-68563386 None:intergenic 30.0%
TAAGTTCCTTTACGATTCAT+GGG + chr3_4:68563482-68563501 None:intergenic 30.0%
!!! TTTCTGGAGTATTTTCAACA+TGG - chr3_4:68563511-68563530 Msa0517040:intron 30.0%
!!! TTCTGGAGTATTTTCAACAT+GGG - chr3_4:68563512-68563531 Msa0517040:intron 30.0%
TGGAACTTATATAGGTTTCA+TGG - chr3_4:68563607-68563626 Msa0517040:intron 30.0%
AGTAAAGTTATTCGTGATGA+TGG - chr3_4:68563677-68563696 Msa0517040:CDS 30.0%
!! CAATTTAGTTTGAGAACAAG+AGG - chr3_4:68563854-68563873 Msa0517040:CDS 30.0%
! GGTTGAACAATGTGTTTTAT+TGG - chr3_4:68563876-68563895 Msa0517040:CDS 30.0%
TAGAAAGAAAAGAGGAATTG+TGG - chr3_4:68563958-68563977 Msa0517040:CDS 30.0%
AGAAAGAAAAGAGGAATTGT+GGG - chr3_4:68563959-68563978 Msa0517040:CDS 30.0%
CTGTTCTTGGATCTATTATA+TGG - chr3_4:68563996-68564015 Msa0517040:CDS 30.0%
GTTCTTGGATCTATTATATG+GGG - chr3_4:68563998-68564017 Msa0517040:CDS 30.0%
GATTAAACATAAACATGGCA+AGG - chr3_4:68564039-68564058 Msa0517040:CDS 30.0%
AAAATGCAACCAAGAACAAA+TGG + chr3_4:68564253-68564272 None:intergenic 30.0%
TTAGTGATTGGCATTTCATT+TGG - chr3_4:68564494-68564513 Msa0517040:CDS 30.0%
TATCCCTGATAGTTGAAATT+TGG - chr3_4:68564519-68564538 Msa0517040:CDS 30.0%
! AGGTACACAGGATTTTATAA+AGG - chr3_4:68564586-68564605 Msa0517040:CDS 30.0%
! GGTACACAGGATTTTATAAA+GGG - chr3_4:68564587-68564606 Msa0517040:CDS 30.0%
TTATAAAGGGATACAAAGTG+CGG - chr3_4:68564600-68564619 Msa0517040:CDS 30.0%
!!! AATGATTTTGGTTGTGAAAG+AGG - chr3_4:68564729-68564748 Msa0517040:CDS 30.0%
! ACTCTTTCACAATTTTCCAA+TGG - chr3_4:68563019-68563038 Msa0517040:three_prime_UTR 30.0%
! CTCTTTCACAATTTTCCAAT+GGG - chr3_4:68563020-68563039 Msa0517040:three_prime_UTR 30.0%
! AAGAAGTGATGAAGTTTTTG+AGG + chr3_4:68563090-68563109 None:intergenic 30.0%
! ATAAGGATGATTTGTGAAAG+AGG + chr3_4:68563125-68563144 None:intergenic 30.0%
CTTTCACAAATCATCCTTAT+TGG - chr3_4:68563125-68563144 Msa0517040:CDS 30.0%
AAAAACAAACCAACCCAATA+AGG + chr3_4:68563142-68563161 None:intergenic 30.0%
! TACACAAGCTTCACAATTTT+CGG - chr3_4:68563251-68563270 Msa0517040:intron 30.0%
GTTGTTTATGATTGTAGTAG+AGG + chr3_4:68563367-68563386 None:intergenic 30.0%
TAAGTTCCTTTACGATTCAT+GGG + chr3_4:68563482-68563501 None:intergenic 30.0%
!!! TTTCTGGAGTATTTTCAACA+TGG - chr3_4:68563511-68563530 Msa0517040:intron 30.0%
!!! TTCTGGAGTATTTTCAACAT+GGG - chr3_4:68563512-68563531 Msa0517040:intron 30.0%
TGGAACTTATATAGGTTTCA+TGG - chr3_4:68563607-68563626 Msa0517040:intron 30.0%
AGTAAAGTTATTCGTGATGA+TGG - chr3_4:68563677-68563696 Msa0517040:CDS 30.0%
!! CAATTTAGTTTGAGAACAAG+AGG - chr3_4:68563854-68563873 Msa0517040:CDS 30.0%
! GGTTGAACAATGTGTTTTAT+TGG - chr3_4:68563876-68563895 Msa0517040:CDS 30.0%
TAGAAAGAAAAGAGGAATTG+TGG - chr3_4:68563958-68563977 Msa0517040:CDS 30.0%
AGAAAGAAAAGAGGAATTGT+GGG - chr3_4:68563959-68563978 Msa0517040:CDS 30.0%
CTGTTCTTGGATCTATTATA+TGG - chr3_4:68563996-68564015 Msa0517040:CDS 30.0%
GTTCTTGGATCTATTATATG+GGG - chr3_4:68563998-68564017 Msa0517040:CDS 30.0%
GATTAAACATAAACATGGCA+AGG - chr3_4:68564039-68564058 Msa0517040:CDS 30.0%
AAAATGCAACCAAGAACAAA+TGG + chr3_4:68564253-68564272 None:intergenic 30.0%
TTAGTGATTGGCATTTCATT+TGG - chr3_4:68564494-68564513 Msa0517040:CDS 30.0%
TATCCCTGATAGTTGAAATT+TGG - chr3_4:68564519-68564538 Msa0517040:CDS 30.0%
! AGGTACACAGGATTTTATAA+AGG - chr3_4:68564586-68564605 Msa0517040:CDS 30.0%
! GGTACACAGGATTTTATAAA+GGG - chr3_4:68564587-68564606 Msa0517040:CDS 30.0%
TTATAAAGGGATACAAAGTG+CGG - chr3_4:68564600-68564619 Msa0517040:CDS 30.0%
!!! AATGATTTTGGTTGTGAAAG+AGG - chr3_4:68564729-68564748 Msa0517040:CDS 30.0%
ATTGGAGATGAAGAATGGAA+AGG + chr3_4:68562974-68562993 None:intergenic 35.0%
TCAGAATTGGAGATGAAGAA+TGG + chr3_4:68562979-68562998 None:intergenic 35.0%
GTGAAACAGAGATTCAGAAT+TGG + chr3_4:68562992-68563011 None:intergenic 35.0%
! TTTCACAATTTTCCAATGGG+TGG - chr3_4:68563023-68563042 Msa0517040:three_prime_UTR 35.0%
!!! GATGAAGTTTTTGAGGTTTC+CGG + chr3_4:68563083-68563102 None:intergenic 35.0%
ACAAATCATCCTTATTGGGT+TGG - chr3_4:68563130-68563149 Msa0517040:CDS 35.0%
!!! TTGGTTTGTTTTTGTTGTCC+AGG - chr3_4:68563149-68563168 Msa0517040:CDS 35.0%
TTCAATGCTCTTTCAGGAAT+GGG - chr3_4:68563176-68563195 Msa0517040:CDS 35.0%
! TTCACAATTTTCGGAATCCT+AGG - chr3_4:68563260-68563279 Msa0517040:intron 35.0%
AGATGTCATAATAGCACCTT+GGG + chr3_4:68563453-68563472 None:intergenic 35.0%
AAGATGTCATAATAGCACCT+TGG + chr3_4:68563454-68563473 None:intergenic 35.0%
GTAAGTTCCTTTACGATTCA+TGG + chr3_4:68563483-68563502 None:intergenic 35.0%
! TTCATGGCTTTTATGTCACT+AGG - chr3_4:68563623-68563642 Msa0517040:intron 35.0%
! TCATGGCTTTTATGTCACTA+GGG - chr3_4:68563624-68563643 Msa0517040:intron 35.0%
TCACGAATAACTTTACTAGC+AGG + chr3_4:68563674-68563693 None:intergenic 35.0%
CACAAATGATAGGGTCAATT+GGG - chr3_4:68563903-68563922 Msa0517040:CDS 35.0%
!! AATTGGGATTGGTTACACTA+TGG - chr3_4:68563919-68563938 Msa0517040:CDS 35.0%
!! GTAAACCATACTCTGAAACA+TGG + chr3_4:68564140-68564159 None:intergenic 35.0%
TGTTTCAGAGTATGGTTTAC+TGG - chr3_4:68564140-68564159 Msa0517040:CDS 35.0%
! AGTATGGTTTACTGGTCTAT+TGG - chr3_4:68564148-68564167 Msa0517040:CDS 35.0%
CTACTGCTAGTACTAATGTT+TGG - chr3_4:68564555-68564574 Msa0517040:CDS 35.0%
ACTAATGTTTGGACTTACAC+AGG - chr3_4:68564566-68564585 Msa0517040:CDS 35.0%
TATAAAGGGATACAAAGTGC+GGG - chr3_4:68564601-68564620 Msa0517040:CDS 35.0%
TTCACAATCAACTGTGTCAT+TGG + chr3_4:68564667-68564686 None:intergenic 35.0%
TGACACAGTTGATTGTGAAT+TGG - chr3_4:68564668-68564687 Msa0517040:CDS 35.0%
GACACAGTTGATTGTGAATT+GGG - chr3_4:68564669-68564688 Msa0517040:CDS 35.0%
ACTAAGCTATCCGTTATTGT+TGG - chr3_4:68564702-68564721 Msa0517040:CDS 35.0%
ATTGGAGATGAAGAATGGAA+AGG + chr3_4:68562974-68562993 None:intergenic 35.0%
TCAGAATTGGAGATGAAGAA+TGG + chr3_4:68562979-68562998 None:intergenic 35.0%
GTGAAACAGAGATTCAGAAT+TGG + chr3_4:68562992-68563011 None:intergenic 35.0%
! TTTCACAATTTTCCAATGGG+TGG - chr3_4:68563023-68563042 Msa0517040:three_prime_UTR 35.0%
!!! GATGAAGTTTTTGAGGTTTC+CGG + chr3_4:68563083-68563102 None:intergenic 35.0%
ACAAATCATCCTTATTGGGT+TGG - chr3_4:68563130-68563149 Msa0517040:CDS 35.0%
!!! TTGGTTTGTTTTTGTTGTCC+AGG - chr3_4:68563149-68563168 Msa0517040:CDS 35.0%
TTCAATGCTCTTTCAGGAAT+GGG - chr3_4:68563176-68563195 Msa0517040:CDS 35.0%
! TTCACAATTTTCGGAATCCT+AGG - chr3_4:68563260-68563279 Msa0517040:intron 35.0%
AGATGTCATAATAGCACCTT+GGG + chr3_4:68563453-68563472 None:intergenic 35.0%
AAGATGTCATAATAGCACCT+TGG + chr3_4:68563454-68563473 None:intergenic 35.0%
GTAAGTTCCTTTACGATTCA+TGG + chr3_4:68563483-68563502 None:intergenic 35.0%
! TTCATGGCTTTTATGTCACT+AGG - chr3_4:68563623-68563642 Msa0517040:intron 35.0%
! TCATGGCTTTTATGTCACTA+GGG - chr3_4:68563624-68563643 Msa0517040:intron 35.0%
TCACGAATAACTTTACTAGC+AGG + chr3_4:68563674-68563693 None:intergenic 35.0%
CACAAATGATAGGGTCAATT+GGG - chr3_4:68563903-68563922 Msa0517040:CDS 35.0%
!! AATTGGGATTGGTTACACTA+TGG - chr3_4:68563919-68563938 Msa0517040:CDS 35.0%
!! GTAAACCATACTCTGAAACA+TGG + chr3_4:68564140-68564159 None:intergenic 35.0%
TGTTTCAGAGTATGGTTTAC+TGG - chr3_4:68564140-68564159 Msa0517040:CDS 35.0%
! AGTATGGTTTACTGGTCTAT+TGG - chr3_4:68564148-68564167 Msa0517040:CDS 35.0%
CTACTGCTAGTACTAATGTT+TGG - chr3_4:68564555-68564574 Msa0517040:CDS 35.0%
ACTAATGTTTGGACTTACAC+AGG - chr3_4:68564566-68564585 Msa0517040:CDS 35.0%
TATAAAGGGATACAAAGTGC+GGG - chr3_4:68564601-68564620 Msa0517040:CDS 35.0%
TTCACAATCAACTGTGTCAT+TGG + chr3_4:68564667-68564686 None:intergenic 35.0%
TGACACAGTTGATTGTGAAT+TGG - chr3_4:68564668-68564687 Msa0517040:CDS 35.0%
GACACAGTTGATTGTGAATT+GGG - chr3_4:68564669-68564688 Msa0517040:CDS 35.0%
ACTAAGCTATCCGTTATTGT+TGG - chr3_4:68564702-68564721 Msa0517040:CDS 35.0%
GTTCAATGCTCTTTCAGGAA+TGG - chr3_4:68563175-68563194 Msa0517040:CDS 40.0%
! ACAATTTTCGGAATCCTAGG+TGG - chr3_4:68563263-68563282 Msa0517040:intron 40.0%
ACCTGCGAAAAGAGTTAAGT+GGG + chr3_4:68563312-68563331 None:intergenic 40.0%
AACCTGCGAAAAGAGTTAAG+TGG + chr3_4:68563313-68563332 None:intergenic 40.0%
AGAACCAGTGTAAAGGACAT+AGG + chr3_4:68563342-68563361 None:intergenic 40.0%
AGAGGAAAGAACCAGTGTAA+AGG + chr3_4:68563349-68563368 None:intergenic 40.0%
!! CAAGCTTTTGCTGTAGTTTC+CGG - chr3_4:68563389-68563408 Msa0517040:intron 40.0%
TTCCTTTACGATTCATGGGT+GGG + chr3_4:68563478-68563497 None:intergenic 40.0%
!! TGGAGTATTTTCAACATGGG+TGG - chr3_4:68563515-68563534 Msa0517040:intron 40.0%
!! TTCAACATGGGTGGTGTTAT+TGG - chr3_4:68563524-68563543 Msa0517040:intron 40.0%
CATCATTAACAGTAGCAGCT+TGG + chr3_4:68563589-68563608 None:intergenic 40.0%
CAAGCTGCTACTGTTAATGA+TGG - chr3_4:68563587-68563606 Msa0517040:intron 40.0%
AAATGTTGCAACTGAGTGTG+TGG - chr3_4:68563727-68563746 Msa0517040:CDS 40.0%
AAATTACTAGACCAAGCTGC+AGG + chr3_4:68563797-68563816 None:intergenic 40.0%
! TATTGGGGAGCACAAATGAT+AGG - chr3_4:68563893-68563912 Msa0517040:CDS 40.0%
! ATTGGGGAGCACAAATGATA+GGG - chr3_4:68563894-68563913 Msa0517040:CDS 40.0%
GCACAAATGATAGGGTCAAT+TGG - chr3_4:68563902-68563921 Msa0517040:CDS 40.0%
ATGATAGGGTCAATTGGGAT+TGG - chr3_4:68563908-68563927 Msa0517040:CDS 40.0%
AGGAATTGTGGGAATTAGTG+TGG - chr3_4:68563970-68563989 Msa0517040:CDS 40.0%
! ATTAGTGTGGTTGCTGTTCT+TGG - chr3_4:68563983-68564002 Msa0517040:CDS 40.0%
CTTGGATCTATTATATGGGG+TGG - chr3_4:68564001-68564020 Msa0517040:CDS 40.0%
TATTATATGGGGTGGTGCAT+TGG - chr3_4:68564009-68564028 Msa0517040:CDS 40.0%
ACATAAACATGGCAAGGTCT+TGG - chr3_4:68564045-68564064 Msa0517040:CDS 40.0%
! TGGCAAGGTCTTGGATTTTA+AGG - chr3_4:68564054-68564073 Msa0517040:CDS 40.0%
!! GTCTTGGATTTTAAGGAGTC+TGG - chr3_4:68564061-68564080 Msa0517040:CDS 40.0%
AGATGCCATGTTTCAGAGTA+TGG - chr3_4:68564132-68564151 Msa0517040:CDS 40.0%
! TTACTGGTCTATTGGAGCAT+TGG - chr3_4:68564156-68564175 Msa0517040:CDS 40.0%
!! ATGACTCTGAAGTTCTTAGC+AGG - chr3_4:68564182-68564201 Msa0517040:CDS 40.0%
ATAAAGGGATACAAAGTGCG+GGG - chr3_4:68564602-68564621 Msa0517040:CDS 40.0%
TGTGAAAGAGGACAATAACG+AGG - chr3_4:68564741-68564760 Msa0517040:CDS 40.0%
GTTCAATGCTCTTTCAGGAA+TGG - chr3_4:68563175-68563194 Msa0517040:CDS 40.0%
! ACAATTTTCGGAATCCTAGG+TGG - chr3_4:68563263-68563282 Msa0517040:intron 40.0%
ACCTGCGAAAAGAGTTAAGT+GGG + chr3_4:68563312-68563331 None:intergenic 40.0%
AACCTGCGAAAAGAGTTAAG+TGG + chr3_4:68563313-68563332 None:intergenic 40.0%
AGAACCAGTGTAAAGGACAT+AGG + chr3_4:68563342-68563361 None:intergenic 40.0%
AGAGGAAAGAACCAGTGTAA+AGG + chr3_4:68563349-68563368 None:intergenic 40.0%
!! CAAGCTTTTGCTGTAGTTTC+CGG - chr3_4:68563389-68563408 Msa0517040:intron 40.0%
TTCCTTTACGATTCATGGGT+GGG + chr3_4:68563478-68563497 None:intergenic 40.0%
!! TGGAGTATTTTCAACATGGG+TGG - chr3_4:68563515-68563534 Msa0517040:intron 40.0%
!! TTCAACATGGGTGGTGTTAT+TGG - chr3_4:68563524-68563543 Msa0517040:intron 40.0%
CATCATTAACAGTAGCAGCT+TGG + chr3_4:68563589-68563608 None:intergenic 40.0%
CAAGCTGCTACTGTTAATGA+TGG - chr3_4:68563587-68563606 Msa0517040:intron 40.0%
AAATGTTGCAACTGAGTGTG+TGG - chr3_4:68563727-68563746 Msa0517040:CDS 40.0%
AAATTACTAGACCAAGCTGC+AGG + chr3_4:68563797-68563816 None:intergenic 40.0%
! TATTGGGGAGCACAAATGAT+AGG - chr3_4:68563893-68563912 Msa0517040:CDS 40.0%
! ATTGGGGAGCACAAATGATA+GGG - chr3_4:68563894-68563913 Msa0517040:CDS 40.0%
GCACAAATGATAGGGTCAAT+TGG - chr3_4:68563902-68563921 Msa0517040:CDS 40.0%
ATGATAGGGTCAATTGGGAT+TGG - chr3_4:68563908-68563927 Msa0517040:CDS 40.0%
AGGAATTGTGGGAATTAGTG+TGG - chr3_4:68563970-68563989 Msa0517040:CDS 40.0%
! ATTAGTGTGGTTGCTGTTCT+TGG - chr3_4:68563983-68564002 Msa0517040:CDS 40.0%
CTTGGATCTATTATATGGGG+TGG - chr3_4:68564001-68564020 Msa0517040:CDS 40.0%
TATTATATGGGGTGGTGCAT+TGG - chr3_4:68564009-68564028 Msa0517040:CDS 40.0%
ACATAAACATGGCAAGGTCT+TGG - chr3_4:68564045-68564064 Msa0517040:CDS 40.0%
! TGGCAAGGTCTTGGATTTTA+AGG - chr3_4:68564054-68564073 Msa0517040:CDS 40.0%
!! GTCTTGGATTTTAAGGAGTC+TGG - chr3_4:68564061-68564080 Msa0517040:CDS 40.0%
AGATGCCATGTTTCAGAGTA+TGG - chr3_4:68564132-68564151 Msa0517040:CDS 40.0%
! TTACTGGTCTATTGGAGCAT+TGG - chr3_4:68564156-68564175 Msa0517040:CDS 40.0%
!! ATGACTCTGAAGTTCTTAGC+AGG - chr3_4:68564182-68564201 Msa0517040:CDS 40.0%
ATAAAGGGATACAAAGTGCG+GGG - chr3_4:68564602-68564621 Msa0517040:CDS 40.0%
TGTGAAAGAGGACAATAACG+AGG - chr3_4:68564741-68564760 Msa0517040:CDS 40.0%
!!! GAAGTTTTTGAGGTTTCCGG+TGG + chr3_4:68563080-68563099 None:intergenic 45.0%
!! GAAAGAGCATTGAACATGCC+TGG + chr3_4:68563170-68563189 None:intergenic 45.0%
GGCATGTTCAATGCTCTTTC+AGG - chr3_4:68563170-68563189 Msa0517040:CDS 45.0%
AATGCTCTTTCAGGAATGGG+TGG - chr3_4:68563179-68563198 Msa0517040:CDS 45.0%
TGTGAAGCTTGTGTAGAGTG+CGG + chr3_4:68563246-68563265 None:intergenic 45.0%
! ATTTTCGGAATCCTAGGTGG+TGG - chr3_4:68563266-68563285 Msa0517040:intron 45.0%
TGTTATAGATGCCACCACCT+AGG + chr3_4:68563280-68563299 None:intergenic 45.0%
GGTGGCATCTATAACATCCT+CGG - chr3_4:68563284-68563303 Msa0517040:intron 45.0%
CCTGCGAAAAGAGTTAAGTG+GGG + chr3_4:68563311-68563330 None:intergenic 45.0%
TCCTCCTATGTCCTTTACAC+TGG - chr3_4:68563335-68563354 Msa0517040:intron 45.0%
ACCAGTGTAAAGGACATAGG+AGG + chr3_4:68563339-68563358 None:intergenic 45.0%
TACCCACCCATGAATCGTAA+AGG - chr3_4:68563473-68563492 Msa0517040:intron 45.0%
GTTCCTTTACGATTCATGGG+TGG + chr3_4:68563479-68563498 None:intergenic 45.0%
!! AACATGGGTGGTGTTATTGG+TGG - chr3_4:68563527-68563546 Msa0517040:intron 45.0%
TTCTCATGATTCCTGCAGCT+TGG - chr3_4:68563783-68563802 Msa0517040:CDS 45.0%
!!! GAGTCTGGTTCTGATTTTGC+TGG - chr3_4:68564076-68564095 Msa0517040:CDS 45.0%
TTGGACTTACACAGGTACAC+AGG - chr3_4:68564574-68564593 Msa0517040:CDS 45.0%
TAAAGGGATACAAAGTGCGG+GGG - chr3_4:68564603-68564622 Msa0517040:CDS 45.0%
!!! GAAGTTTTTGAGGTTTCCGG+TGG + chr3_4:68563080-68563099 None:intergenic 45.0%
!! GAAAGAGCATTGAACATGCC+TGG + chr3_4:68563170-68563189 None:intergenic 45.0%
GGCATGTTCAATGCTCTTTC+AGG - chr3_4:68563170-68563189 Msa0517040:CDS 45.0%
AATGCTCTTTCAGGAATGGG+TGG - chr3_4:68563179-68563198 Msa0517040:CDS 45.0%
TGTGAAGCTTGTGTAGAGTG+CGG + chr3_4:68563246-68563265 None:intergenic 45.0%
! ATTTTCGGAATCCTAGGTGG+TGG - chr3_4:68563266-68563285 Msa0517040:intron 45.0%
TGTTATAGATGCCACCACCT+AGG + chr3_4:68563280-68563299 None:intergenic 45.0%
GGTGGCATCTATAACATCCT+CGG - chr3_4:68563284-68563303 Msa0517040:intron 45.0%
CCTGCGAAAAGAGTTAAGTG+GGG + chr3_4:68563311-68563330 None:intergenic 45.0%
TCCTCCTATGTCCTTTACAC+TGG - chr3_4:68563335-68563354 Msa0517040:intron 45.0%
ACCAGTGTAAAGGACATAGG+AGG + chr3_4:68563339-68563358 None:intergenic 45.0%
TACCCACCCATGAATCGTAA+AGG - chr3_4:68563473-68563492 Msa0517040:intron 45.0%
GTTCCTTTACGATTCATGGG+TGG + chr3_4:68563479-68563498 None:intergenic 45.0%
!! AACATGGGTGGTGTTATTGG+TGG - chr3_4:68563527-68563546 Msa0517040:intron 45.0%
TTCTCATGATTCCTGCAGCT+TGG - chr3_4:68563783-68563802 Msa0517040:CDS 45.0%
!!! GAGTCTGGTTCTGATTTTGC+TGG - chr3_4:68564076-68564095 Msa0517040:CDS 45.0%
TTGGACTTACACAGGTACAC+AGG - chr3_4:68564574-68564593 Msa0517040:CDS 45.0%
TAAAGGGATACAAAGTGCGG+GGG - chr3_4:68564603-68564622 Msa0517040:CDS 45.0%
!!! ATTAAAAAAATATTATGTTT+TGG + chr3_4:68564332-68564351 None:intergenic 5.0%
!!! ATTAAAAAAATATTATGTTT+TGG + chr3_4:68564332-68564351 None:intergenic 5.0%
TGTTCAACGACACCACCCAT+TGG + chr3_4:68563038-68563057 None:intergenic 50.0%
AGAATCAGCCACTCAACCAC+CGG - chr3_4:68563061-68563080 Msa0517040:exon 50.0%
GCTTGTGTAGAGTGCGGTTA+AGG + chr3_4:68563240-68563259 None:intergenic 50.0%
AAAGAGTTAAGTGGGGTCCG+AGG + chr3_4:68563304-68563323 None:intergenic 50.0%
! CCCCACTTAACTCTTTTCGC+AGG - chr3_4:68563308-68563327 Msa0517040:intron 50.0%
GCATCGGAGCTGGACTATTA+TGG - chr3_4:68563423-68563442 Msa0517040:intron 50.0%
! GGACTATTATGGAGTGCCCA+AGG - chr3_4:68563434-68563453 Msa0517040:intron 50.0%
TGTTCAACGACACCACCCAT+TGG + chr3_4:68563038-68563057 None:intergenic 50.0%
AGAATCAGCCACTCAACCAC+CGG - chr3_4:68563061-68563080 Msa0517040:exon 50.0%
GCTTGTGTAGAGTGCGGTTA+AGG + chr3_4:68563240-68563259 None:intergenic 50.0%
AAAGAGTTAAGTGGGGTCCG+AGG + chr3_4:68563304-68563323 None:intergenic 50.0%
! CCCCACTTAACTCTTTTCGC+AGG - chr3_4:68563308-68563327 Msa0517040:intron 50.0%
GCATCGGAGCTGGACTATTA+TGG - chr3_4:68563423-68563442 Msa0517040:intron 50.0%
! GGACTATTATGGAGTGCCCA+AGG - chr3_4:68563434-68563453 Msa0517040:intron 50.0%
TGAGGTTTCCGGTGGTTGAG+TGG + chr3_4:68563072-68563091 None:intergenic 55.0%
GCTCTTTCAGGAATGGGTGG+TGG - chr3_4:68563182-68563201 Msa0517040:CDS 55.0%
! CTTTCAGGAATGGGTGGTGG+TGG - chr3_4:68563185-68563204 Msa0517040:CDS 55.0%
!! GAGTGCGGTTAAGGCGTTGT+TGG + chr3_4:68563231-68563250 None:intergenic 55.0%
!! GTAGTTTCCGGTGCTGCTCT+CGG - chr3_4:68563401-68563420 Msa0517040:intron 55.0%
TGAGGTTTCCGGTGGTTGAG+TGG + chr3_4:68563072-68563091 None:intergenic 55.0%
GCTCTTTCAGGAATGGGTGG+TGG - chr3_4:68563182-68563201 Msa0517040:CDS 55.0%
! CTTTCAGGAATGGGTGGTGG+TGG - chr3_4:68563185-68563204 Msa0517040:CDS 55.0%
!! GAGTGCGGTTAAGGCGTTGT+TGG + chr3_4:68563231-68563250 None:intergenic 55.0%
!! GTAGTTTCCGGTGCTGCTCT+CGG - chr3_4:68563401-68563420 Msa0517040:intron 55.0%
!! TCCGGTGCTGCTCTCGGCAT+CGG - chr3_4:68563407-68563426 Msa0517040:intron 65.0%
TCCGATGCCGAGAGCAGCAC+CGG + chr3_4:68563411-68563430 None:intergenic 65.0%
!! TCCGGTGCTGCTCTCGGCAT+CGG - chr3_4:68563407-68563426 Msa0517040:intron 65.0%
TCCGATGCCGAGAGCAGCAC+CGG + chr3_4:68563411-68563430 None:intergenic 65.0%
! GCTGCTCTCGGCATCGGAGC+TGG - chr3_4:68563413-68563432 Msa0517040:intron 70.0%
GTGCGGGGGCTGCAGTTGCA+TGG - chr3_4:68564617-68564636 Msa0517040:CDS 70.0%
! GCTGCTCTCGGCATCGGAGC+TGG - chr3_4:68563413-68563432 Msa0517040:intron 70.0%
GTGCGGGGGCTGCAGTTGCA+TGG - chr3_4:68564617-68564636 Msa0517040:CDS 70.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 68562971 68564873 68562971 ID=Msa0517040;Name=Msa0517040
chr3_4 mRNA 68562971 68564873 68562971 ID=Msa0517040-mRNA-1;Parent=Msa0517040;Name=Msa0517040-mRNA-1;_AED=0.25;_eAED=0.25;_QI=67|1|1|1|1|1|2|99|450
chr3_4 exon 68562971 68563256 68562971 ID=Msa0517040-mRNA-1:exon:18137;Parent=Msa0517040-mRNA-1
chr3_4 exon 68563641 68564873 68563641 ID=Msa0517040-mRNA-1:exon:18136;Parent=Msa0517040-mRNA-1
chr3_4 five_prime_UTR 68564807 68564873 68564807 ID=Msa0517040-mRNA-1:five_prime_utr;Parent=Msa0517040-mRNA-1
chr3_4 CDS 68563641 68564806 68563641 ID=Msa0517040-mRNA-1:cds;Parent=Msa0517040-mRNA-1
chr3_4 CDS 68563070 68563256 68563070 ID=Msa0517040-mRNA-1:cds;Parent=Msa0517040-mRNA-1
chr3_4 three_prime_UTR 68562971 68563069 68562971 ID=Msa0517040-mRNA-1:three_prime_utr;Parent=Msa0517040-mRNA-1
Gene Sequence

>Msa0517040

ATGGGTGGTGTCGTTGAACATGAAGAATCAGCCACTCAACCACCGGAAACCTCAAAAACTTCATCACTTCTTAGATACAATTCACCTCTTTCACAAATCATCCTTATTGGGTTGGTTTGTTTTTGTTGTCCAGGCATGTTCAATGCTCTTTCAGGAATGGGTGGTGGTGGTCAAGTCAATGCAACAGCTTCCAACAACGCCTTAACCGCACTCTACACAAGCTTCACAATTTTCGGAATCCTAGGTGGTGGCATCTATAACATCCTCGGACCCCACTTAACTCTTTTCGCAGGTTGTTCCTCCTATGTCCTTTACACTGGTTCTTTCCTCTACTACAATCATAAACAACATCAAGCTTTTGCTGTAGTTTCCGGTGCTGCTCTCGGCATCGGAGCTGGACTATTATGGAGTGCCCAAGGTGCTATTATGACATCTTACCCACCCATGAATCGTAAAGGAACTTACATTTCAATTTTCTGGAGTATTTTCAACATGGGTGGTGTTATTGGTGGTTTAATTCCTTTTATTCTTAATTACAATCGTGGCGACCAAGCTGCTACTGTTAATGATGGAACTTATATAGGTTTCATGGCTTTTATGTCACTAGGGACTGTTTTGTCTCTAACTATTTTACCTGCTAGTAAAGTTATTCGTGATGATGGAACAAAGTGTACAAATATGTTGTACTCAAATGTTGCAACTGAGTGTGTGGAGATTCTTAAATTGTTCTACAATTGGAAGATGCTTCTCATGATTCCTGCAGCTTGGTCTAGTAATTTTTTTTACGCATATCAGTTTAATCATGTTAATAAGACACAATTTAGTTTGAGAACAAGAGGGTTGAACAATGTGTTTTATTGGGGAGCACAAATGATAGGGTCAATTGGGATTGGTTACACTATGGATTTCAGTTTTAAGAGTAGAAAGAAAAGAGGAATTGTGGGAATTAGTGTGGTTGCTGTTCTTGGATCTATTATATGGGGTGGTGCATTGGCTAATCAGATTAAACATAAACATGGCAAGGTCTTGGATTTTAAGGAGTCTGGTTCTGATTTTGCTGGTCCTTTTGTTTTGTATTTTTCTTTTGGGCTGTTAGATGCCATGTTTCAGAGTATGGTTTACTGGTCTATTGGAGCATTGGCTAATGACTCTGAAGTTCTTAGCAGGTACACAGGATTTTATAAAGGGATACAAAGTGCGGGGGCTGCAGTTGCATGGCAAATTGATAATCACAATGTATCTCCAATGACACAGTTGATTGTGAATTGGGTGCTCACTACACTAAGCTATCCGTTATTGTTGGTTTTAATGATTTTGGTTGTGAAAGAGGACAATAACGAGGAAGAGAAATGA
Protein sequence

>Msa0517040

MGGVVEHEESATQPPETSKTSSLLRYNSPLSQIILIGLVCFCCPGMFNALSGMGGGGQVNATASNNALTALYTSFTIFGILGGGIYNILGPHLTLFAGCSSYVLYTGSFLYYNHKQHQAFAVVSGAALGIGAGLLWSAQGAIMTSYPPMNRKGTYISIFWSIFNMGGVIGGLIPFILNYNRGDQAATVNDGTYIGFMAFMSLGTVLSLTILPASKVIRDDGTKCTNMLYSNVATECVEILKLFYNWKMLLMIPAAWSSNFFYAYQFNHVNKTQFSLRTRGLNNVFYWGAQMIGSIGIGYTMDFSFKSRKKRGIVGISVVAVLGSIIWGGALANQIKHKHGKVLDFKESGSDFAGPFVLYFSFGLLDAMFQSMVYWSIGALANDSEVLSRYTGFYKGIQSAGAAVAWQIDNHNVSPMTQLIVNWVLTTLSYPLLLVLMILVVKEDNNEEEK*