Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0520420 | XP_003603190.1 | 98.371 | 307 | 5 | 0 | 4 | 310 | 51 | 357 | 0.0 | 629 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0520420 | sp|Q8RUF8|NILP3_ARATH | 86.139 | 303 | 42 | 0 | 8 | 310 | 67 | 369 | 0.0 | 536 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0520420 | G7J8D4 | 98.371 | 307 | 5 | 0 | 4 | 310 | 51 | 357 | 0.0 | 629 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0092820 | Msa0520420 | 0.872100 | 4.121864e-67 | -8.615850e-47 |
| Msa0476390 | Msa0520420 | 0.947281 | 9.128924e-106 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0520420 | MtrunA17_Chr3g0136101 | 98.371 | 307 | 5 | 0 | 4 | 310 | 51 | 357 | 0.0 | 629 |
| Msa0520420 | MtrunA17_Chr1g0213231 | 32.721 | 272 | 172 | 5 | 30 | 295 | 50 | 316 | 1.80e-45 | 157 |
| Msa0520420 | MtrunA17_Chr2g0321561 | 26.190 | 294 | 188 | 10 | 28 | 302 | 8 | 291 | 1.31e-19 | 87.0 |
| Msa0520420 | MtrunA17_Chr4g0049861 | 27.778 | 252 | 139 | 11 | 3 | 235 | 78 | 305 | 1.71e-12 | 67.4 |
| Msa0520420 | MtrunA17_Chr4g0026041 | 26.573 | 286 | 168 | 9 | 37 | 290 | 39 | 314 | 3.82e-12 | 66.2 |
| Msa0520420 | MtrunA17_Chr4g0049851 | 28.125 | 224 | 128 | 10 | 30 | 234 | 97 | 306 | 1.89e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0520420 | AT5G12040.1 | 86.139 | 303 | 42 | 0 | 8 | 310 | 67 | 369 | 0.0 | 536 |
| Msa0520420 | AT5G12040.2 | 86.222 | 225 | 31 | 0 | 8 | 232 | 67 | 291 | 6.32e-139 | 395 |
| Msa0520420 | AT4G08790.1 | 32.222 | 270 | 173 | 5 | 30 | 294 | 38 | 302 | 8.02e-41 | 144 |
| Msa0520420 | AT2G27450.1 | 26.132 | 287 | 183 | 10 | 35 | 302 | 16 | 292 | 8.81e-22 | 93.6 |
| Msa0520420 | AT2G27450.2 | 26.022 | 269 | 170 | 10 | 53 | 302 | 61 | 319 | 8.66e-19 | 85.5 |
| Msa0520420 | AT3G44310.1 | 29.412 | 289 | 155 | 11 | 25 | 277 | 21 | 296 | 1.79e-17 | 82.0 |
| Msa0520420 | AT3G44310.3 | 29.412 | 289 | 155 | 11 | 25 | 277 | 21 | 296 | 1.79e-17 | 82.0 |
| Msa0520420 | AT3G44320.1 | 26.480 | 321 | 172 | 13 | 25 | 301 | 21 | 321 | 2.17e-14 | 73.2 |
| Msa0520420 | AT3G44300.1 | 27.899 | 276 | 151 | 10 | 37 | 277 | 27 | 289 | 6.04e-14 | 72.0 |
| Msa0520420 | AT5G22300.1 | 26.910 | 301 | 171 | 11 | 37 | 301 | 45 | 332 | 1.10e-13 | 71.2 |
| Msa0520420 | AT5G64370.1 | 28.740 | 254 | 138 | 11 | 1 | 235 | 72 | 301 | 4.39e-12 | 66.6 |
| Msa0520420 | AT5G22300.2 | 25.974 | 231 | 134 | 8 | 94 | 301 | 23 | 239 | 7.70e-11 | 62.0 |
Find 119 sgRNAs with CRISPR-Local
Find 420 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGAATTTGTTAGGAAATT+TGG | 0.055698 | 3_4:+72963969 | Msa0520420:intron |
| GTTACTAGCATTTCTCAAAT+AGG | 0.209967 | 3_4:+72968741 | Msa0520420:three_prime_UTR |
| GCTCACTTGCTCTGCTATCC+TGG | 0.248326 | 3_4:+72965780 | Msa0520420:CDS |
| CACAGGCCGAAATGGATTAA+AGG | 0.259465 | 3_4:+72968919 | Msa0520420:three_prime_UTR |
| TACTGGTGGTTATGTGGCTT+GGG | 0.284257 | 3_4:+72968068 | Msa0520420:CDS |
| TATAACACTTGTTGTGTCTT+TGG | 0.284922 | 3_4:+72964151 | Msa0520420:CDS |
| TTTCTTTCAGTTCGAGGTTT+GGG | 0.289927 | 3_4:-72968656 | None:intergenic |
| CTTTCTTTCAGTTCGAGGTT+TGG | 0.295136 | 3_4:-72968657 | None:intergenic |
| GTGGCAGTTTGGAGAAGTTT+TGG | 0.305686 | 3_4:+72968273 | Msa0520420:intron |
| TTACTAGCATTTCTCAAATA+GGG | 0.312739 | 3_4:+72968742 | Msa0520420:three_prime_UTR |
| AAACACTACCTTACGGTGTT+TGG | 0.316443 | 3_4:-72964194 | None:intergenic |
| TTAAAACCTTTAATCCATTT+CGG | 0.316729 | 3_4:-72968925 | None:intergenic |
| GCGTATATCATTGCTAGTTC+TGG | 0.334972 | 3_4:-72965256 | None:intergenic |
| GTAATCGATTTCAGCTATAA+TGG | 0.341614 | 3_4:-72968320 | None:intergenic |
| GAGAAGGTGAAGAGTGGATT+TGG | 0.358364 | 3_4:-72963523 | None:intergenic |
| TGAAAGAAAGAAAGAAATAA+AGG | 0.359160 | 3_4:+72968670 | Msa0520420:three_prime_UTR |
| GGAAAACTATCATTTGAATA+AGG | 0.365261 | 3_4:-72963998 | None:intergenic |
| TAGGCATATGCTATGACATT+AGG | 0.366303 | 3_4:+72965230 | Msa0520420:CDS |
| CTTTCATTTCAGTTCAAGAT+TGG | 0.367269 | 3_4:+72963772 | Msa0520420:intron |
| GGTTCTATTCCTGAACGTTC+TGG | 0.367317 | 3_4:+72964118 | Msa0520420:CDS |
| CTCACTTGCTCTGCTATCCT+GGG | 0.376833 | 3_4:+72965781 | Msa0520420:CDS |
| GGAGTGGGCAAGGGAATTGC+GGG | 0.385327 | 3_4:-72963599 | None:intergenic |
| TGGGGTCACTCCACTCTTGT+TGG | 0.388298 | 3_4:+72968087 | Msa0520420:CDS |
| GTCAGATTCACAGGCCGAAA+TGG | 0.396742 | 3_4:+72968911 | Msa0520420:three_prime_UTR |
| TCTTTCTTTCTTTCAGTTCG+AGG | 0.398289 | 3_4:-72968662 | None:intergenic |
| TTCAATGAAGGTAATCTTCC+CGG | 0.401110 | 3_4:-72964578 | None:intergenic |
| TGAAATCGATTACTCAATAC+TGG | 0.406044 | 3_4:+72968330 | Msa0520420:CDS |
| AGGATCAGGCTATGAGGAAT+TGG | 0.408561 | 3_4:+72968871 | Msa0520420:three_prime_UTR |
| CTACTGGTGGTTATGTGGCT+TGG | 0.411153 | 3_4:+72968067 | Msa0520420:CDS |
| ATGATGAATTTATTCACAAC+TGG | 0.416665 | 3_4:-72968988 | None:intergenic |
| TTTGTTGTTAATTGTGATCA+TGG | 0.420555 | 3_4:+72968719 | Msa0520420:three_prime_UTR |
| TTGCAGGGCTACAGATAATC+AGG | 0.423169 | 3_4:+72967453 | Msa0520420:intron |
| ACGTGCTAATTCTGAATTGA+TGG | 0.426230 | 3_4:-72963570 | None:intergenic |
| TCAATATCCTCAGCATAAAC+AGG | 0.430758 | 3_4:-72964019 | None:intergenic |
| GCGAGGTGATCTTTATCAAT+TGG | 0.430848 | 3_4:+72968492 | Msa0520420:CDS |
| CTCTTCACCTTCTCCAATCA+TGG | 0.433155 | 3_4:+72963532 | Msa0520420:exon |
| GATGATGAAGCAGCCATGAT+TGG | 0.453282 | 3_4:-72963545 | None:intergenic |
| GGCAACCTGTTCACCTGCTC+GGG | 0.456621 | 3_4:+72968041 | Msa0520420:CDS |
| AGCATTTCTCAAATAGGGAT+TGG | 0.468207 | 3_4:+72968747 | Msa0520420:three_prime_UTR |
| TGGCAACCTGTTCACCTGCT+CGG | 0.470658 | 3_4:+72968040 | Msa0520420:CDS |
| GAGCGGGACTTCTATATTTG+AGG | 0.471290 | 3_4:+72968547 | Msa0520420:three_prime_UTR |
| GTGAATTATGTCGTCTTCAC+AGG | 0.474233 | 3_4:+72968851 | Msa0520420:three_prime_UTR |
| AGTATCCCGAGCAGGTGAAC+AGG | 0.475481 | 3_4:-72968046 | None:intergenic |
| GGTGAGAGGTGGAGTGGGCA+AGG | 0.478785 | 3_4:-72963609 | None:intergenic |
| TGACAACTGGTCCATTGCAT+TGG | 0.478887 | 3_4:+72965814 | Msa0520420:CDS |
| ATTCAAGACGCTGCTGCAAA+GGG | 0.480808 | 3_4:+72963856 | Msa0520420:CDS |
| GAATCATTGACTCTTACTGC+TGG | 0.481952 | 3_4:+72964598 | Msa0520420:CDS |
| GACAACTGGTCCATTGCATT+GGG | 0.485675 | 3_4:+72965815 | Msa0520420:CDS |
| CATACAGAGGTTGGACGCAT+TGG | 0.490536 | 3_4:+72965205 | Msa0520420:intron |
| TATGTCGTCTTCACAGGATC+AGG | 0.493139 | 3_4:+72968857 | Msa0520420:three_prime_UTR |
| TTGAAAATTACCATCGTTGG+TGG | 0.494901 | 3_4:+72964097 | Msa0520420:CDS |
| TATTCAAGACGCTGCTGCAA+AGG | 0.495759 | 3_4:+72963855 | Msa0520420:CDS |
| GGATACTACTGGTGGTTATG+TGG | 0.495937 | 3_4:+72968062 | Msa0520420:CDS |
| AGACCTGTGTCAACAATTGT+TGG | 0.497826 | 3_4:-72964628 | None:intergenic |
| TCACCTGCTCGGGATACTAC+TGG | 0.502215 | 3_4:+72968051 | Msa0520420:CDS |
| CCTCGCCGTTGCTTAGTCAC+AGG | 0.504775 | 3_4:-72968475 | None:intergenic |
| TCAATGAAGGTAATCTTCCC+GGG | 0.505609 | 3_4:-72964577 | None:intergenic |
| ACTCTCAGTCACCTCCGATA+AGG | 0.512664 | 3_4:+72963804 | Msa0520420:CDS |
| GAGGCTGAATTCCAACTGAA+TGG | 0.513087 | 3_4:+72968525 | Msa0520420:exon |
| CATCCAATTACCATAAAAGA+TGG | 0.518222 | 3_4:-72968611 | None:intergenic |
| AATCATTGACTCTTACTGCT+GGG | 0.519165 | 3_4:+72964599 | Msa0520420:CDS |
| AGTAGACTCATGCAGTTGAA+TGG | 0.522069 | 3_4:+72969075 | Msa0520420:three_prime_UTR |
| TGGAGTGGGCAAGGGAATTG+CGG | 0.522797 | 3_4:-72963600 | None:intergenic |
| AATCGATCTCCAGAACGTTC+AGG | 0.523578 | 3_4:-72964127 | None:intergenic |
| GAATTCCAACTGAATGGAGC+GGG | 0.530118 | 3_4:+72968531 | Msa0520420:exon |
| TGTTGTGTCTTTGGCACCGA+CGG | 0.531168 | 3_4:+72964160 | Msa0520420:CDS |
| GGGAGTTATTGCAGAGGGCA+AGG | 0.531735 | 3_4:+72965835 | Msa0520420:CDS |
| TACATATTCTGTTAAATCAA+AGG | 0.534072 | 3_4:-72969037 | None:intergenic |
| ACAACATATGTCAGATTCAC+AGG | 0.535017 | 3_4:+72968902 | Msa0520420:three_prime_UTR |
| TGCAATAACTCCCAATGCAA+TGG | 0.535233 | 3_4:-72965825 | None:intergenic |
| TATTCTGTTAAATCAAAGGA+TGG | 0.537361 | 3_4:-72969033 | None:intergenic |
| TCATTTCCGACAGTTATATG+TGG | 0.544179 | 3_4:+72968020 | Msa0520420:intron |
| AAGAGTCAATGATTCAATGA+AGG | 0.545334 | 3_4:-72964590 | None:intergenic |
| AATGAACTTGACATAAGTAC+AGG | 0.545497 | 3_4:+72968795 | Msa0520420:three_prime_UTR |
| TTGTTGAAAATTACCATCGT+TGG | 0.550102 | 3_4:+72964094 | Msa0520420:CDS |
| GAGGTTGGACGCATTGGCAT+AGG | 0.552435 | 3_4:+72965211 | Msa0520420:intron |
| GTGAGAGGTGGAGTGGGCAA+GGG | 0.553132 | 3_4:-72963608 | None:intergenic |
| TATGCTGAGGATATTGATGC+TGG | 0.554816 | 3_4:+72964025 | Msa0520420:CDS |
| GAAGTCCCGCTCCATTCAGT+TGG | 0.559358 | 3_4:-72968536 | None:intergenic |
| ATCAATTGGTAGATTTGCAG+AGG | 0.563090 | 3_4:+72968506 | Msa0520420:CDS |
| GCCTTGGTGAGAGGTGGAGT+GGG | 0.566886 | 3_4:-72963614 | None:intergenic |
| CTGGTGCAAGTATGCTCTGA+GGG | 0.566903 | 3_4:-72968969 | None:intergenic |
| CTTCACAGGATCAGGCTATG+AGG | 0.569604 | 3_4:+72968865 | Msa0520420:three_prime_UTR |
| CTCGCCGTTGCTTAGTCACA+GGG | 0.581681 | 3_4:-72968474 | None:intergenic |
| ACTCAAAGCCAAACACCGTA+AGG | 0.582233 | 3_4:+72964186 | Msa0520420:CDS |
| GCATTGGGAGTTATTGCAGA+GGG | 0.584269 | 3_4:+72965830 | Msa0520420:CDS |
| ATGCTGTATTATTGATGATG+TGG | 0.585097 | 3_4:+72968631 | Msa0520420:three_prime_UTR |
| AAGTTCAGAAAGCATAGCAG+TGG | 0.587368 | 3_4:-72964065 | None:intergenic |
| ATCATTGACTCTTACTGCTG+GGG | 0.591521 | 3_4:+72964600 | Msa0520420:CDS |
| ACTCAATACTGGAACAGAGA+AGG | 0.592203 | 3_4:+72968341 | Msa0520420:CDS |
| GCATGTGCATGCTTCTTACA+AGG | 0.595540 | 3_4:-72968589 | None:intergenic |
| GTTGTCATGTTAAAAGCCCC+AGG | 0.595642 | 3_4:-72965798 | None:intergenic |
| ACTGGTGGTTATGTGGCTTG+GGG | 0.596481 | 3_4:+72968069 | Msa0520420:CDS |
| TCAGAAAGCATAGCAGTGGA+AGG | 0.605347 | 3_4:-72964061 | None:intergenic |
| TGCCTTGGTGAGAGGTGGAG+TGG | 0.608042 | 3_4:-72963615 | None:intergenic |
| GTGGGCAAGGGAATTGCGGG+TGG | 0.616233 | 3_4:-72963596 | None:intergenic |
| TTTGGCTACTACAGAACATG+AGG | 0.618125 | 3_4:+72968291 | Msa0520420:CDS |
| CCACCAGTAGTATCCCGAGC+AGG | 0.621880 | 3_4:-72968054 | None:intergenic |
| TGAATTCCAACTGAATGGAG+CGG | 0.625310 | 3_4:+72968530 | Msa0520420:exon |
| TGATTGGAGAAGGTGAAGAG+TGG | 0.628575 | 3_4:-72963529 | None:intergenic |
| GCAATGATATACGCAGCAAG+AGG | 0.636279 | 3_4:+72965265 | Msa0520420:CDS |
| GAACTTGCCTTGGTGAGAGG+TGG | 0.636590 | 3_4:-72963620 | None:intergenic |
| ACTTACAGGACCAACAAGAG+TGG | 0.638636 | 3_4:-72968097 | None:intergenic |
| TCACTTGCTCTGCTATCCTG+GGG | 0.646670 | 3_4:+72965782 | Msa0520420:CDS |
| GAAGCAGCCATGATTGGAGA+AGG | 0.650436 | 3_4:-72963539 | None:intergenic |
| TGGGAACTTGCCTTGGTGAG+AGG | 0.650451 | 3_4:-72963623 | None:intergenic |
| AGACTCATGCAGTTGAATGG+AGG | 0.651457 | 3_4:+72969078 | Msa0520420:three_prime_UTR |
| GCCGTTGCTTAGTCACAGGG+AGG | 0.656884 | 3_4:-72968471 | None:intergenic |
| GCCCACTCCACCTCTCACCA+AGG | 0.660351 | 3_4:+72963613 | Msa0520420:CDS |
| TGCATTGGGAGTTATTGCAG+AGG | 0.666442 | 3_4:+72965829 | Msa0520420:CDS |
| CCTGCTCGGGATACTACTGG+TGG | 0.671904 | 3_4:+72968054 | Msa0520420:CDS |
| ACCTCCCTGTGACTAAGCAA+CGG | 0.673427 | 3_4:+72968470 | Msa0520420:CDS |
| ACTCCAACAATTGTTGACAC+AGG | 0.676568 | 3_4:+72964625 | Msa0520420:CDS |
| CAATGAAGGTAATCTTCCCG+GGG | 0.685426 | 3_4:-72964576 | None:intergenic |
| AGGAATAGAACCACCAACGA+TGG | 0.688450 | 3_4:-72964107 | None:intergenic |
| ACTTGACATAAGTACAGGAG+TGG | 0.689341 | 3_4:+72968800 | Msa0520420:three_prime_UTR |
| ACTGGTGCAAGTATGCTCTG+AGG | 0.692724 | 3_4:-72968970 | None:intergenic |
| GCTGAGGATATTGATGCTGG+TGG | 0.700623 | 3_4:+72964028 | Msa0520420:CDS |
| CCTGTGACTAAGCAACGGCG+AGG | 0.768237 | 3_4:+72968475 | Msa0520420:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAGTTTTATTTTATTTTATT+TGG | + | chr3_4:72963903-72963922 | Msa0520420:intron | 10.0% |
| !! | AAATAAACTTATTTATTCTT+TGG | + | chr3_4:72965558-72965577 | Msa0520420:intron | 10.0% |
| !!! | TATTTTTAATTACAAATAGA+AGG | + | chr3_4:72968195-72968214 | Msa0520420:intron | 10.0% |
| !! | TAAAATAAAATAAAACTCAC+AGG | - | chr3_4:72963901-72963920 | None:intergenic | 15.0% |
| !! | AAAATGTTATTAATATCGAA+TGG | + | chr3_4:72964780-72964799 | Msa0520420:intron | 15.0% |
| !!! | TTTTGTGTAATTCTTATTTT+GGG | + | chr3_4:72965469-72965488 | Msa0520420:intron | 15.0% |
| !! | TTATTATTATTTGATTACTC+AGG | + | chr3_4:72968443-72968462 | Msa0520420:intron | 15.0% |
| !!! | TTTGGAATTTTGAATTTGTT+AGG | + | chr3_4:72963961-72963980 | Msa0520420:intron | 20.0% |
| !!! | TTTGAATTTGTTAGGAAATT+TGG | + | chr3_4:72963969-72963988 | Msa0520420:intron | 20.0% |
| !!! | AGAAGAAAATTTGTTGTTAT+AGG | + | chr3_4:72964275-72964294 | Msa0520420:intron | 20.0% |
| !! | ATATTGAAACAGATAAAACT+GGG | - | chr3_4:72964689-72964708 | None:intergenic | 20.0% |
| !! | TATATTGAAACAGATAAAAC+TGG | - | chr3_4:72964690-72964709 | None:intergenic | 20.0% |
| !!! | AACATACTCATCAAATTTTA+CGG | - | chr3_4:72965004-72965023 | None:intergenic | 20.0% |
| !! | TAGTAAACTAATTGCAATAA+TGG | + | chr3_4:72965175-72965194 | Msa0520420:intron | 20.0% |
| !! | AGTAAACTAATTGCAATAAT+GGG | + | chr3_4:72965176-72965195 | Msa0520420:intron | 20.0% |
| !! | TGCTAAAATAACTTATTAAG+AGG | - | chr3_4:72965387-72965406 | None:intergenic | 20.0% |
| !!! | ATAAGTTATTTTAGCATTGT+TGG | + | chr3_4:72965391-72965410 | Msa0520420:intron | 20.0% |
| !!! | CTTTTGTGTAATTCTTATTT+TGG | + | chr3_4:72965468-72965487 | Msa0520420:intron | 20.0% |
| !! | TGTAGTATAATATTTGTTTC+AGG | - | chr3_4:72965895-72965914 | None:intergenic | 20.0% |
| !!! | AAAAACTGTTTTGAGTTTTA+AGG | + | chr3_4:72965992-72966011 | Msa0520420:intron | 20.0% |
| !! | GAAAAAAGAAACAAGAATTA+GGG | - | chr3_4:72966225-72966244 | None:intergenic | 20.0% |
| !! | TGAAAAAAGAAACAAGAATT+AGG | - | chr3_4:72966226-72966245 | None:intergenic | 20.0% |
| !!! | AAATTTTTTACAAAAGAGTC+GGG | - | chr3_4:72966395-72966414 | None:intergenic | 20.0% |
| !!! | GAAATTTTTTACAAAAGAGT+CGG | - | chr3_4:72966396-72966415 | None:intergenic | 20.0% |
| !!! | CTGTATTTATAATTTGCATT+AGG | + | chr3_4:72966463-72966482 | Msa0520420:intron | 20.0% |
| !!! | TAATTTGCATTAGGAATTTA+TGG | + | chr3_4:72966472-72966491 | Msa0520420:intron | 20.0% |
| !! | AATATGATGTTTATTGTGAA+CGG | - | chr3_4:72966932-72966951 | None:intergenic | 20.0% |
| !! | TTCACAATAAACATCATATT+GGG | + | chr3_4:72966932-72966951 | Msa0520420:intron | 20.0% |
| !!! | ATGTCTTTTGCTTATTTATT+TGG | + | chr3_4:72967551-72967570 | Msa0520420:intron | 20.0% |
| !!! | AATCAAAGTTACGTTTTTAA+AGG | - | chr3_4:72967608-72967627 | None:intergenic | 20.0% |
| !! | TTAAAAACGTAACTTTGATT+TGG | + | chr3_4:72967608-72967627 | Msa0520420:intron | 20.0% |
| !!! | TAAAAACGTAACTTTGATTT+GGG | + | chr3_4:72967609-72967628 | Msa0520420:intron | 20.0% |
| !! | AATATCTTTAATTGTCAGTA+AGG | + | chr3_4:72968221-72968240 | Msa0520420:intron | 20.0% |
| !! | TGAAAGAAAGAAAGAAATAA+AGG | + | chr3_4:72968670-72968689 | Msa0520420:three_prime_UTR | 20.0% |
| !! | TTAAAACCTTTAATCCATTT+CGG | - | chr3_4:72968928-72968947 | None:intergenic | 20.0% |
| !! | TACATATTCTGTTAAATCAA+AGG | - | chr3_4:72969040-72969059 | None:intergenic | 20.0% |
| ! | TTGAATGTAATTACATGTGT+CGG | + | chr3_4:72963697-72963716 | Msa0520420:intron | 25.0% |
| ! | AAATGAAAGAAAAGAACATG+AGG | - | chr3_4:72963761-72963780 | None:intergenic | 25.0% |
| !!! | TTCTGAAATTAATCTGTGTT+TGG | + | chr3_4:72963943-72963962 | Msa0520420:intron | 25.0% |
| ! | GGAAAACTATCATTTGAATA+AGG | - | chr3_4:72964001-72964020 | None:intergenic | 25.0% |
| !!! | TTTGTTGTTATAGGATAGAT+TGG | + | chr3_4:72964284-72964303 | Msa0520420:intron | 25.0% |
| !! | TTGATTTTACATCATTCCAT+AGG | + | chr3_4:72964337-72964356 | Msa0520420:intron | 25.0% |
| ! | AATTAAGTTCAATATGACCT+AGG | - | chr3_4:72964906-72964925 | None:intergenic | 25.0% |
| !!! | GGTGTGTTTTTATTTAGTTA+CGG | + | chr3_4:72965031-72965050 | Msa0520420:intron | 25.0% |
| !!! | GTGTGTTTTTATTTAGTTAC+GGG | + | chr3_4:72965032-72965051 | Msa0520420:intron | 25.0% |
| ! | TAAAAATTAGATGACTCTTG+TGG | - | chr3_4:72965111-72965130 | None:intergenic | 25.0% |
| !! | GCAATTAGTTTACTAAAACA+TGG | - | chr3_4:72965170-72965189 | None:intergenic | 25.0% |
| !!! | ATTGTTTCTGAGCAAATTAA+TGG | - | chr3_4:72965301-72965320 | None:intergenic | 25.0% |
| !!! | GAGTAACAATTTTTTCCTAT+GGG | + | chr3_4:72965413-72965432 | Msa0520420:intron | 25.0% |
| !!! | AGTAACAATTTTTTCCTATG+GGG | + | chr3_4:72965414-72965433 | Msa0520420:intron | 25.0% |
| !! | ATCTGAACCAATTTCTTTTA+TGG | - | chr3_4:72965447-72965466 | None:intergenic | 25.0% |
| !!! | TTTTTCTTGTTCTTTAGCTT+TGG | + | chr3_4:72965724-72965743 | Msa0520420:intron | 25.0% |
| !!! | TTTTCTTGTTCTTTAGCTTT+GGG | + | chr3_4:72965725-72965744 | Msa0520420:intron | 25.0% |
| ! | TATTCTTATGCGATTTCTTT+AGG | + | chr3_4:72965932-72965951 | Msa0520420:intron | 25.0% |
| ! | ACTAGAACATACTATCATAT+TGG | + | chr3_4:72966095-72966114 | Msa0520420:intron | 25.0% |
| ! | CTAGAACATACTATCATATT+GGG | + | chr3_4:72966096-72966115 | Msa0520420:intron | 25.0% |
| ! | GAGTAACGAAAAATTAAACA+AGG | - | chr3_4:72966256-72966275 | None:intergenic | 25.0% |
| ! | AGGTGACACTAAAATATATT+CGG | - | chr3_4:72966523-72966542 | None:intergenic | 25.0% |
| ! | ATTGATTGAGAATAATGTGT+TGG | + | chr3_4:72966626-72966645 | Msa0520420:intron | 25.0% |
| ! | TTTCAGTATATCTAACCTAA+TGG | + | chr3_4:72966827-72966846 | Msa0520420:intron | 25.0% |
| ! | TTCAGTATATCTAACCTAAT+GGG | + | chr3_4:72966828-72966847 | Msa0520420:intron | 25.0% |
| ! | ATATGATGTTTATTGTGAAC+GGG | - | chr3_4:72966931-72966950 | None:intergenic | 25.0% |
| ! | GTTCACAATAAACATCATAT+TGG | + | chr3_4:72966931-72966950 | Msa0520420:intron | 25.0% |
| ! | TTCAGTATATCTAACCTAAT+GGG | - | chr3_4:72966828-72966847 | None:intergenic | 25.0% |
| ! | TTTCAGTATATCTAACCTAA+TGG | - | chr3_4:72966827-72966846 | None:intergenic | 25.0% |
| ! | ATCTGTTAAATTCCAACAAT+TGG | + | chr3_4:72967237-72967256 | Msa0520420:intron | 25.0% |
| ! | AAATTCCAACAATTGGTATT+AGG | + | chr3_4:72967244-72967263 | Msa0520420:intron | 25.0% |
| ! | AATTCCAACAATTGGTATTA+GGG | + | chr3_4:72967245-72967264 | Msa0520420:intron | 25.0% |
| ! | ATTGTAGATCATCATTATGT+TGG | - | chr3_4:72967403-72967422 | None:intergenic | 25.0% |
| ! | AGCAAAACACATATTAGAAA+TGG | - | chr3_4:72967426-72967445 | None:intergenic | 25.0% |
| !! | TCTTTTGCTTATTTATTTGG+TGG | + | chr3_4:72967554-72967573 | Msa0520420:intron | 25.0% |
| !!! | CGTTTTTAAAGGTCATTATA+TGG | - | chr3_4:72967597-72967616 | None:intergenic | 25.0% |
| !!! | AAAAACGTAACTTTGATTTG+GGG | + | chr3_4:72967610-72967629 | Msa0520420:intron | 25.0% |
| ! | TATAAATACACCAATCTGAA+AGG | - | chr3_4:72967765-72967784 | None:intergenic | 25.0% |
| !!! | TTCTATTCTATTTTTTCCCT+TGG | - | chr3_4:72967833-72967852 | None:intergenic | 25.0% |
| ! | CAATTCAACTTAAAATACCA+TGG | - | chr3_4:72967874-72967893 | None:intergenic | 25.0% |
| !!! | GTATTTTAAGTTGAATTGCT+GGG | + | chr3_4:72967876-72967895 | Msa0520420:intron | 25.0% |
| ! | TTGCAATTCACAATATACTA+TGG | - | chr3_4:72967962-72967981 | None:intergenic | 25.0% |
| ! | AACATAAAGGATATACTTAC+AGG | - | chr3_4:72968114-72968133 | None:intergenic | 25.0% |
| ! | CAAAAGAAAGCTAAACATAA+AGG | - | chr3_4:72968127-72968146 | None:intergenic | 25.0% |
| !!! | CTTTATGTTTAGCTTTCTTT+TGG | + | chr3_4:72968125-72968144 | Msa0520420:intron | 25.0% |
| !!! | TTTGTTGTTAATTGTGATCA+TGG | + | chr3_4:72968719-72968738 | Msa0520420:three_prime_UTR | 25.0% |
| ! | TTACTAGCATTTCTCAAATA+GGG | + | chr3_4:72968742-72968761 | Msa0520420:three_prime_UTR | 25.0% |
| !!! | AAGTTCATTTATTTTCTCAC+GGG | - | chr3_4:72968784-72968803 | None:intergenic | 25.0% |
| !!! | CAAGTTCATTTATTTTCTCA+CGG | - | chr3_4:72968785-72968804 | None:intergenic | 25.0% |
| !!! | GTTTTAAACTTACAATTTGC+AGG | + | chr3_4:72968941-72968960 | Msa0520420:three_prime_UTR | 25.0% |
| ! | ATGATGAATTTATTCACAAC+TGG | - | chr3_4:72968991-72969010 | None:intergenic | 25.0% |
| ! | TATTCTGTTAAATCAAAGGA+TGG | - | chr3_4:72969036-72969055 | None:intergenic | 25.0% |
| !! | GTTTTGTTGGAGAAAAGAAA+GGG | - | chr3_4:72963491-72963510 | None:intergenic | 30.0% |
| !!! | AGTTTTGTTGGAGAAAAGAA+AGG | - | chr3_4:72963492-72963511 | None:intergenic | 30.0% |
| CTTTCATTTCAGTTCAAGAT+TGG | + | chr3_4:72963772-72963791 | Msa0520420:intron | 30.0% | |
| TTGTTGAAAATTACCATCGT+TGG | + | chr3_4:72964094-72964113 | Msa0520420:CDS | 30.0% | |
| !! | TATAACACTTGTTGTGTCTT+TGG | + | chr3_4:72964151-72964170 | Msa0520420:CDS | 30.0% |
| TATGTTTGGATTCTTGGTAT+AGG | - | chr3_4:72964371-72964390 | None:intergenic | 30.0% | |
| !! | ATAGTCATTTTGATCCCTTA+GGG | - | chr3_4:72964394-72964413 | None:intergenic | 30.0% |
| !! | AATAGTCATTTTGATCCCTT+AGG | - | chr3_4:72964395-72964414 | None:intergenic | 30.0% |
| !! | AAAATGCCTAATACTGATTC+AGG | - | chr3_4:72964491-72964510 | None:intergenic | 30.0% |
| TTATGTAATTTCTGATGTGC+TGG | + | chr3_4:72964519-72964538 | Msa0520420:intron | 30.0% | |
| AAGAGTCAATGATTCAATGA+AGG | - | chr3_4:72964593-72964612 | None:intergenic | 30.0% | |
| TGGGAAACAAATGTCTAAAT+TGG | - | chr3_4:72964670-72964689 | None:intergenic | 30.0% | |
| AATGAAAGTTGTTATCCGTA+TGG | + | chr3_4:72964828-72964847 | Msa0520420:intron | 30.0% | |
| AATCGAATTGTACAACCATA+CGG | - | chr3_4:72964846-72964865 | None:intergenic | 30.0% | |
| GTCATATTGAACTTAATTGC+CGG | + | chr3_4:72964908-72964927 | Msa0520420:intron | 30.0% | |
| TCATATTGAACTTAATTGCC+GGG | + | chr3_4:72964909-72964928 | Msa0520420:intron | 30.0% | |
| TCAATCACTATTTGCACATA+AGG | - | chr3_4:72964943-72964962 | None:intergenic | 30.0% | |
| !! | GTTTTTATTTAGTTACGGGA+AGG | + | chr3_4:72965036-72965055 | Msa0520420:intron | 30.0% |
| ACTAAAACATGGAAAATCGA+TGG | - | chr3_4:72965159-72965178 | None:intergenic | 30.0% | |
| !!! | GGAGTAACAATTTTTTCCTA+TGG | + | chr3_4:72965412-72965431 | Msa0520420:intron | 30.0% |
| !!! | GTAACAATTTTTTCCTATGG+GGG | + | chr3_4:72965415-72965434 | Msa0520420:intron | 30.0% |
| GTGGATACCATAAAAGAAAT+TGG | + | chr3_4:72965437-72965456 | Msa0520420:intron | 30.0% | |
| ! | AGAACAATGCAGTTTAAGTT+TGG | - | chr3_4:72965699-72965718 | None:intergenic | 30.0% |
| !! | TTTCTTGTTCTTTAGCTTTG+GGG | + | chr3_4:72965726-72965745 | Msa0520420:intron | 30.0% |
| ! | GACTTACAATATTCAGCTTT+TGG | + | chr3_4:72965749-72965768 | Msa0520420:intron | 30.0% |
| ATCACAAGAAAATAGCATTC+TGG | - | chr3_4:72965961-72965980 | None:intergenic | 30.0% | |
| !!! | GAATGCTATTTTCTTGTGAT+AGG | + | chr3_4:72965961-72965980 | Msa0520420:intron | 30.0% |
| !!! | TTTGAGTTTTAAGGTTCTCA+TGG | + | chr3_4:72966001-72966020 | Msa0520420:intron | 30.0% |
| !!! | TTGAGTTTTAAGGTTCTCAT+GGG | + | chr3_4:72966002-72966021 | Msa0520420:intron | 30.0% |
| ! | ATAGTATGTTCTAGTTGTTG+CGG | - | chr3_4:72966090-72966109 | None:intergenic | 30.0% |
| !!! | GAATTTTGGAGTTAACCAAT+TGG | - | chr3_4:72966128-72966147 | None:intergenic | 30.0% |
| TAGCAACGAAAAAGTGAATT+AGG | - | chr3_4:72966181-72966200 | None:intergenic | 30.0% | |
| AAAGAAACAAGAATTAGGGA+GGG | - | chr3_4:72966221-72966240 | None:intergenic | 30.0% | |
| AAAAGAAACAAGAATTAGGG+AGG | - | chr3_4:72966222-72966241 | None:intergenic | 30.0% | |
| ATGGATGTAACTACTAACTA+GGG | - | chr3_4:72966418-72966437 | None:intergenic | 30.0% | |
| ATGGGATAAAACAAAGAGAA+AGG | - | chr3_4:72966543-72966562 | None:intergenic | 30.0% | |
| AATGTGTTGGAATTTAACAG+AGG | + | chr3_4:72966639-72966658 | Msa0520420:intron | 30.0% | |
| AGTAACAGCTCATCAATAAA+AGG | - | chr3_4:72966799-72966818 | None:intergenic | 30.0% | |
| CATATATAAGTCATCCCATT+AGG | - | chr3_4:72966845-72966864 | None:intergenic | 30.0% | |
| ATGAACAACTTAACACATCA+CGG | - | chr3_4:72966974-72966993 | None:intergenic | 30.0% | |
| ATAGAGACTTGGGAAAATTA+GGG | - | chr3_4:72967129-72967148 | None:intergenic | 30.0% | |
| TACCAAACCAAAAATTCCTA+AGG | + | chr3_4:72967672-72967691 | Msa0520420:intron | 30.0% | |
| TAAAACCTCTGCAACATATA+CGG | - | chr3_4:72967794-72967813 | None:intergenic | 30.0% | |
| TTGAGAAATAGAATTTGCCA+TGG | + | chr3_4:72967854-72967873 | Msa0520420:intron | 30.0% | |
| !!! | GGTATTTTAAGTTGAATTGC+TGG | + | chr3_4:72967875-72967894 | Msa0520420:intron | 30.0% |
| TTGATTGTGTGATTAAAGCT+GGG | + | chr3_4:72967909-72967928 | Msa0520420:intron | 30.0% | |
| GCATAGTCAGCATATTTAAA+TGG | - | chr3_4:72968156-72968175 | None:intergenic | 30.0% | |
| TAAGGCACAAAAACTTATTG+TGG | + | chr3_4:72968239-72968258 | Msa0520420:intron | 30.0% | |
| ! | GTAATCGATTTCAGCTATAA+TGG | - | chr3_4:72968323-72968342 | None:intergenic | 30.0% |
| TGAAATCGATTACTCAATAC+TGG | + | chr3_4:72968330-72968349 | Msa0520420:CDS | 30.0% | |
| TGCAAGATATTGTAGTTTGA+AGG | - | chr3_4:72968375-72968394 | None:intergenic | 30.0% | |
| !! | TCTTGCACATGTTTAACTTT+TGG | + | chr3_4:72968388-72968407 | Msa0520420:intron | 30.0% |
| ! | ATGCCATCTTTTATGGTAAT+TGG | + | chr3_4:72968608-72968627 | Msa0520420:three_prime_UTR | 30.0% |
| CATCCAATTACCATAAAAGA+TGG | - | chr3_4:72968614-72968633 | None:intergenic | 30.0% | |
| !! | ATGCTGTATTATTGATGATG+TGG | + | chr3_4:72968631-72968650 | Msa0520420:three_prime_UTR | 30.0% |
| GTTACTAGCATTTCTCAAAT+AGG | + | chr3_4:72968741-72968760 | Msa0520420:three_prime_UTR | 30.0% | |
| AATGAACTTGACATAAGTAC+AGG | + | chr3_4:72968795-72968814 | Msa0520420:three_prime_UTR | 30.0% | |
| AGTTGAATGGAGGATAAAAA+TGG | + | chr3_4:72969088-72969107 | Msa0520420:three_prime_UTR | 30.0% | |
| GTTGAATGGAGGATAAAAAT+GGG | + | chr3_4:72969089-72969108 | Msa0520420:three_prime_UTR | 30.0% | |
| ACGTGCTAATTCTGAATTGA+TGG | - | chr3_4:72963573-72963592 | None:intergenic | 35.0% | |
| CAATTATGTCAGTATCAGTG+TGG | - | chr3_4:72963680-72963699 | None:intergenic | 35.0% | |
| GAGAGTAAGTGTAGCATTAA+AGG | - | chr3_4:72963735-72963754 | None:intergenic | 35.0% | |
| !! | TGCGATGTTTTTGTCCTTAT+CGG | - | chr3_4:72963821-72963840 | None:intergenic | 35.0% |
| ! | TAGTTTTCCTGTTTATGCTG+AGG | + | chr3_4:72964012-72964031 | Msa0520420:CDS | 35.0% |
| TCAATATCCTCAGCATAAAC+AGG | - | chr3_4:72964022-72964041 | None:intergenic | 35.0% | |
| TTGAAAATTACCATCGTTGG+TGG | + | chr3_4:72964097-72964116 | Msa0520420:CDS | 35.0% | |
| TGTTATAGGATAGATTGGAG+TGG | + | chr3_4:72964289-72964308 | Msa0520420:intron | 35.0% | |
| TTAGGGTATGTTTGGATTCT+TGG | - | chr3_4:72964377-72964396 | None:intergenic | 35.0% | |
| AAGAATCCAAACATACCCTA+AGG | + | chr3_4:72964376-72964395 | Msa0520420:intron | 35.0% | |
| AGAATCCAAACATACCCTAA+GGG | + | chr3_4:72964377-72964396 | Msa0520420:intron | 35.0% | |
| TCACAATCCAAATTCTCTTC+AGG | - | chr3_4:72964462-72964481 | None:intergenic | 35.0% | |
| GTCATACCTGAATCAGTATT+AGG | + | chr3_4:72964482-72964501 | Msa0520420:intron | 35.0% | |
| ! | CTTTTTGATATTGACATCCC+CGG | + | chr3_4:72964559-72964578 | Msa0520420:CDS | 35.0% |
| ! | TTTTTGATATTGACATCCCC+GGG | + | chr3_4:72964560-72964579 | Msa0520420:CDS | 35.0% |
| TTCAATGAAGGTAATCTTCC+CGG | - | chr3_4:72964581-72964600 | None:intergenic | 35.0% | |
| !! | AATCATTGACTCTTACTGCT+GGG | + | chr3_4:72964599-72964618 | Msa0520420:CDS | 35.0% |
| ATGATTGATTACAAACGCAG+TGG | - | chr3_4:72964732-72964751 | None:intergenic | 35.0% | |
| AGGATGACTTTGTTGAAACT+AGG | + | chr3_4:72964973-72964992 | Msa0520420:intron | 35.0% | |
| TTGATGAGTATGTTCACTCA+AGG | + | chr3_4:72965010-72965029 | Msa0520420:intron | 35.0% | |
| TAATGGGATGATTCATACAG+AGG | + | chr3_4:72965192-72965211 | Msa0520420:intron | 35.0% | |
| TAGGCATATGCTATGACATT+AGG | + | chr3_4:72965230-72965249 | Msa0520420:CDS | 35.0% | |
| CAAAATCATTCCCAGTCAAA+TGG | - | chr3_4:72965339-72965358 | None:intergenic | 35.0% | |
| GAGGCATGAATGAAAAACAT+TGG | - | chr3_4:72965368-72965387 | None:intergenic | 35.0% | |
| CAACTGGAGAATTAATCTCA+AGG | - | chr3_4:72965663-72965682 | None:intergenic | 35.0% | |
| TGGAAACAAATCAACTCAAC+TGG | - | chr3_4:72965679-72965698 | None:intergenic | 35.0% | |
| !! | TTCTTGTTCTTTAGCTTTGG+GGG | + | chr3_4:72965727-72965746 | Msa0520420:intron | 35.0% |
| !!! | AATATTCAGCTTTTGGCTTC+AGG | + | chr3_4:72965756-72965775 | Msa0520420:intron | 35.0% |
| !!! | TGAGTTTTAAGGTTCTCATG+GGG | + | chr3_4:72966003-72966022 | Msa0520420:intron | 35.0% |
| CAACGAAAAAGTGAATTAGG+AGG | - | chr3_4:72966178-72966197 | None:intergenic | 35.0% | |
| ! | GGGTTTATAGTGGTTATTTC+TGG | - | chr3_4:72966375-72966394 | None:intergenic | 35.0% |
| GATGGATGTAACTACTAACT+AGG | - | chr3_4:72966419-72966438 | None:intergenic | 35.0% | |
| GAACTGTCAGTCTAATTTGA+TGG | - | chr3_4:72966437-72966456 | None:intergenic | 35.0% | |
| !! | TGTTTCTAGCACTGAAGATA+AGG | - | chr3_4:72966584-72966603 | None:intergenic | 35.0% |
| CTTATATATGCCCATTAGTG+AGG | + | chr3_4:72966855-72966874 | Msa0520420:intron | 35.0% | |
| !!! | TTTTTAGTTAGCCCATTGAG+AGG | - | chr3_4:72966887-72966906 | None:intergenic | 35.0% |
| ATATTGGGCGTTATTGTGAA+CGG | + | chr3_4:72966947-72966966 | Msa0520420:intron | 35.0% | |
| !!! | ATTTTAGTTAGCCCATTGAG+AGG | + | chr3_4:72966992-72967011 | Msa0520420:intron | 35.0% |
| TATAATCTAGCCATCCCATT+AGG | + | chr3_4:72967037-72967056 | Msa0520420:intron | 35.0% | |
| GTATATCTAACCTAATGGGA+TGG | - | chr3_4:72966832-72966851 | None:intergenic | 35.0% | |
| TAGAGACTTGGGAAAATTAG+GGG | - | chr3_4:72967128-72967147 | None:intergenic | 35.0% | |
| CATAGAGACTTGGGAAAATT+AGG | - | chr3_4:72967130-72967149 | None:intergenic | 35.0% | |
| ! | CTAATTTTCCCAAGTCTCTA+TGG | + | chr3_4:72967128-72967147 | Msa0520420:intron | 35.0% |
| TGAAGAATCCATAGAGACTT+GGG | - | chr3_4:72967139-72967158 | None:intergenic | 35.0% | |
| AACCATACAACAGATCTAGT+TGG | - | chr3_4:72967271-72967290 | None:intergenic | 35.0% | |
| TGAATGCAGTAATAATCCAC+AGG | - | chr3_4:72967503-72967522 | None:intergenic | 35.0% | |
| !!! | CTCCTTAGGAATTTTTGGTT+TGG | - | chr3_4:72967677-72967696 | None:intergenic | 35.0% |
| ! | CTGAACTCCTTAGGAATTTT+TGG | - | chr3_4:72967682-72967701 | None:intergenic | 35.0% |
| ATATTCATGCTGAACTCCTT+AGG | - | chr3_4:72967691-72967710 | None:intergenic | 35.0% | |
| !! | TTAAGTTGAATTGCTGGGAT+TGG | + | chr3_4:72967881-72967900 | Msa0520420:intron | 35.0% |
| GTTGATTGTGTGATTAAAGC+TGG | + | chr3_4:72967908-72967927 | Msa0520420:intron | 35.0% | |
| !! | ATTAAAGCTGGGTTTTAGTG+AGG | + | chr3_4:72967920-72967939 | Msa0520420:intron | 35.0% |
| !!! | GTTTTATGCTCTGAGATAAG+TGG | + | chr3_4:72967983-72968002 | Msa0520420:intron | 35.0% |
| TCATTTCCGACAGTTATATG+TGG | + | chr3_4:72968020-72968039 | Msa0520420:intron | 35.0% | |
| ! | AATATGCTGACTATGCAAGT+TGG | + | chr3_4:72968160-72968179 | Msa0520420:intron | 35.0% |
| TATTGTGGACCATATCAATG+TGG | + | chr3_4:72968254-72968273 | Msa0520420:intron | 35.0% | |
| ATCAATTGGTAGATTTGCAG+AGG | + | chr3_4:72968506-72968525 | Msa0520420:CDS | 35.0% | |
| TTTCTTTCAGTTCGAGGTTT+GGG | - | chr3_4:72968659-72968678 | None:intergenic | 35.0% | |
| TCTTTCTTTCTTTCAGTTCG+AGG | - | chr3_4:72968665-72968684 | None:intergenic | 35.0% | |
| AGCATTTCTCAAATAGGGAT+TGG | + | chr3_4:72968747-72968766 | Msa0520420:three_prime_UTR | 35.0% | |
| ACAACATATGTCAGATTCAC+AGG | + | chr3_4:72968902-72968921 | Msa0520420:three_prime_UTR | 35.0% | |
| AATGGAGGATAAAAATGGGT+CGG | + | chr3_4:72969093-72969112 | Msa0520420:three_prime_UTR | 35.0% | |
| !!! | TGAAGATTCGTTTTCGAGTG+TGG | - | chr3_4:72963463-72963482 | None:intergenic | 40.0% |
| !! | GCGAAAGAAGAGAGTTTTGT+TGG | - | chr3_4:72963504-72963523 | None:intergenic | 40.0% |
| GTGTCAGTGCTAAAGAGAAT+GGG | - | chr3_4:72963645-72963664 | None:intergenic | 40.0% | |
| TGTGTCAGTGCTAAAGAGAA+TGG | - | chr3_4:72963646-72963665 | None:intergenic | 40.0% | |
| ! | TGTAGCATTAAAGGTGTGTC+CGG | - | chr3_4:72963726-72963745 | None:intergenic | 40.0% |
| !! | GATGTTTTTGTCCTTATCGG+AGG | - | chr3_4:72963818-72963837 | None:intergenic | 40.0% |
| TATGCTGAGGATATTGATGC+TGG | + | chr3_4:72964025-72964044 | Msa0520420:CDS | 40.0% | |
| ! | AAGTTCAGAAAGCATAGCAG+TGG | - | chr3_4:72964068-72964087 | None:intergenic | 40.0% |
| !!! | TTTGGCTTTGAGTTTTCCGT+CGG | - | chr3_4:72964179-72964198 | None:intergenic | 40.0% |
| AAACACTACCTTACGGTGTT+TGG | - | chr3_4:72964197-72964216 | None:intergenic | 40.0% | |
| TTCCCACAAACACTACCTTA+CGG | - | chr3_4:72964204-72964223 | None:intergenic | 40.0% | |
| TTGATCCCTTAGGGTATGTT+TGG | - | chr3_4:72964385-72964404 | None:intergenic | 40.0% | |
| ATCCAAATTCTCTTCAGGTG+TGG | - | chr3_4:72964457-72964476 | None:intergenic | 40.0% | |
| TCAATGAAGGTAATCTTCCC+GGG | - | chr3_4:72964580-72964599 | None:intergenic | 40.0% | |
| !! | GAATCATTGACTCTTACTGC+TGG | + | chr3_4:72964598-72964617 | Msa0520420:CDS | 40.0% |
| !! | ATCATTGACTCTTACTGCTG+GGG | + | chr3_4:72964600-72964619 | Msa0520420:CDS | 40.0% |
| ACTCCAACAATTGTTGACAC+AGG | + | chr3_4:72964625-72964644 | Msa0520420:CDS | 40.0% | |
| AGACCTGTGTCAACAATTGT+TGG | - | chr3_4:72964631-72964650 | None:intergenic | 40.0% | |
| CAAACGCAGTGGTAGAATAA+AGG | - | chr3_4:72964721-72964740 | None:intergenic | 40.0% | |
| TAGTGATTGACTGTCTCTGA+AGG | + | chr3_4:72964953-72964972 | Msa0520420:intron | 40.0% | |
| GCGTATATCATTGCTAGTTC+TGG | - | chr3_4:72965259-72965278 | None:intergenic | 40.0% | |
| AATCATTCCCAGTCAAATGG+AGG | - | chr3_4:72965336-72965355 | None:intergenic | 40.0% | |
| !!! | ACAATTTTTTCCTATGGGGG+TGG | + | chr3_4:72965418-72965437 | Msa0520420:intron | 40.0% |
| TGCAATAACTCCCAATGCAA+TGG | - | chr3_4:72965828-72965847 | None:intergenic | 40.0% | |
| GAAGAACTTTGCTTACGTAC+AGG | - | chr3_4:72966037-72966056 | None:intergenic | 40.0% | |
| ! | TGGAGTTAACCAATTGGCTT+AGG | - | chr3_4:72966122-72966141 | None:intergenic | 40.0% |
| TATGTGCAAAGAGGAAGTGA+TGG | - | chr3_4:72966298-72966317 | None:intergenic | 40.0% | |
| AAACGCTGTTATGTGCAAAG+AGG | - | chr3_4:72966307-72966326 | None:intergenic | 40.0% | |
| CAAAAGAGTCGGGTTTATAG+TGG | - | chr3_4:72966385-72966404 | None:intergenic | 40.0% | |
| ! | TTCTAGCACTGAAGATAAGG+AGG | - | chr3_4:72966581-72966600 | None:intergenic | 40.0% |
| AATGTTGTAACCGTGTACCT+TGG | + | chr3_4:72966711-72966730 | Msa0520420:intron | 40.0% | |
| ATGGAGACTTGGGAGAATTA+GGG | + | chr3_4:72966756-72966775 | Msa0520420:intron | 40.0% | |
| TGGCTAGATTATATGACCAC+CGG | - | chr3_4:72967030-72967049 | None:intergenic | 40.0% | |
| AACTGCTCATCATCACTAAG+AGG | + | chr3_4:72967086-72967105 | Msa0520420:intron | 40.0% | |
| CTGAAGAATCCATAGAGACT+TGG | - | chr3_4:72967140-72967159 | None:intergenic | 40.0% | |
| CTTCAGTCATCCAAGATACA+CGG | + | chr3_4:72967154-72967173 | Msa0520420:intron | 40.0% | |
| TTGGCCCTAATACCAATTGT+TGG | - | chr3_4:72967252-72967271 | None:intergenic | 40.0% | |
| ! | TGTTTTGCTTCTTCACTTGC+AGG | + | chr3_4:72967437-72967456 | Msa0520420:intron | 40.0% |
| ! | GTTTTGCTTCTTCACTTGCA+GGG | + | chr3_4:72967438-72967457 | Msa0520420:intron | 40.0% |
| ACAGGAGTTGCACAAATTAG+GGG | - | chr3_4:72967485-72967504 | None:intergenic | 40.0% | |
| CACAGGAGTTGCACAAATTA+GGG | - | chr3_4:72967486-72967505 | None:intergenic | 40.0% | |
| TGTGATTGTGCCTTTCAGAT+TGG | + | chr3_4:72967752-72967771 | Msa0520420:intron | 40.0% | |
| ! | TTTTTCCCTTGGAGATGTGA+AGG | - | chr3_4:72967822-72967841 | None:intergenic | 40.0% |
| CTGAGATAAGTGGATGCTTA+TGG | + | chr3_4:72967993-72968012 | Msa0520420:intron | 40.0% | |
| AGGTTGCCACATATAACTGT+CGG | - | chr3_4:72968029-72968048 | None:intergenic | 40.0% | |
| ACCATATCAATGTGGCAGTT+TGG | + | chr3_4:72968262-72968281 | Msa0520420:intron | 40.0% | |
| TCCAAACTGCCACATTGATA+TGG | - | chr3_4:72968266-72968285 | None:intergenic | 40.0% | |
| TTTGGCTACTACAGAACATG+AGG | + | chr3_4:72968291-72968310 | Msa0520420:CDS | 40.0% | |
| ACTCAATACTGGAACAGAGA+AGG | + | chr3_4:72968341-72968360 | Msa0520420:CDS | 40.0% | |
| GCGAGGTGATCTTTATCAAT+TGG | + | chr3_4:72968492-72968511 | Msa0520420:CDS | 40.0% | |
| TGAATTCCAACTGAATGGAG+CGG | + | chr3_4:72968530-72968549 | Msa0520420:exon | 40.0% | |
| ! | CATGCACATGCCATCTTTTA+TGG | + | chr3_4:72968601-72968620 | Msa0520420:three_prime_UTR | 40.0% |
| CTTTCTTTCAGTTCGAGGTT+TGG | - | chr3_4:72968660-72968679 | None:intergenic | 40.0% | |
| ACTTGACATAAGTACAGGAG+TGG | + | chr3_4:72968800-72968819 | Msa0520420:three_prime_UTR | 40.0% | |
| GTGAATTATGTCGTCTTCAC+AGG | + | chr3_4:72968851-72968870 | Msa0520420:three_prime_UTR | 40.0% | |
| AGTAGACTCATGCAGTTGAA+TGG | + | chr3_4:72969075-72969094 | Msa0520420:three_prime_UTR | 40.0% | |
| ! | GAGAAGGTGAAGAGTGGATT+TGG | - | chr3_4:72963526-72963545 | None:intergenic | 45.0% |
| TGATTGGAGAAGGTGAAGAG+TGG | - | chr3_4:72963532-72963551 | None:intergenic | 45.0% | |
| CTCTTCACCTTCTCCAATCA+TGG | + | chr3_4:72963532-72963551 | Msa0520420:exon | 45.0% | |
| GATGATGAAGCAGCCATGAT+TGG | - | chr3_4:72963548-72963567 | None:intergenic | 45.0% | |
| AAGAGAATGGGAACTTGCCT+TGG | - | chr3_4:72963633-72963652 | None:intergenic | 45.0% | |
| !! | TTTAGCACTGACACAGACAC+CGG | + | chr3_4:72963651-72963670 | Msa0520420:intron | 45.0% |
| ! | TAATTACATGTGTCGGCCAC+CGG | + | chr3_4:72963704-72963723 | Msa0520420:intron | 45.0% |
| TATTCAAGACGCTGCTGCAA+AGG | + | chr3_4:72963855-72963874 | Msa0520420:CDS | 45.0% | |
| ATTCAAGACGCTGCTGCAAA+GGG | + | chr3_4:72963856-72963875 | Msa0520420:CDS | 45.0% | |
| ! | TCAGAAAGCATAGCAGTGGA+AGG | - | chr3_4:72964064-72964083 | None:intergenic | 45.0% |
| AGGAATAGAACCACCAACGA+TGG | - | chr3_4:72964110-72964129 | None:intergenic | 45.0% | |
| GGTTCTATTCCTGAACGTTC+TGG | + | chr3_4:72964118-72964137 | Msa0520420:CDS | 45.0% | |
| AATCGATCTCCAGAACGTTC+AGG | - | chr3_4:72964130-72964149 | None:intergenic | 45.0% | |
| ACTCAAAGCCAAACACCGTA+AGG | + | chr3_4:72964186-72964205 | Msa0520420:CDS | 45.0% | |
| ACACCGTAAGGTAGTGTTTG+TGG | + | chr3_4:72964198-72964217 | Msa0520420:intron | 45.0% | |
| CACCGTAAGGTAGTGTTTGT+GGG | + | chr3_4:72964199-72964218 | Msa0520420:intron | 45.0% | |
| GTTTGTGGGAATCTTGTCTC+AGG | + | chr3_4:72964213-72964232 | Msa0520420:intron | 45.0% | |
| GGTATAGGAGTGACATCCTA+TGG | - | chr3_4:72964356-72964375 | None:intergenic | 45.0% | |
| CACCACACCTGAAGAGAATT+TGG | + | chr3_4:72964452-72964471 | Msa0520420:intron | 45.0% | |
| CAATGAAGGTAATCTTCCCG+GGG | - | chr3_4:72964579-72964598 | None:intergenic | 45.0% | |
| ! | GGCAAGAGTGTAAGAAGCTA+GGG | - | chr3_4:72964885-72964904 | None:intergenic | 45.0% |
| ! | AGGCAAGAGTGTAAGAAGCT+AGG | - | chr3_4:72964886-72964905 | None:intergenic | 45.0% |
| AGCTTCTTACACTCTTGCCT+AGG | + | chr3_4:72964886-72964905 | Msa0520420:intron | 45.0% | |
| GCACATAAGGTAAGATCACC+CGG | - | chr3_4:72964930-72964949 | None:intergenic | 45.0% | |
| GGGATGATTCATACAGAGGT+TGG | + | chr3_4:72965196-72965215 | Msa0520420:intron | 45.0% | |
| GCAATGATATACGCAGCAAG+AGG | + | chr3_4:72965265-72965284 | Msa0520420:CDS | 45.0% | |
| TTGTTCCACCTCCATTTGAC+TGG | + | chr3_4:72965325-72965344 | Msa0520420:intron | 45.0% | |
| TGTTCCACCTCCATTTGACT+GGG | + | chr3_4:72965326-72965345 | Msa0520420:intron | 45.0% | |
| TTTATGGTATCCACCCCCAT+AGG | - | chr3_4:72965431-72965450 | None:intergenic | 45.0% | |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr3_4:72965514-72965533 | Msa0520420:intron | 45.0% |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | chr3_4:72965515-72965534 | Msa0520420:intron | 45.0% |
| GTTGTCATGTTAAAAGCCCC+AGG | - | chr3_4:72965801-72965820 | None:intergenic | 45.0% | |
| ! | GGGGCTTTTAACATGACAAC+TGG | + | chr3_4:72965801-72965820 | Msa0520420:CDS | 45.0% |
| TGACAACTGGTCCATTGCAT+TGG | + | chr3_4:72965814-72965833 | Msa0520420:CDS | 45.0% | |
| GACAACTGGTCCATTGCATT+GGG | + | chr3_4:72965815-72965834 | Msa0520420:CDS | 45.0% | |
| TGCATTGGGAGTTATTGCAG+AGG | + | chr3_4:72965829-72965848 | Msa0520420:CDS | 45.0% | |
| GCATTGGGAGTTATTGCAGA+GGG | + | chr3_4:72965830-72965849 | Msa0520420:CDS | 45.0% | |
| CATATTGGGCCTAAGCCAAT+TGG | + | chr3_4:72966110-72966129 | Msa0520420:intron | 45.0% | |
| ! | GAGGGAGGCTAACAGAATTT+TGG | - | chr3_4:72966142-72966161 | None:intergenic | 45.0% |
| GTGAATTAGGAGGTGATGAC+TGG | - | chr3_4:72966168-72966187 | None:intergenic | 45.0% | |
| !!! | TATCCCCTCCCTTTTTTGTG+TGG | + | chr3_4:72966326-72966345 | Msa0520420:intron | 45.0% |
| ! | CTGATGGGCCACACAAAAAA+GGG | - | chr3_4:72966337-72966356 | None:intergenic | 45.0% |
| ! | ACTGATGGGCCACACAAAAA+AGG | - | chr3_4:72966338-72966357 | None:intergenic | 45.0% |
| CAAGCATCTGGCATACTGAT+GGG | - | chr3_4:72966352-72966371 | None:intergenic | 45.0% | |
| !! | GGTTATTTCTGGCAAGCATC+TGG | - | chr3_4:72966364-72966383 | None:intergenic | 45.0% |
| TGAAGATAAGGAGGAGTCAG+GGG | - | chr3_4:72966572-72966591 | None:intergenic | 45.0% | |
| CTGAAGATAAGGAGGAGTCA+GGG | - | chr3_4:72966573-72966592 | None:intergenic | 45.0% | |
| ACTGAAGATAAGGAGGAGTC+AGG | - | chr3_4:72966574-72966593 | None:intergenic | 45.0% | |
| ATGGATTCTGCAGTCATCCA+AGG | - | chr3_4:72966731-72966750 | None:intergenic | 45.0% | |
| ACTGCAGAATCCATACTCCA+TGG | + | chr3_4:72966737-72966756 | Msa0520420:intron | 45.0% | |
| ATCCATACTCCATGGAGACT+TGG | + | chr3_4:72966745-72966764 | Msa0520420:intron | 45.0% | |
| TCCATACTCCATGGAGACTT+GGG | + | chr3_4:72966746-72966765 | Msa0520420:intron | 45.0% | |
| CTAATTCTCCCAAGTCTCCA+TGG | - | chr3_4:72966757-72966776 | None:intergenic | 45.0% | |
| CATGGAGACTTGGGAGAATT+AGG | + | chr3_4:72966755-72966774 | Msa0520420:intron | 45.0% | |
| TATATGCCCATTAGTGAGGC+AGG | + | chr3_4:72966859-72966878 | Msa0520420:intron | 45.0% | |
| ATATGCCCATTAGTGAGGCA+GGG | + | chr3_4:72966860-72966879 | Msa0520420:intron | 45.0% | |
| TATTGTGAACGGGTCGTGAT+TGG | - | chr3_4:72966921-72966940 | None:intergenic | 45.0% | |
| CTAGATTATATGACCACCGG+TGG | - | chr3_4:72967027-72967046 | None:intergenic | 45.0% | |
| AATGCGATGACCGTGTATCT+TGG | - | chr3_4:72967167-72967186 | None:intergenic | 45.0% | |
| GGCCAACTAGATCTGTTGTA+TGG | + | chr3_4:72967266-72967285 | Msa0520420:intron | 45.0% | |
| TTGCAGGGCTACAGATAATC+AGG | + | chr3_4:72967453-72967472 | Msa0520420:intron | 45.0% | |
| CCACAGGAGTTGCACAAATT+AGG | - | chr3_4:72967487-72967506 | None:intergenic | 45.0% | |
| ! | CCTAATTTGTGCAACTCCTG+TGG | + | chr3_4:72967484-72967503 | Msa0520420:intron | 45.0% |
| ATGAGCCGTATATGTTGCAG+AGG | + | chr3_4:72967786-72967805 | Msa0520420:intron | 45.0% | |
| ATCACTCCTTCACATCTCCA+AGG | + | chr3_4:72967813-72967832 | Msa0520420:intron | 45.0% | |
| TCACTCCTTCACATCTCCAA+GGG | + | chr3_4:72967814-72967833 | Msa0520420:intron | 45.0% | |
| ! | TTGAATTGCTGGGATTGGTG+CGG | + | chr3_4:72967886-72967905 | Msa0520420:intron | 45.0% |
| GGATACTACTGGTGGTTATG+TGG | + | chr3_4:72968062-72968081 | Msa0520420:CDS | 45.0% | |
| TACTGGTGGTTATGTGGCTT+GGG | + | chr3_4:72968068-72968087 | Msa0520420:CDS | 45.0% | |
| ACTTACAGGACCAACAAGAG+TGG | - | chr3_4:72968100-72968119 | None:intergenic | 45.0% | |
| ! | GTGGCAGTTTGGAGAAGTTT+TGG | + | chr3_4:72968273-72968292 | Msa0520420:intron | 45.0% |
| GAGGCTGAATTCCAACTGAA+TGG | + | chr3_4:72968525-72968544 | Msa0520420:exon | 45.0% | |
| GAATTCCAACTGAATGGAGC+GGG | + | chr3_4:72968531-72968550 | Msa0520420:exon | 45.0% | |
| GAGCGGGACTTCTATATTTG+AGG | + | chr3_4:72968547-72968566 | Msa0520420:three_prime_UTR | 45.0% | |
| GCATGTGCATGCTTCTTACA+AGG | - | chr3_4:72968592-72968611 | None:intergenic | 45.0% | |
| TATGTCGTCTTCACAGGATC+AGG | + | chr3_4:72968857-72968876 | Msa0520420:three_prime_UTR | 45.0% | |
| AGGATCAGGCTATGAGGAAT+TGG | + | chr3_4:72968871-72968890 | Msa0520420:three_prime_UTR | 45.0% | |
| !! | CACAGGCCGAAATGGATTAA+AGG | + | chr3_4:72968919-72968938 | Msa0520420:three_prime_UTR | 45.0% |
| AGACTCATGCAGTTGAATGG+AGG | + | chr3_4:72969078-72969097 | Msa0520420:three_prime_UTR | 45.0% | |
| GAAGCAGCCATGATTGGAGA+AGG | - | chr3_4:72963542-72963561 | None:intergenic | 50.0% | |
| GTCAGTATCAGTGTGGTGTC+CGG | - | chr3_4:72963673-72963692 | None:intergenic | 50.0% | |
| ! | AGCATTAAAGGTGTGTCCGG+TGG | - | chr3_4:72963723-72963742 | None:intergenic | 50.0% |
| ACTCTCAGTCACCTCCGATA+AGG | + | chr3_4:72963804-72963823 | Msa0520420:CDS | 50.0% | |
| GCTGAGGATATTGATGCTGG+TGG | + | chr3_4:72964028-72964047 | Msa0520420:CDS | 50.0% | |
| ! | TGTTGTGTCTTTGGCACCGA+CGG | + | chr3_4:72964160-72964179 | Msa0520420:CDS | 50.0% |
| CATACAGAGGTTGGACGCAT+TGG | + | chr3_4:72965205-72965224 | Msa0520420:intron | 50.0% | |
| CATTCCCAGTCAAATGGAGG+TGG | - | chr3_4:72965333-72965352 | None:intergenic | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr3_4:72965516-72965535 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr3_4:72965513-72965532 | Msa0520420:intron | 50.0% |
| CAACCCCACTTAGTGGGATA+AGG | - | chr3_4:72965521-72965540 | None:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+TGG | + | chr3_4:72965519-72965538 | Msa0520420:intron | 50.0% | |
| CAAAGCCAACCCCACTTAGT+GGG | - | chr3_4:72965527-72965546 | None:intergenic | 50.0% | |
| !! | CACTAAGTGGGGTTGGCTTT+GGG | + | chr3_4:72965526-72965545 | Msa0520420:intron | 50.0% |
| !! | ACTAAGTGGGGTTGGCTTTG+GGG | + | chr3_4:72965527-72965546 | Msa0520420:intron | 50.0% |
| CTCACTTGCTCTGCTATCCT+GGG | + | chr3_4:72965781-72965800 | Msa0520420:CDS | 50.0% | |
| TCACTTGCTCTGCTATCCTG+GGG | + | chr3_4:72965782-72965801 | Msa0520420:CDS | 50.0% | |
| GGAGGTGATGACTGGAATGA+GGG | - | chr3_4:72966160-72966179 | None:intergenic | 50.0% | |
| AGGAGGTGATGACTGGAATG+AGG | - | chr3_4:72966161-72966180 | None:intergenic | 50.0% | |
| GTGCAAAGAGGAAGTGATGG+AGG | - | chr3_4:72966295-72966314 | None:intergenic | 50.0% | |
| TGGGCCACACAAAAAAGGGA+GGG | - | chr3_4:72966333-72966352 | None:intergenic | 50.0% | |
| ATGGGCCACACAAAAAAGGG+AGG | - | chr3_4:72966334-72966353 | None:intergenic | 50.0% | |
| GCAAGCATCTGGCATACTGA+TGG | - | chr3_4:72966353-72966372 | None:intergenic | 50.0% | |
| AGGAGTCAGGGGAAGGTAAT+GGG | - | chr3_4:72966561-72966580 | None:intergenic | 50.0% | |
| CTGCAGTCATCCAAGGTACA+CGG | - | chr3_4:72966724-72966743 | None:intergenic | 50.0% | |
| TCCCAAGTCTCCATGGAGTA+TGG | - | chr3_4:72966750-72966769 | None:intergenic | 50.0% | |
| ! | TGAACGGGTCGTGATTGGTT+AGG | - | chr3_4:72966916-72966935 | None:intergenic | 50.0% |
| GATTATATGACCACCGGTGG+AGG | - | chr3_4:72967024-72967043 | None:intergenic | 50.0% | |
| CTACTGGTGGTTATGTGGCT+TGG | + | chr3_4:72968067-72968086 | Msa0520420:CDS | 50.0% | |
| ACTGGTGGTTATGTGGCTTG+GGG | + | chr3_4:72968069-72968088 | Msa0520420:CDS | 50.0% | |
| ACCTCCCTGTGACTAAGCAA+CGG | + | chr3_4:72968470-72968489 | Msa0520420:CDS | 50.0% | |
| CTTCACAGGATCAGGCTATG+AGG | + | chr3_4:72968865-72968884 | Msa0520420:three_prime_UTR | 50.0% | |
| GTCAGATTCACAGGCCGAAA+TGG | + | chr3_4:72968911-72968930 | Msa0520420:three_prime_UTR | 50.0% | |
| CTGGTGCAAGTATGCTCTGA+GGG | - | chr3_4:72968972-72968991 | None:intergenic | 50.0% | |
| ACTGGTGCAAGTATGCTCTG+AGG | - | chr3_4:72968973-72968992 | None:intergenic | 50.0% | |
| TGGAGTGGGCAAGGGAATTG+CGG | - | chr3_4:72963603-72963622 | None:intergenic | 55.0% | |
| GAACTTGCCTTGGTGAGAGG+TGG | - | chr3_4:72963623-72963642 | None:intergenic | 55.0% | |
| TGGGAACTTGCCTTGGTGAG+AGG | - | chr3_4:72963626-72963645 | None:intergenic | 55.0% | |
| ! | GAGGTTGGACGCATTGGCAT+AGG | + | chr3_4:72965211-72965230 | Msa0520420:intron | 55.0% |
| CCAAAGCCAACCCCACTTAG+TGG | - | chr3_4:72965528-72965547 | None:intergenic | 55.0% | |
| !! | CCACTAAGTGGGGTTGGCTT+TGG | + | chr3_4:72965525-72965544 | Msa0520420:intron | 55.0% |
| GCTCACTTGCTCTGCTATCC+TGG | + | chr3_4:72965780-72965799 | Msa0520420:CDS | 55.0% | |
| GGGAGTTATTGCAGAGGGCA+AGG | + | chr3_4:72965835-72965854 | Msa0520420:CDS | 55.0% | |
| GGTGATGACTGGAATGAGGG+AGG | - | chr3_4:72966157-72966176 | None:intergenic | 55.0% | |
| GGGCCACACAAAAAAGGGAG+GGG | - | chr3_4:72966332-72966351 | None:intergenic | 55.0% | |
| GAGGAGTCAGGGGAAGGTAA+TGG | - | chr3_4:72966562-72966581 | None:intergenic | 55.0% | |
| GATAAGGAGGAGTCAGGGGA+AGG | - | chr3_4:72966568-72966587 | None:intergenic | 55.0% | |
| GAGGTCCCTGCCTCACTAAT+GGG | - | chr3_4:72966868-72966887 | None:intergenic | 55.0% | |
| AGAGGTCCCTGCCTCACTAA+TGG | - | chr3_4:72966869-72966888 | None:intergenic | 55.0% | |
| TGAGGCAGGGACCTCTCAAT+GGG | + | chr3_4:72966873-72966892 | Msa0520420:intron | 55.0% | |
| TGGCAACCTGTTCACCTGCT+CGG | + | chr3_4:72968040-72968059 | Msa0520420:CDS | 55.0% | |
| AGTATCCCGAGCAGGTGAAC+AGG | - | chr3_4:72968049-72968068 | None:intergenic | 55.0% | |
| TCACCTGCTCGGGATACTAC+TGG | + | chr3_4:72968051-72968070 | Msa0520420:CDS | 55.0% | |
| TGGGGTCACTCCACTCTTGT+TGG | + | chr3_4:72968087-72968106 | Msa0520420:CDS | 55.0% | |
| CTCGCCGTTGCTTAGTCACA+GGG | - | chr3_4:72968477-72968496 | None:intergenic | 55.0% | |
| GAAGTCCCGCTCCATTCAGT+TGG | - | chr3_4:72968539-72968558 | None:intergenic | 55.0% | |
| GGAGTGGGCAAGGGAATTGC+GGG | - | chr3_4:72963602-72963621 | None:intergenic | 60.0% | |
| GTGAGAGGTGGAGTGGGCAA+GGG | - | chr3_4:72963611-72963630 | None:intergenic | 60.0% | |
| GCCTTGGTGAGAGGTGGAGT+GGG | - | chr3_4:72963617-72963636 | None:intergenic | 60.0% | |
| TGCCTTGGTGAGAGGTGGAG+TGG | - | chr3_4:72963618-72963637 | None:intergenic | 60.0% | |
| GTGAGGCAGGGACCTCTCAA+TGG | + | chr3_4:72966872-72966891 | Msa0520420:intron | 60.0% | |
| GGAGGCAGGGACCTCTCAAT+GGG | - | chr3_4:72967006-72967025 | None:intergenic | 60.0% | |
| TGGAGGCAGGGACCTCTCAA+TGG | - | chr3_4:72967007-72967026 | None:intergenic | 60.0% | |
| TATGACCACCGGTGGAGGCA+GGG | - | chr3_4:72967019-72967038 | None:intergenic | 60.0% | |
| ATATGACCACCGGTGGAGGC+AGG | - | chr3_4:72967020-72967039 | None:intergenic | 60.0% | |
| GGCAACCTGTTCACCTGCTC+GGG | + | chr3_4:72968041-72968060 | Msa0520420:CDS | 60.0% | |
| CCACCAGTAGTATCCCGAGC+AGG | - | chr3_4:72968057-72968076 | None:intergenic | 60.0% | |
| CCTGCTCGGGATACTACTGG+TGG | + | chr3_4:72968054-72968073 | Msa0520420:CDS | 60.0% | |
| GCCGTTGCTTAGTCACAGGG+AGG | - | chr3_4:72968474-72968493 | None:intergenic | 60.0% | |
| CCTCGCCGTTGCTTAGTCAC+AGG | - | chr3_4:72968478-72968497 | None:intergenic | 60.0% | |
| CCTGTGACTAAGCAACGGCG+AGG | + | chr3_4:72968475-72968494 | Msa0520420:CDS | 60.0% | |
| GTGGGCAAGGGAATTGCGGG+TGG | - | chr3_4:72963599-72963618 | None:intergenic | 65.0% | |
| GGTGAGAGGTGGAGTGGGCA+AGG | - | chr3_4:72963612-72963631 | None:intergenic | 65.0% | |
| GCCCACTCCACCTCTCACCA+AGG | + | chr3_4:72963613-72963632 | Msa0520420:CDS | 65.0% | |
| TGAGAGGTCCCTGCCTCCAC+CGG | + | chr3_4:72967008-72967027 | Msa0520420:intron | 65.0% | |
| GAGGTCCCTGCCTCCACCGG+TGG | + | chr3_4:72967011-72967030 | Msa0520420:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 72963433 | 72969117 | 72963433 | ID=Msa0520420;Name=Msa0520420 |
| chr3_4 | mRNA | 72963433 | 72969117 | 72963433 | ID=Msa0520420-mRNA-1;Parent=Msa0520420;Name=Msa0520420-mRNA-1;_AED=0.07;_eAED=0.07;_QI=118|1|1|1|1|1|10|574|310 |
| chr3_4 | exon | 72963433 | 72963634 | 72963433 | ID=Msa0520420-mRNA-1:exon:20227;Parent=Msa0520420-mRNA-1 |
| chr3_4 | exon | 72963784 | 72963900 | 72963784 | ID=Msa0520420-mRNA-1:exon:20228;Parent=Msa0520420-mRNA-1 |
| chr3_4 | exon | 72963983 | 72964207 | 72963983 | ID=Msa0520420-mRNA-1:exon:20229;Parent=Msa0520420-mRNA-1 |
| chr3_4 | exon | 72964553 | 72964646 | 72964553 | ID=Msa0520420-mRNA-1:exon:20230;Parent=Msa0520420-mRNA-1 |
| chr3_4 | exon | 72965212 | 72965286 | 72965212 | ID=Msa0520420-mRNA-1:exon:20231;Parent=Msa0520420-mRNA-1 |
| chr3_4 | exon | 72965778 | 72965856 | 72965778 | ID=Msa0520420-mRNA-1:exon:20232;Parent=Msa0520420-mRNA-1 |
| chr3_4 | exon | 72967459 | 72967474 | 72967459 | ID=Msa0520420-mRNA-1:exon:20233;Parent=Msa0520420-mRNA-1 |
| chr3_4 | exon | 72968033 | 72968113 | 72968033 | ID=Msa0520420-mRNA-1:exon:20234;Parent=Msa0520420-mRNA-1 |
| chr3_4 | exon | 72968280 | 72968362 | 72968280 | ID=Msa0520420-mRNA-1:exon:20235;Parent=Msa0520420-mRNA-1 |
| chr3_4 | exon | 72968465 | 72969117 | 72968465 | ID=Msa0520420-mRNA-1:exon:20236;Parent=Msa0520420-mRNA-1 |
| chr3_4 | five_prime_UTR | 72963433 | 72963550 | 72963433 | ID=Msa0520420-mRNA-1:five_prime_utr;Parent=Msa0520420-mRNA-1 |
| chr3_4 | CDS | 72963551 | 72963634 | 72963551 | ID=Msa0520420-mRNA-1:cds;Parent=Msa0520420-mRNA-1 |
| chr3_4 | CDS | 72963784 | 72963900 | 72963784 | ID=Msa0520420-mRNA-1:cds;Parent=Msa0520420-mRNA-1 |
| chr3_4 | CDS | 72963983 | 72964207 | 72963983 | ID=Msa0520420-mRNA-1:cds;Parent=Msa0520420-mRNA-1 |
| chr3_4 | CDS | 72964553 | 72964646 | 72964553 | ID=Msa0520420-mRNA-1:cds;Parent=Msa0520420-mRNA-1 |
| chr3_4 | CDS | 72965212 | 72965286 | 72965212 | ID=Msa0520420-mRNA-1:cds;Parent=Msa0520420-mRNA-1 |
| chr3_4 | CDS | 72965778 | 72965856 | 72965778 | ID=Msa0520420-mRNA-1:cds;Parent=Msa0520420-mRNA-1 |
| chr3_4 | CDS | 72967459 | 72967474 | 72967459 | ID=Msa0520420-mRNA-1:cds;Parent=Msa0520420-mRNA-1 |
| chr3_4 | CDS | 72968033 | 72968113 | 72968033 | ID=Msa0520420-mRNA-1:cds;Parent=Msa0520420-mRNA-1 |
| chr3_4 | CDS | 72968280 | 72968362 | 72968280 | ID=Msa0520420-mRNA-1:cds;Parent=Msa0520420-mRNA-1 |
| chr3_4 | CDS | 72968465 | 72968543 | 72968465 | ID=Msa0520420-mRNA-1:cds;Parent=Msa0520420-mRNA-1 |
| chr3_4 | three_prime_UTR | 72968544 | 72969117 | 72968544 | ID=Msa0520420-mRNA-1:three_prime_utr;Parent=Msa0520420-mRNA-1 |
| Gene Sequence |
| Protein sequence |
