AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0521030

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0521030 MtrunA17_Chr3g0137101 98.450 645 10 0 1 645 1 645 0.0 1317
Msa0521030 MtrunA17_Chr1g0149841 48.217 589 194 17 6 577 3 497 1.51e-150 444
Msa0521030 MtrunA17_Chr2g0304841 39.628 699 331 17 6 642 16 685 8.39e-135 410
Msa0521030 MtrunA17_Chr1g0149851 52.691 446 150 14 6 413 3 425 1.71e-125 382
Msa0521030 MtrunA17_Chr1g0149851 32.836 201 82 11 434 620 365 526 3.17e-11 66.2
Msa0521030 MtrunA17_Chr7g0275891 56.863 357 103 7 5 338 2 330 5.74e-115 348
Msa0521030 MtrunA17_Chr2g0294911 48.747 359 149 7 6 357 27 357 4.57e-100 318
Msa0521030 MtrunA17_Chr4g0067981 57.934 271 82 3 6 263 29 280 2.73e-98 315
Msa0521030 MtrunA17_Chr1g0161431 55.290 293 119 3 4 286 7 297 8.12e-98 312
Msa0521030 MtrunA17_Chr7g0275401 54.167 312 111 5 6 315 3 284 1.06e-96 298
Msa0521030 MtrunA17_Chr4g0074411 41.483 499 260 11 2 489 12 489 1.12e-96 309
Msa0521030 MtrunA17_Chr4g0074401 51.064 329 145 4 8 328 17 337 1.79e-92 298
Msa0521030 MtrunA17_Chr3g0123131 53.289 304 115 5 8 310 13 290 3.24e-91 293
Msa0521030 MtrunA17_Chr8g0376881 56.343 268 95 4 6 265 23 276 5.87e-89 286
Msa0521030 MtrunA17_Chr3g0134461 59.677 248 43 3 1 247 1 192 2.24e-78 247
Msa0521030 MtrunA17_Chr1g0149831 65.672 201 60 3 67 266 1 193 3.68e-76 243
Msa0521030 MtrunA17_Chr3g0134481 83.459 133 22 0 1 133 1 133 3.85e-69 223
Msa0521030 MtrunA17_Chr3g0134481 73.585 53 14 0 197 249 131 183 1.36e-20 90.1
Msa0521030 MtrunA17_Chr4g0074421 56.923 195 75 3 58 252 2 187 7.41e-62 204
Msa0521030 MtrunA17_Chr4g0009851 41.700 247 112 4 8 254 11 225 3.77e-52 182
Msa0521030 MtrunA17_Chr4g0009901 39.516 248 118 3 8 255 10 225 1.29e-47 168
Msa0521030 MtrunA17_Chr4g0009981 40.099 202 90 3 53 254 2 172 8.16e-39 144
Msa0521030 MtrunA17_Chr6g0471041 36.078 255 129 5 1 254 7 228 4.03e-38 146
Msa0521030 MtrunA17_Chr8g0391911 34.231 260 151 5 5 257 6 252 1.53e-33 129
Msa0521030 MtrunA17_Chr8g0350761 29.297 256 161 6 11 250 20 271 1.45e-25 110
Msa0521030 MtrunA17_Chr6g0473731 34.706 170 84 3 88 256 10 153 6.78e-24 105
Msa0521030 MtrunA17_Chr3g0127941 31.677 161 98 3 12 161 56 215 4.72e-23 104
Msa0521030 MtrunA17_Chr4g0031961 46.667 105 53 1 164 265 94 198 3.60e-22 97.8
Msa0521030 MtrunA17_Chr6g0469321 66.667 75 24 1 214 287 70 144 5.99e-22 93.6
Msa0521030 MtrunA17_Chr4g0011071 32.934 167 81 3 58 224 39 174 7.85e-22 93.2
Msa0521030 MtrunA17_Chr7g0276361 32.039 206 115 5 1 198 1 189 1.56e-21 99.0
Msa0521030 MtrunA17_Chr6g0456631 33.548 155 96 4 5 157 6 155 1.63e-21 92.0
Msa0521030 MtrunA17_Chr1g0181811 37.705 122 73 2 12 130 85 206 1.74e-21 99.4
Msa0521030 MtrunA17_Chr8g0383961 36.923 130 82 0 1 130 7 136 1.82e-21 94.7
Msa0521030 MtrunA17_Chr4g0030271 39.344 122 71 1 12 130 89 210 2.13e-21 99.4
Msa0521030 MtrunA17_Chr7g0255711 56.000 75 32 1 186 259 78 152 5.09e-21 94.0
Msa0521030 MtrunA17_Chr8g0345901 34.868 152 88 2 14 162 38 181 7.89e-21 97.1
Msa0521030 MtrunA17_Chr3g0091641 34.677 124 78 1 12 132 24 147 1.74e-19 92.4
Msa0521030 MtrunA17_Chr4g0009991 36.486 148 62 2 100 247 1 116 2.05e-19 84.7
Msa0521030 MtrunA17_Chr4g0061021 33.582 134 84 2 4 132 23 156 6.30e-18 87.8
Msa0521030 MtrunA17_Chr2g0324891 45.455 88 48 0 178 265 141 228 7.98e-18 86.3
Msa0521030 MtrunA17_Chr4g0040481 50.685 73 36 0 193 265 153 225 8.50e-18 86.3
Msa0521030 MtrunA17_Chr5g0400241 56.061 66 29 0 191 256 304 369 9.88e-18 87.0
Msa0521030 MtrunA17_Chr5g0400241 37.097 124 74 2 8 130 14 134 1.78e-13 73.6
Msa0521030 MtrunA17_Chr4g0054981 60.656 61 24 0 196 256 308 368 3.13e-17 85.5
Msa0521030 MtrunA17_Chr4g0054981 33.065 124 79 2 8 130 14 134 5.36e-12 68.9
Msa0521030 MtrunA17_Chr4g0010001 39.506 81 48 1 8 88 10 89 5.64e-14 67.8
Msa0521030 MtrunA17_Chr5g0402631 39.200 125 64 5 197 318 213 328 1.04e-13 73.2
Msa0521030 MtrunA17_Chr1g0198601 45.679 81 42 2 191 269 204 284 1.46e-13 72.8
Msa0521030 MtrunA17_Chr5g0423031 38.000 100 56 3 8 106 10 104 1.64e-13 69.3
Msa0521030 MtrunA17_Chr7g0274471 62.500 56 20 1 196 250 216 271 3.46e-13 72.0
Msa0521030 MtrunA17_Chr1g0190301 56.897 58 24 1 194 250 171 228 8.91e-13 70.5
Msa0521030 MtrunA17_Chr5g0422621 40.230 87 50 2 185 270 186 271 1.35e-12 69.7
Msa0521030 MtrunA17_Chr4g0045361 38.318 107 50 3 197 298 273 368 1.39e-12 70.1
Msa0521030 MtrunA17_Chr7g0261911 53.968 63 28 1 194 255 258 320 2.38e-12 69.7
Msa0521030 MtrunA17_Chr3g0134471 50.000 66 9 1 246 311 4 45 7.29e-12 60.8
Msa0521030 MtrunA17_Chr5g0417521 50.847 59 28 1 194 251 11 69 1.42e-11 66.6
Msa0521030 MtrunA17_Chr8g0352871 28.571 161 88 3 14 147 11 171 3.26e-11 62.8
Msa0521030 MtrunA17_Chr4g0062921 48.387 62 31 1 197 257 234 295 3.79e-11 65.9
Msa0521030 MtrunA17_Chr6g0461641 49.153 59 29 1 194 251 38 96 6.98e-11 64.7
Msa0521030 MtrunA17_Chr2g0321461 49.153 59 29 1 194 251 41 99 7.10e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0521030 AT2G25180.1 52.752 436 155 13 6 419 11 417 5.20e-128 390
Msa0521030 AT4G31920.1 53.117 369 109 9 6 355 11 334 2.88e-109 340
Msa0521030 AT3G16857.1 55.674 282 93 5 8 266 33 305 9.87e-95 306
Msa0521030 AT3G16857.2 55.674 282 93 5 8 266 33 305 2.56e-94 305
Msa0521030 AT5G58080.1 49.319 367 145 9 2 349 8 352 4.01e-92 298
Msa0521030 AT2G01760.1 56.538 260 110 3 6 262 5 264 3.69e-86 275
Msa0521030 AT1G67710.1 57.769 251 97 4 9 256 8 252 7.17e-82 268
Msa0521030 AT2G01760.2 51.042 288 110 4 6 262 5 292 6.28e-80 259
Msa0521030 AT3G16857.3 54.733 243 78 5 47 266 2 235 2.77e-75 253
Msa0521030 AT2G01760.3 54.774 199 87 3 67 262 1 199 2.21e-56 194
Msa0521030 AT1G67710.2 57.513 193 73 4 67 256 1 187 3.21e-55 195
Msa0521030 AT5G49240.1 39.167 240 141 2 8 247 38 272 1.64e-51 180
Msa0521030 AT3G62670.1 37.091 275 144 6 2 267 31 285 4.72e-42 158
Msa0521030 AT1G67710.3 52.601 173 73 4 87 256 12 178 5.23e-41 155
Msa0521030 AT1G49190.1 35.547 256 150 5 7 255 29 276 7.05e-40 151
Msa0521030 AT5G07210.2 29.683 347 197 10 10 328 14 341 1.67e-34 139
Msa0521030 AT5G07210.1 29.014 355 197 11 10 328 14 349 4.48e-32 132
Msa0521030 AT2G27070.1 30.576 278 154 8 10 256 14 283 3.97e-28 119
Msa0521030 AT2G46790.3 36.082 194 99 6 12 185 37 225 1.91e-25 110
Msa0521030 AT2G46790.1 36.082 194 99 6 12 185 37 225 2.55e-25 110
Msa0521030 AT1G49190.2 39.200 125 76 0 7 131 29 153 3.99e-25 110
Msa0521030 AT5G24470.1 35.294 170 94 5 6 168 42 202 1.33e-23 105
Msa0521030 AT5G59570.2 55.172 87 36 2 180 263 120 206 4.22e-23 100
Msa0521030 AT5G59570.1 55.172 87 36 2 180 263 120 206 4.22e-23 100
Msa0521030 AT3G46640.2 52.381 84 40 0 182 265 128 211 9.99e-23 100
Msa0521030 AT3G46640.1 52.381 84 40 0 182 265 128 211 9.99e-23 100
Msa0521030 AT3G46640.3 53.086 81 38 0 182 262 128 208 1.44e-22 99.8
Msa0521030 AT1G68210.1 26.937 271 171 4 12 257 13 281 5.10e-22 101
Msa0521030 AT5G60100.7 37.795 127 75 2 8 130 59 185 1.29e-21 98.2
Msa0521030 AT5G60100.6 37.795 127 75 2 8 130 59 185 1.29e-21 98.2
Msa0521030 AT5G60100.4 37.795 127 75 2 8 130 59 185 1.29e-21 98.2
Msa0521030 AT5G60100.5 37.795 127 75 2 8 130 59 185 1.79e-21 98.6
Msa0521030 AT5G60100.3 37.795 127 75 2 8 130 59 185 1.79e-21 98.6
Msa0521030 AT5G60100.1 37.795 127 75 2 8 130 59 185 1.79e-21 98.6
Msa0521030 AT5G60100.2 37.795 127 75 2 8 130 59 185 4.19e-21 97.8
Msa0521030 AT2G40970.1 65.000 60 21 0 197 256 104 163 8.87e-21 92.8
Msa0521030 AT5G05090.1 65.000 60 21 0 197 256 80 139 1.18e-20 92.8
Msa0521030 AT3G10760.1 65.000 60 21 0 197 256 104 163 1.21e-20 94.0
Msa0521030 AT5G02810.1 38.525 122 72 1 12 130 78 199 1.49e-20 96.7
Msa0521030 AT5G44190.2 59.155 71 29 0 196 266 145 215 3.65e-20 93.2
Msa0521030 AT5G44190.1 59.155 71 29 0 196 266 145 215 4.68e-20 93.2
Msa0521030 AT5G61380.1 34.677 124 78 1 12 132 19 142 6.44e-19 91.3
Msa0521030 AT2G20570.1 43.878 98 51 1 159 256 118 211 2.20e-17 85.5
Msa0521030 AT4G18020.8 41.748 103 53 1 161 256 252 354 3.10e-16 82.4
Msa0521030 AT4G18020.8 34.559 136 80 3 6 134 12 145 3.16e-13 72.8
Msa0521030 AT4G18020.11 41.748 103 53 1 161 256 252 354 3.10e-16 82.4
Msa0521030 AT4G18020.11 34.559 136 80 3 6 134 12 145 3.16e-13 72.8
Msa0521030 AT4G18020.4 41.748 103 53 1 161 256 252 354 3.10e-16 82.4
Msa0521030 AT4G18020.4 34.559 136 80 3 6 134 12 145 3.16e-13 72.8
Msa0521030 AT4G18020.5 41.748 103 53 1 161 256 252 354 3.10e-16 82.4
Msa0521030 AT4G18020.5 34.559 136 80 3 6 134 12 145 3.16e-13 72.8
Msa0521030 AT4G18020.10 41.748 103 53 1 161 256 252 354 3.10e-16 82.4
Msa0521030 AT4G18020.10 34.559 136 80 3 6 134 12 145 3.16e-13 72.8
Msa0521030 AT4G18020.7 41.748 103 53 1 161 256 252 354 3.10e-16 82.4
Msa0521030 AT4G18020.7 34.559 136 80 3 6 134 12 145 3.16e-13 72.8
Msa0521030 AT4G18020.3 41.748 103 53 1 161 256 252 354 3.51e-16 82.4
Msa0521030 AT4G18020.3 34.559 136 80 3 6 134 12 145 5.03e-13 72.4
Msa0521030 AT4G18020.2 41.748 103 53 1 161 256 252 354 3.51e-16 82.4
Msa0521030 AT4G18020.2 34.559 136 80 3 6 134 12 145 5.03e-13 72.4
Msa0521030 AT4G18020.1 41.748 103 53 1 161 256 252 354 3.51e-16 82.4
Msa0521030 AT4G18020.1 34.559 136 80 3 6 134 12 145 5.03e-13 72.4
Msa0521030 AT4G18020.6 41.748 103 53 1 161 256 252 354 3.51e-16 82.4
Msa0521030 AT4G18020.6 34.559 136 80 3 6 134 12 145 5.03e-13 72.4
Msa0521030 AT4G18020.9 41.748 103 53 1 161 256 252 354 3.51e-16 82.4
Msa0521030 AT4G18020.9 34.559 136 80 3 6 134 12 145 5.03e-13 72.4
Msa0521030 AT2G20570.2 61.404 57 22 0 200 256 171 227 5.95e-16 81.3
Msa0521030 AT1G68670.1 31.818 154 90 4 181 333 198 337 7.45e-13 70.9
Msa0521030 AT4G13640.1 42.708 96 39 3 198 282 37 127 2.93e-12 68.2
Msa0521030 AT4G13640.2 42.708 96 39 3 198 282 37 127 3.05e-12 68.2
Msa0521030 AT1G49560.1 38.182 110 61 3 195 298 189 297 7.91e-12 67.4
Msa0521030 AT3G24120.1 42.105 95 39 3 198 281 41 130 1.24e-11 66.6
Msa0521030 AT3G24120.2 42.105 95 39 3 198 281 41 130 1.25e-11 66.6
Msa0521030 AT1G25550.1 51.667 60 28 1 197 255 208 267 1.44e-11 67.0
Msa0521030 AT3G04030.1 50.847 59 28 1 194 251 41 99 3.08e-11 66.2
Msa0521030 AT3G04030.3 50.847 59 28 1 194 251 41 99 3.52e-11 65.9
Msa0521030 AT2G03500.1 46.875 64 33 1 195 257 230 293 3.62e-11 66.2
Msa0521030 AT4G37180.1 49.180 61 30 1 196 255 208 268 4.70e-11 65.5
Msa0521030 AT4G37180.2 49.180 61 30 1 196 255 215 275 5.86e-11 65.1
Msa0521030 AT4G00760.1 27.670 206 121 8 30 215 1 198 7.33e-11 64.7
Msa0521030 AT1G10470.3 32.061 131 77 2 14 132 22 152 7.59e-11 63.5
Msa0521030 AT1G10470.1 32.061 131 77 2 14 132 36 166 8.58e-11 63.5

Find 185 sgRNAs with CRISPR-Local

Find 354 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCATTAGTTTAATGTTTA+AGG 0.058899 3_4:-73636192 Msa0521030:three_prime_UTR
CGTTGATCCGGGAATTTATT+TGG 0.160454 3_4:+73637801 None:intergenic
GCAAGATAAGATGAAATTAT+TGG 0.247006 3_4:-73636501 Msa0521030:CDS
TCCAACTTGTCTCATGGTTT+TGG 0.250920 3_4:-73640448 Msa0521030:CDS
TCAAGCGACGTACCGTTATC+TGG 0.285277 3_4:-73637582 Msa0521030:CDS
ACATTTGGCAGCATGTAATT+AGG 0.295640 3_4:-73638950 Msa0521030:CDS
TATCTTTGTGACAGGAGTTT+TGG 0.297920 3_4:-73636442 Msa0521030:exon
TCCAGCATGCTTCATTTGTA+TGG 0.304531 3_4:+73637230 None:intergenic
ATTCCTTGGGAGTGCATATC+TGG 0.307526 3_4:+73637447 None:intergenic
TATTTGAGAATGGGTGGTTC+TGG 0.310707 3_4:-73638125 Msa0521030:CDS
TTGAAGAGAAAGAATTTGTT+TGG 0.311046 3_4:+73637556 None:intergenic
CGTTAATCAGAATATTCTTC+AGG 0.324708 3_4:-73637922 Msa0521030:CDS
TGAACTTGTGGGACTTGAAA+TGG 0.326717 3_4:-73639222 Msa0521030:CDS
GCTAGTATGGTGGCAGCCTT+AGG 0.331673 3_4:-73638164 Msa0521030:CDS
GCAGAAAATTCAGATGAAAA+TGG 0.333558 3_4:-73638837 Msa0521030:CDS
GTTTCCATATAATTATTTCT+TGG 0.335612 3_4:+73636029 None:intergenic
GTTGATCCGGGAATTTATTT+GGG 0.335841 3_4:+73637802 None:intergenic
TCCCATCCCAAATAAATTCC+CGG 0.335864 3_4:-73637808 Msa0521030:CDS
TGGTAACGAGGGAAATGAAA+TGG 0.336379 3_4:+73640627 None:intergenic
CCCTTGCAAGCGGGGTATCC+TGG 0.337535 3_4:-73637480 Msa0521030:CDS
AATTGTTTAAATTACGTGAT+TGG 0.348210 3_4:+73637985 None:intergenic
GCAAAACTTGGCCGTTGATC+CGG 0.363698 3_4:+73637789 None:intergenic
AACTCTCTTGCTCCAGTTAA+CGG 0.366243 3_4:-73637315 Msa0521030:CDS
AGAAGAAGCCTCGGGTTGTT+TGG 0.367984 3_4:-73638728 Msa0521030:CDS
GCTACCAAGAAATAATTATA+TGG 0.369196 3_4:-73636033 Msa0521030:three_prime_UTR
TAGAGGAGCTAAAGAACATT+TGG 0.372140 3_4:-73638965 Msa0521030:CDS
CTGGAATTTAAGTTGATCAT+TGG 0.373200 3_4:+73637959 None:intergenic
TCCTTCGGGGCTTCTTCAGT+TGG 0.386130 3_4:-73638009 Msa0521030:CDS
CTGAAGAATATTCTGATTAA+CGG 0.389124 3_4:+73637923 None:intergenic
TCTTGGTTCACTGGAATACT+TGG 0.389557 3_4:-73637130 Msa0521030:CDS
AACGGTAATTTGCCATTTCA+AGG 0.393348 3_4:-73637396 Msa0521030:CDS
CTGCCACCATACTAGCTTGT+TGG 0.395940 3_4:+73638171 None:intergenic
CGGTCTTCCCATCCTTGAAA+TGG 0.402240 3_4:+73637384 None:intergenic
GAAAGAAAACACGGAGGTAT+AGG 0.402851 3_4:-73637699 Msa0521030:CDS
GCTGAAACCTGTGAGATTAG+AGG 0.402851 3_4:-73638982 Msa0521030:CDS
AACACTCCAACTAGTCTTAA+CGG 0.404206 3_4:-73638044 Msa0521030:CDS
TTCTAATAATCTTGGTTCAC+TGG 0.404941 3_4:-73637139 Msa0521030:CDS
ATTCTGATTAACGGGAGTTA+TGG 0.410279 3_4:+73637932 None:intergenic
TAATCTTTCGTTCTGACAGC+AGG 0.411338 3_4:+73636077 None:intergenic
CCTTCGGGGCTTCTTCAGTT+GGG 0.414763 3_4:-73638008 Msa0521030:CDS
CAAGATAAGATGAAATTATT+GGG 0.416183 3_4:-73636500 Msa0521030:CDS
ATTTCAGTGTTGTCTGCATA+TGG 0.417968 3_4:-73639056 Msa0521030:intron
GGTAACGAGGGAAATGAAAT+GGG 0.423435 3_4:+73640628 None:intergenic
CACGCATTCCGATGGGAAAA+CGG 0.428750 3_4:+73640490 None:intergenic
TTGGTAGCAACAATCCCTTC+AGG 0.429338 3_4:+73636048 None:intergenic
GAAAACTCCTAGGACAAAAC+TGG 0.429891 3_4:+73636339 None:intergenic
AAGGTAGGCACGGTGATAAT+TGG 0.437512 3_4:-73637605 Msa0521030:CDS
CGAGGCTTCTTCTGAGCTGA+TGG 0.438400 3_4:+73638738 None:intergenic
AAACACGGAGGTATAGGAAT+AGG 0.439930 3_4:-73637693 Msa0521030:CDS
TGCAAACCAACAAGCTAGTA+TGG 0.442595 3_4:-73638177 Msa0521030:CDS
AGGTGGAGCTAGTTGTTGTC+TGG 0.446742 3_4:+73637274 None:intergenic
AGATCAATCTTATTTGAGAA+TGG 0.446802 3_4:-73638135 Msa0521030:CDS
GAACTAGAGGTGGCAAAACT+TGG 0.447157 3_4:+73637777 None:intergenic
GTTGCTGCTGTTAATCAGTT+AGG 0.449852 3_4:-73638681 Msa0521030:CDS
TGAAGAATATTCTGATTAAC+GGG 0.453613 3_4:+73637924 None:intergenic
GATCAATCTTATTTGAGAAT+GGG 0.453918 3_4:-73638134 Msa0521030:CDS
ATCCGGGAATTTATTTGGGA+TGG 0.454627 3_4:+73637806 None:intergenic
AGCTTAAATCCATCCATGTC+AGG 0.455967 3_4:+73639248 None:intergenic
GGTAAGTAGCATCCTGATTA+CGG 0.456384 3_4:+73637364 None:intergenic
GACTAAGAAAAGAAAGGATC+AGG 0.456770 3_4:-73638808 Msa0521030:CDS
GCTTCTTTGCCCTTGCAAGC+GGG 0.456904 3_4:-73637489 Msa0521030:CDS
GGAGGTATAGGAATAGGATA+TGG 0.457148 3_4:-73637687 Msa0521030:CDS
TGCTGGCTTATGATATTAGC+TGG 0.457220 3_4:+73637168 None:intergenic
GGCTTCTTTGCCCTTGCAAG+CGG 0.465152 3_4:-73637490 Msa0521030:CDS
CAAAACTTGGCCGTTGATCC+GGG 0.465888 3_4:+73637790 None:intergenic
GAAGATGAGGATAAAGAGAA+TGG 0.467439 3_4:-73638777 Msa0521030:CDS
AATTCACCTGAGTATATAAA+CGG 0.467724 3_4:-73637414 Msa0521030:CDS
GAGCTAGTTGTTGTCTGGCC+TGG 0.468240 3_4:+73637279 None:intergenic
GATTATTAGAAAACTTCTGC+TGG 0.476268 3_4:+73637151 None:intergenic
TCCAAAACCATGAGACAAGT+TGG 0.479542 3_4:+73640447 None:intergenic
AATTATCCCACTAGGTGAAA+AGG 0.479567 3_4:+73638076 None:intergenic
ACACTCCAACTAGTCTTAAC+GGG 0.480069 3_4:-73638043 Msa0521030:CDS
CGACGATCCAACTTGTCTCA+TGG 0.481091 3_4:-73640454 Msa0521030:CDS
CCAGCATGCTTCATTTGTAT+GGG 0.481160 3_4:+73637231 None:intergenic
TTTAGCTCCTCTAATCTCAC+AGG 0.481770 3_4:+73638975 None:intergenic
AGGATGGGAAGACCGTAATC+AGG 0.483908 3_4:-73637376 Msa0521030:CDS
TTTAAGCTGCTTGAACTTGT+GGG 0.484142 3_4:-73639233 Msa0521030:CDS
ACCAGGATACCCCGCTTGCA+AGG 0.485505 3_4:+73637479 None:intergenic
AACAGAGAAAAGAGTGGTAA+TGG 0.486289 3_4:+73640572 None:intergenic
TGTTTGAGATACCGAGACTT+GGG 0.488772 3_4:+73637748 None:intergenic
TCCGGGAATTTATTTGGGAT+GGG 0.491640 3_4:+73637807 None:intergenic
CCATGCCCGTTAAGACTAGT+TGG 0.492442 3_4:+73638038 None:intergenic
CAGGGAATGCCAATGTCCAT+AGG 0.498172 3_4:-73637903 Msa0521030:CDS
CCCATACAAATGAAGCATGC+TGG 0.498373 3_4:-73637231 Msa0521030:CDS
GTTAATCAGAATATTCTTCA+GGG 0.498546 3_4:-73637921 Msa0521030:CDS
TCCGATGGGAAAACGGTCAC+CGG 0.502454 3_4:+73640497 None:intergenic
TCTTTCTCTATGCTGGATCA+AGG 0.503800 3_4:-73637624 Msa0521030:CDS
ATTGATAATTCCTCCTCTCA+TGG 0.508954 3_4:-73636377 Msa0521030:three_prime_UTR
GTAATTTGCCATTTCAAGGA+TGG 0.513037 3_4:-73637392 Msa0521030:CDS
GAAGAAGAAGTCTGATCCAA+AGG 0.514805 3_4:-73638928 Msa0521030:CDS
GACAAAACTACTTCTGATAG+TGG 0.516959 3_4:-73638882 Msa0521030:CDS
GAACGTGGCAAGCCATCTCC+AGG 0.523004 3_4:-73638319 Msa0521030:intron
TTTGTTTGGATTCCAGATAA+CGG 0.525042 3_4:+73637570 None:intergenic
ATTTAAGCTGCTTGAACTTG+TGG 0.531591 3_4:-73639234 Msa0521030:CDS
ATACTTGGCGAGTTCAATGA+TGG 0.533419 3_4:-73637115 Msa0521030:CDS
CTAGTATGGTGGCAGCCTTA+GGG 0.534344 3_4:-73638163 Msa0521030:CDS
TGTTATTGCTTGACTAGTTG+TGG 0.534638 3_4:+73639334 None:intergenic
CTAGTTGTTGTCTGGCCTGG+TGG 0.535200 3_4:+73637282 None:intergenic
CTTCTTTGCCCTTGCAAGCG+GGG 0.537483 3_4:-73637488 Msa0521030:CDS
ACTTGACTCTAACTTGACTC+TGG 0.537992 3_4:+73636285 None:intergenic
TAATTTGCCATTTCAAGGAT+GGG 0.541605 3_4:-73637391 Msa0521030:CDS
AAATTACCGTTTATATACTC+AGG 0.541639 3_4:+73637408 None:intergenic
GCCTCGGGTTGTTTGGTCTG+TGG 0.542268 3_4:-73638721 Msa0521030:CDS
GGCAGTGGACTAAGATCCGC+AGG 0.543371 3_4:-73638861 Msa0521030:CDS
TTGTTTGAGATACCGAGACT+TGG 0.548378 3_4:+73637747 None:intergenic
TAACGGGAGTTATGGCTGAC+TGG 0.548521 3_4:+73637940 None:intergenic
ACTACTTCTGATAGTGGCAG+TGG 0.549024 3_4:-73638876 Msa0521030:CDS
TACCACTCAAATGTTACTTG+TGG 0.549615 3_4:-73637345 Msa0521030:CDS
CGACGGGGTATCTTTGTGAC+AGG 0.549898 3_4:-73636450 Msa0521030:exon
TGTGCACATCACTGATTACC+AGG 0.551505 3_4:+73639273 None:intergenic
CATCAGCTCAGAAGAAGCCT+CGG 0.554303 3_4:-73638737 Msa0521030:CDS
GGCGAGAACACGCATTCCGA+TGG 0.558372 3_4:+73640482 None:intergenic
CCAGGATACCCCGCTTGCAA+GGG 0.561131 3_4:+73637480 None:intergenic
CAAATAAATTCCCGGATCAA+CGG 0.562184 3_4:-73637800 Msa0521030:CDS
AGTCTCGGTATCTCAAACAA+TGG 0.562603 3_4:-73637744 Msa0521030:CDS
CAGATAATCACAGGCACCAT+GGG 0.562735 3_4:+73639004 None:intergenic
GGCGAGTTCAATGATGGGAC+AGG 0.562860 3_4:-73637109 Msa0521030:intron
AAAGATTAAACGTGCCTGAA+GGG 0.564313 3_4:-73636062 Msa0521030:three_prime_UTR
CAATCTTATTTGAGAATGGG+TGG 0.565295 3_4:-73638131 Msa0521030:CDS
GAGGCTTCTTCTGAGCTGAT+GGG 0.565647 3_4:+73638739 None:intergenic
AAAGCTGACTAAGAAAAGAA+AGG 0.566687 3_4:-73638814 Msa0521030:CDS
AGGGAATGCCAATGTCCATA+GGG 0.567298 3_4:-73637902 Msa0521030:CDS
TTGCAAGTGATCAAACCCTA+TGG 0.568247 3_4:+73637887 None:intergenic
TCTCTATGCTGGATCAAGGT+AGG 0.568314 3_4:-73637620 Msa0521030:CDS
TGATCACTTGCAAAACAGCA+AGG 0.568375 3_4:-73637877 Msa0521030:CDS
AGATTGATCTGCACTCCCTA+AGG 0.568615 3_4:+73638148 None:intergenic
GACAACAACTAGCTCCACCT+TGG 0.570450 3_4:-73637271 Msa0521030:CDS
AATCTTTCGTTCTGACAGCA+GGG 0.578925 3_4:+73636078 None:intergenic
CTCAAACAATGGCTTGATGT+CGG 0.579465 3_4:-73637733 Msa0521030:CDS
TGTTCCTCCTTCAGATAACA+TGG 0.580834 3_4:-73637511 Msa0521030:CDS
ATCCCACAAAGAAAACTCCT+AGG 0.581413 3_4:+73636329 None:intergenic
ATCAGCTCAGAAGAAGCCTC+GGG 0.581453 3_4:-73638736 Msa0521030:CDS
GAAAGATTAAACGTGCCTGA+AGG 0.583000 3_4:-73636063 Msa0521030:three_prime_UTR
TATGCGATAATTACTCCGAC+GGG 0.584211 3_4:-73636466 Msa0521030:CDS
AGATCCCCACTTACTTATGA+CGG 0.584541 3_4:+73639193 None:intergenic
CCAACTAGTCTTAACGGGCA+TGG 0.588692 3_4:-73638038 Msa0521030:CDS
GTTTGAGATACCGAGACTTG+GGG 0.591845 3_4:+73637749 None:intergenic
GCAGATAATCACAGGCACCA+TGG 0.592029 3_4:+73639003 None:intergenic
TGATCAAACCCTATGGACAT+TGG 0.593062 3_4:+73637894 None:intergenic
TGCATATGGTGATACAAAGC+TGG 0.593897 3_4:-73639042 Msa0521030:CDS
GATCCCCACTTACTTATGAC+GGG 0.593976 3_4:+73639194 None:intergenic
AGAAAATTCTGAATGTTGAG+AGG 0.594209 3_4:+73637644 None:intergenic
ATATGCGATAATTACTCCGA+CGG 0.598221 3_4:-73636467 Msa0521030:CDS
GTGCACATGCCTGACATGGA+TGG 0.600433 3_4:-73639257 Msa0521030:CDS
CCCAACTGAAGAAGCCCCGA+AGG 0.603189 3_4:+73638008 None:intergenic
AAATAGCATGTGTCCATGAG+AGG 0.605548 3_4:+73636364 None:intergenic
AGATTACCAATTATCCCACT+AGG 0.605896 3_4:+73638068 None:intergenic
AAAGAAGCCATGTTATCTGA+AGG 0.609057 3_4:+73637504 None:intergenic
AGGTTTCAGCAGATAATCAC+AGG 0.609824 3_4:+73638995 None:intergenic
GATCACTTGCAAAACAGCAA+GGG 0.610593 3_4:-73637876 Msa0521030:CDS
TGAGCTGCATTCAGTTAACT+CGG 0.614968 3_4:+73637203 None:intergenic
TGATGTGCACATGCCTGACA+TGG 0.615041 3_4:-73639261 Msa0521030:CDS
TCAGGATGAAGACGAAGATG+AGG 0.615403 3_4:-73638790 Msa0521030:CDS
ACAAGTTGGATCGTCGTCAA+CGG 0.615563 3_4:+73640461 None:intergenic
GCGAGAACACGCATTCCGAT+GGG 0.617268 3_4:+73640483 None:intergenic
GACCGTGGTATTGACATCTA+CGG 0.617438 3_4:+73640415 None:intergenic
ATATCTGGCAACGAACCACC+AGG 0.619562 3_4:+73637462 None:intergenic
TTGCCAGATATGCACTCCCA+AGG 0.620552 3_4:-73637450 Msa0521030:CDS
ATGCTGGATCAAGGTAGGCA+CGG 0.622381 3_4:-73637615 Msa0521030:CDS
GATAAGATGAAATTATTGGG+TGG 0.625103 3_4:-73636497 Msa0521030:CDS
ATCCACAAGTAACATTTGAG+TGG 0.625700 3_4:+73637343 None:intergenic
CCCACTTACTTATGACGGGA+AGG 0.626480 3_4:+73639198 None:intergenic
GAAGCCATGTTATCTGAAGG+AGG 0.632238 3_4:+73637507 None:intergenic
GATACAAAGCTGGTGATGAA+AGG 0.634012 3_4:-73639032 Msa0521030:CDS
ATCTTTCGTTCTGACAGCAG+GGG 0.641270 3_4:+73636079 None:intergenic
AAATATCACAAGGGAGAACG+TGG 0.641409 3_4:-73638334 Msa0521030:CDS
TACTTGGCGAGTTCAATGAT+GGG 0.644216 3_4:-73637114 Msa0521030:CDS
TTGCAAGCGGGGTATCCTGG+TGG 0.644472 3_4:-73637477 Msa0521030:CDS
TAGCATGTGTCCATGAGAGG+AGG 0.648867 3_4:+73636367 None:intergenic
TAACAGCAGCAACAAACTTG+CGG 0.664827 3_4:+73638691 None:intergenic
TCCACAGACCAAACAACCCG+AGG 0.670707 3_4:+73638720 None:intergenic
AAACAAAGACAAGTTTGACC+TGG 0.671629 3_4:-73639291 Msa0521030:CDS
CTCCGTAGATGTCAATACCA+CGG 0.676022 3_4:-73640417 Msa0521030:intron
TTTGAGATACCGAGACTTGG+GGG 0.680383 3_4:+73637750 None:intergenic
CAATCTAGAATTCATCAATG+AGG 0.682137 3_4:+73636396 None:intergenic
TGAATGTCGAAAATATCACA+AGG 0.689686 3_4:-73638344 Msa0521030:CDS
GTGATGAAAGGAATTTCCCA+TGG 0.694201 3_4:-73639020 Msa0521030:CDS
ACGCACCCTGAAAGAAAACA+CGG 0.699020 3_4:-73637708 Msa0521030:CDS
CTATGAAACAGAGAAAAGAG+TGG 0.699177 3_4:+73640566 None:intergenic
AAACCAACAAGCTAGTATGG+TGG 0.708833 3_4:-73638174 Msa0521030:CDS
GAATGTCGAAAATATCACAA+GGG 0.725612 3_4:-73638343 Msa0521030:CDS
CTGTCACAAAGATACCCCGT+CGG 0.726754 3_4:+73636451 None:intergenic
ATGCGATAATTACTCCGACG+GGG 0.780483 3_4:-73636465 Msa0521030:CDS
AGAGAATGGTAATGACAACG+AGG 0.788270 3_4:-73638763 Msa0521030:CDS
CACCCTGAAAGAAAACACGG+AGG 0.809478 3_4:-73637705 Msa0521030:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTATTTGAATTTC+TGG + chr3_4:73636424-73636443 None:intergenic 10.0%
!! ATAAAAAAAAACATGTCTTT+AGG - chr3_4:73636433-73636452 Msa0521030:three_prime_UTR 15.0%
!!! ATATATTTCATTTTGTTTAG+TGG - chr3_4:73636868-73636887 Msa0521030:intron 15.0%
!! TCAAAATGAATAAATAGAAA+AGG + chr3_4:73637514-73637533 None:intergenic 15.0%
!!! ATCATATCAAGAATTTTTTT+GGG + chr3_4:73638285-73638304 None:intergenic 15.0%
!! ATTAAAAAATTTAGTATCCA+AGG + chr3_4:73639397-73639416 None:intergenic 15.0%
!!! ACATTTTTTGAATATAATGT+TGG - chr3_4:73639567-73639586 Msa0521030:intron 15.0%
!! TGAAATTTGAAGATTTAAAT+TGG - chr3_4:73639808-73639827 Msa0521030:intron 15.0%
!!! CAATTTTTACAGATTTTATG+TGG - chr3_4:73636634-73636653 Msa0521030:intron 20.0%
!! ATATCTAGTAAAAATATGCT+TGG + chr3_4:73636770-73636789 None:intergenic 20.0%
!!! TATTTTTACTAGATATGTGA+AGG - chr3_4:73636774-73636793 Msa0521030:intron 20.0%
!! ATTAACACCAAAACAAAAAA+TGG + chr3_4:73636924-73636943 None:intergenic 20.0%
!!! TCAAAATGTTTTTGAATATC+TGG - chr3_4:73638090-73638109 Msa0521030:CDS 20.0%
!! ATAATACTCAAATTCAGTAA+TGG + chr3_4:73638229-73638248 None:intergenic 20.0%
!!! CATCATATCAAGAATTTTTT+TGG + chr3_4:73638286-73638305 None:intergenic 20.0%
!! AATTGTTTAAATTACGTGAT+TGG + chr3_4:73638666-73638685 None:intergenic 20.0%
!! ATTAGTAAAAATCATTCCTT+GGG + chr3_4:73639217-73639236 None:intergenic 20.0%
!! AATTAGTAAAAATCATTCCT+TGG + chr3_4:73639218-73639237 None:intergenic 20.0%
!!! TGTATAGTTTTTTTTGCATA+TGG - chr3_4:73639626-73639645 Msa0521030:intron 20.0%
!! AATTTGAAGATTTAAATTGG+TGG - chr3_4:73639811-73639830 Msa0521030:intron 20.0%
!! AAGAACATCAATGAAATATA+TGG + chr3_4:73639864-73639883 None:intergenic 20.0%
!!! CATGTTGTTTTATTTAACTT+AGG - chr3_4:73640009-73640028 Msa0521030:intron 20.0%
!! CAAGATAAGATGAAATTATT+GGG - chr3_4:73640148-73640167 Msa0521030:intron 20.0%
!!! TCTCATTAGTTTAATGTTTA+AGG - chr3_4:73640456-73640475 Msa0521030:CDS 20.0%
!!! GTTTCCATATAATTATTTCT+TGG + chr3_4:73640622-73640641 None:intergenic 20.0%
!!! ATGATTAATTTTGGTAACGA+GGG + chr3_4:73636035-73636054 None:intergenic 25.0%
!!! AATGATTAATTTTGGTAACG+AGG + chr3_4:73636036-73636055 None:intergenic 25.0%
! AACGATATTGTGTAGATATT+TGG - chr3_4:73636493-73636512 Msa0521030:CDS 25.0%
!! GGAACTTTTACTAAGAATAA+AGG - chr3_4:73636514-73636533 Msa0521030:intron 25.0%
! ATGAAAAGAGTCATGATTTA+GGG - chr3_4:73636541-73636560 Msa0521030:intron 25.0%
! TGTTTCTTTATACTATCACA+GGG + chr3_4:73636616-73636635 None:intergenic 25.0%
!! TTGTTTCTTTATACTATCAC+AGG + chr3_4:73636617-73636636 None:intergenic 25.0%
! CAAAGACAAGAAAAGAAAAA+TGG + chr3_4:73637124-73637143 None:intergenic 25.0%
! TACTAATCATGAAGAAATAC+AGG + chr3_4:73637180-73637199 None:intergenic 25.0%
!!! AAGTGATACTTATTTCTGAT+TGG - chr3_4:73637279-73637298 Msa0521030:CDS 25.0%
!!! AGTGATACTTATTTCTGATT+GGG - chr3_4:73637280-73637299 Msa0521030:CDS 25.0%
! AAGAAAAAAATTAACAGCTG+AGG + chr3_4:73637491-73637510 None:intergenic 25.0%
!!! TCATTTTGACTCTTGTTTAT+TGG - chr3_4:73637525-73637544 Msa0521030:CDS 25.0%
! ATAAAAATTGTTTGTGTTGC+AGG + chr3_4:73638018-73638037 None:intergenic 25.0%
!!! CGATGTTTATTTTAAATCCT+AGG - chr3_4:73638115-73638134 Msa0521030:CDS 25.0%
!!! TCATAAGTCATTTTAAACCT+AGG + chr3_4:73638135-73638154 None:intergenic 25.0%
! TAATGGAATACTTTATGACA+TGG + chr3_4:73638212-73638231 None:intergenic 25.0%
! TAAAGAACTAGAAAAATACC+TGG + chr3_4:73638350-73638369 None:intergenic 25.0%
! ATTTCTTTCACTGAATGTTT+CGG - chr3_4:73638394-73638413 Msa0521030:intron 25.0%
!! AGATCAATCTTATTTGAGAA+TGG - chr3_4:73638513-73638532 Msa0521030:intron 25.0%
!! GATCAATCTTATTTGAGAAT+GGG - chr3_4:73638514-73638533 Msa0521030:intron 25.0%
! TGAAGAATATTCTGATTAAC+GGG + chr3_4:73638727-73638746 None:intergenic 25.0%
! CTGAAGAATATTCTGATTAA+CGG + chr3_4:73638728-73638747 None:intergenic 25.0%
! GTTAATCAGAATATTCTTCA+GGG - chr3_4:73638727-73638746 Msa0521030:CDS 25.0%
!! TTGAAGAGAAAGAATTTGTT+TGG + chr3_4:73639095-73639114 None:intergenic 25.0%
! AATTCACCTGAGTATATAAA+CGG - chr3_4:73639234-73639253 Msa0521030:CDS 25.0%
! AAATTACCGTTTATATACTC+AGG + chr3_4:73639243-73639262 None:intergenic 25.0%
! AAAAAATTTAGTATCCAAGG+TGG + chr3_4:73639394-73639413 None:intergenic 25.0%
!! CAGAAGTTTTCTAATAATCT+TGG - chr3_4:73639501-73639520 Msa0521030:intron 25.0%
!!! AATGATTTTAAGTCTTCTCT+CGG + chr3_4:73639775-73639794 None:intergenic 25.0%
!!! AAACATTTGTTTTTCTATCC+TGG - chr3_4:73639953-73639972 Msa0521030:intron 25.0%
!! AAGCAAAATATTTAGGACAA+GGG + chr3_4:73640090-73640109 None:intergenic 25.0%
! GCAAGATAAGATGAAATTAT+TGG - chr3_4:73640147-73640166 Msa0521030:intron 25.0%
! GCTACCAAGAAATAATTATA+TGG - chr3_4:73640615-73640634 Msa0521030:five_prime_UTR 25.0%
!! ACTGATTTGTGAGAGAAAAA+TGG - chr3_4:73636122-73636141 Msa0521030:three_prime_UTR 30.0%
!! TCTTTAGGATCAAATCTAAC+TGG - chr3_4:73636448-73636467 Msa0521030:exon 30.0%
!! CTTTAGGATCAAATCTAACT+GGG - chr3_4:73636449-73636468 Msa0521030:exon 30.0%
GATGAAAAGAGTCATGATTT+AGG - chr3_4:73636540-73636559 Msa0521030:intron 30.0%
AAGTCAACACACTATGAATT+TGG + chr3_4:73636576-73636595 None:intergenic 30.0%
ACTTAATTATGTGCTTGCTT+GGG - chr3_4:73636736-73636755 Msa0521030:intron 30.0%
! AAGCAATGAAGCTCTAATTA+CGG + chr3_4:73636805-73636824 None:intergenic 30.0%
!! TTCATTTTGTTTAGTGGCTT+TGG - chr3_4:73636874-73636893 Msa0521030:intron 30.0%
!!! TGGTCAACCATTTTTTGTTT+TGG - chr3_4:73636914-73636933 Msa0521030:intron 30.0%
TTGACTATAACCAAGTGATT+GGG + chr3_4:73637101-73637120 None:intergenic 30.0%
!! TTCACTGTTGCTTTCTTTAT+TGG - chr3_4:73637218-73637237 Msa0521030:CDS 30.0%
!! GTGATACTTATTTCTGATTG+GGG - chr3_4:73637281-73637300 Msa0521030:CDS 30.0%
GCAGAAAATTCAGATGAAAA+TGG - chr3_4:73637811-73637830 Msa0521030:CDS 30.0%
AAAGCTGACTAAGAAAAGAA+AGG - chr3_4:73637834-73637853 Msa0521030:CDS 30.0%
ATAAAATTCAGTAAAGCTCG+AGG + chr3_4:73638054-73638073 None:intergenic 30.0%
!!! TAATGTTGTTTTACTTGCAG+AGG - chr3_4:73638254-73638273 Msa0521030:intron 30.0%
TGAATGTCGAAAATATCACA+AGG - chr3_4:73638304-73638323 Msa0521030:intron 30.0%
GAATGTCGAAAATATCACAA+GGG - chr3_4:73638305-73638324 Msa0521030:intron 30.0%
GAAACATTCAGTGAAAGAAA+TGG + chr3_4:73638395-73638414 None:intergenic 30.0%
TTTCTTTCACTGAATGTTTC+GGG - chr3_4:73638395-73638414 Msa0521030:intron 30.0%
!! AATGTTTCGGGTTTATGAAA+TGG - chr3_4:73638407-73638426 Msa0521030:intron 30.0%
!! CTGGAATTTAAGTTGATCAT+TGG + chr3_4:73638692-73638711 None:intergenic 30.0%
CGTTAATCAGAATATTCTTC+AGG - chr3_4:73638726-73638745 Msa0521030:CDS 30.0%
! TTGTTTTCACATCAGTATTC+AGG + chr3_4:73638816-73638835 None:intergenic 30.0%
AGAAAATTCTGAATGTTGAG+AGG + chr3_4:73639007-73639026 None:intergenic 30.0%
! AGAATTTTCTTTCTCTATGC+TGG - chr3_4:73639017-73639036 Msa0521030:CDS 30.0%
TTTGTTTGGATTCCAGATAA+CGG + chr3_4:73639081-73639100 None:intergenic 30.0%
! TAATTTGCCATTTCAAGGAT+GGG - chr3_4:73639257-73639276 Msa0521030:CDS 30.0%
GATTATTAGAAAACTTCTGC+TGG + chr3_4:73639500-73639519 None:intergenic 30.0%
TTCTAATAATCTTGGTTCAC+TGG - chr3_4:73639509-73639528 Msa0521030:intron 30.0%
CAAGGAAATAATGTTTGAGA+TGG + chr3_4:73639665-73639684 None:intergenic 30.0%
!! ATGATTTTAAGTCTTCTCTC+GGG + chr3_4:73639774-73639793 None:intergenic 30.0%
TTCATTGATGTTCTTTGTGA+TGG - chr3_4:73639869-73639888 Msa0521030:intron 30.0%
ATCCTATGTGAATGTTCTAA+AGG + chr3_4:73639931-73639950 None:intergenic 30.0%
!! TTTGTTTTTCTATCCTGGAT+TGG - chr3_4:73639958-73639977 Msa0521030:intron 30.0%
ACAACATGCTATATACTCAA+CGG + chr3_4:73639997-73640016 None:intergenic 30.0%
! AGCAAAATATTTAGGACAAG+GGG + chr3_4:73640089-73640108 None:intergenic 30.0%
! GAAGCAAAATATTTAGGACA+AGG + chr3_4:73640091-73640110 None:intergenic 30.0%
! TCCTAAATATTTTGCTTCCA+TGG - chr3_4:73640093-73640112 Msa0521030:intron 30.0%
ACCATGGAAGCAAAATATTT+AGG + chr3_4:73640097-73640116 None:intergenic 30.0%
AACATGGTATCAAATTACCA+TGG + chr3_4:73640113-73640132 None:intergenic 30.0%
GATAAGATGAAATTATTGGG+TGG - chr3_4:73640151-73640170 Msa0521030:intron 30.0%
! CAATCTAGAATTCATCAATG+AGG + chr3_4:73640255-73640274 None:intergenic 30.0%
!! TATTTAACCAGTTTTGTCCT+AGG - chr3_4:73640302-73640321 Msa0521030:intron 30.0%
AACAGAGAAAAGAGTGGTAA+TGG + chr3_4:73636079-73636098 None:intergenic 35.0%
CTATGAAACAGAGAAAAGAG+TGG + chr3_4:73636085-73636104 None:intergenic 35.0%
GAGAGAAAAATGGATGATTC+CGG - chr3_4:73636132-73636151 Msa0521030:three_prime_UTR 35.0%
GATCAAATCTAACTGGGAAA+TGG - chr3_4:73636455-73636474 Msa0521030:CDS 35.0%
CACTTAATTATGTGCTTGCT+TGG - chr3_4:73636735-73636754 Msa0521030:intron 35.0%
! ATGAGCAACTTTTCCTACTA+CGG + chr3_4:73636840-73636859 None:intergenic 35.0%
TGGACTGAATATGCACTTTA+TGG - chr3_4:73636894-73636913 Msa0521030:intron 35.0%
TGACTAAACTCCGGAATATT+AGG + chr3_4:73636989-73637008 None:intergenic 35.0%
TAATATTCCGGAGTTTAGTC+AGG - chr3_4:73636988-73637007 Msa0521030:intron 35.0%
AATATTCCGGAGTTTAGTCA+GGG - chr3_4:73636989-73637008 Msa0521030:intron 35.0%
GTTGACTATAACCAAGTGAT+TGG + chr3_4:73637102-73637121 None:intergenic 35.0%
! ACTGTTGTTGCTTAGATTTC+AGG - chr3_4:73637152-73637171 Msa0521030:CDS 35.0%
! TGTTATTGCTTGACTAGTTG+TGG + chr3_4:73637317-73637336 None:intergenic 35.0%
!!! GTCTTTGTTTTCTCTCAACA+TGG + chr3_4:73637347-73637366 None:intergenic 35.0%
AAACAAAGACAAGTTTGACC+TGG - chr3_4:73637357-73637376 Msa0521030:CDS 35.0%
ATTTAAGCTGCTTGAACTTG+TGG - chr3_4:73637414-73637433 Msa0521030:CDS 35.0%
TTTAAGCTGCTTGAACTTGT+GGG - chr3_4:73637415-73637434 Msa0521030:CDS 35.0%
ATTTCAGTGTTGTCTGCATA+TGG - chr3_4:73637592-73637611 Msa0521030:CDS 35.0%
TAGAGGAGCTAAAGAACATT+TGG - chr3_4:73637683-73637702 Msa0521030:CDS 35.0%
ACATTTGGCAGCATGTAATT+AGG - chr3_4:73637698-73637717 Msa0521030:CDS 35.0%
!!! CTGGTTTTGTTTTTCTCCTT+TGG + chr3_4:73637739-73637758 None:intergenic 35.0%
!!! AGTAGTTTTGTCTGGTTTAC+TGG + chr3_4:73637758-73637777 None:intergenic 35.0%
!!! CTATCAGAAGTAGTTTTGTC+TGG + chr3_4:73637766-73637785 None:intergenic 35.0%
GACAAAACTACTTCTGATAG+TGG - chr3_4:73637766-73637785 Msa0521030:CDS 35.0%
GACTAAGAAAAGAAAGGATC+AGG - chr3_4:73637840-73637859 Msa0521030:CDS 35.0%
GAAGATGAGGATAAAGAGAA+TGG - chr3_4:73637871-73637890 Msa0521030:CDS 35.0%
TTATGATGATAGATGCCACT+TGG - chr3_4:73638149-73638168 Msa0521030:CDS 35.0%
! TATGATGATAGATGCCACTT+GGG - chr3_4:73638150-73638169 Msa0521030:CDS 35.0%
GAAATGAAATTCATCCCAAG+TGG + chr3_4:73638167-73638186 None:intergenic 35.0%
ACTAGAAAAATACCTGGAGA+TGG + chr3_4:73638344-73638363 None:intergenic 35.0%
! CAATCTTATTTGAGAATGGG+TGG - chr3_4:73638517-73638536 Msa0521030:intron 35.0%
AATTATCCCACTAGGTGAAA+AGG + chr3_4:73638575-73638594 None:intergenic 35.0%
! TTTTCACCTAGTGGGATAAT+TGG - chr3_4:73638574-73638593 Msa0521030:intron 35.0%
AGATTACCAATTATCCCACT+AGG + chr3_4:73638583-73638602 None:intergenic 35.0%
!! AACACTCCAACTAGTCTTAA+CGG - chr3_4:73638604-73638623 Msa0521030:intron 35.0%
ATTCTGATTAACGGGAGTTA+TGG + chr3_4:73638719-73638738 None:intergenic 35.0%
GTTGATCCGGGAATTTATTT+GGG + chr3_4:73638849-73638868 None:intergenic 35.0%
CAAATAAATTCCCGGATCAA+CGG - chr3_4:73638848-73638867 Msa0521030:CDS 35.0%
AAAGAAGCCATGTTATCTGA+AGG + chr3_4:73639147-73639166 None:intergenic 35.0%
! AACGGTAATTTGCCATTTCA+AGG - chr3_4:73639252-73639271 Msa0521030:CDS 35.0%
! GTAATTTGCCATTTCAAGGA+TGG - chr3_4:73639256-73639275 Msa0521030:CDS 35.0%
! TACCACTCAAATGTTACTTG+TGG - chr3_4:73639303-73639322 Msa0521030:CDS 35.0%
ATCCACAAGTAACATTTGAG+TGG + chr3_4:73639308-73639327 None:intergenic 35.0%
TTCCCATAAATGCTTCTGTA+TGG - chr3_4:73639592-73639611 Msa0521030:intron 35.0%
!! AGCCATACAGAAGCATTTAT+GGG + chr3_4:73639597-73639616 None:intergenic 35.0%
!! AAGCCATACAGAAGCATTTA+TGG + chr3_4:73639598-73639617 None:intergenic 35.0%
CTAATCAGTATGTGTGATCA+AGG + chr3_4:73639683-73639702 None:intergenic 35.0%
ACAAATATAACCATGCTGAC+TGG + chr3_4:73639745-73639764 None:intergenic 35.0%
CTAAAGGACATCGAAAGTTA+CGG + chr3_4:73639915-73639934 None:intergenic 35.0%
!! GTCCTTTAGAACATTCACAT+AGG - chr3_4:73639926-73639945 Msa0521030:intron 35.0%
ACAAGTTATTGTACCAATCC+AGG + chr3_4:73639974-73639993 None:intergenic 35.0%
TAAAGTATGCAATGCTCGTT+TGG - chr3_4:73640043-73640062 Msa0521030:intron 35.0%
ATATGCGATAATTACTCCGA+CGG - chr3_4:73640181-73640200 Msa0521030:intron 35.0%
! TATCTTTGTGACAGGAGTTT+TGG - chr3_4:73640206-73640225 Msa0521030:intron 35.0%
! ATTGATAATTCCTCCTCTCA+TGG - chr3_4:73640271-73640290 Msa0521030:intron 35.0%
! CTTGACTCTGGAAAAAGAAA+AGG + chr3_4:73640354-73640373 None:intergenic 35.0%
AAAGATTAAACGTGCCTGAA+GGG - chr3_4:73640586-73640605 Msa0521030:five_prime_UTR 35.0%
GGTAACGAGGGAAATGAAAT+GGG + chr3_4:73636023-73636042 None:intergenic 40.0%
! TGGTAACGAGGGAAATGAAA+TGG + chr3_4:73636024-73636043 None:intergenic 40.0%
! TCCAACTTGTCTCATGGTTT+TGG - chr3_4:73636200-73636219 Msa0521030:three_prime_UTR 40.0%
TCCAAAACCATGAGACAAGT+TGG + chr3_4:73636204-73636223 None:intergenic 40.0%
TCTAACTGGGAAATGGAGTT+AGG - chr3_4:73636462-73636481 Msa0521030:CDS 40.0%
! GAGTCATGATTTAGGGTCAA+AGG - chr3_4:73636548-73636567 Msa0521030:intron 40.0%
TAGAGCTTCATTGCTTGTAG+AGG - chr3_4:73636809-73636828 Msa0521030:intron 40.0%
CTAAACTCCGGAATATTAGG+AGG + chr3_4:73636986-73637005 None:intergenic 40.0%
TGATTGGGATCAAGAGGTTA+AGG + chr3_4:73637086-73637105 None:intergenic 40.0%
AGCTTAAATCCATCCATGTC+AGG + chr3_4:73637403-73637422 None:intergenic 40.0%
TGAACTTGTGGGACTTGAAA+TGG - chr3_4:73637426-73637445 Msa0521030:CDS 40.0%
AGATCCCCACTTACTTATGA+CGG + chr3_4:73637458-73637477 None:intergenic 40.0%
TGCATATGGTGATACAAAGC+TGG - chr3_4:73637606-73637625 Msa0521030:CDS 40.0%
! GATACAAAGCTGGTGATGAA+AGG - chr3_4:73637616-73637635 Msa0521030:CDS 40.0%
GTGATGAAAGGAATTTCCCA+TGG - chr3_4:73637628-73637647 Msa0521030:CDS 40.0%
AGGTTTCAGCAGATAATCAC+AGG + chr3_4:73637656-73637675 None:intergenic 40.0%
! TTTAGCTCCTCTAATCTCAC+AGG + chr3_4:73637676-73637695 None:intergenic 40.0%
GAAGAAGAAGTCTGATCCAA+AGG - chr3_4:73637720-73637739 Msa0521030:CDS 40.0%
! ATCTGAATTTTCTGCTCCTG+CGG + chr3_4:73637806-73637825 None:intergenic 40.0%
! AGAGAATGGTAATGACAACG+AGG - chr3_4:73637885-73637904 Msa0521030:CDS 40.0%
TAACAGCAGCAACAAACTTG+CGG + chr3_4:73637960-73637979 None:intergenic 40.0%
GTTGCTGCTGTTAATCAGTT+AGG - chr3_4:73637967-73637986 Msa0521030:CDS 40.0%
AAATATCACAAGGGAGAACG+TGG - chr3_4:73638314-73638333 Msa0521030:intron 40.0%
TGCAAACCAACAAGCTAGTA+TGG - chr3_4:73638471-73638490 Msa0521030:intron 40.0%
AAACCAACAAGCTAGTATGG+TGG - chr3_4:73638474-73638493 Msa0521030:intron 40.0%
TATTTGAGAATGGGTGGTTC+TGG - chr3_4:73638523-73638542 Msa0521030:intron 40.0%
! TTCAGATCCTTTTCACCTAG+TGG - chr3_4:73638565-73638584 Msa0521030:intron 40.0%
! TCAGATCCTTTTCACCTAGT+GGG - chr3_4:73638566-73638585 Msa0521030:intron 40.0%
!! ACACTCCAACTAGTCTTAAC+GGG - chr3_4:73638605-73638624 Msa0521030:intron 40.0%
TGATCAAACCCTATGGACAT+TGG + chr3_4:73638757-73638776 None:intergenic 40.0%
TTGCAAGTGATCAAACCCTA+TGG + chr3_4:73638764-73638783 None:intergenic 40.0%
TGATCACTTGCAAAACAGCA+AGG - chr3_4:73638771-73638790 Msa0521030:CDS 40.0%
GATCACTTGCAAAACAGCAA+GGG - chr3_4:73638772-73638791 Msa0521030:CDS 40.0%
TCCCATCCCAAATAAATTCC+CGG - chr3_4:73638840-73638859 Msa0521030:CDS 40.0%
! TCCGGGAATTTATTTGGGAT+GGG + chr3_4:73638844-73638863 None:intergenic 40.0%
ATCCGGGAATTTATTTGGGA+TGG + chr3_4:73638845-73638864 None:intergenic 40.0%
CGTTGATCCGGGAATTTATT+TGG + chr3_4:73638850-73638869 None:intergenic 40.0%
! TGTTTGAGATACCGAGACTT+GGG + chr3_4:73638903-73638922 None:intergenic 40.0%
! TTGTTTGAGATACCGAGACT+TGG + chr3_4:73638904-73638923 None:intergenic 40.0%
AGTCTCGGTATCTCAAACAA+TGG - chr3_4:73638904-73638923 Msa0521030:CDS 40.0%
CTCAAACAATGGCTTGATGT+CGG - chr3_4:73638915-73638934 Msa0521030:CDS 40.0%
! TACCTCCGTGTTTTCTTTCA+GGG + chr3_4:73638948-73638967 None:intergenic 40.0%
! ATACCTCCGTGTTTTCTTTC+AGG + chr3_4:73638949-73638968 None:intergenic 40.0%
! GAAAGAAAACACGGAGGTAT+AGG - chr3_4:73638949-73638968 Msa0521030:CDS 40.0%
! AAACACGGAGGTATAGGAAT+AGG - chr3_4:73638955-73638974 Msa0521030:CDS 40.0%
! GGAGGTATAGGAATAGGATA+TGG - chr3_4:73638961-73638980 Msa0521030:CDS 40.0%
TCTTTCTCTATGCTGGATCA+AGG - chr3_4:73639024-73639043 Msa0521030:CDS 40.0%
TGTTCCTCCTTCAGATAACA+TGG - chr3_4:73639137-73639156 Msa0521030:intron 40.0%
GGTAAGTAGCATCCTGATTA+CGG + chr3_4:73639287-73639306 None:intergenic 40.0%
AACTCTCTTGCTCCAGTTAA+CGG - chr3_4:73639333-73639352 Msa0521030:CDS 40.0%
CCAGCATGCTTCATTTGTAT+GGG + chr3_4:73639420-73639439 None:intergenic 40.0%
TCCAGCATGCTTCATTTGTA+TGG + chr3_4:73639421-73639440 None:intergenic 40.0%
TGAGCTGCATTCAGTTAACT+CGG + chr3_4:73639448-73639467 None:intergenic 40.0%
!! TGCTGGCTTATGATATTAGC+TGG + chr3_4:73639483-73639502 None:intergenic 40.0%
TCTTGGTTCACTGGAATACT+TGG - chr3_4:73639518-73639537 Msa0521030:intron 40.0%
ATACTTGGCGAGTTCAATGA+TGG - chr3_4:73639533-73639552 Msa0521030:intron 40.0%
TACTTGGCGAGTTCAATGAT+GGG - chr3_4:73639534-73639553 Msa0521030:intron 40.0%
CGAAAGTTACGGTGGTTAAT+TGG + chr3_4:73639904-73639923 None:intergenic 40.0%
ATACCATGTTCATGACATGC+AGG - chr3_4:73640123-73640142 Msa0521030:intron 40.0%
TATGCGATAATTACTCCGAC+GGG - chr3_4:73640182-73640201 Msa0521030:intron 40.0%
AAATAGCATGTGTCCATGAG+AGG + chr3_4:73640287-73640306 None:intergenic 40.0%
GAAAACTCCTAGGACAAAAC+TGG + chr3_4:73640312-73640331 None:intergenic 40.0%
! TGTCCTAGGAGTTTTCTTTG+TGG - chr3_4:73640316-73640335 Msa0521030:intron 40.0%
! GTCCTAGGAGTTTTCTTTGT+GGG - chr3_4:73640317-73640336 Msa0521030:intron 40.0%
ATCCCACAAAGAAAACTCCT+AGG + chr3_4:73640322-73640341 None:intergenic 40.0%
ACTTGACTCTAACTTGACTC+TGG + chr3_4:73640366-73640385 None:intergenic 40.0%
AATCTTTCGTTCTGACAGCA+GGG + chr3_4:73640573-73640592 None:intergenic 40.0%
TAATCTTTCGTTCTGACAGC+AGG + chr3_4:73640574-73640593 None:intergenic 40.0%
GAAAGATTAAACGTGCCTGA+AGG - chr3_4:73640585-73640604 Msa0521030:five_prime_UTR 40.0%
! ACAAGTTGGATCGTCGTCAA+CGG + chr3_4:73636190-73636209 None:intergenic 45.0%
CTCCGTAGATGTCAATACCA+CGG - chr3_4:73636231-73636250 Msa0521030:three_prime_UTR 45.0%
!! GACCGTGGTATTGACATCTA+CGG + chr3_4:73636236-73636255 None:intergenic 45.0%
GTCAATACCACGGTCAGATT+CGG - chr3_4:73636241-73636260 Msa0521030:three_prime_UTR 45.0%
TGTAGAGGTAGTACCGTAGT+AGG - chr3_4:73636824-73636843 Msa0521030:intron 45.0%
TTACCTCCCTGACTAAACTC+CGG + chr3_4:73636998-73637017 None:intergenic 45.0%
GTCAGGGAGGTAATTGAACT+CGG - chr3_4:73637005-73637024 Msa0521030:intron 45.0%
TCAGGGAGGTAATTGAACTC+GGG - chr3_4:73637006-73637025 Msa0521030:intron 45.0%
TCTCTCGAATGATTCCTCCT+AGG - chr3_4:73637054-73637073 Msa0521030:intron 45.0%
CTCTCGAATGATTCCTCCTA+GGG - chr3_4:73637055-73637074 Msa0521030:intron 45.0%
TCTCGAATGATTCCTCCTAG+GGG - chr3_4:73637056-73637075 Msa0521030:intron 45.0%
ACCTCTTGATCCCAATCACT+TGG - chr3_4:73637088-73637107 Msa0521030:intron 45.0%
ACCAAGTGATTGGGATCAAG+AGG + chr3_4:73637092-73637111 None:intergenic 45.0%
! TGTGCACATCACTGATTACC+AGG + chr3_4:73637378-73637397 None:intergenic 45.0%
ACCTTCCCGTCATAAGTAAG+TGG - chr3_4:73637449-73637468 Msa0521030:CDS 45.0%
CCTTCCCGTCATAAGTAAGT+GGG - chr3_4:73637450-73637469 Msa0521030:CDS 45.0%
CTTCCCGTCATAAGTAAGTG+GGG - chr3_4:73637451-73637470 Msa0521030:CDS 45.0%
GATCCCCACTTACTTATGAC+GGG + chr3_4:73637457-73637476 None:intergenic 45.0%
CAGATAATCACAGGCACCAT+GGG + chr3_4:73637647-73637666 None:intergenic 45.0%
GCTGAAACCTGTGAGATTAG+AGG - chr3_4:73637666-73637685 Msa0521030:CDS 45.0%
!! ACTACTTCTGATAGTGGCAG+TGG - chr3_4:73637772-73637791 Msa0521030:CDS 45.0%
TCAGGATGAAGACGAAGATG+AGG - chr3_4:73637858-73637877 Msa0521030:CDS 45.0%
AGATTGATCTGCACTCCCTA+AGG + chr3_4:73638503-73638522 None:intergenic 45.0%
AGGGAATGCCAATGTCCATA+GGG - chr3_4:73638746-73638765 Msa0521030:CDS 45.0%
GAACTAGAGGTGGCAAAACT+TGG + chr3_4:73638874-73638893 None:intergenic 45.0%
! TTTGAGATACCGAGACTTGG+GGG + chr3_4:73638901-73638920 None:intergenic 45.0%
! GTTTGAGATACCGAGACTTG+GGG + chr3_4:73638902-73638921 None:intergenic 45.0%
ACGCACCCTGAAAGAAAACA+CGG - chr3_4:73638940-73638959 Msa0521030:CDS 45.0%
TCTCTATGCTGGATCAAGGT+AGG - chr3_4:73639028-73639047 Msa0521030:CDS 45.0%
AAGGTAGGCACGGTGATAAT+TGG - chr3_4:73639043-73639062 Msa0521030:CDS 45.0%
GAAGCCATGTTATCTGAAGG+AGG + chr3_4:73639144-73639163 None:intergenic 45.0%
! ATTCCTTGGGAGTGCATATC+TGG + chr3_4:73639204-73639223 None:intergenic 45.0%
CCCATACAAATGAAGCATGC+TGG - chr3_4:73639417-73639436 Msa0521030:intron 45.0%
AAGACATACTCCAGTCAGCA+TGG - chr3_4:73639732-73639751 Msa0521030:intron 45.0%
AAGGACATCGAAAGTTACGG+TGG + chr3_4:73639912-73639931 None:intergenic 45.0%
ATGCGATAATTACTCCGACG+GGG - chr3_4:73640183-73640202 Msa0521030:intron 45.0%
ATCTTTCGTTCTGACAGCAG+GGG + chr3_4:73640572-73640591 None:intergenic 45.0%
! TTGGTAGCAACAATCCCTTC+AGG + chr3_4:73640603-73640622 None:intergenic 45.0%
!!! TAAATAAAAATGATTAATTT+TGG + chr3_4:73636044-73636063 None:intergenic 5.0%
CACGCATTCCGATGGGAAAA+CGG + chr3_4:73636161-73636180 None:intergenic 50.0%
CGACGATCCAACTTGTCTCA+TGG - chr3_4:73636194-73636213 Msa0521030:three_prime_UTR 50.0%
ACTAGATCCGAATCTGACCG+TGG + chr3_4:73636251-73636270 None:intergenic 50.0%
TGTTAATCCTCCTGCTCTCG+AGG - chr3_4:73636937-73636956 Msa0521030:intron 50.0%
GTTAATCCTCCTGCTCTCGA+GGG - chr3_4:73636938-73636957 Msa0521030:intron 50.0%
ATTCCGGAGTTTAGTCAGGG+AGG - chr3_4:73636992-73637011 Msa0521030:intron 50.0%
TTCCGCCTGTGAATCAAGCT+CGG - chr3_4:73637029-73637048 Msa0521030:intron 50.0%
AGAACCCGAGCTTGATTCAC+AGG + chr3_4:73637037-73637056 None:intergenic 50.0%
CTCGAATGATTCCTCCTAGG+GGG - chr3_4:73637057-73637076 Msa0521030:intron 50.0%
TCGAATGATTCCTCCTAGGG+GGG - chr3_4:73637058-73637077 Msa0521030:intron 50.0%
TGATGTGCACATGCCTGACA+TGG - chr3_4:73637387-73637406 Msa0521030:CDS 50.0%
! CCCACTTACTTATGACGGGA+AGG + chr3_4:73637453-73637472 None:intergenic 50.0%
GCAGATAATCACAGGCACCA+TGG + chr3_4:73637648-73637667 None:intergenic 50.0%
GAGGCTTCTTCTGAGCTGAT+GGG + chr3_4:73637912-73637931 None:intergenic 50.0%
CATCAGCTCAGAAGAAGCCT+CGG - chr3_4:73637911-73637930 Msa0521030:CDS 50.0%
ATCAGCTCAGAAGAAGCCTC+GGG - chr3_4:73637912-73637931 Msa0521030:CDS 50.0%
! AGAAGAAGCCTCGGGTTGTT+TGG - chr3_4:73637920-73637939 Msa0521030:CDS 50.0%
! CTGCCACCATACTAGCTTGT+TGG + chr3_4:73638480-73638499 None:intergenic 50.0%
CTAGTATGGTGGCAGCCTTA+GGG - chr3_4:73638485-73638504 Msa0521030:intron 50.0%
CCATGCCCGTTAAGACTAGT+TGG + chr3_4:73638613-73638632 None:intergenic 50.0%
!! CCAACTAGTCTTAACGGGCA+TGG - chr3_4:73638610-73638629 Msa0521030:intron 50.0%
! CGGGCATGGATTTTCTCCTT+CGG - chr3_4:73638624-73638643 Msa0521030:intron 50.0%
! GGGCATGGATTTTCTCCTTC+GGG - chr3_4:73638625-73638644 Msa0521030:intron 50.0%
! GGCATGGATTTTCTCCTTCG+GGG - chr3_4:73638626-73638645 Msa0521030:intron 50.0%
TAACGGGAGTTATGGCTGAC+TGG + chr3_4:73638711-73638730 None:intergenic 50.0%
CAGGGAATGCCAATGTCCAT+AGG - chr3_4:73638745-73638764 Msa0521030:CDS 50.0%
CAAAACTTGGCCGTTGATCC+GGG + chr3_4:73638861-73638880 None:intergenic 50.0%
GCAAAACTTGGCCGTTGATC+CGG + chr3_4:73638862-73638881 None:intergenic 50.0%
ACTTGGGGGATGAGAACTAG+AGG + chr3_4:73638887-73638906 None:intergenic 50.0%
AGTTCTCATCCCCCAAGTCT+CGG - chr3_4:73638889-73638908 Msa0521030:CDS 50.0%
CACCCTGAAAGAAAACACGG+AGG - chr3_4:73638943-73638962 Msa0521030:CDS 50.0%
ATGCTGGATCAAGGTAGGCA+CGG - chr3_4:73639033-73639052 Msa0521030:CDS 50.0%
TCAAGCGACGTACCGTTATC+TGG - chr3_4:73639066-73639085 Msa0521030:intron 50.0%
ATATCTGGCAACGAACCACC+AGG + chr3_4:73639189-73639208 None:intergenic 50.0%
TTGCCAGATATGCACTCCCA+AGG - chr3_4:73639198-73639217 Msa0521030:intron 50.0%
CGGTCTTCCCATCCTTGAAA+TGG + chr3_4:73639267-73639286 None:intergenic 50.0%
AGGATGGGAAGACCGTAATC+AGG - chr3_4:73639272-73639291 Msa0521030:CDS 50.0%
GGAAAAACGGCACCGTTAAC+TGG + chr3_4:73639348-73639367 None:intergenic 50.0%
TGTCTGGCCTGGTGGAAAAA+CGG + chr3_4:73639361-73639380 None:intergenic 50.0%
AGGTGGAGCTAGTTGTTGTC+TGG + chr3_4:73639377-73639396 None:intergenic 50.0%
GACAACAACTAGCTCCACCT+TGG - chr3_4:73639377-73639396 Msa0521030:intron 50.0%
GCTCCTGCATGTCATGAACA+TGG + chr3_4:73640129-73640148 None:intergenic 50.0%
CTGTCACAAAGATACCCCGT+CGG + chr3_4:73640200-73640219 None:intergenic 50.0%
TAGCATGTGTCCATGAGAGG+AGG + chr3_4:73640284-73640303 None:intergenic 50.0%
! TCCGGTGACCGTTTTCCCAT+CGG - chr3_4:73636150-73636169 Msa0521030:three_prime_UTR 55.0%
TCCGATGGGAAAACGGTCAC+CGG + chr3_4:73636154-73636173 None:intergenic 55.0%
GCGAGAACACGCATTCCGAT+GGG + chr3_4:73636168-73636187 None:intergenic 55.0%
GGGGAGGCCTCCTAATATTC+CGG - chr3_4:73636976-73636995 Msa0521030:intron 55.0%
TCCGCCTGTGAATCAAGCTC+GGG - chr3_4:73637030-73637049 Msa0521030:intron 55.0%
ACCCGAGCTTGATTCACAGG+CGG + chr3_4:73637034-73637053 None:intergenic 55.0%
GTGCACATGCCTGACATGGA+TGG - chr3_4:73637391-73637410 Msa0521030:CDS 55.0%
CGAGGCTTCTTCTGAGCTGA+TGG + chr3_4:73637913-73637932 None:intergenic 55.0%
TCCACAGACCAAACAACCCG+AGG + chr3_4:73637931-73637950 None:intergenic 55.0%
GCTAGTATGGTGGCAGCCTT+AGG - chr3_4:73638484-73638503 Msa0521030:intron 55.0%
TCCTTCGGGGCTTCTTCAGT+TGG - chr3_4:73638639-73638658 Msa0521030:intron 55.0%
CCTTCGGGGCTTCTTCAGTT+GGG - chr3_4:73638640-73638659 Msa0521030:intron 55.0%
TGGGGGATGAGAACTAGAGG+TGG + chr3_4:73638884-73638903 None:intergenic 55.0%
GGCTTCTTTGCCCTTGCAAG+CGG - chr3_4:73639158-73639177 Msa0521030:intron 55.0%
GCTTCTTTGCCCTTGCAAGC+GGG - chr3_4:73639159-73639178 Msa0521030:intron 55.0%
CTTCTTTGCCCTTGCAAGCG+GGG - chr3_4:73639160-73639179 Msa0521030:intron 55.0%
!!! AACGGTGCCGTTTTTCCACC+AGG - chr3_4:73639351-73639370 Msa0521030:intron 55.0%
CTAGTTGTTGTCTGGCCTGG+TGG + chr3_4:73639369-73639388 None:intergenic 55.0%
GAGCTAGTTGTTGTCTGGCC+TGG + chr3_4:73639372-73639391 None:intergenic 55.0%
! GGCGAGTTCAATGATGGGAC+AGG - chr3_4:73639539-73639558 Msa0521030:intron 55.0%
! CGACGGGGTATCTTTGTGAC+AGG - chr3_4:73640198-73640217 Msa0521030:intron 55.0%
GGCGAGAACACGCATTCCGA+TGG + chr3_4:73636169-73636188 None:intergenic 60.0%
ATCCTCCTGCTCTCGAGGGA+AGG - chr3_4:73636942-73636961 Msa0521030:intron 60.0%
GAGGGAAGGACCCCTCTCAA+GGG - chr3_4:73636956-73636975 Msa0521030:intron 60.0%
AGGGAAGGACCCCTCTCAAG+GGG - chr3_4:73636957-73636976 Msa0521030:intron 60.0%
TAGGAGGCCTCCCCTTGAGA+GGG + chr3_4:73636970-73636989 None:intergenic 60.0%
TTAGGAGGCCTCCCCTTGAG+AGG + chr3_4:73636971-73636990 None:intergenic 60.0%
AGAGGTTAAGGAGCCCCCCT+AGG + chr3_4:73637074-73637093 None:intergenic 60.0%
!! GGCAGTGGACTAAGATCCGC+AGG - chr3_4:73637787-73637806 Msa0521030:CDS 60.0%
! GCCTCGGGTTGTTTGGTCTG+TGG - chr3_4:73637927-73637946 Msa0521030:CDS 60.0%
GAACGTGGCAAGCCATCTCC+AGG - chr3_4:73638329-73638348 Msa0521030:CDS 60.0%
CCCAACTGAAGAAGCCCCGA+AGG + chr3_4:73638643-73638662 None:intergenic 60.0%
CCAGGATACCCCGCTTGCAA+GGG + chr3_4:73639171-73639190 None:intergenic 60.0%
ACCAGGATACCCCGCTTGCA+AGG + chr3_4:73639172-73639191 None:intergenic 60.0%
! TTGCAAGCGGGGTATCCTGG+TGG - chr3_4:73639171-73639190 Msa0521030:intron 60.0%
GTCCTTCCCTCGAGAGCAGG+AGG + chr3_4:73636947-73636966 None:intergenic 65.0%
CGAGGGAAGGACCCCTCTCA+AGG - chr3_4:73636955-73636974 Msa0521030:intron 65.0%
GAAGGACCCCTCTCAAGGGG+AGG - chr3_4:73636960-73636979 Msa0521030:intron 65.0%
AGGAGGCCTCCCCTTGAGAG+GGG + chr3_4:73636969-73636988 None:intergenic 65.0%
GGTTAAGGAGCCCCCCTAGG+AGG + chr3_4:73637071-73637090 None:intergenic 65.0%
! CCCTTGCAAGCGGGGTATCC+TGG - chr3_4:73639168-73639187 Msa0521030:intron 65.0%
GGGGTCCTTCCCTCGAGAGC+AGG + chr3_4:73636950-73636969 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 73636005 73640665 73636005 ID=Msa0521030;Name=Msa0521030
chr3_4 mRNA 73636005 73640665 73636005 ID=Msa0521030-mRNA-1;Parent=Msa0521030;Name=Msa0521030-mRNA-1;_AED=0.05;_eAED=0.05;_QI=136|1|1|1|1|1|6|449|645
chr3_4 exon 73636005 73636525 73636005 ID=Msa0521030-mRNA-1:exon:20727;Parent=Msa0521030-mRNA-1
chr3_4 exon 73637110 73638234 73637110 ID=Msa0521030-mRNA-1:exon:20726;Parent=Msa0521030-mRNA-1
chr3_4 exon 73638320 73638396 73638320 ID=Msa0521030-mRNA-1:exon:20725;Parent=Msa0521030-mRNA-1
chr3_4 exon 73638673 73639071 73638673 ID=Msa0521030-mRNA-1:exon:20724;Parent=Msa0521030-mRNA-1
chr3_4 exon 73639207 73639359 73639207 ID=Msa0521030-mRNA-1:exon:20723;Parent=Msa0521030-mRNA-1
chr3_4 exon 73640418 73640665 73640418 ID=Msa0521030-mRNA-1:exon:20722;Parent=Msa0521030-mRNA-1
chr3_4 five_prime_UTR 73640530 73640665 73640530 ID=Msa0521030-mRNA-1:five_prime_utr;Parent=Msa0521030-mRNA-1
chr3_4 CDS 73640418 73640529 73640418 ID=Msa0521030-mRNA-1:cds;Parent=Msa0521030-mRNA-1
chr3_4 CDS 73639207 73639359 73639207 ID=Msa0521030-mRNA-1:cds;Parent=Msa0521030-mRNA-1
chr3_4 CDS 73638673 73639071 73638673 ID=Msa0521030-mRNA-1:cds;Parent=Msa0521030-mRNA-1
chr3_4 CDS 73638320 73638396 73638320 ID=Msa0521030-mRNA-1:cds;Parent=Msa0521030-mRNA-1
chr3_4 CDS 73637110 73638234 73637110 ID=Msa0521030-mRNA-1:cds;Parent=Msa0521030-mRNA-1
chr3_4 CDS 73636454 73636525 73636454 ID=Msa0521030-mRNA-1:cds;Parent=Msa0521030-mRNA-1
chr3_4 three_prime_UTR 73636005 73636453 73636005 ID=Msa0521030-mRNA-1:three_prime_utr;Parent=Msa0521030-mRNA-1
Gene Sequence

>Msa0521030

ATGGATGATTCCGGTGACCGTTTTCCCATCGGAATGCGTGTTCTCGCCGTTGACGACGATCCAACTTGTCTCATGGTTTTGGAAACTCTTCTCCGTAGATGTCAATACCACGTAACCACAACTAGTCAAGCAATAACAGCGTTGACCATGTTGAGAGAAAACAAAGACAAGTTTGACCTGGTAATCAGTGATGTGCACATGCCTGACATGGATGGATTTAAGCTGCTTGAACTTGTGGGACTTGAAATGGACCTTCCCGTCATAATGTTGTCTGCATATGGTGATACAAAGCTGGTGATGAAAGGAATTTCCCATGGTGCCTGTGATTATCTGCTGAAACCTGTGAGATTAGAGGAGCTAAAGAACATTTGGCAGCATGTAATTAGGAAGAAGAAGTCTGATCCAAAGGAGAAAAACAAAACCAGTAAACCAGACAAAACTACTTCTGATAGTGGCAGTGGACTAAGATCCGCAGGAGCAGAAAATTCAGATGAAAATGGAAAGCTGACTAAGAAAAGAAAGGATCAGGATGAAGACGAAGATGAGGATAAAGAGAATGGTAATGACAACGAGGACCCATCAGCTCAGAAGAAGCCTCGGGTTGTTTGGTCTGTGGAGCTGCACCGCAAGTTTGTTGCTGCTGTTAATCAGTTAGGCATTGACAAGGCTGTGCCCAAAAAAATTCTTGATATGATGAATGTCGAAAATATCACAAGGGAGAACGTGGCAAGCCATCTCCAGAAGTATAGACTTTATCTGAAAAGAATTAGCTGTGTTGCAAACCAACAAGCTAGTATGGTGGCAGCCTTAGGGAGTGCAGATCAATCTTATTTGAGAATGGGTGGTTCTGGACATTTTCACAATAATGCTTTCAGATCCTTTTCACCTAGTGGGATAATTGGTAATCTGAACACTCCAACTAGTCTTAACGGGCATGGATTTTCTCCTTCGGGGCTTCTTCAGTTGGGCCAATCACGTAATTTAAACAATTCTTCCAATGATCAACTTAAATTCCAGTCAGCCATAACTCCCGTTAATCAGAATATTCTTCAGGGAATGCCAATGTCCATAGGGTTTGATCACTTGCAAAACAGCAAGGGTGTTATCTCTGTTCAAAACCTGAATACTGATGTGAAAACAACTTTTCCCATCCCAAATAAATTCCCGGATCAACGGCCAAGTTTTGCCACCTCTAGTTCTCATCCCCCAAGTCTCGGTATCTCAAACAATGGCTTGATGTCGGATACGCACCCTGAAAGAAAACACGGAGGTATAGGAATAGGATATGGAAGTTCATCTTCTTCAGTAGCCTCTCAACATTCAGAATTTTCTTTCTCTATGCTGGATCAAGGTAGGCACGGTGATAATTGGTCAAGCGACGTACCGTTATCTGGAATCCAAACAAATTCTTTCTCTTCAAGTGAATGTTTTAGACAGACAGCTGTTCCTCCTTCAGATAACATGGCTTCTTTGCCCTTGCAAGCGGGGTATCCTGGTGGTTCGTTGCCAGATATGCACTCCCAAGGAATGATTTTTACTAATTCACCTGAGTATATAAACGGTAATTTGCCATTTCAAGGATGGGAAGACCGTAATCAGGATGCTACTTACCACTCAAATGTTACTTGTGGATCAATGAACTCTCTTGCTCCAGTTAACGGTGCCGTTTTTCCACCAGGCCAGACAACAACTAGCTCCACCTTGGATACTAAATTTTTTAATCCCATACAAATGAAGCATGCTGGATTTGCCGAGTTAACTGAATGCAGCTCATCAAGACAATCTCCAGCTAATATCATAAGCCAGCAGAAGTTTTCTAATAATCTTGGTTCACTGGAATACTTGGCGAGTTCAATGATGGGACAGGAGCAAGATAAGATGAAATTATTGGGTGGAGACTTCATATGCGATAATTACTCCGACGGGGTATCTTTGTGA
Protein sequence

>Msa0521030

MDDSGDRFPIGMRVLAVDDDPTCLMVLETLLRRCQYHVTTTSQAITALTMLRENKDKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSAYGDTKLVMKGISHGACDYLLKPVRLEELKNIWQHVIRKKKSDPKEKNKTSKPDKTTSDSGSGLRSAGAENSDENGKLTKKRKDQDEDEDEDKENGNDNEDPSAQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDMMNVENITRENVASHLQKYRLYLKRISCVANQQASMVAALGSADQSYLRMGGSGHFHNNAFRSFSPSGIIGNLNTPTSLNGHGFSPSGLLQLGQSRNLNNSSNDQLKFQSAITPVNQNILQGMPMSIGFDHLQNSKGVISVQNLNTDVKTTFPIPNKFPDQRPSFATSSSHPPSLGISNNGLMSDTHPERKHGGIGIGYGSSSSSVASQHSEFSFSMLDQGRHGDNWSSDVPLSGIQTNSFSSSECFRQTAVPPSDNMASLPLQAGYPGGSLPDMHSQGMIFTNSPEYINGNLPFQGWEDRNQDATYHSNVTCGSMNSLAPVNGAVFPPGQTTTSSTLDTKFFNPIQMKHAGFAELTECSSSRQSPANIISQQKFSNNLGSLEYLASSMMGQEQDKMKLLGGDFICDNYSDGVSL*